CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019987	Citrobacter werkmanii strain BF-6 plasmid unnamed, complete sequence	0 crisprs	csa3,DinG	0	0	0	0
NZ_CP019986	Citrobacter werkmanii strain BF-6 chromosome, complete genome	0 crisprs	DEDDh,DinG,cas3,csa3,WYL,RT	0	0	9	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

24 : 62159

Enterobacteria_phage(30.0%)

terminase,tail,portal,protease,tRNA,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079226141.1\|24_528_+	DNA-binding protein	U5P4K1	Shigella_phage	4.0e-56	66.2
WP_079222986.1\|700_880_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.3e-14	73.1
WP_079222988.1\|869_1736_+	GntR family transcriptional regulator	U5P0A0	Shigella_phage	1.9e-34	87.8
WP_079222990.1\|1732_3052_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	8.1e-117	52.3
WP_003034741.1\|3048_3435_+	RusA family crossover junction endodeoxyribonuclease	A0A192Y8N5	Salmonella_phage	4.1e-61	89.1
WP_001704138.1\|3448_4132_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	3.0e-62	60.0
WP_079222992.1\|4128_5124_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.7e-141	69.3
WP_079222995.1\|5145_5799_+	antitermination protein	NA	NA	NA	NA
WP_079222996.1\|6028_6814_+	hypothetical protein	NA	NA	NA	NA
WP_079222997.1\|6908_7295_+	hypothetical protein	A0A192Y8P2	Salmonella_phage	5.2e-56	92.2
WP_079222998.1\|7281_7563_+\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	5.3e-18	50.0
WP_033816615.1\|7562_8180_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	1.3e-93	80.4
WP_079222999.1\|8176_8716_+	DUF2514 domain-containing protein	A0A0A0P0G7	Enterobacteria_phage	1.1e-06	40.7
WP_079223000.1\|8745_8943_+	hypothetical protein	K7PHC3	Enterobacterial_phage	2.0e-27	93.8
WP_079223001.1\|8999_9191_-	hypothetical protein	NA	NA	NA	NA
WP_079223002.1\|9513_10002_+	DUF1441 family protein	K7PJY2	Enterobacterial_phage	9.8e-76	93.2
WP_079223003.1\|10001_12104_+\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	87.4
WP_069324714.1\|12100_12316_+	hypothetical protein	A5LH28	Enterobacteria_phage	2.6e-25	81.4
WP_079223004.1\|12312_13818_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	2.7e-257	86.6
WP_079223006.1\|13762_15787_+\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	85.3
WP_079226142.1\|15878_16205_+	DUF2190 family protein	K7PJY3	Enterobacterial_phage	2.1e-29	59.3
WP_000933904.1\|16197_16473_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.6e-25	61.5
WP_079223009.1\|16485_17040_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	9.1e-62	77.3
WP_079223012.1\|17036_17435_+\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	8.0e-44	63.6
WP_079223014.1\|17442_18180_+\|tail	phage tail protein	O64327	Escherichia_phage	3.4e-88	65.7
WP_079223016.1\|18216_18624_+\|tail	phage minor tail protein G	K7PM17	Enterobacteria_phage	5.0e-25	59.3
WP_079223018.1\|18632_18953_+\|tail	phage tail assembly protein T	K7PHE1	Enterobacteria_phage	1.6e-34	69.8
WP_079223021.1\|18930_21447_+\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	0.0e+00	70.3
WP_079223023.1\|21450_21798_+\|tail	phage tail protein	K7PJT2	Enterobacteria_phage	4.0e-39	68.7
WP_079223024.1\|21794_22550_+\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	4.8e-130	86.1
WP_079223025.1\|22551_23262_+	peptidase P60	K7P6F5	Enterobacteria_phage	1.3e-137	92.4
WP_079223031.1\|23291_23633_+	hypothetical protein	K7PLP0	Enterobacteria_phage	2.4e-52	89.4
WP_079223045.1\|23676_24282_+\|tail	tail assembly protein	K7PGY0	Enterobacteria_phage	1.6e-99	96.5
WP_079223046.1\|24335_27521_+	host specificity protein J	O64335	Escherichia_phage	0.0e+00	86.8
WP_079223047.1\|27520_27841_+	hypothetical protein	K7PJS1	Enterobacterial_phage	7.7e-21	49.5
WP_079223048.1\|27840_28521_+	hypothetical protein	T2DR06	Escherichia_virus	2.1e-28	37.6
WP_079223049.1\|28580_29822_+\|tail	phage tail protein	A0A1V0E5M2	Salmonella_phage	5.0e-108	52.7
WP_079223050.1\|29955_30198_-	DinI family protein	Q6UAW0	Klebsiella_phage	7.6e-29	75.3
WP_079223051.1\|30275_30695_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.0e-34	55.1
WP_079223052.1\|30696_31965_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.1e-203	81.3
WP_079223053.1\|31957_32629_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.5e-79	59.9
WP_079223055.1\|32954_33875_-	hypothetical protein	NA	NA	NA	NA
WP_137361384.1\|34479_35643_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_079223059.1\|35650_37837_-	type I secretion system permease/ATPase	F2Y2R6	Organic_Lake_phycodnavirus	2.1e-16	26.7
WP_079223061.1\|37833_39243_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_079223063.1\|39313_50788_-	BapA prefix-like domain-containing protein	NA	NA	NA	NA
WP_043017973.1\|51356_51839_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.0e-28	46.8
WP_071888166.1\|51981_52437_+	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_038642768.1\|52420_52717_+	RnfH family protein	NA	NA	NA	NA
WP_003826401.1\|52767_53112_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_079223065.1\|53261_54923_-	DNA repair protein RecN	NA	NA	NA	NA
WP_042313284.1\|55008_55887_-	NAD(+) kinase	NA	NA	NA	NA
WP_038642760.1\|56009_56603_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_154050530.1\|56652_57942_-	DUF21 domain-containing protein	NA	NA	NA	NA
WP_042313291.1\|57960_58752_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_006687321.1\|58918_60280_+	signal recognition particle protein	NA	NA	NA	NA
WP_003031228.1\|60531_60780_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_003031230.1\|60798_61347_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003031232.1\|61391_62159_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_2

568083 : 576503

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079223478.1\|568083_569031_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	1.5e-08	26.1
WP_079223481.1\|569014_569746_+	ABC transporter permease	NA	NA	NA	NA
WP_003027354.1\|569726_569834_-	protein YohO	NA	NA	NA	NA
WP_079223483.1\|569885_570617_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.0e-105	92.5
WP_042307365.1\|570842_572528_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	3.5e-282	91.8
WP_042307368.1\|572524_573244_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_042307978.1\|573290_573761_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	6.3e-64	76.9
WP_079223485.1\|573805_574264_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	7.8e-51	69.9
WP_079223487.1\|574469_576503_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	5.2e-54	27.6

DBSCAN-SWA_3

612610 : 621726

Bacillus_phage(28.57%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042307417.1\|612610_614557_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	4.8e-41	42.2
WP_003036813.1\|614631_614856_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	3.6e-17	62.7
WP_079223508.1\|615179_615500_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.9
WP_042307424.1\|615530_617807_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.1e-164	42.0
WP_042307426.1\|618076_619438_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	2.8e-205	93.4
WP_043016895.1\|619603_620326_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	7.1e-30	33.2
WP_061382035.1\|620322_621726_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	2.0e-33	30.5

DBSCAN-SWA_4

663543 : 671807

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079223547.1\|663543_664929_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	2.3e-21	34.5
WP_079223549.1\|665103_665997_+	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	9.6e-45	40.1
WP_079223551.1\|666399_667680_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	A0A218MKK1	uncultured_virus	4.2e-09	23.0
WP_079223553.1\|667715_668747_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	A0A2K9L4U8	Tupanvirus	3.7e-72	45.5
WP_079223555.1\|668749_669838_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.2e-91	49.7
WP_079223557.1\|669834_670704_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.2e-108	66.7
WP_079223559.1\|670700_671807_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2P1ELT3	Moumouvirus	4.0e-16	23.8

DBSCAN-SWA_5

874095 : 885304

Enterobacteria_phage(41.67%)

integrase,holin,terminase,tail

attL 876310:876337|attR 893544:893571

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038641397.1\|874095_874326_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	58.8
WP_038641395.1\|874469_874844_+	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_061381113.1\|874847_875717_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_042307834.1\|875737_876076_+	YebY family protein	NA	NA	NA	NA
876310:876337	attL	NA	NA	NA	NA
WP_079226154.1\|876412_877462_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.1e-127	66.9
WP_079223723.1\|877358_877928_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	3.5e-93	92.2
WP_079223724.1\|877927_878134_+	hypothetical protein	K7PJT9	Enterobacteria_phage	5.6e-25	75.8
WP_079223726.1\|878136_878745_+	protein NinG	A0A0M4RU10	Salmonella_phage	1.6e-46	66.2
WP_016156248.1\|878741_878879_+	YlcG family protein	K7PHH3	Enterobacteria_phage	9.2e-16	88.4
WP_079223728.1\|878875_879556_+	antiterminator	I6PDF8	Cronobacter_phage	1.6e-63	54.0
WP_079223729.1\|879655_880108_-	hypothetical protein	NA	NA	NA	NA
WP_079223735.1\|880285_880564_+\|holin	holin	K7P6H9	Enterobacteria_phage	2.8e-43	96.7
WP_079223736.1\|880535_881084_+	lysozyme	K7PM52	Enterobacteria_phage	7.1e-99	94.0
WP_079223737.1\|881109_881490_-	VOC family protein	NA	NA	NA	NA
WP_079223738.1\|882022_882220_+	hypothetical protein	K7PHC3	Enterobacterial_phage	2.9e-26	89.2
WP_079223739.1\|882303_882588_+	hypothetical protein	NA	NA	NA	NA
WP_154050543.1\|882882_883143_-	hypothetical protein	NA	NA	NA	NA
WP_079226155.1\|883171_883744_+\|terminase	terminase small subunit	I6PDJ6	Cronobacter_phage	2.2e-63	71.7
WP_079223741.1\|884710_885304_+\|tail	tail assembly protein	G8C7R3	Escherichia_phage	5.2e-79	79.4
893544:893571	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1038373 : 1110390

Enterobacteria_phage(44.68%)

integrase,capsid,terminase,tail,head,portal,protease

attL 1038357:1038372|attR 1081906:1081921

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1038357:1038372	attL	NA	NA	NA	NA
WP_079223861.1\|1038373_1039501_-\|integrase	tyrosine-type recombinase/integrase	O21940	Phage_21	7.5e-103	50.1
WP_044691230.1\|1039493_1039727_-	excisionase	NA	NA	NA	NA
WP_079223864.1\|1039778_1042250_-	exonuclease	K7P6V4	Enterobacteria_phage	8.7e-112	38.8
WP_079226162.1\|1042391_1042718_-	transcriptional regulator	NA	NA	NA	NA
WP_079223866.1\|1043197_1043635_-	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	3.3e-38	61.2
WP_071698699.1\|1043724_1043955_+	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	3.2e-21	63.2
WP_079223869.1\|1043957_1044512_+	hypothetical protein	M9NZI6	Enterobacteria_phage	4.2e-14	33.0
WP_079223872.1\|1044565_1045372_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	3.9e-61	50.2
WP_032943874.1\|1045374_1046115_+	ATP-binding protein	H6WRX8	Salmonella_phage	3.5e-93	67.9
WP_016150448.1\|1046134_1046551_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_079226163.1\|1046556_1046895_+	DUF977 family protein	H6WRX9	Salmonella_phage	3.9e-15	45.7
WP_079223874.1\|1046891_1047194_+	hypothetical protein	A0A192Y7N1	Salmonella_phage	2.5e-21	70.5
WP_079223876.1\|1047195_1047615_+	HNH endonuclease	E7EKU5	Edwardsiella_phage	3.2e-59	74.1
WP_079223877.1\|1047611_1047791_+	hypothetical protein	NA	NA	NA	NA
WP_079223879.1\|1047922_1048705_+	hypothetical protein	NA	NA	NA	NA
WP_079223880.1\|1048829_1049030_+	hypothetical protein	NA	NA	NA	NA
WP_032944444.1\|1049281_1049515_+	DinI family protein	K7PM44	Enterobacteria_phage	6.2e-28	72.7
WP_079223882.1\|1049560_1049806_+	hypothetical protein	H6WRY6	Salmonella_phage	1.7e-20	62.2
WP_079223884.1\|1049934_1050135_+	hypothetical protein	H6WRY8	Salmonella_phage	6.1e-16	60.0
WP_154050547.1\|1050137_1050497_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.7e-40	62.7
WP_079223886.1\|1050493_1051534_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.8e-95	50.0
WP_079223888.1\|1051548_1052127_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.2e-48	57.8
WP_079223889.1\|1052274_1053414_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_079223891.1\|1053417_1053918_+	DUF4411 family protein	NA	NA	NA	NA
WP_079226165.1\|1054157_1054346_+	hypothetical protein	NA	NA	NA	NA
WP_016150433.1\|1054498_1054777_+	hypothetical protein	K7PGZ9	Enterobacteria_phage	4.3e-44	95.7
WP_079223893.1\|1054748_1055297_+	lysozyme	K7PM52	Enterobacteria_phage	9.9e-101	96.2
WP_079223894.1\|1055293_1055797_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	8.4e-06	35.1
WP_079223896.1\|1055892_1056585_-	hypothetical protein	NA	NA	NA	NA
WP_079223898.1\|1056928_1057474_+\|terminase	terminase small subunit	E4WL18	Enterobacteria_phage	4.7e-95	99.4
WP_079223900.1\|1057448_1059371_+\|terminase	phage terminase large subunit family protein	E4WL19	Enterobacteria_phage	0.0e+00	97.8
WP_003034782.1\|1059370_1059577_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	3.2e-28	95.5
WP_079223902.1\|1059573_1061166_+\|portal	phage portal protein	E4WL21	Enterobacteria_phage	2.2e-289	91.9
WP_079223904.1\|1061146_1062484_+	S49 family peptidase	O64320	Escherichia_phage	6.8e-188	83.2
WP_003826193.1\|1062493_1062826_+\|head	head decoration protein	E4WL24	Enterobacteria_phage	5.0e-47	82.7
WP_003034798.1\|1062893_1063919_+\|capsid	major capsid protein	K7PGW9	Enterobacteria_phage	1.9e-182	92.7
WP_048231661.1\|1063964_1064369_+	DNA-packaging protein	K7PM13	Enterobacteria_phage	2.1e-23	53.7
WP_048231663.1\|1064380_1064734_+\|tail	tail attachment protein	K7P6U9	Enterobacteria_phage	9.0e-47	76.1
WP_079223906.1\|1064743_1065298_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	6.1e-74	90.8
WP_079223908.1\|1065294_1065693_+\|tail	phage tail protein	K7P7G5	Enterobacteria_phage	1.2e-60	82.6
WP_048231668.1\|1065700_1066438_+\|tail	tail fiber protein	O64327	Escherichia_phage	8.1e-90	67.3
WP_079223910.1\|1066474_1066882_+\|tail	phage minor tail protein G	K7PM17	Enterobacteria_phage	1.9e-24	57.9
WP_071524448.1\|1066890_1067211_+\|tail	phage tail assembly protein T	K7PHE1	Enterobacteria_phage	2.7e-34	69.8
WP_079223913.1\|1067188_1069705_+\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	0.0e+00	69.5
WP_008322439.1\|1069708_1070056_+	hypothetical protein	K7PJT2	Enterobacteria_phage	2.3e-39	69.6
WP_079223915.1\|1070052_1070808_+\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	6.3e-130	86.1
WP_049001720.1\|1070809_1071520_+	peptidase P60	K7PGR2	Enterobacteria_phage	2.2e-137	91.9
WP_008784485.1\|1071550_1071886_+	hypothetical protein	NA	NA	NA	NA
WP_032941793.1\|1071937_1072540_+\|tail	tail assembly protein	K7PM97	Enterobacterial_phage	6.0e-75	72.8
WP_079223918.1\|1072594_1076179_+	DUF1983 domain-containing protein	O64335	Escherichia_phage	0.0e+00	88.7
WP_000497432.1\|1078905_1079148_-	DinI family protein	Q6UAW0	Klebsiella_phage	3.4e-29	76.6
WP_079223932.1\|1079225_1079645_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	6.1e-34	55.1
WP_079223934.1\|1079646_1080915_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	5.5e-203	81.0
WP_079223936.1\|1080907_1081579_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	3.1e-80	60.4
WP_079223940.1\|1081953_1083534_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
1081906:1081921	attR	NA	NA	NA	NA
WP_042308060.1\|1084233_1084506_+	hypothetical protein	NA	NA	NA	NA
WP_042308061.1\|1084700_1086173_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.4e-16	30.8
WP_042308062.1\|1086205_1087012_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_042308063.1\|1087011_1088205_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_079226166.1\|1088215_1089574_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	1.3e-37	40.7
WP_038640980.1\|1089577_1091173_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	1.1e-51	39.3
WP_042308066.1\|1091172_1092735_-	anthranilate synthase component 1	NA	NA	NA	NA
WP_012905981.1\|1092829_1092874_-	trp operon leader peptide	NA	NA	NA	NA
WP_154050551.1\|1092997_1093888_+	5'-3' exoribonuclease	NA	NA	NA	NA
WP_042308069.1\|1093884_1094505_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_079223944.1\|1095283_1095727_+	hypothetical protein	NA	NA	NA	NA
WP_079223946.1\|1097491_1099210_-	abortive phage resistance protein	NA	NA	NA	NA
WP_079223949.1\|1099741_1100299_-	recombinase family protein	G8I4U3	Mycobacterium_phage	3.3e-27	39.7
WP_079223951.1\|1100514_1100829_-	hypothetical protein	NA	NA	NA	NA
WP_008324549.1\|1100838_1101186_-	hypothetical protein	NA	NA	NA	NA
WP_046275908.1\|1101357_1101582_+	hypothetical protein	NA	NA	NA	NA
WP_079223953.1\|1101901_1102177_+	hypothetical protein	NA	NA	NA	NA
WP_079223955.1\|1102346_1102850_-	hypothetical protein	NA	NA	NA	NA
WP_008324553.1\|1103110_1103317_+	hypothetical protein	NA	NA	NA	NA
WP_079223957.1\|1105026_1106559_-	DUF3258 domain-containing protein	NA	NA	NA	NA
WP_038640972.1\|1106813_1107689_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_061381239.1\|1107772_1108363_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_079223959.1\|1108359_1109121_-	YciK family oxidoreductase	NA	NA	NA	NA
WP_079223962.1\|1109343_1110390_+\|protease	protease SohB	NA	NA	NA	NA

DBSCAN-SWA_7

1564417 : 1574449

Tupanvirus(28.57%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079224465.1\|1564417_1565197_+	heme ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.3e-10	28.5
WP_042308802.1\|1565193_1566636_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	4.1e-53	37.1
WP_079224467.1\|1566697_1567411_-	EAL domain-containing protein	NA	NA	NA	NA
WP_042308806.1\|1567729_1568194_-	endopeptidase	A0A1V0DZX6	Clostridioides_phage	1.0e-13	37.4
WP_079224470.1\|1568271_1569021_-	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2K9L407	Tupanvirus	5.1e-07	23.9
WP_042308809.1\|1569020_1569572_-	glutathione peroxidase	NA	NA	NA	NA
WP_079224472.1\|1569632_1570613_-	vitamin B12 ABC transporter permease BtuC	A0A2H4IY97	uncultured_Caudovirales_phage	1.1e-14	25.1
WP_003030571.1\|1570758_1571058_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
WP_079224474.1\|1571062_1573450_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003832580.1\|1573465_1574449_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.4e-33	38.5

DBSCAN-SWA_8

1639527 : 1726022

104

Klebsiella_phage(28.57%)

capsid,integrase,terminase,tail,head,portal,tRNA,holin

attL 1710581:1710599|attR 1731809:1731827

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061381486.1\|1639527_1640043_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_042308914.1\|1640168_1640615_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_042308917.1\|1640619_1641390_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_042308919.1\|1641489_1642677_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_042308921.1\|1642714_1643422_-	CTP synthase	NA	NA	NA	NA
WP_042308923.1\|1643620_1643968_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_079224523.1\|1643975_1644227_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_079224525.1\|1644413_1645439_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	5.5e-12	26.1
WP_038640017.1\|1645486_1645585_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_137349652.1\|1645587_1645662_+	protein YoaJ	NA	NA	NA	NA
WP_042308928.1\|1645710_1645959_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_079224527.1\|1646320_1648468_+	formate dehydrogenase subunit alpha	NA	NA	NA	NA
WP_042308932.1\|1648520_1649165_-	hypothetical protein	NA	NA	NA	NA
WP_003832433.1\|1649385_1649568_-	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_061381493.1\|1649571_1649934_-	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_079226177.1\|1650107_1650746_-	leucine efflux protein LeuE	NA	NA	NA	NA
WP_079224529.1\|1650885_1651536_-	metal-binding protein ZinT	NA	NA	NA	NA
WP_042308939.1\|1651624_1652215_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_079224531.1\|1652198_1652993_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_061381496.1\|1652986_1653799_-	ABC transporter permease	NA	NA	NA	NA
WP_061381523.1\|1653788_1654763_-	ABC transporter permease	NA	NA	NA	NA
WP_061381497.1\|1654762_1656349_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_042308947.1\|1656778_1658866_+	TonB-dependent receptor	NA	NA	NA	NA
WP_042309317.1\|1659207_1659498_+	lipoprotein bor	C6ZCX3	Enterobacteria_phage	1.8e-21	51.5
WP_042308948.1\|1659626_1659833_-	hypothetical protein	NA	NA	NA	NA
WP_079224533.1\|1659999_1661523_-	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
WP_042308953.1\|1661760_1662033_+	hypothetical protein	NA	NA	NA	NA
WP_079224535.1\|1662182_1662722_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	4.7e-39	72.2
WP_061381500.1\|1662922_1663165_+	DinI family protein	Q6UAW0	Klebsiella_phage	3.8e-28	75.3
WP_079224537.1\|1663565_1664423_+	protein YibB	NA	NA	NA	NA
WP_079224540.1\|1664601_1665852_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	9.4e-22	94.4
WP_079224543.1\|1666053_1666677_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_042308976.1\|1666686_1667148_+	NUDIX hydrolase	NA	NA	NA	NA
WP_061381741.1\|1667201_1668308_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_042309320.1\|1668342_1668984_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_016153410.1\|1668987_1670358_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.7e-107	44.6
WP_167371267.1\|1670649_1670955_+	hypothetical protein	A0A2H4J5W2	uncultured_Caudovirales_phage	1.3e-17	52.8
WP_048241099.1\|1671272_1671923_-	hypothetical protein	NA	NA	NA	NA
WP_079224551.1\|1672665_1674225_-	EAL domain-containing protein	NA	NA	NA	NA
WP_080700411.1\|1674524_1674638_+	DinI-like family protein	S4TND2	Salmonella_phage	3.6e-10	81.1
WP_079224553.1\|1674888_1675314_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	8.0e-50	70.7
WP_079224556.1\|1675326_1676616_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.1e-165	69.2
WP_079224558.1\|1676660_1676981_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	3.8e-20	50.0
WP_075146256.1\|1677066_1677765_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	3.8e-89	68.5
WP_038641316.1\|1678495_1679107_+	hypothetical protein	NA	NA	NA	NA
WP_079224560.1\|1679160_1679448_+	hypothetical protein	NA	NA	NA	NA
WP_038641319.1\|1679735_1680467_+	HNH endonuclease	NA	NA	NA	NA
WP_079224562.1\|1681380_1681965_-	DUF4376 domain-containing protein	Q7BQC6	Enterobacteria_phage	2.3e-47	46.9
WP_079224564.1\|1681976_1683944_-	hypothetical protein	A0A2D1UII2	Escherichia_phage	3.5e-23	51.2
WP_079224566.1\|1683985_1687375_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	69.8
WP_079224569.1\|1687446_1688124_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	8.0e-76	73.3
WP_079224571.1\|1688021_1688756_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.9e-116	77.0
WP_079224573.1\|1688767_1689463_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.6e-95	71.4
WP_079224576.1\|1689471_1689804_-\|tail	phage tail protein	A0A0P0ZDL9	Stx2-converting_phage	6.9e-41	67.9
WP_079224578.1\|1689804_1693107_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	64.3
WP_071993054.1\|1693106_1693334_-	hypothetical protein	Q6UAW9	Klebsiella_phage	9.0e-24	65.3
WP_079224580.1\|1693354_1693717_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.4e-26	55.9
WP_003832379.1\|1693779_1694262_-	hypothetical protein	Q6UAX0	Klebsiella_phage	6.1e-62	80.6
WP_032943069.1\|1694295_1694697_-	hypothetical protein	Q6UAX1	Klebsiella_phage	6.8e-59	88.0
WP_042309009.1\|1694693_1695083_-	hypothetical protein	Q6UAX2	Klebsiella_phage	3.9e-43	65.3
WP_003832373.1\|1695051_1695402_-\|head	phage head closure protein	Q6UAX3	Klebsiella_phage	2.4e-44	75.7
WP_003832371.1\|1695398_1695716_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	2.8e-39	79.6
WP_044700565.1\|1695696_1696074_-	hypothetical protein	Q6UAX5	Klebsiella_phage	3.2e-18	59.5
WP_079224583.1\|1696171_1697458_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	1.8e-209	87.6
WP_079224585.1\|1697531_1698452_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	8.7e-134	79.4
WP_079224587.1\|1698488_1699748_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	2.2e-220	89.3
WP_079224589.1\|1699747_1699927_-	hypothetical protein	Q6UAX9	Klebsiella_phage	4.7e-12	63.2
WP_079224591.1\|1699920_1701642_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	7.0e-193	58.6
WP_042309017.1\|1701641_1702076_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	1.2e-29	61.1
WP_003841965.1\|1702309_1702825_+	hypothetical protein	A0A077K9U2	Edwardsiella_phage	1.4e-32	48.2
WP_079224593.1\|1702960_1703323_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	4.4e-57	88.3
WP_032943057.1\|1703599_1704139_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	1.3e-44	80.0
WP_079224595.1\|1704510_1704684_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_000756041.1\|1704888_1705119_-	hypothetical protein	NA	NA	NA	NA
WP_079226178.1\|1705192_1705381_-	cold-shock protein	NA	NA	NA	NA
WP_079224597.1\|1705391_1705604_-	cold shock protein CspG	A0A1W6JNX5	Morganella_phage	4.6e-22	72.9
WP_079224599.1\|1705995_1706139_-	DUF2514 family protein	NA	NA	NA	NA
WP_079224601.1\|1706176_1706374_-	hypothetical protein	K7PHC3	Enterobacterial_phage	8.3e-26	87.7
WP_000990801.1\|1706764_1706995_-	hypothetical protein	NA	NA	NA	NA
WP_079224603.1\|1706991_1707507_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	5.6e-05	30.5
WP_079224606.1\|1707503_1708052_-	lysozyme	K7PM52	Enterobacteria_phage	7.6e-101	96.2
WP_079224608.1\|1708023_1708302_-\|holin	holin	K7P6H9	Enterobacteria_phage	1.6e-43	97.8
WP_044700587.1\|1708455_1708644_-	hypothetical protein	NA	NA	NA	NA
WP_079224612.1\|1709523_1710159_-	hypothetical protein	H9C175	Pectobacterium_phage	5.3e-82	73.8
WP_154050578.1\|1710155_1710515_-	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	6.8e-42	61.9
WP_044700593.1\|1710517_1710718_-	hypothetical protein	H6WRY8	Salmonella_phage	1.2e-16	60.0
1710581:1710599	attL	NA	NA	NA	NA
WP_071681812.1\|1710847_1711093_-	hypothetical protein	H6WRY6	Salmonella_phage	2.9e-20	63.0
WP_038641360.1\|1711138_1711372_-	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-33	87.0
WP_079224614.1\|1711659_1712751_-	permease	NA	NA	NA	NA
WP_079224617.1\|1712850_1713147_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_038641366.1\|1713214_1713640_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	4.3e-51	70.7
WP_038641369.1\|1713652_1714942_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	9.6e-171	73.8
WP_079224619.1\|1714988_1716740_-	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_038641374.1\|1716757_1717120_-	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_038641375.1\|1717167_1717521_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	4.8e-24	51.9
WP_079224621.1\|1717644_1718316_-	replication protein	A0A0U2JGJ0	Escherichia_phage	1.3e-65	76.2
WP_079224625.1\|1719265_1719820_-	hypothetical protein	NA	NA	NA	NA
WP_032949519.1\|1719822_1720038_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	1.3e-16	54.8
WP_032949520.1\|1720139_1720529_+	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	3.5e-36	60.8
WP_071681809.1\|1720914_1721229_-	hypothetical protein	NA	NA	NA	NA
WP_038643238.1\|1721514_1721841_+	transcriptional regulator	NA	NA	NA	NA
WP_079224627.1\|1721982_1724454_+	exonuclease	K7P6V4	Enterobacteria_phage	5.6e-111	38.6
WP_003832298.1\|1724520_1724736_+	DUF1233 family excisionase	A0A0U2RY08	Escherichia_phage	1.7e-19	54.9
WP_048235615.1\|1724735_1726022_+\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	5.5e-110	50.4
1731809:1731827	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4918769 : 4929425

Salmonella_phage(44.44%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079226132.1\|4918769_4919816_+	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A2P1EI66	Megavirus	4.8e-19	42.3
WP_079226133.1\|4920377_4921289_+	hypothetical protein	NA	NA	NA	NA
WP_079226134.1\|4921293_4921620_+	STAS-like domain-containing protein	NA	NA	NA	NA
WP_079226135.1\|4921630_4922248_+	hypothetical protein	NA	NA	NA	NA
WP_079226136.1\|4922239_4923412_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	2.6e-146	67.3
WP_065554929.1\|4923617_4924187_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	5.6e-91	81.8
WP_079226137.1\|4924516_4925065_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	7.2e-43	70.6
WP_079226138.1\|4925294_4925882_-	hypothetical protein	K7PLZ3	Enterobacterial_phage	9.7e-46	84.3
WP_049015418.1\|4925878_4926133_-	hypothetical protein	NA	NA	NA	NA
WP_001253787.1\|4926129_4926306_-	hypothetical protein	NA	NA	NA	NA
WP_079226139.1\|4926293_4926833_-	hypothetical protein	A0A192Y8M4	Salmonella_phage	4.7e-79	79.3
WP_048241176.1\|4926961_4927789_-	YfdQ family protein	Q8HAA2	Salmonella_phage	2.5e-140	90.5
WP_079226140.1\|4927846_4928218_-	hypothetical protein	Q8HAA1	Salmonella_phage	7.7e-57	90.2
WP_048217445.1\|4928798_4929425_-	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	1.9e-47	49.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage