CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019788	Bartonella sp. JB63, complete genome	1 crisprs	DEDDh	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019788_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019788_1

342068-342164

Orphan

Consensus_repeat	Method
AAACCTCCTAGCATTCCAGGTTTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019788_1

>merge|NZ_CP019788|1|342068-342164|CRISPRCasFinder
AAACCTCCTAGCATTCCAGGTTTTGCTCCAAGATTAGGAGCTGTTGTTCTTGGTCGTGGTGCTCCACTTCCTAAACCTCCTGGCATTCCAGGTTTTG

>NZ_CP019788|1|1|342068-342164|CRISPRCasFinder
AAACCTCCTAGCATTCCAGGTTTTG	CTCCAAGATTAGGAGCTGTTGTTCTTGGTCGTGGTGCTCCACTTCCT
AAACCTCCTGGCATTCCAGGTTTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019788.1\|WP_078718706.1\|342759_343719_-\|flagellar-motor-switch-protein-FliM	unknown	unknown	gnl\|CDD\|224781
NZ_CP019788.1\|WP_078718707.1\|343721_344597_-\|flagellar-motor-stator-protein-MotA	unknown	unknown	gnl\|CDD\|181655
NZ_CP019788.1\|WP_078718701.1\|337367_337811_+\|flagellar-protein-FlgN	unknown	unknown	unknown
NZ_CP019788.1\|WP_078718708.1\|344886_345687_+\|DUF1217-domain-containing-protein	unknown	unknown	gnl\|CDD\|369062
NZ_CP019788.1\|WP_078718709.1\|345723_346461_+\|flagellar-basal-body-rod-protein-FlgF	unknown	unknown	gnl\|CDD\|237153
NZ_CP019788.1\|WP_078718705.1\|342311_342767_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019788.1\|WP_078718712.1\|349468_349813_+\|flagellar-hook-basal-body-protein-FliE	unknown	unknown	gnl\|CDD\|179126
NZ_CP019788.1\|WP_078719617.1\|339006_339432_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019788.1\|WP_078718700.1\|336718_337288_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378407
NZ_CP019788.1\|WP_078718713.1\|349849_350644_+\|flagellar-basal-body-rod-protein-FlgG	unknown	unknown	gnl\|CDD\|183686
NZ_CP019788.1\|WP_078719618.1\|339539_340613_-\|flagellar-biosynthesis-protein-FlhB	unknown	unknown	gnl\|CDD\|235569
NZ_CP019788.1\|WP_078718710.1\|348606_348993_+\|flagellar-basal-body-rod-protein-FlgB	unknown	unknown	gnl\|CDD\|168340
NZ_CP019788.1\|WP_078718704.1\|340631_341714_-\|flagellar-motor-switch-protein-FliG	unknown	unknown	gnl\|CDD\|235561
NZ_CP019788.1\|WP_078718711.1\|348995_349412_+\|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl\|CDD\|139220
NZ_CP019788.1\|WP_078718699.1\|335415_336201_+\|flagellar-type-III-secretion-system-protein-FliR	unknown	unknown	gnl\|CDD\|183741
NZ_CP019788.1\|WP_078718702.1\|337807_338275_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019788.1\|WP_153300771.1\|346500_348036_+\|flagellar-protein-export-ATPase-FliI	unknown	unknown	gnl\|CDD\|235666
NZ_CP019788.1\|WP_078718698.1\|333308_335408_+\|flagellar-biosynthesis-protein-FlhA	unknown	unknown	gnl\|CDD\|237205
NZ_CP019788.1\|WP_078718696.1\|330409_331255_+\|TIGR01459-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319827
NZ_CP019788.1\|WP_078718697.1\|331254_332247_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536

Protein	Function_ID	Function_description	E-value
NZ_CP019788.1\|WP_078718706.1\|342759_343719_-\|flagellar-motor-switch-protein-FliM	gnl\|CDD\|224781	COG1868, FliM, Flagellar motor switch protein [Cell motility and secretion].	2.16356e-48
NZ_CP019788.1\|WP_078718707.1\|343721_344597_-\|flagellar-motor-stator-protein-MotA	gnl\|CDD\|181655	PRK09110, PRK09110, flagellar motor stator protein MotA.	1.87778e-157
NZ_CP019788.1\|WP_078718708.1\|344886_345687_+\|DUF1217-domain-containing-protein	gnl\|CDD\|369062	pfam06748, DUF1217, Protein of unknown function (DUF1217). This family represents a conserved region that is found within bacterial proteins, most of which are hypothetical. Some members contain multiple copies.	3.21959e-48
NZ_CP019788.1\|WP_078718709.1\|345723_346461_+\|flagellar-basal-body-rod-protein-FlgF	gnl\|CDD\|237153	PRK12642, flgF, flagellar basal-body rod protein FlgF.	3.15259e-95
NZ_CP019788.1\|WP_078718698.1\|333308_335408_+\|flagellar-biosynthesis-protein-FlhA	gnl\|CDD\|237205	PRK12792, flhA, flagellar biosynthesis protein FlhA; Reviewed.	0
NZ_CP019788.1\|WP_078718712.1\|349468_349813_+\|flagellar-hook-basal-body-protein-FliE	gnl\|CDD\|179126	PRK00790, fliE, flagellar hook-basal body complex protein FliE.	7.40428e-21
NZ_CP019788.1\|WP_078718700.1\|336718_337288_+\|hypothetical-protein	gnl\|CDD\|378407	pfam10135, Rod-binding, Rod binding protein. Members of this family are involved in the assembly of the prokaryotic flagellar rod.	2.61373e-07
NZ_CP019788.1\|WP_078719618.1\|339539_340613_-\|flagellar-biosynthesis-protein-FlhB	gnl\|CDD\|235569	PRK05702, flhB, flagellar type III secretion system protein FlhB.	4.85113e-143
NZ_CP019788.1\|WP_078718710.1\|348606_348993_+\|flagellar-basal-body-rod-protein-FlgB	gnl\|CDD\|168340	PRK06003, flgB, flagellar basal body rod protein FlgB; Reviewed.	1.18648e-57
NZ_CP019788.1\|WP_078718704.1\|340631_341714_-\|flagellar-motor-switch-protein-FliG	gnl\|CDD\|235561	PRK05686, fliG, flagellar motor switch protein G; Validated.	6.23699e-95
NZ_CP019788.1\|WP_078718711.1\|348995_349412_+\|flagellar-basal-body-rod-protein-FlgC	gnl\|CDD\|139220	PRK12782, flgC, flagellar basal body rod protein FlgC; Reviewed.	5.70557e-78
NZ_CP019788.1\|WP_078718699.1\|335415_336201_+\|flagellar-type-III-secretion-system-protein-FliR	gnl\|CDD\|183741	PRK12780, fliR, flagellar biosynthesis protein FliR; Reviewed.	2.28999e-87
NZ_CP019788.1\|WP_153300771.1\|346500_348036_+\|flagellar-protein-export-ATPase-FliI	gnl\|CDD\|235666	PRK06002, fliI, flagellar protein export ATPase FliI.	0
NZ_CP019788.1\|WP_078718713.1\|349849_350644_+\|flagellar-basal-body-rod-protein-FlgG	gnl\|CDD\|183686	PRK12691, flgG, flagellar basal body rod protein FlgG; Reviewed.	6.52843e-145
NZ_CP019788.1\|WP_078718696.1\|330409_331255_+\|TIGR01459-family-HAD-type-hydrolase	gnl\|CDD\|319827	cd07525, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.52398e-91
NZ_CP019788.1\|WP_078718697.1\|331254_332247_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.20251e-128

>NZ_CP019788.1|WP_078718704.1|340631_341714_-|flagellar-motor-switch-protein-FliG
MTQVKQTKTTEEINAISDNISSDTENSSTIIDTLSGQQKVAALLVALGKPAAARLLKHFTPDDLRRLSGQAHTLPNISLADFEILVRQFEDAFAEGVSFSEAGAKFDNLVQETLPEDEAALVFDPSKAPALPQESIWDIIKKLNIDILQKHLVQEHPQVISYIISRLPSEIAAKILIAQTMSVRGDLTRRRLHLRTVSPEIETLLDQVLRPILLKNNDEGDEAHHSQIAIIFNELDKEDIDEMLASLDNLNPEDIEKIKAKLFVFEDIPRLTERARLLLFDGIAADTIITALRGAEDLMKELILNSLSQRTRRMVETELSTENEAIKQEAVINARRSIAQTAIKLSEQGTINLLGEEGTS
>NZ_CP019788.1|WP_078719618.1|339539_340613_-|flagellar-biosynthesis-protein-FlhB
MSDEKPDKESQTEEPTEYKIRKEEEKGNLPFSRELPIFASLVSFSFICVFISFPAISKLTFFLVQWLEHPESWRINTAEDVKHLIYLVGGSIGLALAPILILIPLLSIIASAVQNVPRFVIERIRPQWSRVSPANGFKRIYSKAGLVEFLKSLTKLIGVSLVVYMIFFKSNTIFINAILTDASALPEYIRKELISLSLSFTVTVVALVGLDIAWSRFHWRQQLRMTKQEIKEEHKNLEGNPMVKARMRSLARDRTRRRMIANVPKATLIVTNPTHFSVALRYKPPLDYAPVVIAKGQDILALHIREIAIEHDIPIFENVTLARTLYKQVEIDQTIPTELYESVAALIRFINNQKSNK
>NZ_CP019788.1|WP_078719617.1|339006_339432_-|hypothetical-protein
MKKNYIIEIREMALAKQVAQFIPELRLIDVGDFIACIHAERFNYLSDLIESATELRFYPHTMRFARNASYELDWNTTPSILLHMEFSNEGVNAFFRIFMSAEEFGVELDNCIFDNPSDEETNTSAFMNALNNARIQKPLPH
>NZ_CP019788.1|WP_078718702.1|337807_338275_+|hypothetical-protein
MIRMIAMGLWVCLVALGALVLGIRMSAVDPNSLEETSPIAVEIGSNNTEIMSVPVLVDGDVQGYVIVQLTYVVDKTVEKEISIPIGVLINDTIFQYFWGSYSDVRAIEKVKFQMIKKRIIDDVNQRFSKVVLKDLLVKQFNYLSVDKIRGMKNTQ
>NZ_CP019788.1|WP_078718701.1|337367_337811_+|flagellar-protein-FlgN
MSVTQYNDENITLKTKILNNDLIGRDWAMTKLTTAIKGLSEVVDYESNMLENHGVPDYEEINLRKTRGLRDLNKSMNDIKRYMDQDIETEVQTLLTSLQDKLNRNSELLRIHLEAVRDLSRIMQVAARAEETDGTYDPVLVNAGHFK
>NZ_CP019788.1|WP_078718700.1|336718_337288_+|hypothetical-protein
MAIQPPSDIVLDVARAADPFEYRASINKLYSLQKVQRTQAIEGEGNSFANLANIDSASAVRDSLTSDRIVQQTHLKPQSIENKEAAVFRDFEAFVLQTFVESMFGTDIQSIFGKGQAGQIWKSMMAEQLAKEFAISGGIGIAQMLVSDQMRKETDSSMSELETNQALDTKDHRLLADAVIYKNELDLTR
>NZ_CP019788.1|WP_078718699.1|335415_336201_+|flagellar-type-III-secretion-system-protein-FliR
MSLTSFLPLTSFSIEQLVTIAVLIFSRVGACLMLMPGMSSVRIPMGLRLFISISFSLAILPMISDSFKTLGDKPDLVLLISALFAEMLIGATFGVIAHAYLWALQFMSSIIGMSLGFSGQPGHSIVDSTPESHVANILVFTATMLFFTSDLHIVTIQGLLASYDIVPLAFIPNPEAALTDYREALSHTFLTTLSIAAPFIIYAILINITIGLLNKLTPTIPVYFISLPFVMCGGLFLLYILMPELLHLFNSELHDWLKKGP
>NZ_CP019788.1|WP_078718698.1|333308_335408_+|flagellar-biosynthesis-protein-FlhA
MQQHSPIINIANQDKFSGRDVAFAAGIIIILTVLFLPVPAFVLDLGLSFSIAFSVLILMVSLWIQRPLDFSAFPTVLLIATLLRLSLNIATTRVILTHGNEGYKAAGNVIQGFSQFVMGGDFVIGLVVFAILIIVNFLVITKGATRIAEVGARFTLDAIPGKQMAIDADLSSGLIDEKEAQHRRQELEEESSFFGAMDGASKFVRGDAIAGLIITAVNIFGGIVIGVTRHGMSLSGAADVFTKLSVGDGLVTQIPALIVSLAAGLLVSKGGTRGSAEKAVLGQLGGYPKALFVSSLLLLMLGLMPGLPSFPFLLLSALMALIGYSIPRRLKREALAKEALHEKENQIAQREESQSVKASLEIVQIEIAMGKQLSQHLLPQKVELANRVAKMRRKFAQEYGFVIPEIQISDDYTVPGKSYWIKLYGTVIASYEMRIGDVLIMPGNKPIPNIPGEYVSEPAFGMRAFSTSETFRSELMREGYMAVDNLSVLLTHLSEVLRNNLAQLFSYKDMRILLERLGNEYRKLLEEICPAHLSYSGLQSILKLLLSERVSIRNLNLILEAVAEIAPHVRRCELIAEHVRLRMSQQICGDLSENGILNVLRMGNYWDLVFHKALKRDTKGDIIEFDINPVELEKFGTDATKLIRQYMEKATRFVLITSPEARPYVRMIIERLFPTLPVLSHAEIARGVEVKTLGTISKG
>NZ_CP019788.1|WP_078718697.1|331254_332247_+|bifunctional-riboflavin-kinase/FAD-synthetase
MFDFLRLQEYNLLPLAWRGSVLAIGNFDGVHLGHQAVLQKALDLSHQKKRPALVLTFEPHPKSFFQGSASVDRLTQAAEKAEIFKTLGFHGVIEQPFDAQFSALSADEFITVVLKQAFDVSVVVTGDNFRFGCQKSGNLSFLRQRGKEYGFEVVQIPCLCIGQEQTISSSFIRKLLLKGLVSQVAHLLGYHYRVSSNVVQGEKLGRRLGFPTANQFLPPQTSLADGVYAVRFRRANGALHDGIASFGRRPTVVVNGASVLETYLFNFNDDLYGENCTVSFLQFLREQKKFDRLESLITQMQHDAREAQIVLKTKQPLSLLDRILTFKNTP
>NZ_CP019788.1|WP_078718696.1|330409_331255_+|TIGR01459-family-HAD-type-hydrolase
MKELTHIDPLIGQYDAVFCDVWGVVHNGVQIFETAVQALKKIRQMGKSIILLTNSPRPQEEVAIQLQRMQVDTECYDAIVTSGDVTRDLICSAPRKVFFIGPKRDLVLLEGLSCELVKEWEASAIVCSGFLEDLEATPNAYEEMFHRLRERNLPFICANPDIIVHFGSQEIWCAGSLAHLYQKLGGEVRIAGKPHAPIYECAFKKLQKICGLVNKNRVLAIGDGLLTDVKGAIHFGLDSLYIMGGIHHKDYGHNGVVDKEALHTFFDLYGYQPYAVMWMLQ
>NZ_CP019788.1|WP_078718705.1|342311_342767_-|hypothetical-protein
MFNFVSALLALASLSVLIITTRKLAATIQMGRELAKQVQIGTACLDQALSTLREEHQEFRDENRKMDARMIESTRIRRDIDRSISHMENVRDQLKSDFNQLRGILTAQAHGPSVASGTTHTLRRQSIVPKGLPVFVQRKVHKAPLNNKIQL
>NZ_CP019788.1|WP_078718706.1|342759_343719_-|flagellar-motor-switch-protein-FliM
MTEQKANEDKAQEGKKQDVLTQHILRAAGLSSDDLMSFQYVFRDAASNLCMRLGNYTSLKFTTDVQSLDTLKNDQITQAIGTEALLIYFNSDRWGDDVIFVLDATLVELATEVFFGASEPMVTNRNGRPFSPTEYKVGETFGKLLAYAIDGVFGVGDGSLLIFKQTCKAQEFNAETFNQSQMFSCTLGVKCGEVETRVNILMPRSCHRPIQEAVTQALRSPEKRTDPLWAKRLKQEVSRSRVRIEAFIQQGSMTLNELSTLKVGQILPLPANAAKQIRLRSGNKSLYKCSLGKIGTSFSIRVTNPIDEEEEMIDELVHV
>NZ_CP019788.1|WP_078718707.1|343721_344597_-|flagellar-motor-stator-protein-MotA
MGVIIGLVIIFGCILGGYVAMGGHLGVLIQPWEFVIILGSAIGTFIVSNPFPAIKDTLKATIEAMKDAVPKQKDFLALLGLLYVLMREMRSKSRSEMEGHIDNPKESTLFQQYPLILKDESLTNFICDYCRLIVMGNTHHFEIEALMDEEIHTISHDSQKPYQAMQNMADALPALGIVAAVLGVVKAMGAISEPPEVLGHLIGAALVGTFAGIFFAYGIFGPIASKIKTVRNKKVRIYIVVKQTLLAYMNGAMPQIALEYGRKTISAKDRPTIDVVEQHAITGQGTEKEVA
>NZ_CP019788.1|WP_078718708.1|344886_345687_+|DUF1217-domain-containing-protein
MISTYTNYRSTIDNMKQTFDRLFQKPQVKRETDYYVKHIIGVKSVDDFLANDKIYNYAMKAYGLEDMIFAKGMIRKVLSDSQYASQLVDKRYRQFAEAFNFSKYGEEATQRESAKTVTVNKYMQQTLEVEAGEVNEGTRLALYFTRTVGGMVKDSILTEKNWAYQILSDKALSAVVFKAFNISENVLTSPIESQKSLLESRMSLKDLQDPKKLEHLIAKFSTMYDVKNQTVVNPTLMILQGSKVGGGLAFSNETIMALQSLKRVGL
>NZ_CP019788.1|WP_078718709.1|345723_346461_+|flagellar-basal-body-rod-protein-FlgF
MQNPIYVGVSGQISLERRMETIAQNMANVNTPGFRAGGMKFDTLISPVAHEQGDRVFFTSAGKGYISTNRGSLVQTGNALDIAITGESYFSMQASFGQVYTRDGRMIMTAEGGLVSVTGLPFLDEGGAPIQLNPAGGTPRIVADGSIYQNNAFVGKIGLFQFQSGTQLRYGPNSSVIPDRAVFQSEGGSGDGVVQGYIESSNVNGVVEMTRLIEVSRAFERVESMLRQQEEMRSKSIQVLSGKNI
>NZ_CP019788.1|WP_153300771.1|346500_348036_+|flagellar-protein-export-ATPase-FliI
MLESQDDSMPEVVLVNVTPTIDSDIDSHFAVSKDTDTNSERLADKADVAIIKEIADSASDTEIIETSPSPTALSRLFDFAKRKDDYYSHLVSQGGVISDVSRGTLVARGLSQSVLLGDTVCVECETQLLRGEIIRVNEESVLIKPYDETVVPVLSASVFPKGPLFVAPDRSWRGRIVNAFGEAIDGKGILSSGSRNMAIETYAPPALQRARVGAGLRTGIKVIDIFTPLCFGQRVGIFSGSGVGKSTLLSMMMQADHFDTVVLALTGERGREVRDMLDDTLQDKLHKLVGVIATGDESPMMRRLAPIMATTIAEYFSSLGDNVLLVVDSVTRYALAAREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGREGKGSITGVYAVLVDGDDHNDPISDAIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASHSWTPEQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHILDQAVFLVPSVYATMKQSPDMPLITDPYEELAKLLKSQ
>NZ_CP019788.1|WP_078718710.1|348606_348993_+|flagellar-basal-body-rod-protein-FlgB
MDSVSLFEMANKQADWLSVRQKAIASNVANANTPGYKARDVDDFKAVLQNKTISMAVTNVHHMDMTENGMEAHIISTENITEVTHSGNDVNLEEEMRKGSDVSREISLNTAIVKAFHRMTIATVKGGA
>NZ_CP019788.1|WP_078718711.1|348995_349412_+|flagellar-basal-body-rod-protein-FlgC
MSDRLIAAEQIATTGLSAQSTRLRIIAENLANANSTGKSPGARPYQRKTVSFEATLNPYIDAQGVYVKRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVIRQARDLVSQTIDLLKG
>NZ_CP019788.1|WP_078718712.1|349468_349813_+|flagellar-hook-basal-body-protein-FliE
MIETLTSVASHNVLDSLGKDSMQMDSLNGQQILPDMLERGNKISFDQVLSEVVEVVGTKLQTAESLSIGRISGSDVGVREVVNSVMEAERSLSTAIALRDKLVQAYLEVSRMQI
>NZ_CP019788.1|WP_078718713.1|349849_350644_+|flagellar-basal-body-rod-protein-FlgG
MVMKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFADLMYVADRAVGIPNMLNQAIIPEGAMIGMGVRTAAVRTVNTQGAFVQTGNALDLAINGNGWFEIQDPNGNVFYTRSGSFNLSETGQIITLDGNLVQPVITIPIGSKNVTVSPDGTVYYQTDADPNAVEAGRLRLVNFVNEVGLEPIGDNLFRETQASGAPVPGDPKDDGYGSIMQAMLESSNVDPVKEMTELIAAQRSYEMNSKVIQASDEMAAVVSKNLR

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

560047 : 568520

uncultured_Mediterranean_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078718862.1\|560047_562963_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	61.5
WP_078718863.1\|563186_563696_+	single-stranded DNA-binding protein	A0A0K1LLZ9	Caulobacter_phage	4.9e-46	58.6
WP_078718864.1\|564092_566864_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	4.1e-102	33.9
WP_078718865.1\|566897_567404_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	5.8e-23	35.0
WP_153300774.1\|567406_568006_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	4.6e-43	53.3
WP_078718866.1\|568010_568520_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	6.5e-46	59.0

DBSCAN-SWA_2

1126396 : 1185305

Sinorhizobium_phage(13.33%)

capsid,tRNA,tail,holin,terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078719236.1\|1126396_1127884_-\|tRNA	histidine--tRNA ligase	A0A2K9L6G5	Tupanvirus	6.5e-30	26.6
WP_078719223.1\|1128346_1129438_+	DUF3792 domain-containing protein	NA	NA	NA	NA
WP_078719238.1\|1136625_1138608_+	M23 family metallopeptidase	A0A2P1JY73	Gordonia_phage	7.6e-18	42.6
WP_078719239.1\|1138864_1140283_-	sensor histidine kinase	NA	NA	NA	NA
WP_078719240.1\|1140508_1141063_-	RNA polymerase sigma factor	A0A0F6TH34	Sinorhizobium_phage	5.6e-19	39.3
WP_078719241.1\|1141059_1141275_-	hypothetical protein	NA	NA	NA	NA
WP_078719242.1\|1141440_1142235_+	response regulator	NA	NA	NA	NA
WP_078719243.1\|1142255_1143266_+	histidine kinase	NA	NA	NA	NA
WP_078719244.1\|1143375_1143669_+	hypothetical protein	NA	NA	NA	NA
WP_078719245.1\|1143797_1144232_+	hypothetical protein	NA	NA	NA	NA
WP_078719246.1\|1144278_1144983_-	DUF4167 domain-containing protein	NA	NA	NA	NA
WP_078719247.1\|1145606_1146512_+	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_078719248.1\|1146673_1147123_-	hypothetical protein	NA	NA	NA	NA
WP_153300760.1\|1147502_1147658_-	hypothetical protein	NA	NA	NA	NA
WP_078719250.1\|1147593_1147845_-	hypothetical protein	NA	NA	NA	NA
WP_078719251.1\|1147844_1148504_-	lysozyme	A0A141GEY9	Brucella_phage	3.1e-48	64.9
WP_078719252.1\|1148625_1148877_-	hypothetical protein	NA	NA	NA	NA
WP_078719253.1\|1149052_1150033_-\|tail	tail fiber protein	D5LGZ0	Escherichia_phage	5.3e-20	36.8
WP_078719254.1\|1150029_1151154_-\|tail	tail fiber domain-containing protein	NA	NA	NA	NA
WP_078719255.1\|1151059_1151641_-	hypothetical protein	NA	NA	NA	NA
WP_078719256.1\|1151989_1153453_-	hypothetical protein	D6PEY0	uncultured_phage	4.7e-49	28.2
WP_078719561.1\|1153453_1154149_-	hypothetical protein	NA	NA	NA	NA
WP_078719257.1\|1154237_1155371_-\|capsid	N4-gp56 family major capsid protein	H2DE40	Erwinia_phage	1.6e-41	32.8
WP_078719258.1\|1155508_1156399_-	hypothetical protein	NA	NA	NA	NA
WP_078719562.1\|1156466_1158284_-\|portal	phage portal protein	A0A248SKZ2	Klebsiella_phage	5.9e-33	24.6
WP_078719259.1\|1158283_1159612_-\|terminase	terminase	A0A088F6U9	Sulfitobacter_phage	7.4e-142	56.0
WP_078719260.1\|1159676_1160009_-	hypothetical protein	NA	NA	NA	NA
WP_078719261.1\|1161098_1163699_-	ATP-dependent chaperone ClpB	A0A2I7SAX5	Vibrio_phage	8.2e-121	34.8
WP_078719563.1\|1164154_1164343_-	DNA gyrase inhibitor YacG	NA	NA	NA	NA
WP_078719262.1\|1164457_1165102_-	septum formation protein Maf	NA	NA	NA	NA
WP_013545481.1\|1165325_1165544_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_078719564.1\|1166084_1166600_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.9e-17	37.4
WP_078719263.1\|1166583_1167699_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_078719264.1\|1168116_1168242_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_153300766.1\|1168367_1169093_+	hypothetical protein	NA	NA	NA	NA
WP_078719266.1\|1169412_1170015_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_078719267.1\|1170018_1170870_+	YmdB family metallophosphoesterase	NA	NA	NA	NA
WP_078719268.1\|1170999_1172292_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_078719269.1\|1172919_1173537_-	exonuclease	A0A1B0VMB3	Pseudomonas_phage	3.4e-33	42.2
WP_078719565.1\|1173771_1173963_-	hypothetical protein	NA	NA	NA	NA
WP_078719270.1\|1173973_1174354_-	hypothetical protein	NA	NA	NA	NA
WP_078719271.1\|1174660_1174978_-	XRE family transcriptional regulator	A0A2L0V128	Agrobacterium_phage	2.2e-20	52.6
WP_078719272.1\|1175399_1176272_+	DUF1376 domain-containing protein	A0A076GD06	Sinorhizobium_phage	5.7e-18	38.7
WP_078719567.1\|1178457_1178988_+	hypothetical protein	NA	NA	NA	NA
WP_078719273.1\|1179638_1180247_+	DedA family protein	NA	NA	NA	NA
WP_078719274.1\|1180259_1180823_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_078719275.1\|1181156_1181963_+	hypothetical protein	NA	NA	NA	NA
WP_078719276.1\|1182072_1182624_+	dUTP diphosphatase	K4JSC8	Caulobacter_phage	4.7e-34	50.6
WP_078719278.1\|1182816_1183293_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_078719279.1\|1183273_1184074_-	tonB-system energizer ExbB	NA	NA	NA	NA
WP_078719280.1\|1184543_1184864_+	DUF883 domain-containing protein	NA	NA	NA	NA
WP_078719281.1\|1184867_1185305_+\|holin	phage holin family protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage