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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP021059 Macrococcus canis strain KM 45013 chromosome, complete genome 5 crisprs WYL,csa3,RT,cas3,DEDDh,DinG 4 0 7 0

Results visualization

1. NZ_CP021059
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021059_1 873154-873299 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021059_2 1747939-1748044 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021059_3 2007868-2007952 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021059_4 2055508-2055584 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021059_5 2153490-2153956 Orphan NA
8 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP021059_3 3.1|2007891|39|NZ_CP021059|CRISPRCasFinder 2007891-2007929 39 NZ_CP021059.1 2006225-2006263 1 0.974
NZ_CP021059_4 4.1|2055537|19|NZ_CP021059|CRISPRCasFinder 2055537-2055555 19 NZ_CP021059.1 41063-41081 2 0.895
NZ_CP021059_5 5.3|2153633|19|NZ_CP021059|CRT 2153633-2153651 19 NZ_CP021059.1 2154443-2154461 2 0.895
NZ_CP021059_5 5.4|2153687|19|NZ_CP021059|CRT 2153687-2153705 19 NZ_CP021059.1 2154443-2154461 2 0.895

1. spacer 3.1|2007891|39|NZ_CP021059|CRISPRCasFinder matches to position: 2006225-2006263, mismatch: 1, identity: 0.974

tacgagccacttcgctcacttcaaaggactctcaccttt	CRISPR spacer
tacgagccacttcactcacttcaaaggactctcaccttt	Protospacer
*************.*************************

2. spacer 4.1|2055537|19|NZ_CP021059|CRISPRCasFinder matches to position: 41063-41081, mismatch: 2, identity: 0.895

tgttggactggtgcttgga	CRISPR spacer
tggtggacaggtgcttgga	Protospacer
** ***** **********

3. spacer 5.3|2153633|19|NZ_CP021059|CRT matches to position: 2154443-2154461, mismatch: 2, identity: 0.895

tgcactgatactgatgctt	CRISPR spacer
tgcactgatacttatactt	Protospacer
************ **.***

4. spacer 5.4|2153687|19|NZ_CP021059|CRT matches to position: 2154443-2154461, mismatch: 2, identity: 0.895

tgcactgatactcgtactt	CRISPR spacer
tgcactgatacttatactt	Protospacer
************..*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 629028 : 637673 7 Acinetobacter_phage(33.33%) NA NA
DBSCAN-SWA_2 850877 : 859268 9 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 1320694 : 1343478 27 Staphylococcus_phage(22.22%) tail,terminase,capsid NA
DBSCAN-SWA_4 1347741 : 1360725 26 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_5 1473816 : 1551467 90 Staphylococcus_phage(28.26%) holin,protease,portal,tail,tRNA,terminase,capsid NA
DBSCAN-SWA_6 1717100 : 1724408 8 Staphylococcus_phage(71.43%) NA NA
DBSCAN-SWA_7 1772575 : 1781888 10 Staphylococcus_phage(85.71%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage