CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015574	Salmonella enterica strain FORC_038, complete genome	2 crisprs	PD-DExK,cas4,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,cas14j	0	24	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015574_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015574_1

953802-954806

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

16 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP015574_1

>merge|NZ_CP015574|1|953802-954806|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTGTTTAATTCTAAAACGGGACAAATGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAACAACCATTCCCTCAATGAACGGGTTATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGACAGGCCTGCCAGTCGGGCAATATCCGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGACGGCCTGGCAGCGCGTGACGTTATTAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGGCTGGTACTGTGCGCCATAAAGACGCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGACCACAATCAGGGAACTGATCCAGCGTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCAGATTGTCGCTTTTTGTTGCTGCCATTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCATTATTAATGGCGTTGATGTTCTGGCGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTATCAACTAATTCGTTCCTTGACACTCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTACCGCGACACCGTCAACGACAGCAACCACTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTCACTAAAATTTGTAGGGTTATCCACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGCAATTGCAGTTTGACGCGGTGCTGTCATTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGTTTGTGGCGTCAGTAATACTATTATCGGTGTGTTCCCCGCGCTAGCGGGGATAAACCGTTTTTAAATCCGGACAGACCCTGTAACGGATCGTGTTCCCCGCGCCAGCGGGGATAAACCGATCCGACTGTATGCCCAGCAGAACGAGGGCGCGTGTTCCCCGCGCTAGCGGGGATAAACCGCACGAGTGGCAAATTGATTTCGACGAAAAACCGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP015574|1|1|953802-954745|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTTTAATTCTAAAACGGGACAAATGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAACAACCATTCCCTCAATGAACGGGTTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGACAGGCCTGCCAGTCGGGCAATATCCGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGGCCTGGCAGCGCGTGACGTTATTAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGCTGGTACTGTGCGCCATAAAGACGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGACCACAATCAGGGAACTGATCCAGCGTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGATTGTCGCTTTTTGTTGCTGCCATTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCATTATTAATGGCGTTGATGTTCTGGCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTATCAACTAATTCGTTCCTTGACACTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCGCGACACCGTCAACGACAGCAACCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTCACTAAAATTTGTAGGGTTATCCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCAATTGCAGTTTGACGCGGTGCTGTCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTTTGTGGCGTCAGTAATACTATTATCGGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTTTTAAATCCGGACAGACCCTGTAACGGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGACTGTATGCCCAGCAGAACGAGGGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG

>NZ_CP015574|1|1|953802-954806|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTTTAATTCTAAAACGGGACAAATGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAACAACCATTCCCTCAATGAACGGGTTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGACAGGCCTGCCAGTCGGGCAATATCCGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGGCCTGGCAGCGCGTGACGTTATTAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGCTGGTACTGTGCGCCATAAAGACGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGACCACAATCAGGGAACTGATCCAGCGTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGATTGTCGCTTTTTGTTGCTGCCATTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCATTATTAATGGCGTTGATGTTCTGGCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTATCAACTAATTCGTTCCTTGACACTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCGCGACACCGTCAACGACAGCAACCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTCACTAAAATTTGTAGGGTTATCCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCAATTGCAGTTTGACGCGGTGCTGTCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTTTGTGGCGTCAGTAATACTATTATCGGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTTTTAAATCCGGACAGACCCTGTAACGGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGACTGTATGCCCAGCAGAACGAGGGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CACGAGTGGCAAATTGATTTCGACGAAAAACC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP015574|1|1|953802-954806|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTTTAATTCTAAAACGGGACAAATGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAACAACCATTCCCTCAATGAACGGGTTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGACAGGCCTGCCAGTCGGGCAATATCCGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGGCCTGGCAGCGCGTGACGTTATTAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGCTGGTACTGTGCGCCATAAAGACGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGACCACAATCAGGGAACTGATCCAGCGTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGATTGTCGCTTTTTGTTGCTGCCATTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCATTATTAATGGCGTTGATGTTCTGGCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTATCAACTAATTCGTTCCTTGACACTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCGCGACACCGTCAACGACAGCAACCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTCACTAAAATTTGTAGGGTTATCCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCAATTGCAGTTTGACGCGGTGCTGTCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTTTGTGGCGTCAGTAATACTATTATCGGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTTTTAAATCCGGACAGACCCTGTAACGGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGACTGTATGCCCAGCAGAACGAGGGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CACGAGTGGCAAATTGATTTCGACGAAAAACC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015574.1\|WP_000029735.1\|962518_965182_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP015574.1\|WP_000080404.1\|960174_960909_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP015574.1\|WP_000368585.1\|965193_966750_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP015574.1\|WP_000210451.1\|948651_949452_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP015574.1\|WP_001208002.1\|954903_955701_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP015574.1\|WP_000178267.1\|943365_943872_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP015574.1\|WP_000210863.1\|949679_951317_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP015574.1\|WP_000981790.1\|944677_947377_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP015574.1\|WP_000210925.1\|956587_958387_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP015574.1\|WP_000108313.1\|955790_956153_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP015574.1\|WP_000117946.1\|966746_967307_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP015574.1\|WP_001145544.1\|961121_962075_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP015574.1\|WP_001290661.1\|958386_960099_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP015574.1\|WP_000036734.1\|951399_952698_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP015574.1\|WP_000816751.1\|942880_943351_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP015574.1\|WP_001079646.1\|942347_942884_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP015574.1\|WP_000842511.1\|947456_948044_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP015574.1\|WP_000206414.1\|967320_968379_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP015574.1\|WP_001044460.1\|943891_944665_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP015574.1\|WP_001199961.1\|952833_953505_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126

Protein	Function_ID	Function_description	E-value
NZ_CP015574.1\|WP_000029735.1\|962518_965182_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP015574.1\|WP_000080404.1\|960174_960909_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP015574.1\|WP_000368585.1\|965193_966750_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP015574.1\|WP_000210451.1\|948651_949452_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP015574.1\|WP_001208002.1\|954903_955701_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.39566e-102
NZ_CP015574.1\|WP_000178267.1\|943365_943872_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	7.03659e-105
NZ_CP015574.1\|WP_000210863.1\|949679_951317_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP015574.1\|WP_000981790.1\|944677_947377_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP015574.1\|WP_000210925.1\|956587_958387_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP015574.1\|WP_000108313.1\|955790_956153_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP015574.1\|WP_000117946.1\|966746_967307_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP015574.1\|WP_001145544.1\|961121_962075_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP015574.1\|WP_001290661.1\|958386_960099_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP015574.1\|WP_000036734.1\|951399_952698_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP015574.1\|WP_000816751.1\|942880_943351_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	2.05552e-100
NZ_CP015574.1\|WP_001079646.1\|942347_942884_-\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	7.785e-121
NZ_CP015574.1\|WP_000842511.1\|947456_948044_-\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	6.76622e-100
NZ_CP015574.1\|WP_000206414.1\|967320_968379_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	3.17298e-133
NZ_CP015574.1\|WP_001044460.1\|943891_944665_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP015574.1\|WP_001199961.1\|952833_953505_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155

>NZ_CP015574.1|WP_001199961.1|952833_953505_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP015574.1|WP_000036734.1|951399_952698_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP015574.1|WP_000210863.1|949679_951317_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP015574.1|WP_000210451.1|948651_949452_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP015574.1|WP_000842511.1|947456_948044_-|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDSILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP015574.1|WP_000981790.1|944677_947377_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGSGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPTTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP015574.1|WP_001044460.1|943891_944665_-|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGSSLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP015574.1|WP_000178267.1|943365_943872_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP015574.1|WP_000816751.1|942880_943351_-|fimbrial-protein
MKRALILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP015574.1|WP_001079646.1|942347_942884_-|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGEEVMPGEFSGSATVSFEYQ
>NZ_CP015574.1|WP_001208002.1|954903_955701_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP015574.1|WP_000108313.1|955790_956153_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP015574.1|WP_000210925.1|956587_958387_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP015574.1|WP_001290661.1|958386_960099_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDQLIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP015574.1|WP_000080404.1|960174_960909_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP015574.1|WP_001145544.1|961121_962075_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP015574.1|WP_000029735.1|962518_965182_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGENDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELIAQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP015574.1|WP_000368585.1|965193_966750_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLRADALHKALAPLEHAFQFGPESPSFMQDFEPLTGEKVSIASLLPETPGVQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPSGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDAAIFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFTNAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRRYFDDRVFTNPYESSDLKRIMTARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP015574.1|WP_000117946.1|966746_967307_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP015574.1|WP_000206414.1|967320_968379_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKAKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA

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Crispr_ID: NZ_CP015574_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015574_2

971075-973117

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCNAGCGGGGATAAACCG	CRT

33 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP015574_2

>merge|NZ_CP015574|2|971075-973117|CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGCTCTATTGTGCACGTGCTGGCGCTTACGGTGTTCCCCGCGCCAGCGGGGATAAACCGCACATGCACCTTTTGAGCCAGTAATTGACAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTGGAAAAGACAACAATATATTGGTAAATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCACGTACTAGTGACGACATAGACAGACTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCGGGACCCCGCGATTTTCTCCCTGACGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTGTGTTGCTCTTTGAATTGCTGCGCCATAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTCTCCCCTGTAATTGTGACGCTGTCATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGTAATACATCATCACGCACAATGACCATCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATATCCGCCTCAACTACTACGAGGGTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTCGTCGGAGCTGGTGGACGTACTGGAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGACACAATACAGCGTATCCACCCCTGAAGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGAGGTTGAGCCGCAAAAGATTGTGACTGATGTGTTCCCCGCGCCAGCGGGGATAAACCGTAGGCTTCTTTCAGCCTGGCGGCTCGTTTACCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATGTTGCACTCACCTCTCTCGCCACAAAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGTAACTCACGTTTGCGAGCTTCCATCTGTGCCGGTGTTCCCCGCGCTAGCGGGGATAAACCGCCGCGCTGGGCCAGCCGCATAACGCTGGAAATGTGTTCCCCGCGCTAGCGGGGATAAACCGAAAATGAACTCACCGCCTACAAAGACCAGTTGGTGTTCCCCGCGCTAGCGGGGATAAACCGCCAATACGTATACTGACAACAGTATTACTGACGTGTTCCCCGCGCTAGCGGGGATAAACCGTACGCCCCGAACGCGGGGCTGGCTGCTGACCAGTGTTCCCCGCGCTAGCGGGGATAAACCGGTAATCCGCGCTTACGATACAATGATGGTCGCGTGTTCCCCGCGCTAGCGGGGATAAACCGACGACGAATGCAGCGCAGACTACTGGCGCTGACGTGTTCCCCGCGCTAGCGGGGATAAACCGGCGCTATTCCTACCCCCACACCCCGATCCCCCGTGTTCCCCGCGCTAGCGGGGATAAACCGCCGCGCCTTATCGTCGTACATACCCGGCGGTAGTGTTCCCCGCGCTAGCGGGGATAAACCGAAAATTGTATCATGTTTGGATTGCTGACAGATGTGTTCCCCGCGCTAGCGGGGATAAACCGGCTGAGTAGGAACACATATTAACCGGCCCTTCGTGTTCCCCGCGCTAGCGGGGATAAACCGCGAAAAAACGGGCGCTGCGGGTCATTTTCGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGATCCGCGCCTTTCCACGCTTAAACGTTACGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGTACTGATCATCTTCCAGCCCGGCAAACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTCTTCCAGCACATCCTGCGGCTGCACGACGTGTTCCCCGCGCCAGCGGGGATAAACCGTCACGCGGGCCCCCTTATTGGGTCGGGCAGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCAACTGGGCGATCATCTGGGCGCTGTTTATGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCTGATATTGTTCGCGCAGATCGTCGTACTGGTGTTCCCCGCGCCAGCGGGGATAAGTCGAGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAAATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP015574|2|2|971075-973117|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGCTCTATTGTGCACGTGCTGGCGCTTACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACATGCACCTTTTGAGCCAGTAATTGACAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGGAAAAGACAACAATATATTGGTAAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCACGTACTAGTGACGACATAGACAGACTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCGGGACCCCGCGATTTTCTCCCTGACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTGTGTTGCTCTTTGAATTGCTGCGCCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTCTCCCCTGTAATTGTGACGCTGTCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTAATACATCATCACGCACAATGACCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATATCCGCCTCAACTACTACGAGGGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTCGTCGGAGCTGGTGGACGTACTGGAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACACAATACAGCGTATCCACCCCTGAAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGAGGTTGAGCCGCAAAAGATTGTGACTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGGCTTCTTTCAGCCTGGCGGCTCGTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATGTTGCACTCACCTCTCTCGCCACAAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAACTCACGTTTGCGAGCTTCCATCTGTGCCG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGCGCTGGGCCAGCCGCATAACGCTGGAAAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAAATGAACTCACCGCCTACAAAGACCAGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCAATACGTATACTGACAACAGTATTACTGAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TACGCCCCGAACGCGGGGCTGGCTGCTGACCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTAATCCGCGCTTACGATACAATGATGGTCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACGACGAATGCAGCGCAGACTACTGGCGCTGAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCGCTATTCCTACCCCCACACCCCGATCCCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGCGCCTTATCGTCGTACATACCCGGCGGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAAATTGTATCATGTTTGGATTGCTGACAGAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCTGAGTAGGAACACATATTAACCGGCCCTTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGAAAAAACGGGCGCTGCGGGTCATTTTCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCGCCTTTCCACGCTTAAACGTTACGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTACTGATCATCTTCCAGCCCGGCAAACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCTTCCAGCACATCCTGCGGCTGCACGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACGCGGGCCCCCTTATTGGGTCGGGCAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAACTGGGCGATCATCTGGGCGCTGTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTGATATTGTTCGCGCAGATCGTCGTACTG
GTGTTCCCCGCGCCAGCGGGGATAAGTCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP015574|2|2|971075-973117|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGCTCTATTGTGCACGTGCTGGCGCTTACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACATGCACCTTTTGAGCCAGTAATTGACAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGGAAAAGACAACAATATATTGGTAAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCACGTACTAGTGACGACATAGACAGACTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCGGGACCCCGCGATTTTCTCCCTGACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTGTGTTGCTCTTTGAATTGCTGCGCCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTCTCCCCTGTAATTGTGACGCTGTCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTAATACATCATCACGCACAATGACCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATATCCGCCTCAACTACTACGAGGGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTCGTCGGAGCTGGTGGACGTACTGGAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACACAATACAGCGTATCCACCCCTGAAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGAGGTTGAGCCGCAAAAGATTGTGACTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGGCTTCTTTCAGCCTGGCGGCTCGTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATGTTGCACTCACCTCTCTCGCCACAAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAACTCACGTTTGCGAGCTTCCATCTGTGCCG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGCGCTGGGCCAGCCGCATAACGCTGGAAAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAAATGAACTCACCGCCTACAAAGACCAGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCAATACGTATACTGACAACAGTATTACTGAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TACGCCCCGAACGCGGGGCTGGCTGCTGACCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTAATCCGCGCTTACGATACAATGATGGTCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACGACGAATGCAGCGCAGACTACTGGCGCTGAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCGCTATTCCTACCCCCACACCCCGATCCCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGCGCCTTATCGTCGTACATACCCGGCGGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAAATTGTATCATGTTTGGATTGCTGACAGAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCTGAGTAGGAACACATATTAACCGGCCCTTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGAAAAAACGGGCGCTGCGGGTCATTTTCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCGCCTTTCCACGCTTAAACGTTACGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTACTGATCATCTTCCAGCCCGGCAAACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCTTCCAGCACATCCTGCGGCTGCACGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACGCGGGCCCCCTTATTGGGTCGGGCAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAACTGGGCGATCATCTGGGCGCTGTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTGATATTGTTCGCGCAGATCGTCGTACTG
GTGTTCCCCGCGCCAGCGGGGATAAGTCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015574.1\|WP_000117946.1\|966746_967307_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP015574.1\|WP_000281479.1\|969117_969768_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP015574.1\|WP_000368585.1\|965193_966750_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP015574.1\|WP_001145544.1\|961121_962075_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP015574.1\|WP_001173664.1\|976772_977378_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP015574.1\|WP_000080404.1\|960174_960909_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP015574.1\|WP_001092255.1\|975346_976786_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP015574.1\|WP_000517480.1\|977942_978254_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP015574.1\|WP_001219244.1\|978982_979462_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP015574.1\|WP_001118110.1\|977395_977752_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP015574.1\|WP_000490481.1\|973131_974178_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP015574.1\|WP_000134250.1\|979458_980508_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP015574.1\|WP_000029735.1\|962518_965182_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP015574.1\|WP_000085112.1\|968389_969136_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP015574.1\|WP_000144830.1\|969764_970685_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP015574.1\|WP_000372384.1\|974428_975337_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP015574.1\|WP_001221538.1\|980488_981250_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP015574.1\|WP_000741649.1\|978272_978983_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP015574.1\|WP_001518648.1\|970684_970978_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP015574.1\|WP_000206414.1\|967320_968379_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843

Protein	Function_ID	Function_description	E-value
NZ_CP015574.1\|WP_000117946.1\|966746_967307_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP015574.1\|WP_000281479.1\|969117_969768_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	2.26872e-74
NZ_CP015574.1\|WP_000368585.1\|965193_966750_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP015574.1\|WP_001145544.1\|961121_962075_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP015574.1\|WP_001173664.1\|976772_977378_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.11365e-145
NZ_CP015574.1\|WP_000080404.1\|960174_960909_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP015574.1\|WP_001092255.1\|975346_976786_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP015574.1\|WP_000517480.1\|977942_978254_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP015574.1\|WP_001219244.1\|978982_979462_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP015574.1\|WP_001118110.1\|977395_977752_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	9.96163e-49
NZ_CP015574.1\|WP_000490481.1\|973131_974178_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP015574.1\|WP_000134250.1\|979458_980508_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP015574.1\|WP_000029735.1\|962518_965182_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP015574.1\|WP_000085112.1\|968389_969136_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	6.76499e-48
NZ_CP015574.1\|WP_000144830.1\|969764_970685_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.63116e-157
NZ_CP015574.1\|WP_000372384.1\|974428_975337_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP015574.1\|WP_001221538.1\|980488_981250_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP015574.1\|WP_000741649.1\|978272_978983_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP015574.1\|WP_001518648.1\|970684_970978_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP015574.1\|WP_000206414.1\|967320_968379_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	3.17298e-133

>NZ_CP015574.1|WP_001518648.1|970684_970978_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP015574.1|WP_000144830.1|969764_970685_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP015574.1|WP_000281479.1|969117_969768_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPMLSAGQTLRFNLRANPTVCKNGKRHDLLMETKRQRKTQGDSQDIWSYQQQAALEWLARQGEQNGFTLRETSVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVLNDPVLFLRRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP015574.1|WP_000085112.1|968389_969136_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP015574.1|WP_000206414.1|967320_968379_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKAKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP015574.1|WP_000117946.1|966746_967307_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP015574.1|WP_000368585.1|965193_966750_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLRADALHKALAPLEHAFQFGPESPSFMQDFEPLTGEKVSIASLLPETPGVQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPSGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDAAIFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFTNAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRRYFDDRVFTNPYESSDLKRIMTARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP015574.1|WP_000029735.1|962518_965182_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGENDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELIAQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP015574.1|WP_001145544.1|961121_962075_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP015574.1|WP_000080404.1|960174_960909_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP015574.1|WP_000490481.1|973131_974178_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP015574.1|WP_000372384.1|974428_975337_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP015574.1|WP_001092255.1|975346_976786_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPMEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP015574.1|WP_001173664.1|976772_977378_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARSGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP015574.1|WP_001118110.1|977395_977752_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLVVGALFGALFIWLLG
>NZ_CP015574.1|WP_000517480.1|977942_978254_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP015574.1|WP_000741649.1|978272_978983_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP015574.1|WP_001219244.1|978982_979462_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP015574.1|WP_000134250.1|979458_980508_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKYAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP015574.1|WP_001221538.1|980488_981250_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015574_2	2.8\|971531\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971531-971562	32	KC911857	Salmonella phage SPC32N, complete genome	10605-10636	1	0.969
NZ_CP015574_2	2.8\|971531\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971531-971562	32	KC911856	Salmonella phage SPC32H, complete genome	10605-10636	1	0.969
NZ_CP015574_2	2.8\|971531\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971531-971562	32	NC_016761	Salmonella phage SPN1S, complete genome	10633-10664	1	0.969
NZ_CP015574_2	2.8\|971531\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971531-971562	32	JQ691610	Salmonella phage SPN9TCW, complete genome	10634-10665	1	0.969
NZ_CP015574_2	2.8\|971531\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971531-971562	32	NC_004775	Enterobacteria phage epsilon15, complete genome	10362-10393	1	0.969
NZ_CP015574_2	2.29\|972813\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972813-972844	32	NZ_CP025114	Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence	203225-203256	4	0.875
NZ_CP015574_2	2.29\|972813\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972813-972844	32	NZ_CP044544	Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence	175311-175342	4	0.875
NZ_CP015574_2	2.5\|971348\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971348-971379	32	NZ_CP039589	Salmonella enterica subsp. enterica strain 10C0710427 plasmid p11-0230.1, complete sequence	1122-1153	5	0.844
NZ_CP015574_1	1.2\|953892\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953892-953923	32	MK448804	Streptococcus phage Javan553, complete genome	14136-14167	6	0.812
NZ_CP015574_1	1.2\|953892\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953892-953923	32	MK448815	Streptococcus phage Javan585, complete genome	14739-14770	6	0.812
NZ_CP015574_1	1.10\|954380\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954380-954411	32	NZ_CP018865	Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence	205587-205618	6	0.812
NZ_CP015574_2	2.6\|971409\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971409-971440	32	NZ_CP018683	Vibrio harveyi isolate QT520 plasmid p2, complete sequence	58866-58897	6	0.812
NZ_CP015574_2	2.6\|971409\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971409-971440	32	NZ_CP018684	Vibrio harveyi isolate QT520 plasmid p3, complete sequence	29837-29868	6	0.812
NZ_CP015574_2	2.31\|972935\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972935-972966	32	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	27531-27562	6	0.812
NZ_CP015574_2	2.17\|972080\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972080-972111	32	NZ_CP034365	Pantoea sp. CCBC3-3-1 plasmid unnamed2, complete sequence	9380-9411	7	0.781
NZ_CP015574_2	2.19\|972202\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972202-972233	32	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	590339-590370	7	0.781
NZ_CP015574_2	2.21\|972324\|33\|NZ_CP015574\|CRISPRCasFinder,CRT	972324-972356	33	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	1684240-1684272	7	0.788
NZ_CP015574_2	2.28\|972752\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972752-972783	32	NC_019542	Pectobacterium phage PP1, complete genome	16404-16435	7	0.781
NZ_CP015574_2	2.28\|972752\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972752-972783	32	KY744566	Pectobacterium phage POP72, complete genome	15583-15614	7	0.781
NZ_CP015574_2	2.29\|972813\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972813-972844	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	652521-652552	7	0.781
NZ_CP015574_1	1.1\|953831\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953831-953862	32	MN694392	Marine virus AFVG_250M8, complete genome	32115-32146	8	0.75
NZ_CP015574_1	1.1\|953831\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953831-953862	32	NC_021722	Lactobacillus paracasei strain LOCK919 plasmid pLOCK919, complete sequence	317-348	8	0.75
NZ_CP015574_1	1.1\|953831\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953831-953862	32	NZ_CP035564	Lactobacillus paracasei strain SRCM103299 plasmid unnamed1	64900-64931	8	0.75
NZ_CP015574_1	1.1\|953831\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953831-953862	32	NZ_CP029537	Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence	34779-34810	8	0.75
NZ_CP015574_1	1.1\|953831\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953831-953862	32	NZ_CP017263	Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.22, complete sequence	24727-24758	8	0.75
NZ_CP015574_1	1.3\|953953\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953953-953984	32	NZ_CP045385	Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence	185018-185049	8	0.75
NZ_CP015574_1	1.10\|954380\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954380-954411	32	NZ_CP015738	Shinella sp. HZN7 plasmid pShin-02, complete sequence	176307-176338	8	0.75
NZ_CP015574_1	1.10\|954380\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954380-954411	32	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	332281-332312	8	0.75
NZ_CP015574_1	1.14\|954624\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954624-954655	32	NZ_CP025224	Enterococcus sp. CR-Ec1 plasmid pCREc1, complete sequence	62016-62047	8	0.75
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1655546-1655577	8	0.75
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1565948-1565979	8	0.75
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1565949-1565980	8	0.75
NZ_CP015574_2	2.3\|971226\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971226-971257	32	NC_010539	Crocosphaera subtropica ATCC 51142 plasmid A, complete sequence	25786-25817	8	0.75
NZ_CP015574_2	2.5\|971348\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971348-971379	32	NC_018146	Zymomonas mobilis subsp. mobilis ATCC 29191 plasmid pZZ6.01, complete sequence	9750-9781	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	390353-390384	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	65703-65734	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	65704-65735	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	65280-65311	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	65702-65733	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	68582-68613	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	66901-66932	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	65701-65732	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	65477-65508	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	68569-68600	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	65704-65735	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	66901-66932	8	0.75
NZ_CP015574_2	2.15\|971958\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971958-971989	32	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	68582-68613	8	0.75
NZ_CP015574_2	2.16\|972019\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972019-972050	32	NZ_CP041045	Paracoccus sp. AK26 plasmid pAK1, complete sequence	206371-206402	8	0.75
NZ_CP015574_2	2.19\|972202\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972202-972233	32	NZ_CP017079	Novosphingobium resinovorum strain SA1 plasmid pSA4, complete sequence	17999-18030	8	0.75
NZ_CP015574_2	2.19\|972202\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972202-972233	32	NZ_AP017660	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_6	48864-48895	8	0.75
NZ_CP015574_2	2.19\|972202\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972202-972233	32	NZ_CP013073	Sphingobium indicum B90A plasmid pSRL3, complete sequence	30908-30939	8	0.75
NZ_CP015574_2	2.19\|972202\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972202-972233	32	NZ_CP012703	Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge plasmid 3, complete sequence	22207-22238	8	0.75
NZ_CP015574_2	2.19\|972202\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972202-972233	32	NZ_CP005090	Sphingobium sp. TKS plasmid pTK6, complete sequence	25709-25740	8	0.75
NZ_CP015574_2	2.19\|972202\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972202-972233	32	NC_020544	Sphingomonas sp. MM-1 plasmid pISP3, complete sequence	23281-23312	8	0.75
NZ_CP015574_2	2.19\|972202\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972202-972233	32	NZ_CP013266	Sphingobium baderi strain DE-13 plasmid pDE2, complete sequence	74069-74100	8	0.75
NZ_CP015574_2	2.26\|972630\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972630-972661	32	CP000663	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence	191544-191575	8	0.75
NZ_CP015574_2	2.28\|972752\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972752-972783	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	740946-740977	8	0.75
NZ_CP015574_2	2.29\|972813\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972813-972844	32	MN693845	Marine virus AFVG_250M833, complete genome	19929-19960	8	0.75
NZ_CP015574_2	2.29\|972813\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972813-972844	32	CP053333	Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence	45977-46008	8	0.75
NZ_CP015574_1	1.1\|953831\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953831-953862	32	JX181825	Salmonella phage STML-198, complete genome	39770-39801	9	0.719
NZ_CP015574_1	1.3\|953953\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953953-953984	32	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	411702-411733	9	0.719
NZ_CP015574_1	1.6\|954136\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954136-954167	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1880026-1880057	9	0.719
NZ_CP015574_1	1.6\|954136\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954136-954167	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1756413-1756444	9	0.719
NZ_CP015574_1	1.6\|954136\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954136-954167	32	NZ_CP022727	Erwinia persicina strain B64 plasmid pEP2, complete sequence	121142-121173	9	0.719
NZ_CP015574_1	1.10\|954380\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954380-954411	32	AP018399	Xanthomonas phage XacN1 DNA, complete genome	89668-89699	9	0.719
NZ_CP015574_1	1.10\|954380\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954380-954411	32	NC_030917	Gordonia phage OneUp, complete genome	3597-3628	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1578348-1578379	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1496565-1496596	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1568471-1568502	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1495587-1495618	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1496557-1496588	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1495910-1495941	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1496547-1496578	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1578515-1578546	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1578498-1578529	9	0.719
NZ_CP015574_1	1.16\|954746\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	954746-954777	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1578478-1578509	9	0.719
NZ_CP015574_2	2.6\|971409\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971409-971440	32	NZ_CP018682	Vibrio harveyi isolate QT520 plasmid p1, complete sequence	70243-70274	9	0.719
NZ_CP015574_2	2.6\|971409\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971409-971440	32	NZ_CP021170	Paenibacillus bovis strain BD3526 plasmid unnamed1, complete sequence	40147-40178	9	0.719
NZ_CP015574_2	2.13\|971836\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971836-971867	32	NC_010865	Sinorhizobium meliloti plasmid pSmeSM11b, complete sequence	104929-104960	9	0.719
NZ_CP015574_2	2.13\|971836\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971836-971867	32	NZ_CP021216	Sinorhizobium meliloti RU11/001 plasmid pSmeRU11d, complete sequence	134536-134567	9	0.719
NZ_CP015574_2	2.13\|971836\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971836-971867	32	NZ_CP023469	Salmonella enterica subsp. enterica strain BAA-1586 plasmid pSalMiami, complete sequence	25439-25470	9	0.719
NZ_CP015574_2	2.16\|972019\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972019-972050	32	AP014193	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C71-MedDCM-OCT-S24-C63, * SEQUENCING IN PROGRESS *	27857-27888	9	0.719
NZ_CP015574_2	2.29\|972813\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972813-972844	32	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	78652-78683	9	0.719
NZ_CP015574_2	2.31\|972935\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972935-972966	32	NC_011887	Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence	59907-59938	9	0.719
NZ_CP015574_1	1.3\|953953\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953953-953984	32	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	382111-382142	10	0.688
NZ_CP015574_1	1.3\|953953\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953953-953984	32	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	346084-346115	10	0.688
NZ_CP015574_1	1.4\|954014\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954014-954045	32	AP019515	Halomonas sulfidaeris ATCC BAA-803 plasmid pBAA-803-A DNA, complete genome	40975-41006	10	0.688
NZ_CP015574_1	1.4\|954014\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954014-954045	32	NZ_CP011053	Halomonas sp. KO116 plasmid unnamed1, complete sequence	78205-78236	10	0.688
NZ_CP015574_1	1.10\|954380\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954380-954411	32	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	161882-161913	10	0.688
NZ_CP015574_2	2.10\|971653\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971653-971684	32	NZ_CP021977	Bacillus velezensis strain T20E-257 plasmid unnamed, complete sequence	2867-2898	10	0.688
NZ_CP015574_2	2.10\|971653\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971653-971684	32	NZ_CP014701	Bacillus amyloliquefaciens strain S499 plasmid, complete sequence	7328-7359	10	0.688
NZ_CP015574_2	2.10\|971653\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971653-971684	32	NZ_CP033053	Bacillus velezensis strain Bac57 plasmid unnamed, complete sequence	5212-5243	10	0.688
NZ_CP015574_2	2.10\|971653\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971653-971684	32	NC_013537	Bacillus subtilis strain ATCC 15841 plasmid pPL1, complete sequence	4160-4191	10	0.688
NZ_CP015574_2	2.10\|971653\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971653-971684	32	NZ_CP022557	Bacillus velezensis strain NJAU-Z9 plasmid unnamed1, complete sequence	7942-7973	10	0.688
NZ_CP015574_2	2.10\|971653\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971653-971684	32	NZ_CP022557	Bacillus velezensis strain NJAU-Z9 plasmid unnamed1, complete sequence	16564-16595	10	0.688
NZ_CP015574_2	2.10\|971653\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	971653-971684	32	NZ_CP022558	Bacillus velezensis strain NJAU-Z9 plasmid unnamed2, complete sequence	4560-4591	10	0.688
NZ_CP015574_2	2.17\|972080\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972080-972111	32	KU160664	Arthrobacter phage Salgado, complete genome	57125-57156	10	0.688
NZ_CP015574_2	2.17\|972080\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972080-972111	32	MF140418	Arthrobacter phage LiSara, complete genome	57455-57486	10	0.688
NZ_CP015574_2	2.17\|972080\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972080-972111	32	KU160654	Arthrobacter phage Laroye, complete genome	57323-57354	10	0.688
NZ_CP015574_2	2.29\|972813\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	972813-972844	32	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1099380-1099411	10	0.688
NZ_CP015574_1	1.3\|953953\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	953953-953984	32	NZ_CP029834	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence	394657-394688	11	0.656
NZ_CP015574_1	1.4\|954014\|32\|NZ_CP015574\|PILER-CR,CRISPRCasFinder,CRT	954014-954045	32	NZ_CP033971	Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed2, complete sequence	247599-247630	11	0.656
NZ_CP015574_2	2.33\|973057\|32\|NZ_CP015574\|CRISPRCasFinder,CRT	973057-973088	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	47822-47853	11	0.656

1. spacer 2.8|971531|32|NZ_CP015574|CRISPRCasFinder,CRT matches to KC911857 (Salmonella phage SPC32N, complete genome) position: , mismatch: 1, identity: 0.969

ggcgtaatacatcatcacgcacaatgaccatc	CRISPR spacer
ggcgcaatacatcatcacgcacaatgaccatc	Protospacer
****.***************************

2. spacer 2.8|971531|32|NZ_CP015574|CRISPRCasFinder,CRT matches to KC911856 (Salmonella phage SPC32H, complete genome) position: , mismatch: 1, identity: 0.969

ggcgtaatacatcatcacgcacaatgaccatc	CRISPR spacer
ggcgcaatacatcatcacgcacaatgaccatc	Protospacer
****.***************************

3. spacer 2.8|971531|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_016761 (Salmonella phage SPN1S, complete genome) position: , mismatch: 1, identity: 0.969

ggcgtaatacatcatcacgcacaatgaccatc	CRISPR spacer
ggcgcaatacatcatcacgcacaatgaccatc	Protospacer
****.***************************

4. spacer 2.8|971531|32|NZ_CP015574|CRISPRCasFinder,CRT matches to JQ691610 (Salmonella phage SPN9TCW, complete genome) position: , mismatch: 1, identity: 0.969

ggcgtaatacatcatcacgcacaatgaccatc	CRISPR spacer
ggcgcaatacatcatcacgcacaatgaccatc	Protospacer
****.***************************

5. spacer 2.8|971531|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_004775 (Enterobacteria phage epsilon15, complete genome) position: , mismatch: 1, identity: 0.969

ggcgtaatacatcatcacgcacaatgaccatc	CRISPR spacer
ggcgcaatacatcatcacgcacaatgaccatc	Protospacer
****.***************************

6. spacer 2.29|972813|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP025114 (Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

cgttcttccagcacatcctgcggctgcacgac	CRISPR spacer
tgttcttccagcacatccttcggctgcacgct	Protospacer
.****************** ********** .

7. spacer 2.29|972813|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP044544 (Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence) position: , mismatch: 4, identity: 0.875

cgttcttccagcacatcctgcggctgcacgac	CRISPR spacer
tgttcttccagcacatccttcggctgcacgct	Protospacer
.****************** ********** .

8. spacer 2.5|971348|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP039589 (Salmonella enterica subsp. enterica strain 10C0710427 plasmid p11-0230.1, complete sequence) position: , mismatch: 5, identity: 0.844

cggcgggaccccgcgattttctccctgacgaa	CRISPR spacer
agaggggcccccgcgattttctgcctgacgaa	Protospacer
 *. *** ************** *********

9. spacer 1.2|953892|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to MK448804 (Streptococcus phage Javan553, complete genome) position: , mismatch: 6, identity: 0.812

ggaacaaccattccctcaatgaacgggttatt--	CRISPR spacer
tgaacaaccagcccctcaatgaac--tttattac	Protospacer
 ********* .************   *****

10. spacer 1.2|953892|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to MK448815 (Streptococcus phage Javan585, complete genome) position: , mismatch: 6, identity: 0.812

ggaacaaccattccctcaatgaacgggttatt--	CRISPR spacer
tgaacaaccagcccctcaatgaac--tttattac	Protospacer
 ********* .************   *****

11. spacer 1.10|954380|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018865 (Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence) position: , mismatch: 6, identity: 0.812

taccgcgacaccgtcaacgacagcaaccactt	CRISPR spacer
aaccgcgtcaccggcaacgacagcaaccggct	Protospacer
 ****** ***** **************. .*

12. spacer 2.6|971409|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP018683 (Vibrio harveyi isolate QT520 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.812

-ccttgtgttgctctttgaattgctgcgccata	CRISPR spacer
ttgttgt-ctgctccttgacttgctgcgccata	Protospacer
 . **** .*****.**** *************

13. spacer 2.6|971409|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP018684 (Vibrio harveyi isolate QT520 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.812

-ccttgtgttgctctttgaattgctgcgccata	CRISPR spacer
ttgttgt-ctgctccttgatttgctgcgccata	Protospacer
 . **** .*****.**** *************

14. spacer 2.31|972935|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 6, identity: 0.812

ggcaactgggcgatcatctgggc-gctgtttat	CRISPR spacer
cgcaactgggcgatcaactgtgcggctgcttc-	Protospacer
 *************** *** ** ****.**

15. spacer 2.17|972080|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP034365 (Pantoea sp. CCBC3-3-1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaatgaactcaccgcctacaaagaccagttg	CRISPR spacer
agaaagaactcaccgcctataaagatgaactg	Protospacer
*.** **************.*****. *..**

16. spacer 2.19|972202|32|NZ_CP015574|CRISPRCasFinder,CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 7, identity: 0.781

tacgc-cccgaacgcggggctggctgctgacca	CRISPR spacer
-gcgcagccgtacgcagggctggctgctgagcg	Protospacer
 .***  *** ****.************** *.

17. spacer 2.21|972324|33|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 7, identity: 0.788

acgacgaatgcagcgcagactac-tggcgctgac	CRISPR spacer
acgacgaatgcagcacacactacttagttttga-	Protospacer
**************.** ***** *.*. .***

18. spacer 2.28|972752|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_019542 (Pectobacterium phage PP1, complete genome) position: , mismatch: 7, identity: 0.781

ttgtactgatcatcttccagcccggcaaacgc	CRISPR spacer
cggtaaccatcatcttccagcacggcaaaggc	Protospacer
. *** . ************* ******* **

19. spacer 2.28|972752|32|NZ_CP015574|CRISPRCasFinder,CRT matches to KY744566 (Pectobacterium phage POP72, complete genome) position: , mismatch: 7, identity: 0.781

ttgtactgatcatcttccagcccggcaaacgc	CRISPR spacer
cggtaaccatcatcttccagcacggcaaaggc	Protospacer
. *** . ************* ******* **

20. spacer 2.29|972813|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

cgttcttccagcacatcctgcggctgcacgac	CRISPR spacer
tgtcgcacccgcacatcctgccgctgcacgac	Protospacer
.**. . ** *********** **********

21. spacer 1.1|953831|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to MN694392 (Marine virus AFVG_250M8, complete genome) position: , mismatch: 8, identity: 0.75

ttttgtttaattctaaaacgggacaaatggaa	CRISPR spacer
atacaattaattctaaaacgggaaaaaaggga	Protospacer
 * .. ***************** *** **.*

22. spacer 1.1|953831|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NC_021722 (Lactobacillus paracasei strain LOCK919 plasmid pLOCK919, complete sequence) position: , mismatch: 8, identity: 0.75

ttttgtttaattctaaaacgggacaaatggaa	CRISPR spacer
tcgggtttaatcctaaaacgggaaaaaatgag	Protospacer
*.  *******.*********** ***  **.

23. spacer 1.1|953831|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035564 (Lactobacillus paracasei strain SRCM103299 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

ttttgtttaattctaaaacgggacaaatggaa	CRISPR spacer
tcgggtttaatcctaaaacgggaaaaaatgag	Protospacer
*.  *******.*********** ***  **.

24. spacer 1.1|953831|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029537 (Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttttgtttaattctaaaacgggacaaatggaa	CRISPR spacer
tcgggtttaatcctaaaacgggaaaaaatgag	Protospacer
*.  *******.*********** ***  **.

25. spacer 1.1|953831|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017263 (Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.22, complete sequence) position: , mismatch: 8, identity: 0.75

ttttgtttaattctaaaacgggacaaatggaa	CRISPR spacer
tcgggtttaatcctaaaacgggaaaaaatgag	Protospacer
*.  *******.*********** ***  **.

26. spacer 1.3|953953|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045385 (Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence) position: , mismatch: 8, identity: 0.75

--cggacaggcctgccagtcgggcaatatccgtc	CRISPR spacer
tctcggca--cctgcctgtcgggcaatttccgtg	Protospacer
  . *.**  ****** ********** *****

27. spacer 1.10|954380|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 8, identity: 0.75

taccgcgacaccgtcaacgacagcaaccactt	CRISPR spacer
cgccgcgacaccgtcaacgacatcatcctgcc	Protospacer
..******************** ** **  ..

28. spacer 1.10|954380|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

taccgcgacaccgtcaacgacagcaaccactt--	CRISPR spacer
gacagcgacaccgtcatcgacagca--cggtgaa	Protospacer
 ** ************ ********  *. *

29. spacer 1.14|954624|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025224 (Enterococcus sp. CR-Ec1 plasmid pCREc1, complete sequence) position: , mismatch: 8, identity: 0.75

tttttaaatccggacagaccctgtaacggatc	CRISPR spacer
tttttaaatccggaaagacactgtcaaaaaag	Protospacer
************** **** **** * ..*

30. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.75

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
ccagagcggcaaatggatttcgacgacctacg	Protospacer
*  ***.******* ***********   **

31. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
ccagagcggcaaatggatttcgacgacctacg	Protospacer
*  ***.******* ***********   **

32. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
ccagagcggcaaatggatttcgacgacctacg	Protospacer
*  ***.******* ***********   **

33. spacer 2.3|971226|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_010539 (Crocosphaera subtropica ATCC 51142 plasmid A, complete sequence) position: , mismatch: 8, identity: 0.75

cttggaaaagacaacaatatattggtaaatca	CRISPR spacer
acgagaaaagacaaaaatatattggttaaaga	Protospacer
 . .********** *********** **  *

34. spacer 2.5|971348|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_018146 (Zymomonas mobilis subsp. mobilis ATCC 29191 plasmid pZZ6.01, complete sequence) position: , mismatch: 8, identity: 0.75

cggcgggaccccgcgattttctccctgacgaa	CRISPR spacer
tcacaacaccccgcgattttctcgctgacaaa	Protospacer
. .*.. **************** *****.**

35. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

36. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

37. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

38. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

39. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

40. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

41. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

42. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

43. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

44. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

45. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

46. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

47. spacer 2.15|971958|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 8, identity: 0.75

---taactcacgtttgcgagcttccatctgtgccg	CRISPR spacer
gccggtctc---tttgagagcttccatctgcgccg	Protospacer
    . ***   **** *************.****

48. spacer 2.16|972019|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 8, identity: 0.75

ccgcgctgggccagccgcataacgctggaaat	CRISPR spacer
cggatcgcggccagccggatcacgctggaaaa	Protospacer
* *  *  ********* ** **********

49. spacer 2.19|972202|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP017079 (Novosphingobium resinovorum strain SA1 plasmid pSA4, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccccgaacgcggggctggctgctgacca	CRISPR spacer
cgcgccgcgatcgcggggctggctgctacgcg	Protospacer
..**** *** ****************.  *.

50. spacer 2.19|972202|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_AP017660 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_6) position: , mismatch: 8, identity: 0.75

tacgccccgaacgcggggctggctgctgacca	CRISPR spacer
cgcgccgcgatcgcggggctggctgctacgcg	Protospacer
..**** *** ****************.  *.

51. spacer 2.19|972202|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013073 (Sphingobium indicum B90A plasmid pSRL3, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccccgaacgcggggctggctgctgacca	CRISPR spacer
cgcgccgcgatcgcggggctggctgctacgcg	Protospacer
..**** *** ****************.  *.

52. spacer 2.19|972202|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP012703 (Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccccgaacgcggggctggctgctgacca	CRISPR spacer
cgcgccgcgatcgcggggctggctgctacgcg	Protospacer
..**** *** ****************.  *.

53. spacer 2.19|972202|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP005090 (Sphingobium sp. TKS plasmid pTK6, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccccgaacgcggggctggctgctgacca	CRISPR spacer
cgcgccgcgatcgcggggctggctgctacgcg	Protospacer
..**** *** ****************.  *.

54. spacer 2.19|972202|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_020544 (Sphingomonas sp. MM-1 plasmid pISP3, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccccgaacgcggggctggctgctgacca	CRISPR spacer
cgcgccgcgatcgcggggctggctgctacgcg	Protospacer
..**** *** ****************.  *.

55. spacer 2.19|972202|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP013266 (Sphingobium baderi strain DE-13 plasmid pDE2, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccccgaacgcggggctggctgctgacca	CRISPR spacer
cttgtcaccaacgccgggctggcggctgacca	Protospacer
. .*.* * ***** ******** ********

56. spacer 2.26|972630|32|NZ_CP015574|CRISPRCasFinder,CRT matches to CP000663 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence) position: , mismatch: 8, identity: 0.75

cgaaaaaacgggcgctgcgggtcattttcgaa	CRISPR spacer
gcaagaaacgggcgctacgggtcatgcgcgga	Protospacer
  **.***********.******** . **.*

57. spacer 2.28|972752|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 8, identity: 0.75

ttgtactgatcatcttccagcccggcaaacgc	CRISPR spacer
gtcaccgcatcatcgtccagcccggcaagcgc	Protospacer
 *   *  ****** *************.***

58. spacer 2.29|972813|32|NZ_CP015574|CRISPRCasFinder,CRT matches to MN693845 (Marine virus AFVG_250M833, complete genome) position: , mismatch: 8, identity: 0.75

cgttcttccagcacatcctgcggctgcacgac	CRISPR spacer
agcacttcctgcacatcctgcggctggacctg	Protospacer
 *. ***** **************** **

59. spacer 2.29|972813|32|NZ_CP015574|CRISPRCasFinder,CRT matches to CP053333 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgttcttccagcacatcctgcggctgcacgac	CRISPR spacer
ttttcttccagcacatcctgtagctgaatacc	Protospacer
. ******************..**** *.. *

60. spacer 1.1|953831|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to JX181825 (Salmonella phage STML-198, complete genome) position: , mismatch: 9, identity: 0.719

ttttgtttaattctaaaacgggacaaatggaa	CRISPR spacer
atagagttaattctaaaaccggaaaaatgaat	Protospacer
 *  . ************* *** *****.*

61. spacer 1.3|953953|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 9, identity: 0.719

cggacaggcctgccagtcgggcaatatccgtc	CRISPR spacer
cgaacaggcctggcagtcgggcaaggcgctgg	Protospacer
**.********* *********** .. *

62. spacer 1.6|954136|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaccacaatcagggaactgatccagcgtgg	CRISPR spacer
gggaccaccatcaaggaactgatccatgaaga	Protospacer
  ****** ****.************  . *.

63. spacer 1.6|954136|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaccacaatcagggaactgatccagcgtgg	CRISPR spacer
gggaccaccatcaaggaactgatccatgaaga	Protospacer
  ****** ****.************  . *.

64. spacer 1.6|954136|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022727 (Erwinia persicina strain B64 plasmid pEP2, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaccacaatcagggaactgatccagcgtgg	CRISPR spacer
agcagcacaatcagggcactgaaccagcgacc	Protospacer
   * *********** ***** ******

65. spacer 1.10|954380|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to AP018399 (Xanthomonas phage XacN1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

taccgcgacaccgtcaacgacagcaaccactt	CRISPR spacer
acttgcgacaccgacaccgacagcaacccgta	Protospacer
  ..********* ** ***********  *

66. spacer 1.10|954380|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NC_030917 (Gordonia phage OneUp, complete genome) position: , mismatch: 9, identity: 0.719

taccgcgacaccgtcaacgacagcaaccactt	CRISPR spacer
gtgagctacaccgtcaacgacatcaacgagta	Protospacer
    ** *************** **** * *

67. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

68. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

69. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

70. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

71. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

72. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

73. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

74. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

75. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

76. spacer 1.16|954746|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

77. spacer 2.6|971409|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP018682 (Vibrio harveyi isolate QT520 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ccttgtgttgctctttgaattgctgcgccata	CRISPR spacer
ttgttgcctgctccttgacttgctgcgccata	Protospacer
.. *   .*****.**** *************

78. spacer 2.6|971409|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP021170 (Paenibacillus bovis strain BD3526 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccttgtgttgctctttgaattgctgcgccata	CRISPR spacer
ctttgttttgctctttgacttgctgtaggtca	Protospacer
*.**** *********** ******..   .*

79. spacer 2.13|971836|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_010865 (Sinorhizobium meliloti plasmid pSmeSM11b, complete sequence) position: , mismatch: 9, identity: 0.719

taggcttctttcagcctggcggctcgtttacc	CRISPR spacer
agcgcatctttcagcctgacggctcggtgcgc	Protospacer
 . ** ************.******* *   *

80. spacer 2.13|971836|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP021216 (Sinorhizobium meliloti RU11/001 plasmid pSmeRU11d, complete sequence) position: , mismatch: 9, identity: 0.719

taggcttctttcagcctggcggctcgtttacc	CRISPR spacer
agcgcatctttcagcctgacggctcggtgcgc	Protospacer
 . ** ************.******* *   *

81. spacer 2.13|971836|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP023469 (Salmonella enterica subsp. enterica strain BAA-1586 plasmid pSalMiami, complete sequence) position: , mismatch: 9, identity: 0.719

taggcttctttcagcctggcggctcgtttacc	CRISPR spacer
cagcacgagttcagcgtggcggctggtttacc	Protospacer
.**  .   ****** ******** *******

82. spacer 2.16|972019|32|NZ_CP015574|CRISPRCasFinder,CRT matches to AP014193 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C71-MedDCM-OCT-S24-C63, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccgcgctgggccagccgcataacgctggaaat	CRISPR spacer
tgttgctgggccagccgcagaacactgacgat	Protospacer
.  .*************** ***.***. .**

83. spacer 2.29|972813|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgttcttccagcacatcctgcggctgcacgac	CRISPR spacer
ggcgcggccagcccatcctgcggctgcgcggg	Protospacer
 *. *  ***** **************.**.

84. spacer 2.31|972935|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_011887 (Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence) position: , mismatch: 9, identity: 0.719

ggcaactgggcgatcatctgggcgctgtttat	CRISPR spacer
atcgcctgggcgatcatctggccgatgtcctt	Protospacer
. *. **************** ** ***.. *

85. spacer 1.3|953953|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.688

cggacaggcctgccagtcgggcaatatccgtc	CRISPR spacer
atcctgggcctgcccgtcgagcaatatccgaa	Protospacer
    ..******** ****.**********

86. spacer 1.3|953953|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 10, identity: 0.688

cggacaggcctgccagtcgggcaatatccgtc	CRISPR spacer
atcctgggcctgcccgtcgagcaatatccgaa	Protospacer
    ..******** ****.**********

87. spacer 1.4|954014|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to AP019515 (Halomonas sulfidaeris ATCC BAA-803 plasmid pBAA-803-A DNA, complete genome) position: , mismatch: 10, identity: 0.688

ttgacggcctggcagcgcgtgacgttattagc	CRISPR spacer
ctccgtccctggcagtgcgtgacgctattacg	Protospacer
.*     ********.********.*****

88. spacer 1.4|954014|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011053 (Halomonas sp. KO116 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgacggcctggcagcgcgtgacgttattagc	CRISPR spacer
ctccgtccctggcagtgcgtgacgctattacg	Protospacer
.*     ********.********.*****

89. spacer 1.10|954380|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 10, identity: 0.688

taccgcgacaccgtcaacgacagcaaccactt	CRISPR spacer
agccgcgccaccggcaacgacagcacgaagac	Protospacer
 .***** ***** ***********   *  .

90. spacer 2.10|971653|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP021977 (Bacillus velezensis strain T20E-257 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tttcgtcggagctggtggacgtactggaacag	CRISPR spacer
cgctaagagagcgggtggccgtactggaacag	Protospacer
. ...  .**** ***** *************

91. spacer 2.10|971653|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP014701 (Bacillus amyloliquefaciens strain S499 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

tttcgtcggagctggtggacgtactggaacag	CRISPR spacer
cgctaagagagcgggtggccgtactggaacag	Protospacer
. ...  .**** ***** *************

92. spacer 2.10|971653|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP033053 (Bacillus velezensis strain Bac57 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tttcgtcggagctggtggacgtactggaacag	CRISPR spacer
cgctaaaagagcgggtggccgtactggaacag	Protospacer
. ...  .**** ***** *************

93. spacer 2.10|971653|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NC_013537 (Bacillus subtilis strain ATCC 15841 plasmid pPL1, complete sequence) position: , mismatch: 10, identity: 0.688

tttcgtcggagctggtggacgtactggaacag	CRISPR spacer
cgctaagagagcgggtggccgtactggaacag	Protospacer
. ...  .**** ***** *************

94. spacer 2.10|971653|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022557 (Bacillus velezensis strain NJAU-Z9 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tttcgtcggagctggtggacgtactggaacag	CRISPR spacer
cgctaagagagcgggtggccgtactggaacag	Protospacer
. ...  .**** ***** *************

95. spacer 2.10|971653|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022557 (Bacillus velezensis strain NJAU-Z9 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tttcgtcggagctggtggacgtactggaacag	CRISPR spacer
cgctaagagagcgggtggccgtactggaacag	Protospacer
. ...  .**** ***** *************

96. spacer 2.10|971653|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP022558 (Bacillus velezensis strain NJAU-Z9 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tttcgtcggagctggtggacgtactggaacag	CRISPR spacer
cgctaagagagcgggtggccgtactggaacag	Protospacer
. ...  .**** ***** *************

97. spacer 2.17|972080|32|NZ_CP015574|CRISPRCasFinder,CRT matches to KU160664 (Arthrobacter phage Salgado, complete genome) position: , mismatch: 10, identity: 0.688

aaaatgaactcaccgcctacaaagaccagttg	CRISPR spacer
tgaatgaaatcaccgcctacaaggagccccgc	Protospacer
 .****** *************.** *  .

98. spacer 2.17|972080|32|NZ_CP015574|CRISPRCasFinder,CRT matches to MF140418 (Arthrobacter phage LiSara, complete genome) position: , mismatch: 10, identity: 0.688

aaaatgaactcaccgcctacaaagaccagttg	CRISPR spacer
tgaatgaaatcaccgcctacaaggagccccgc	Protospacer
 .****** *************.** *  .

99. spacer 2.17|972080|32|NZ_CP015574|CRISPRCasFinder,CRT matches to KU160654 (Arthrobacter phage Laroye, complete genome) position: , mismatch: 10, identity: 0.688

aaaatgaactcaccgcctacaaagaccagttg	CRISPR spacer
tgaatgaaatcaccgcctacaaggagccccgc	Protospacer
 .****** *************.** *  .

100. spacer 2.29|972813|32|NZ_CP015574|CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgttcttccagcacatcctgcggctgcacgac	CRISPR spacer
gccagttccaccacatcctgcggccgcaagtt	Protospacer
  .  ***** *************.*** * .

101. spacer 1.3|953953|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 11, identity: 0.656

cggacaggcctgccagtcgggcaatatccgtc	CRISPR spacer
atcctgcgcctgcccgtcgagcaatatccgaa	Protospacer
    .. ******* ****.**********

102. spacer 1.4|954014|32|NZ_CP015574|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033971 (Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

ttgacggcctggcagcgcgtgacgttattagc	CRISPR spacer
gctgcggcctcgcagcgcgtgacgataggcct	Protospacer
 . .****** ************* **    .

103. spacer 2.33|973057|32|NZ_CP015574|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

aggggcgttccgcagtcggcaagggctgaaaa	CRISPR spacer
tcgggcatcccgcagtcggcaagggtgcggcg	Protospacer
  ****.*.****************.  .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1075730 : 1109987

Escherichia_phage(27.27%)

integrase,transposase,tRNA

attL 1073945:1073959|attR 1108197:1108211

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1073945:1073959	attL	NA	NA	NA	NA
WP_000047228.1\|1075730_1078361_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.5e-79	38.3
WP_000906486.1\|1078595_1078781_+	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	4.9e-12	66.7
WP_000271296.1\|1080033_1080600_+	fructose-1-phosphate/6-phosphogluconate phosphatase	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	7.2e-14	27.6
WP_001279499.1\|1080596_1081022_+	DedA family protein	NA	NA	NA	NA
WP_000611821.1\|1081098_1082655_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_001130194.1\|1082804_1083320_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_000645134.1\|1083665_1085036_+	glycoporin	NA	NA	NA	NA
WP_001067855.1\|1086497_1087202_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000240536.1\|1087957_1088809_+	replication protein	NA	NA	NA	NA
WP_001043265.1\|1089115_1089931_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_024261901.1\|1089991_1090795_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000480968.1\|1090794_1091631_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001067855.1\|1091691_1092396_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|1092546_1093362_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|1093551_1094256_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000935452.1\|1094302_1095607_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_000204520.1\|1095645_1096353_-	EAL domain-containing protein	NA	NA	NA	NA
WP_000993386.1\|1096349_1096586_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277456.1\|1096582_1096945_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_032193845.1\|1096962_1098657_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.1e-38	27.3
WP_001340589.1\|1098708_1099131_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732292.1\|1099166_1099442_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294663.1\|1099455_1099806_-	mercuric transport protein MerT	NA	NA	NA	NA
WP_000429836.1\|1099877_1100312_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_000844627.1\|1101098_1101341_+\|transposase	transposase	NA	NA	NA	NA
WP_000470728.1\|1101372_1102050_-	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA
WP_000804064.1\|1102128_1103328_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
WP_000058717.1\|1103359_1104244_-	EamA family transporter	NA	NA	NA	NA
WP_001351729.1\|1104381_1104774_-	cysteine hydrolase	NA	NA	NA	NA
WP_031613424.1\|1106638_1106989_+	hypothetical protein	NA	NA	NA	NA
WP_001393253.1\|1107214_1107547_+	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_000239590.1\|1107593_1108469_-	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
1108197:1108211	attR	NA	NA	NA	NA
WP_000608644.1\|1108724_1109987_-\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0

DBSCAN-SWA_2

1405563 : 1414497

Enterobacteria_phage(83.33%)

integrase

attL 1410332:1410347|attR 1417112:1417127

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021000674.1\|1405563_1407897_-	hypothetical protein	Q7M2A8	Enterobacteria_phage	0.0e+00	84.5
WP_000743150.1\|1407911_1408232_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_001604623.1\|1408228_1408456_-	hypothetical protein	NA	NA	NA	NA
WP_023196289.1\|1408452_1409004_-	ash family protein	Q7M2A7	Enterobacteria_phage	8.6e-36	71.3
WP_021000671.1\|1409804_1410542_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	4.4e-80	64.4
1410332:1410347	attL	NA	NA	NA	NA
WP_000984211.1\|1410538_1410784_+	transcriptional regulator	Q7M294	Enterobacteria_phage	6.3e-31	76.5
WP_023196288.1\|1410800_1411367_+	hypothetical protein	Q7M2A1	Enterobacteria_phage	4.5e-56	62.7
WP_023196287.1\|1411774_1412668_+	DUF4747 family protein	NA	NA	NA	NA
WP_021000667.1\|1412835_1413273_+	hypothetical protein	NA	NA	NA	NA
WP_023196286.1\|1413303_1414497_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	8.2e-108	50.4
1417112:1417127	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1934190 : 1943361

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1934190_1935138_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
WP_000824854.1\|1935121_1935853_+	ABC transporter permease	NA	NA	NA	NA
WP_001216964.1\|1935833_1935941_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1936000_1936732_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|1936954_1938640_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|1938636_1939356_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_086048299.1\|1939402_1939870_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.7e-72	89.0
WP_001265356.1\|1939926_1940457_-	YehR family lipoprotein	NA	NA	NA	NA
WP_086048300.1\|1940628_1941087_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.8e-53	73.2
WP_000195334.1\|1941327_1943361_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

2104465 : 2115049

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001219015.1\|2104465_2104939_-	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
WP_021000459.1\|2105585_2105876_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	3.0e-08	49.1
WP_000598920.1\|2106247_2107045_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_001537372.1\|2107525_2107687_+	hypothetical protein	NA	NA	NA	NA
WP_000394197.1\|2107813_2108233_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000457663.1\|2108235_2109504_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.3e-227	91.9
WP_000208509.1\|2109958_2110171_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_079833561.1\|2110181_2110370_+	cold-shock protein	NA	NA	NA	NA
WP_001080668.1\|2110630_2111809_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	6.6e-110	57.2
WP_000107435.1\|2112458_2112770_+	hypothetical protein	NA	NA	NA	NA
WP_000377039.1\|2112849_2113545_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	28.2
WP_001157307.1\|2113618_2115049_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_5

3020494 : 3106821

Salmonella_phage(35.29%)

holin,transposase,integrase,head,capsid,lysis,tail,protease,tRNA,terminase,portal

attL 3044587:3044606|attR 3117973:3117992

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023196027.1\|3020494_3021175_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	1.5e-74	66.8
WP_000374046.1\|3021794_3022454_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
WP_000904446.1\|3022540_3022870_+	sulfurtransferase TusE	NA	NA	NA	NA
WP_000072884.1\|3022866_3023148_-	acylphosphatase	NA	NA	NA	NA
WP_000548080.1\|3023196_3023976_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_000859416.1\|3024001_3024550_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_000140480.1\|3024764_3025976_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000561983.1\|3026033_3026351_+	heat shock protein HspQ	NA	NA	NA	NA
WP_000975203.1\|3026395_3026812_-	CoA-binding protein	NA	NA	NA	NA
WP_000847719.1\|3026982_3027645_+	DUF2057 family protein	NA	NA	NA	NA
WP_000424187.1\|3027739_3028198_+	methylglyoxal synthase	NA	NA	NA	NA
WP_000420519.1\|3028233_3030288_-	DNA helicase IV	A7KV33	Bacillus_phage	8.5e-20	27.6
WP_001261222.1\|3030411_3030858_+	YccF domain-containing protein	NA	NA	NA	NA
WP_000950861.1\|3030876_3033030_+	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001202375.1\|3033016_3033622_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_000288732.1\|3033838_3034348_+	cell division inhibitor SulA	NA	NA	NA	NA
WP_001670727.1\|3034704_3035757_+	porin OmpA	NA	NA	NA	NA
WP_000877172.1\|3035828_3036281_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_000156457.1\|3036466_3038227_+\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000227928.1\|3038295_3038814_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_001537784.1\|3038913_3039081_-	ribosome modulation factor	NA	NA	NA	NA
WP_000759136.1\|3039336_3039900_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_000433416.1\|3039896_3041537_-	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_000333152.1\|3041541_3042795_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_000053051.1\|3042809_3044717_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	5.4e-53	29.8
3044587:3044606	attL	NA	NA	NA	NA
WP_001086482.1\|3044729_3046838_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_000224077.1\|3046936_3048046_+	MOSC domain-containing protein	NA	NA	NA	NA
WP_001220671.1\|3048042_3048585_-	cell division protein ZapC	NA	NA	NA	NA
WP_000291723.1\|3048750_3049761_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_000193779.1\|3049968_3052581_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	3.7e-20	22.8
WP_024133401.1\|3053088_3053514_+	hypothetical protein	NA	NA	NA	NA
WP_000343758.1\|3053510_3054731_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_000388788.1\|3054950_3055169_-	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	1.7e-24	89.7
WP_000161705.1\|3055381_3056104_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA
WP_000143158.1\|3056300_3056882_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.8e-92	87.4
WP_031618324.1\|3056871_3057192_-	hypothetical protein	A0A0M4QWS3	Salmonella_phage	4.9e-44	79.2
WP_001537328.1\|3057692_3060131_-\|tail	tail protein	A0A0K2FIZ6	Escherichia_phage	6.0e-89	63.0
WP_000178851.1\|3060184_3060427_-	hypothetical protein	NA	NA	NA	NA
WP_001537444.1\|3060465_3063828_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	80.4
WP_023196420.1\|3063890_3064538_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.2e-89	78.1
WP_000662740.1\|3064435_3065173_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.2e-128	84.6
WP_001152690.1\|3065179_3065878_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	9.3e-104	76.3
WP_000447369.1\|3065887_3066217_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
WP_000372071.1\|3066219_3069261_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	2.3e-292	64.6
WP_010989052.1\|3069232_3069571_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000479607.1\|3069567_3069963_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_000971954.1\|3070013_3070760_-\|tail	tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
WP_000033882.1\|3070767_3071169_-\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	1.4e-51	99.0
WP_000817263.1\|3071277_3072408_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	9.2e-218	100.0
WP_000677089.1\|3072456_3073035_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
WP_000083294.1\|3073062_3073446_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
WP_000201486.1\|3073456_3073816_-	DNA packaging protein	NA	NA	NA	NA
WP_000522566.1\|3073873_3074902_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
WP_000011260.1\|3074956_3075304_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
WP_001189496.1\|3075316_3076813_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	7.4e-98	52.9
WP_000831820.1\|3076802_3078383_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	1.2e-188	62.8
WP_000201415.1\|3078379_3078583_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
WP_000623092.1\|3078566_3080498_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.3e-259	65.9
WP_001102153.1\|3080469_3081015_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
WP_000669693.1\|3081300_3081702_+	hypothetical protein	NA	NA	NA	NA
WP_024133404.1\|3081937_3082387_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	1.9e-57	85.7
WP_001005894.1\|3082419_3083046_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	7.1e-95	80.7
WP_000781780.1\|3083048_3083396_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	9.8e-46	80.4
WP_000993184.1\|3083590_3084280_-	antitermination protein	I6PDF8	Cronobacter_phage	2.4e-59	51.9
WP_000801757.1\|3084276_3084417_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
WP_001096499.1\|3084413_3085025_-	hypothetical protein	A0A0M4RU10	Salmonella_phage	1.6e-91	99.0
WP_000929790.1\|3085233_3085836_-	DUF1367 family protein	S4TTI0	Salmonella_phage	7.5e-110	99.5
WP_014343878.1\|3085870_3086119_-	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
WP_001217669.1\|3086235_3086469_-	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
WP_000273939.1\|3086752_3087013_-	hypothetical protein	NA	NA	NA	NA
WP_001537422.1\|3087829_3088525_-	replication protein 14	G8C7U6	Escherichia_phage	5.3e-59	47.4
WP_000431315.1\|3088521_3089439_-	replication protein	A5VW95	Enterobacteria_phage	5.2e-54	81.3
WP_072208512.1\|3089631_3090006_-	hypothetical protein	S4TTD7	Salmonella_phage	1.2e-62	96.8
WP_000992433.1\|3089971_3090208_-	hypothetical protein	A0A0M4QX15	Salmonella_phage	1.5e-26	71.8
WP_001230958.1\|3090312_3090708_+	helix-turn-helix domain-containing protein	K7PM35	Enterobacteria_phage	2.7e-47	72.5
WP_000097141.1\|3090879_3091728_+	hypothetical protein	NA	NA	NA	NA
WP_000846936.1\|3091724_3092531_+	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_000373339.1\|3092570_3092777_-	hypothetical protein	K7P7I0	Enterobacteria_phage	2.1e-16	67.6
WP_022742800.1\|3093365_3093716_+	hypothetical protein	S4TSN6	Salmonella_phage	6.4e-61	98.3
WP_000014350.1\|3093842_3097043_+	DNA breaking-rejoining protein	S4TNL0	Salmonella_phage	0.0e+00	78.7
WP_077907589.1\|3097005_3098163_+	recombinase RecT	S4TTE8	Salmonella_phage	2.1e-217	99.7
WP_001237031.1\|3098205_3098445_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_000065276.1\|3098485_3098734_+	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001262307.1\|3098778_3100071_+\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	3.4e-253	100.0
WP_000191406.1\|3100265_3101468_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_020839440.1\|3101548_3102982_-	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_000544848.1\|3103227_3104442_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_000762343.1\|3104758_3105220_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000117870.1\|3105420_3106821_+\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
3117973:3117992	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3171021 : 3179902

Enterobacteria_phage(14.29%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086016038.1\|3171021_3172276_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	4.8e-18	34.5
WP_001537332.1\|3172589_3172967_+	hypothetical protein	A0A077KET4	Ralstonia_phage	5.3e-21	41.0
WP_001117984.1\|3173128_3173326_+	hypothetical protein	NA	NA	NA	NA
WP_000934064.1\|3173538_3175815_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000520787.1\|3175845_3176166_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.5e-13	45.7
WP_000447499.1\|3176489_3176711_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000125873.1\|3176840_3178787_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
WP_001201751.1\|3178783_3179902_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_7

4533181 : 4580874

Burkholderia_phage(36.36%)

tail,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001182223.1\|4533181_4534180_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039330.1\|4534267_4535578_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416272.1\|4535824_4536340_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4536439_4536649_-	CsbD family protein	NA	NA	NA	NA
WP_001575282.1\|4536670_4536784_-	hypothetical protein	NA	NA	NA	NA
WP_001128103.1\|4536780_4538106_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4538284_4538893_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002900.1\|4539001_4539370_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4539540_4541961_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455249.1\|4542059_4542932_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019219.1\|4542945_4543443_-	chorismate lyase	NA	NA	NA	NA
WP_000782497.1\|4543623_4544541_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973642.1\|4544704_4546063_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4546151_4547261_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000695415.1\|4547622_4548813_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382565.1\|4548944_4550489_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252085.1\|4550503_4551394_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982750.1\|4551559_4551970_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750804.1\|4552112_4554209_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_000977970.1\|4554208_4554946_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_122017358.1\|4554942_4555611_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4555644_4555887_-	outer membrane protein	NA	NA	NA	NA
WP_000790029.1\|4556330_4557980_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136400.1\|4558324_4559674_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4559804_4560152_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226442.1\|4560727_4561015_+	membrane protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
WP_001270434.1\|4561017_4561623_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	1.9e-60	59.9
WP_000777268.1\|4561635_4561950_+	hypothetical protein	Q6QIC4	Burkholderia_phage	4.9e-20	49.1
WP_000449436.1\|4562109_4562565_+	hypothetical protein	NA	NA	NA	NA
WP_000875314.1\|4562561_4562759_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000729850.1\|4562748_4564176_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.2e-193	70.9
WP_000907494.1\|4564175_4564700_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_001003639.1\|4564751_4565069_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001185654.1\|4565028_4565157_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001262486.1\|4565253_4567608_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	4.0e-66	30.9
WP_000271425.1\|4567607_4568561_+	chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_001269716.1\|4568560_4568770_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000818147.1\|4568757_4569801_+	phage late control D family protein	A4JWL3	Burkholderia_virus	1.9e-76	45.6
WP_000679393.1\|4569810_4570533_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_000593182.1\|4570860_4571223_+	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000703638.1\|4571219_4572149_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	9.7e-149	83.1
WP_001095012.1\|4572148_4573696_+	hypothetical protein	B9UDL6	Salmonella_phage	4.2e-48	30.1
WP_001093502.1\|4573859_4574219_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	8.0e-35	63.3
WP_023196029.1\|4574209_4575325_+	hypothetical protein	Q6QI99	Burkholderia_phage	4.5e-100	52.0
WP_000359500.1\|4575317_4575950_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
WP_000368194.1\|4575952_4577719_+\|tail	tail protein	A0A0M3ULF6	Salmonella_phage	5.5e-52	52.2
WP_000170635.1\|4577723_4578329_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_000084335.1\|4578325_4578769_+	hypothetical protein	NA	NA	NA	NA
WP_103111051.1\|4579137_4579572_+	serine acetyltransferase	NA	NA	NA	NA
WP_000587738.1\|4580145_4580874_+	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015574

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection