CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP020333	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM170, complete sequence	0 crisprs	WYL,csa3	0
NZ_CP020332	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM259, complete sequence	0 crisprs	csa3,WYL,cas3	1
NZ_CP020330	Martelella mediterranea DSM 17316 strain MACL11 chromosome, complete genome	0 crisprs	csa3,DEDDh,WYL,cas3	7
NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	0 crisprs	NA	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

182756 : 213725

Lactococcus_phage(16.67%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079921067.1\|182756_183971_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_026173652.1\|185043_185802_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	3.2e-41	39.2
WP_155122305.1\|186095_186467_+	hypothetical protein	NA	NA	NA	NA
WP_018065782.1\|186531_187992_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_018065780.1\|188953_189382_-	FixH family protein	NA	NA	NA	NA
WP_051085129.1\|189717_190830_-	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_009452631.1\|190826_191291_-	signal peptidase II	NA	NA	NA	NA
WP_018065777.1\|191316_192060_-	cytochrome C biogenesis protein CcdA	NA	NA	NA	NA
WP_009452629.1\|192059_192680_-	SCO family protein	NA	NA	NA	NA
WP_009452628.1\|192676_193180_-	copper chaperone PCu(A)C	NA	NA	NA	NA
WP_018065776.1\|193172_193790_-	cation transporter	NA	NA	NA	NA
WP_024706424.1\|193856_195989_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.5e-123	39.7
WP_169337200.1\|196210_196717_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_155122306.1\|197507_198859_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.7e-11	31.1
WP_155122307.1\|200038_201547_+	sulfatase	NA	NA	NA	NA
WP_079921060.1\|201652_201901_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	5.8e-08	40.7
WP_018065767.1\|202277_203390_-	ABC transporter permease	NA	NA	NA	NA
WP_018065766.1\|203393_206165_-	ribosome-associated ATPase/putative transporter RbbA	A0A2H4PQG7	Staphylococcus_phage	3.9e-20	29.2
WP_033410529.1\|206161_207247_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_018065763.1\|208031_208733_+\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_018065762.1\|208984_210340_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_026173641.1\|211091_211910_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_026173640.1\|212025_212859_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	1.3e-11	28.7
WP_018065758.1\|213023_213725_-\|transposase	IS6 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP020330

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

136235 : 142485

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_018063435.1\|136235_137009_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.4e-28	32.0
WP_018063434.1\|137035_137812_-	ABC transporter permease	NA	NA	NA	NA
WP_018063433.1\|137804_138602_-	ABC transporter permease	G3M9Y4	Bacillus_virus	1.0e-05	22.5
WP_018063432.1\|138984_140022_-	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	2.7e-38	30.6
WP_018063431.1\|140021_140966_-	acetaldehyde dehydrogenase (acetylating)	E5EQ71	Micromonas_sp._RCC1109_virus	1.7e-36	35.2
WP_018063430.1\|141002_141707_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-10	24.7
WP_018063429.1\|141699_142485_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.7e-08	21.3

DBSCAN-SWA_2

1203864 : 1263942

Acinetobacter_phage(20.0%)

holin,head,tail,capsid,portal,terminase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_018066121.1\|1203864_1204551_-\|tRNA	tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD	NA	NA	NA	NA
WP_026173697.1\|1204597_1205770_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_018066119.1\|1205869_1206895_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	1.8e-34	29.4
WP_155122029.1\|1206881_1207235_+	hypothetical protein	NA	NA	NA	NA
WP_018066118.1\|1207375_1208092_+	DUF1045 domain-containing protein	NA	NA	NA	NA
WP_018066117.1\|1208221_1209013_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_018066116.1\|1209134_1210070_+	allantoinase PuuE	NA	NA	NA	NA
WP_018066115.1\|1210066_1210561_+	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	NA	NA	NA	NA
WP_018066114.1\|1210564_1211596_+	allantoicase	NA	NA	NA	NA
WP_018066113.1\|1211592_1212090_+	ureidoglycolate lyase	NA	NA	NA	NA
WP_018066112.1\|1212086_1212443_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_018066111.1\|1212442_1213183_+	metallophosphoesterase family protein	NA	NA	NA	NA
WP_026173696.1\|1213426_1214575_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_018066109.1\|1214639_1215938_-	guanine deaminase	NA	NA	NA	NA
WP_018066108.1\|1215934_1217173_-	urate hydroxylase PuuD	NA	NA	NA	NA
WP_018066107.1\|1217270_1218110_-	xanthine dehydrogenase accessory protein XdhC	A0A0P0IKN7	Acinetobacter_phage	1.6e-25	34.3
WP_018066106.1\|1218113_1220459_-	xanthine dehydrogenase molybdopterin binding subunit	A0A0P0I429	Acinetobacter_phage	1.4e-207	50.9
WP_018066105.1\|1220462_1221926_-	xanthine dehydrogenase small subunit	A0A0P0IVM8	Acinetobacter_phage	2.9e-107	46.1
WP_018066104.1\|1221956_1222733_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_018066103.1\|1222985_1224032_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_018066102.1\|1224045_1224807_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_018066101.1\|1224922_1226197_+	peptide antibiotic transporter SbmA	NA	NA	NA	NA
WP_026173695.1\|1226332_1226920_+	NnrU family protein	NA	NA	NA	NA
WP_018066099.1\|1227012_1227699_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_018066098.1\|1227767_1229195_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_018066097.1\|1229210_1229813_-	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_018066096.1\|1229915_1230623_-	hypothetical protein	NA	NA	NA	NA
WP_018066095.1\|1230828_1231302_+	hypothetical protein	NA	NA	NA	NA
WP_018066094.1\|1231295_1232642_+	GAF domain-containing protein	NA	NA	NA	NA
WP_051085140.1\|1232667_1233759_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_018066092.1\|1233946_1235590_+	alpha-glucosidase	NA	NA	NA	NA
WP_026173694.1\|1235652_1236309_-	aquaporin	NA	NA	NA	NA
WP_018066090.1\|1236453_1237326_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_018066089.1\|1237577_1238906_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_155122030.1\|1239083_1239545_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_018066087.1\|1239640_1240135_-	HugZ family protein	NA	NA	NA	NA
WP_018066086.1\|1240131_1241196_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.3e-19	31.6
WP_026173693.1\|1241372_1241954_+	thymidine kinase	A0A1D3RL22	Cronobacter_phage	3.6e-53	54.5
WP_079920703.1\|1241983_1242835_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_018066083.1\|1243123_1245448_-	NADP-dependent malic enzyme	NA	NA	NA	NA
WP_155122196.1\|1245701_1246076_+	DoxX family membrane protein	NA	NA	NA	NA
WP_026173692.1\|1246208_1247504_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_018066080.1\|1247555_1248839_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_018066079.1\|1248949_1249660_-	RlmE family RNA methyltransferase	A0A140HEP8	Marsac_virus	2.7e-05	22.9
WP_018066078.1\|1249660_1251175_-	Ppx/GppA family phosphatase	NA	NA	NA	NA
WP_018066076.1\|1252770_1253127_-	hypothetical protein	NA	NA	NA	NA
WP_155122031.1\|1253131_1255159_-	hypothetical protein	A0A291AUM6	Sinorhizobium_phage	1.6e-10	23.3
WP_026173691.1\|1255158_1256778_-\|terminase	terminase large subunit	D0R0D0	Streptococcus_phage	1.7e-84	35.1
WP_018066073.1\|1256749_1257163_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_018066072.1\|1257159_1257489_-\|head	phage head closure protein	NA	NA	NA	NA
WP_018066071.1\|1257485_1257896_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_018066070.1\|1257895_1258312_-	HK97 gp10 family phage protein	B4UTQ0	Rhizobium_phage	1.3e-12	38.3
WP_018066069.1\|1258313_1258619_-\|head,tail	phage gp6-like head-tail connector protein	A0A0F7L420	uncultured_marine_virus	9.6e-05	42.0
WP_018066068.1\|1258615_1259128_-	hypothetical protein	NA	NA	NA	NA
WP_018066067.1\|1259130_1259622_-	hypothetical protein	NA	NA	NA	NA
WP_026173700.1\|1259618_1259981_-	HNH endonuclease	A0A218MNA6	uncultured_virus	2.9e-16	39.8
WP_018066065.1\|1259983_1260247_-	hypothetical protein	NA	NA	NA	NA
WP_018066064.1\|1260248_1260635_-	hypothetical protein	NA	NA	NA	NA
WP_018066063.1\|1260695_1261850_-\|capsid	phage major capsid protein	Q3HQT0	Burkholderia_phage	3.7e-41	33.1
WP_018066062.1\|1261857_1262358_-\|head,protease	HK97 family phage prohead protease	A0A0R6PIR7	Moraxella_phage	1.3e-22	40.0
WP_026173689.1\|1262360_1262750_-	hypothetical protein	NA	NA	NA	NA
WP_018066060.1\|1262736_1263942_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	5.8e-45	33.6

DBSCAN-SWA_3

1450198 : 1460588

uncultured_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155122068.1\|1450198_1451300_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_018066308.1\|1452139_1452304_+\|transposase	transposase	NA	NA	NA	NA
WP_155122038.1\|1452674_1454204_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	3.3e-53	34.3
WP_018064946.1\|1454343_1455228_+	sulfotransferase family protein	NA	NA	NA	NA
WP_018064947.1\|1455382_1455586_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_079920716.1\|1455646_1456021_-\|transposase	transposase	NA	NA	NA	NA
WP_026173501.1\|1457916_1458639_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.2e-56	47.9
WP_155122039.1\|1460135_1460588_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

2785230 : 2812352

Ochrobactrum_phage(30.43%)

transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_018066406.1\|2785230_2786160_-	hypothetical protein	G8GWF3	Rhodobacter_phage	7.3e-104	60.5
WP_155122221.1\|2786302_2786734_-	hypothetical protein	NA	NA	NA	NA
WP_018066408.1\|2786724_2787150_-	DUF1320 domain-containing protein	G8GWF0	Rhodobacter_phage	1.7e-36	57.9
WP_018066409.1\|2787152_2787647_-	hypothetical protein	NA	NA	NA	NA
WP_018066410.1\|2787712_2788645_-\|capsid	phage capsid protein	B5TA95	Burkholderia_phage	2.7e-66	43.3
WP_018066411.1\|2788671_2789052_-	DUF2190 family protein	NA	NA	NA	NA
WP_018066412.1\|2789062_2790169_-	peptidase	Q6QIB7	Burkholderia_phage	6.5e-59	38.1
WP_018066413.1\|2790405_2790909_-	phage virion morphogenesis protein	A0A1B0T6K4	Pelagibaca_phage	2.5e-10	32.3
WP_018066414.1\|2791121_2792363_-	hypothetical protein	J9STS2	Pseudomonas_phage	1.2e-69	39.2
WP_018066415.1\|2792355_2793831_-	DUF935 family protein	R9U4B4	Rhizobium_phage	1.0e-67	39.3
WP_018066416.1\|2793832_2795452_-	hypothetical protein	M4SRU6	Rhodobacter_phage	4.3e-144	54.1
WP_018066417.1\|2795448_2796033_-	DUF3486 family protein	A0A219VH75	Ochrobactrum_phage	1.6e-48	51.0
WP_018066418.1\|2796036_2796336_-	hypothetical protein	M4SPS4	Rhodobacter_phage	2.5e-13	43.2
WP_018066419.1\|2796337_2796667_-	DUF2730 family protein	A0A219VHD8	Ochrobactrum_phage	3.9e-12	35.9
WP_018066420.1\|2796663_2796882_-	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA
WP_155122112.1\|2796871_2797189_-	hypothetical protein	NA	NA	NA	NA
WP_155122113.1\|2797121_2797457_-	hypothetical protein	NA	NA	NA	NA
WP_026173756.1\|2797495_2797741_-	hypothetical protein	NA	NA	NA	NA
WP_018066424.1\|2797752_2798454_-	N-acetylmuramoyl-L-alanine amidase	A0A076YNV9	Mesorhizobium_phage	1.4e-27	44.6
WP_018066425.1\|2798540_2798900_-	hypothetical protein	NA	NA	NA	NA
WP_018066426.1\|2798892_2799165_-	hypothetical protein	A0A219VHD0	Ochrobactrum_phage	4.1e-07	43.8
WP_018066427.1\|2799161_2799785_-	regulatory protein GemA	M4STB3	Rhodobacter_phage	5.5e-39	45.1
WP_018066428.1\|2799904_2800213_+	hypothetical protein	NA	NA	NA	NA
WP_155122222.1\|2800221_2800839_-	DUF3164 family protein	A0A1B0T6L8	Pelagibaca_phage	1.2e-70	61.2
WP_018066430.1\|2800988_2801228_-	hypothetical protein	NA	NA	NA	NA
WP_018066431.1\|2801224_2801527_-	hypothetical protein	NA	NA	NA	NA
WP_018066432.1\|2801526_2802555_-	AAA family ATPase	A0A219VHC7	Ochrobactrum_phage	2.3e-103	57.0
WP_018066433.1\|2802649_2804608_-\|transposase	Mu transposase C-terminal domain-containing protein	A0A219VHD4	Ochrobactrum_phage	3.6e-169	62.9
WP_018066434.1\|2804604_2805063_-	hypothetical protein	A0A219VHC5	Ochrobactrum_phage	5.6e-49	66.2
WP_018066435.1\|2805059_2805869_-	ParB/RepB/Spo0J family partition protein	A0A219VHB6	Ochrobactrum_phage	7.3e-68	56.6
WP_155122114.1\|2805989_2806259_+	hypothetical protein	NA	NA	NA	NA
WP_155122115.1\|2806205_2806409_-	hypothetical protein	NA	NA	NA	NA
WP_018066437.1\|2806405_2806759_-	hypothetical protein	NA	NA	NA	NA
WP_018066439.1\|2806970_2807258_-	helix-turn-helix domain-containing protein	R9U1A5	Rhizobium_phage	2.8e-06	43.5
WP_026173759.1\|2807401_2808085_+	helix-turn-helix domain-containing protein	G8GWB1	Rhodobacter_phage	7.3e-53	46.9
WP_085986578.1\|2808337_2809396_+	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	3.9e-61	41.4
WP_033410784.1\|2809388_2812352_+	ATP-binding protein	A0A1B5FPD5	Escherichia_phage	1.9e-28	23.3

DBSCAN-SWA_5

2858522 : 2927546

uncultured_Mediterranean_phage(25.0%)

bacteriocin,protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079920699.1\|2858522_2859458_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	4.4e-40	40.9
WP_018062976.1\|2859787_2860414_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_033409384.1\|2860404_2861391_-	DUF2232 domain-containing protein	NA	NA	NA	NA
WP_018062978.1\|2861579_2861828_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_018062979.1\|2861857_2862295_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_018062980.1\|2862720_2863965_-	hypothetical protein	NA	NA	NA	NA
WP_018062981.1\|2864474_2865230_-	siderophore-interacting protein	NA	NA	NA	NA
WP_018062982.1\|2865280_2866201_-	calcium/sodium antiporter	NA	NA	NA	NA
WP_026173168.1\|2866516_2867563_-	aldo/keto reductase	NA	NA	NA	NA
WP_018062984.1\|2867788_2868733_+	ACP S-malonyltransferase	NA	NA	NA	NA
WP_018062985.1\|2868782_2869520_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
WP_018062986.1\|2869797_2870034_+	acyl carrier protein	E3SSM9	Prochlorococcus_phage	2.9e-09	56.5
WP_018062987.1\|2870270_2871533_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_051085063.1\|2871757_2872909_+	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_026173169.1\|2872993_2873881_+	YicC family protein	NA	NA	NA	NA
WP_018062990.1\|2873883_2874522_+	guanylate kinase	A0A223FN12	Murmansk_poxvirus	3.7e-14	30.3
WP_018062991.1\|2874569_2875970_-	sulfatase	NA	NA	NA	NA
WP_018062992.1\|2875948_2876917_-	carbohydrate kinase family protein	NA	NA	NA	NA
WP_018062993.1\|2876926_2877928_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.3e-15	31.0
WP_018062994.1\|2877932_2878766_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_018062995.1\|2878762_2879707_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_018062996.1\|2879773_2881042_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_018062997.1\|2881224_2882778_-	hypothetical protein	NA	NA	NA	NA
WP_018062998.1\|2882774_2884040_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_018062999.1\|2884118_2885210_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_018063000.1\|2885804_2889272_+	DNA polymerase III subunit alpha	A0A0K1Y8F0	Streptomyces_phage	3.6e-180	38.0
WP_018063001.1\|2889696_2890776_+	porin	NA	NA	NA	NA
WP_018063003.1\|2891745_2892540_+	sel1 repeat family protein	NA	NA	NA	NA
WP_018063004.1\|2892592_2893384_-	exodeoxyribonuclease III	NA	NA	NA	NA
WP_018063005.1\|2893870_2895220_+	purine permease	H9YQ34	environmental_Halophage	8.9e-18	41.9
WP_018063006.1\|2895716_2896049_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	8.3e-18	44.8
WP_018063007.1\|2896229_2897447_+	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA
WP_018063008.1\|2897504_2899265_+\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_018063009.1\|2899322_2901509_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_033409423.1\|2901622_2902642_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA
WP_018063011.1\|2902644_2903466_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.1e-34	36.1
WP_018063012.1\|2903462_2904158_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	5.0e-41	45.1
WP_051085064.1\|2904182_2905325_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	3.6e-12	27.3
WP_018063014.1\|2905343_2905559_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	7.0e-10	70.5
WP_018063015.1\|2905599_2906154_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_018063016.1\|2906150_2906969_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	3.7e-51	42.6
WP_018063017.1\|2907517_2907841_+	hypothetical protein	NA	NA	NA	NA
WP_018063018.1\|2907991_2908420_+	hypothetical protein	NA	NA	NA	NA
WP_018063019.1\|2908745_2909123_+	hypothetical protein	NA	NA	NA	NA
WP_079920802.1\|2909554_2910832_+\|bacteriocin	NHLP bacteriocin system secretion protein	NA	NA	NA	NA
WP_018063022.1\|2910848_2913038_+\|bacteriocin	NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit	W8CYL7	Bacillus_phage	4.6e-32	27.0
WP_018063023.1\|2913050_2915891_+\|bacteriocin	NHLP bacteriocin export ABC transporter permease/ATPase subunit	W8CYL7	Bacillus_phage	3.9e-31	25.8
WP_018063024.1\|2915979_2916891_-	ABC transporter permease	NA	NA	NA	NA
WP_018063025.1\|2916887_2917982_-	ABC transporter permease	NA	NA	NA	NA
WP_018063026.1\|2917978_2919490_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-14	27.3
WP_018063027.1\|2919502_2920600_-	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_018063028.1\|2920626_2922006_-	amidohydrolase	NA	NA	NA	NA
WP_018063029.1\|2922006_2922669_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_018063030.1\|2922665_2923499_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_018063031.1\|2923495_2924143_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA
WP_051085068.1\|2924323_2924572_-	hypothetical protein	NA	NA	NA	NA
WP_018063033.1\|2924793_2925309_+	dihydrofolate reductase	J9PU01	Bacillus_phage	3.0e-22	40.7
WP_018063034.1\|2925453_2926599_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_018063035.1\|2926598_2927546_+\|protease	protease modulator HflC	NA	NA	NA	NA

DBSCAN-SWA_6

3330843 : 3344980

Wolbachia_phage(50.0%)

transposase,integrase

attL 3335026:3335049|attR 3359979:3360002

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079920848.1\|3330843_3331785_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	4.6e-29	36.0
WP_026173998.1\|3332053_3333658_-	trigger factor	NA	NA	NA	NA
WP_018067828.1\|3334095_3334869_+	NAD kinase	NA	NA	NA	NA
3335026:3335049	attL	NA	NA	NA	NA
WP_018067827.1\|3335250_3336228_-	AAA family ATPase	NA	NA	NA	NA
WP_018067826.1\|3336232_3338575_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_018067825.1\|3338571_3339321_-	hypothetical protein	NA	NA	NA	NA
WP_157624638.1\|3339737_3340301_-\|transposase	transposase	NA	NA	NA	NA
WP_026173651.1\|3340442_3341279_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_026174004.1\|3341482_3342592_+	TniQ family protein	NA	NA	NA	NA
WP_155122068.1\|3342679_3343782_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_085986588.1\|3343881_3344980_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.7e-46	40.4
3359979:3360002	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3786590 : 3840163

Paracoccus_phage(20.0%)

head,transposase,tail,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079920906.1\|3786590_3787529_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	9.2e-22	31.1
WP_018066565.1\|3787881_3788316_-	DUF1489 family protein	NA	NA	NA	NA
WP_018066566.1\|3788369_3789782_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_026173789.1\|3790385_3791096_+	DUF599 family protein	NA	NA	NA	NA
WP_018066568.1\|3791092_3792019_+	DUF1624 domain-containing protein	NA	NA	NA	NA
WP_033410834.1\|3792041_3792431_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_018066570.1\|3792486_3793905_-	magnesium transporter	NA	NA	NA	NA
WP_018066571.1\|3794384_3796961_+	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	8.4e-09	29.2
WP_018066572.1\|3797656_3797800_+	DUF1127 domain-containing protein	NA	NA	NA	NA
WP_018066573.1\|3797929_3799042_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_026173791.1\|3799071_3799770_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_018066575.1\|3799896_3801390_+	AMP nucleosidase	NA	NA	NA	NA
WP_018066576.1\|3801390_3802296_-	hypothetical protein	NA	NA	NA	NA
WP_018066577.1\|3802385_3804044_-	electron transfer flavoprotein-ubiquinone oxidoreductase	NA	NA	NA	NA
WP_018066578.1\|3804274_3805063_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_018066579.1\|3805074_3805908_+	uracil-DNA glycosylase	A0A2H4P750	Pseudomonas_phage	6.9e-05	26.6
WP_155122138.1\|3806053_3806245_+	hypothetical protein	NA	NA	NA	NA
WP_155122139.1\|3806360_3807650_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_018066582.1\|3807798_3808632_-	hypothetical protein	NA	NA	NA	NA
WP_018066583.1\|3808848_3810129_+	MFS transporter	NA	NA	NA	NA
WP_018066584.1\|3810139_3811084_-	DMT family transporter	NA	NA	NA	NA
WP_018066585.1\|3811248_3813891_+	aminopeptidase N	NA	NA	NA	NA
WP_155122140.1\|3814118_3815762_+	hypothetical protein	NA	NA	NA	NA
WP_018066587.1\|3815768_3818720_-	bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA	NA	NA	NA
WP_018066588.1\|3818780_3820205_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_026173792.1\|3820208_3820898_-	response regulator transcription factor	NA	NA	NA	NA
WP_018066590.1\|3821018_3822557_-	Do family serine endopeptidase	A0A1B1IT49	uncultured_Mediterranean_phage	1.4e-30	33.4
WP_018066591.1\|3822663_3823122_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_018066592.1\|3823118_3825113_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_018066593.1\|3825109_3825559_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_018066594.1\|3825555_3826692_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
WP_018066595.1\|3826803_3827229_-	hypothetical protein	NA	NA	NA	NA
WP_018066596.1\|3827352_3828732_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_018066597.1\|3828728_3829391_-	response regulator transcription factor	NA	NA	NA	NA
WP_018066598.1\|3829430_3829673_-	hypothetical protein	NA	NA	NA	NA
WP_018066599.1\|3829854_3830061_-	hypothetical protein	NA	NA	NA	NA
WP_018066600.1\|3830077_3833917_-	glycoside hydrolase TIM-barrel-like domain-containing protein	A0A0K1LLC1	Rhodobacter_phage	1.2e-208	38.0
WP_018066601.1\|3833926_3834364_-	C40 family peptidase	F4YXU4	Roseobacter_phage	1.2e-29	43.0
WP_018066602.1\|3834360_3835251_-	DUF2163 domain-containing protein	A0A0B5A5B8	Paracoccus_phage	9.5e-61	44.4
WP_018066603.1\|3835247_3835877_-	DUF2460 domain-containing protein	A0A0B5A2K3	Paracoccus_phage	3.7e-51	46.9
WP_018066604.1\|3835886_3836465_-\|tail	phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	5.0e-10	38.6
WP_079920912.1\|3836474_3836663_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_018066606.1\|3836689_3837046_-	gene transfer agent family protein	NA	NA	NA	NA
WP_018066607.1\|3837042_3837453_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_018066608.1\|3837487_3837895_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_018066609.1\|3837891_3838221_-\|head	phage head closure protein	NA	NA	NA	NA
WP_018066610.1\|3838220_3838787_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_026173794.1\|3838930_3840163_-\|capsid	phage major capsid protein	Q3HQT0	Burkholderia_phage	4.8e-79	43.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP020331

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

135673 : 188928

Bacillus_virus(28.57%)

transposase,integrase

attL 136442:136473|attR 171565:171596

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079921024.1\|135673_136441_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
136442:136473	attL	NA	NA	NA	NA
WP_155122282.1\|137563_137773_-	PLP-dependent transferase	NA	NA	NA	NA
WP_018067545.1\|137841_138096_-	hypothetical protein	NA	NA	NA	NA
WP_018067544.1\|138243_139335_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_033411284.1\|139431_140715_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_018067542.1\|140831_141722_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_018067541.1\|141721_142558_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_018067540.1\|142554_143439_+	ROK family protein	NA	NA	NA	NA
WP_018067539.1\|143435_144182_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_018067538.1\|144203_144995_+	sugar isomerase domain-containing protein	NA	NA	NA	NA
WP_018067537.1\|145170_146283_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	2.3e-24	31.4
WP_018067536.1\|146348_147065_-	cysteine hydrolase	NA	NA	NA	NA
WP_155122258.1\|147254_148256_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_018067534.1\|148276_149059_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.3e-31	36.5
WP_155122259.1\|149048_149903_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_018067532.1\|150009_150750_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_155122283.1\|150726_151431_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_018067529.1\|152825_154622_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_051085187.1\|154755_156903_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
WP_018067527.1\|156925_159235_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
WP_018067526.1\|159302_159806_+	acetone carboxylase subunit gamma	NA	NA	NA	NA
WP_018067525.1\|159984_161022_+	zinc-dependent alcohol dehydrogenase family protein	E3SJ82	Synechococcus_phage	1.3e-16	25.5
WP_026173950.1\|162446_164189_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_155122260.1\|164250_166140_+	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.5e-23	34.3
WP_018067521.1\|166136_167111_+	ABC transporter permease	NA	NA	NA	NA
WP_018067520.1\|167107_168067_+	ABC transporter permease	NA	NA	NA	NA
WP_018067519.1\|168082_169879_+	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	6.8e-82	33.6
WP_079921026.1\|169884_171564_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_018067733.1\|172587_174276_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
171565:171596	attR	NA	NA	NA	NA
WP_155122284.1\|174235_175762_+	carbohydrate kinase	NA	NA	NA	NA
WP_026173978.1\|175785_177066_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_018067736.1\|177129_178002_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_018067737.1\|177989_178805_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_018067738.1\|178816_179905_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-24	33.2
WP_026173979.1\|179921_180914_+	hypothetical protein	NA	NA	NA	NA
WP_018067740.1\|180935_181889_+	sugar-binding transcriptional regulator	NA	NA	NA	NA
WP_079921027.1\|182112_182577_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_157624629.1\|182545_182833_+\|transposase	transposase	NA	NA	NA	NA
WP_155122262.1\|183271_184489_-	NAD-binding protein	NA	NA	NA	NA
WP_026173980.1\|184754_185252_+	DUF2165 domain-containing protein	NA	NA	NA	NA
WP_018067746.1\|185462_185975_+	hypothetical protein	NA	NA	NA	NA
WP_018067747.1\|186044_186242_-	hypothetical protein	NA	NA	NA	NA
WP_155122109.1\|186481_186865_+\|transposase	transposase	NA	NA	NA	NA
WP_079920786.1\|186861_187206_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_079920784.1\|187335_188928_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	7.9e-74	36.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP020332

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP020330

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP020331

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection