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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020910 Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence 0 crisprs csa3,RT 0 0 3 0
NZ_CP020911 Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence 0 crisprs csa3,PD-DExK 0 0 0 0
NZ_CP020906 Rhizobium etli strain NXC12 chromosome, complete genome 0 crisprs WYL,cas3,csa3,DEDDh 0 0 5 0
NZ_CP020909 Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence 0 crisprs csa3,DEDDh 0 0 0 0
NZ_CP020908 Rhizobium etli strain NXC12 plasmid pRetNXC12b, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP020907 Rhizobium etli strain NXC12 plasmid pRetNXC12a, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP020910
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3441 : 68798 55 Salmonella_phage(30.0%) transposase,integrase attL 1433:1446|attR 8160:8173
DBSCAN-SWA_2 160868 : 202312 25 Klosneuvirus(25.0%) transposase,integrase attL 184317:184344|attR 187689:187716
DBSCAN-SWA_3 221854 : 260846 32 Paenibacillus_phage(28.57%) transposase,integrase attL 224917:224944|attR 228289:228316
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP020906
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1099647 : 1150130 55 Brucella_phage(18.18%) tail,capsid,terminase,holin,transposase,protease NA
DBSCAN-SWA_2 1551530 : 1560750 9 Escherichia_phage(25.0%) NA NA
DBSCAN-SWA_3 1873457 : 1886549 13 uncultured_Mediterranean_phage(90.91%) tRNA NA
DBSCAN-SWA_4 2110018 : 2120150 7 uncultured_Mediterranean_phage(83.33%) NA NA
DBSCAN-SWA_5 3848750 : 3858808 9 Mycobacterium_phage(25.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage