CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP019795	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP1, complete sequence	0 crisprs	DinG,c2c10_CAS-V-U3	0	0	1
NZ_CP019794	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 chromosome, complete genome	10 crisprs	cas8c,cas7,cas4,cas1,cas2,csa3,cas3,cas14j,c2c9_V-U4,DEDDh,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,RT,c2c10_CAS-V-U3,WYL	5	32	25
NZ_CP019796	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence	0 crisprs	cas14j	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

878 : 54866

Paenibacillus_phage(25.0%)

integrase,transposase

attL 3770:3786|attR 59230:59246

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077997683.1\|878_1157_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.4e-15	51.7
WP_077997684.1\|1266_1473_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.6e-19	66.2
WP_077996502.1\|1829_2513_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.4e-117	96.9
WP_077997685.1\|2650_3079_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	7.3e-59	92.8
WP_077997686.1\|3075_3402_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	2.3e-57	98.1
WP_077997687.1\|3516_4434_-\|integrase	tyrosine-type recombinase/integrase	A0A0A7AR08	Bacillus_phage	2.6e-93	57.0
3770:3786	attL	NA	NA	NA	NA
WP_077997688.1\|4580_4832_+	hypothetical protein	NA	NA	NA	NA
WP_077997689.1\|4797_5058_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A125RQ76	Bacillus_phage	2.4e-20	54.7
WP_077997690.1\|5260_5989_+	restriction endonuclease	NA	NA	NA	NA
WP_077997691.1\|6088_6709_-	hypothetical protein	NA	NA	NA	NA
WP_077997692.1\|7040_7688_+	hypothetical protein	NA	NA	NA	NA
WP_077997693.1\|7645_8620_+	hypothetical protein	NA	NA	NA	NA
WP_077997694.1\|9041_10001_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_077997695.1\|10189_11077_+	hypothetical protein	NA	NA	NA	NA
WP_149867821.1\|11439_11706_+	hypothetical protein	A2I2Z6	Vibrio_virus	4.4e-06	48.2
WP_149867822.1\|13215_13536_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077997698.1\|13658_14042_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_077997699.1\|14129_14990_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_077997700.1\|15263_15752_+	GyrI-like domain-containing protein	NA	NA	NA	NA
WP_077997701.1\|15831_17883_+	catalase	A0A2K9L572	Tupanvirus	1.8e-115	40.8
WP_077995397.1\|18613_19837_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
WP_079940845.1\|20737_20935_+	hypothetical protein	NA	NA	NA	NA
WP_077997702.1\|20883_21261_-	YolD-like family protein	NA	NA	NA	NA
WP_077997703.1\|23271_23673_+	hypothetical protein	A0A2H4PB09	Aphanizomenon_phage	1.6e-12	43.0
WP_077997704.1\|23733_23904_+	aspartyl-phosphate phosphatase Spo0E family protein	NA	NA	NA	NA
WP_077997705.1\|24095_24434_+	hypothetical protein	NA	NA	NA	NA
WP_077997706.1\|24488_24896_+	hypothetical protein	NA	NA	NA	NA
WP_077997707.1\|24962_25466_+	hypothetical protein	NA	NA	NA	NA
WP_158672848.1\|25618_26581_+	DUF3895 domain-containing protein	NA	NA	NA	NA
WP_077997709.1\|27149_28205_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0A8WI33	Clostridium_phage	7.9e-14	29.5
WP_077997710.1\|30292_31375_-	hypothetical protein	NA	NA	NA	NA
WP_077997711.1\|31601_32939_-	hypothetical protein	NA	NA	NA	NA
WP_077997712.1\|32951_33317_-	hypothetical protein	NA	NA	NA	NA
WP_077997713.1\|33794_34190_-	hypothetical protein	NA	NA	NA	NA
WP_149867823.1\|34488_35163_+	MobA/MobL family protein	NA	NA	NA	NA
WP_149867824.1\|35495_35948_+	hypothetical protein	NA	NA	NA	NA
WP_077997716.1\|35944_37702_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_077997717.1\|37849_38938_-	hypothetical protein	NA	NA	NA	NA
WP_077997718.1\|38954_39824_-	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_077997719.1\|40240_40870_+	SAF domain-containing protein	NA	NA	NA	NA
WP_077997720.1\|40866_42408_+	hypothetical protein	NA	NA	NA	NA
WP_077997721.1\|42397_43690_+	CpaF family protein	NA	NA	NA	NA
WP_077997722.1\|43694_44555_+	hypothetical protein	NA	NA	NA	NA
WP_077997723.1\|44558_45425_+	hypothetical protein	NA	NA	NA	NA
WP_155121121.1\|45441_45594_+	hypothetical protein	NA	NA	NA	NA
WP_077997724.1\|45603_45957_+	hypothetical protein	NA	NA	NA	NA
WP_077997725.1\|45959_46430_+	hypothetical protein	NA	NA	NA	NA
WP_077997726.1\|46443_46800_+	hypothetical protein	NA	NA	NA	NA
WP_077997727.1\|46818_47778_+	hypothetical protein	NA	NA	NA	NA
WP_077997729.1\|48109_50488_+	hypothetical protein	NA	NA	NA	NA
WP_158676630.1\|50710_51412_+	peptidoglycan DD-metalloendopeptidase family protein	I3PV24	Clostridium_phage	7.8e-18	33.1
WP_077997731.1\|51433_52027_+	hypothetical protein	NA	NA	NA	NA
WP_077997732.1\|52108_53224_+	toprim domain-containing protein	A0A0K1LMQ9	Caulobacter_phage	1.9e-13	26.0
WP_077997733.1\|53410_53806_+\|transposase	IS200/IS605 family transposase	Q332K6	Clostridium_botulinum_C_phage	1.3e-41	63.6
WP_077997734.1\|53810_54866_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0A8WI33	Clostridium_phage	7.9e-14	29.5
59230:59246	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP019794

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019794_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_1

63205-64240

TypeI

Consensus_repeat	Method
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CRT

15 spacers

cas2,cas1,cas4,cas7,cas8c

The CRISPR arrays of NZ_CP019794_1

>merge|NZ_CP019794|1|63205-64240|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCCATGTGGATGCGTGGATTGAAATCCAAGTCTGGTAAACCAATGTTGACCTGCTGGAGTCGCATCCCATGTGGATGCGTGGATTGAAATGGACAACTGGACATATCAAAATGATTGTAGAATTGGTCGCATCCCATGTGGATGCGTGGATTGAAATGCGAAACACCCCACCGTTAATTTCACGCAATTTCCCGTCGCATCCCATGTGGATGCGTGGATTGAAATAGACGGTACGTTAATCGTACCAATGACAAGGAGGTCGCATCCCATGTGGATGCGTGGATTGAAATATTTTCCCATCATTATCCGTGATGGAGATTTTAAGCGTCGCATCCCATGTGGATGCGTGGATTGAAATACCCAAAATCATTTTTTCTGTGTCGGACAGCTCAGTCGCATCCCATGTGGATGCGTGGATTGAAATTTGTGTAAAAAACTGATTTCGAATGAGCGCCAAAGTCGCATCCCATGTGGATGCGTGGATTGAAATCTCATAGATTAAATCTTCCATGCCAAACATTTTACGGTCGCATCCCATGTGGATGCGTGGATTGAAATCAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGACGTCGCATCCCATGTGGATGCGTGGATTGAAATCATGATGATGTCAAAACGCTCAACGATGTCGCCGTGTCGCATCCCATGTGGATGCGTGGATTGAAATTTTCGCATCGGTCACCCTGCGAAAAAATACATAAGTCGCATCCCATGTGGATGCGTGGATTGAAATAATCAATTCAGATTTAGAGTGAAATAGGTCCTCAAGTCGCATCCCATGTGGATGCGTGGATTGAAATAAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAAGTCGCATCCCATGTGGATGCGTGGATTGAAATCGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGAGTCGCATCCCATGTGGATGCGTGGATTGAAATTAAAAAACGAGATGCCAACGGGTCGCCCGGATGTCGCATCCCATGTGGATGCGTGGATTGAAAT

>NZ_CP019794|1|1|63205-64240|PILER-CR
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CCAAGTCTGGTAAACCAATGTTGACCTGCTGGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GGACAACTGGACATATCAAAATGATTGTAGAATTG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GCGAAACACCCCACCGTTAATTTCACGCAATTTCCC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AGACGGTACGTTAATCGTACCAATGACAAGGAG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ATTTTCCCATCATTATCCGTGATGGAGATTTTAAGC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ACCCAAAATCATTTTTTCTGTGTCGGACAGCTCA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTGTGTAAAAAACTGATTTCGAATGAGCGCCAAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CTCATAGATTAAATCTTCCATGCCAAACATTTTACG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGAC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CATGATGATGTCAAAACGCTCAACGATGTCGCCGT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTTCGCATCGGTCACCCTGCGAAAAAATACATAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AATCAATTCAGATTTAGAGTGAAATAGGTCCTCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TAAAAAACGAGATGCCAACGGGTCGCCCGGAT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT

>NZ_CP019794|1|1|63205-64240|CRISPRCasFinder
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CCAAGTCTGGTAAACCAATGTTGACCTGCTGGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GGACAACTGGACATATCAAAATGATTGTAGAATTG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GCGAAACACCCCACCGTTAATTTCACGCAATTTCCC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AGACGGTACGTTAATCGTACCAATGACAAGGAG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ATTTTCCCATCATTATCCGTGATGGAGATTTTAAGC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ACCCAAAATCATTTTTTCTGTGTCGGACAGCTCA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTGTGTAAAAAACTGATTTCGAATGAGCGCCAAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CTCATAGATTAAATCTTCCATGCCAAACATTTTACG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGAC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CATGATGATGTCAAAACGCTCAACGATGTCGCCGT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTTCGCATCGGTCACCCTGCGAAAAAATACATAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AATCAATTCAGATTTAGAGTGAAATAGGTCCTCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TAAAAAACGAGATGCCAACGGGTCGCCCGGAT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT

>NZ_CP019794|1|1|63205-64240|CRT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CCAAGTCTGGTAAACCAATGTTGACCTGCTGGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GGACAACTGGACATATCAAAATGATTGTAGAATTG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GCGAAACACCCCACCGTTAATTTCACGCAATTTCCC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AGACGGTACGTTAATCGTACCAATGACAAGGAG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ATTTTCCCATCATTATCCGTGATGGAGATTTTAAGC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ACCCAAAATCATTTTTTCTGTGTCGGACAGCTCA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTGTGTAAAAAACTGATTTCGAATGAGCGCCAAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CTCATAGATTAAATCTTCCATGCCAAACATTTTACG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGAC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CATGATGATGTCAAAACGCTCAACGATGTCGCCGT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTTCGCATCGGTCACCCTGCGAAAAAATACATAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AATCAATTCAGATTTAGAGTGAAATAGGTCCTCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TAAAAAACGAGATGCCAACGGGTCGCCCGGAT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_077995238.1\|58258_60163_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP019794.1\|WP_077995236.1\|55793_56144_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995244.1\|64902_65307_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP019794.1\|WP_077995241.1\|61683_62715_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP019794.1\|WP_040931863.1\|56188_56614_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_149867654.1\|64593_64899_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|379098
NZ_CP019794.1\|WP_077995240.1\|61027_61687_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP019794.1\|WP_077995239.1\|60177_61038_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP019794.1\|WP_077995248.1\|68168_68396_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|372570
NZ_CP019794.1\|WP_077995235.1\|55231_55411_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379188
NZ_CP019794.1\|WP_077995246.1\|66515_66893_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995249.1\|68459_69680_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019794.1\|WP_077995254.1\|74276_74648_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019794.1\|WP_077995233.1\|53714_53951_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995237.1\|56778_57405_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077997492.1\|65343_65472_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995242.1\|62724_63015_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP019794.1\|WP_149867655.1\|65841_66429_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379174
NZ_CP019794.1\|WP_077995247.1\|67074_67557_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995256.1\|78202_78940_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_077995238.1\|58258_60163_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	7.20886e-177
NZ_CP019794.1\|WP_077995244.1\|64902_65307_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.61715e-19
NZ_CP019794.1\|WP_077995241.1\|61683_62715_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP019794.1\|WP_149867654.1\|64593_64899_+\|IS3-family-transposase	gnl\|CDD\|379098	pfam13276, HTH_21, HTH-like domain. This domain contains a predicted helix-turn-helix suggesting a DNA-binding function.	2.15324e-09
NZ_CP019794.1\|WP_077995240.1\|61027_61687_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.23749e-26
NZ_CP019794.1\|WP_077995239.1\|60177_61038_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	1.96467e-133
NZ_CP019794.1\|WP_077995248.1\|68168_68396_+\|IS3-family-transposase	gnl\|CDD\|372570	pfam13333, rve_2, Integrase core domain.	1.79254e-08
NZ_CP019794.1\|WP_077995235.1\|55231_55411_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	9.31602e-10
NZ_CP019794.1\|WP_077995249.1\|68459_69680_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
NZ_CP019794.1\|WP_077995254.1\|74276_74648_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.43564e-15
NZ_CP019794.1\|WP_077995242.1\|62724_63015_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.10591e-31
NZ_CP019794.1\|WP_149867655.1\|65841_66429_-\|hypothetical-protein	gnl\|CDD\|379174	pfam13415, Kelch_3, Galactose oxidase, central domain.	0.00434338
NZ_CP019794.1\|WP_077995256.1\|78202_78940_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	1.73478e-40

>NZ_CP019794.1|WP_077995242.1|62724_63015_+|CRISPR-associated-endonuclease-Cas2
MLVLITYDVCTTNSDGQRRLRMVSKTCQNYGQRVQNSVFECNVDAAQFASLKIQLIDIIDPEKDSLRFYQLGNNYKNKVEHIGVKESIDLEKPLIF
>NZ_CP019794.1|WP_077995241.1|61683_62715_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKRLLNTLYITQPDVYLSLDGDNILLMKEQEKLGRLPLHNLESIVSFGYTGASPALMGYCADRNISITFLTMSGRFLARVIGQSKGNVVLRKKQYLVSENEGLSAKVARNFIVGKIFNHKWMIERMTRDYPMRIDVDQFKHISRQLSSILLEVRSCEDLERLRGLEGQAAVSYNKVMGQMILQQTDDFYFHSRSRRPPLDNVNAMLSLAYTLLANDMAAALEAVGLDAYVGFLHRDRPGRASMALDVMEELRGVYADKFVLTLINKKMVNKDDFFKKENGAVLMTDDARKKFLDAWQKKKQEKIIHPYLGEKISWGLVPHAQALLLARYLRNDLDEYPPFLWK
>NZ_CP019794.1|WP_077995240.1|61027_61687_+|CRISPR-associated-protein-Cas4
MLLNDEDNYLMLSGIQHFQFCKRQWALIHIEQQWEENVRTIEGQHLHRNADNPFTREKRGNKLVIRSMSVRSHELKLTGICDVVEFIKDPRGVEISGAEGKYLAYPVEYKRGKPKTDESDLLQLAAQAICLEEMLLCEVQTGYIFYKEIMHRVEVQLTDDIKQKVRLVAAEMQEYYTRRYTPKVKTGSFCKSCSLLSICLPALMNKRSVKSYIEGKIQE
>NZ_CP019794.1|WP_077995239.1|60177_61038_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MATLDHKIDFAVIFSVTKANPNGDPLNGNRPRQNYDGHGEISDVAIKRKIRNRLQDIGESIFVQSNDRSTDSFKSLRERAEANEALAKIIKAKDGSNEEFARLACEEWIDVRSFGQVFAFKGSGDKGVSVGVRGPVSIHTATSVDPIDITSMQITKSVNSEPGKAKGSDTMGMKHRVDFGVYVFYGSINTQLAEKTGFTNEDAEKIKQALITLFENDASSARPEGSMEVLKVYWWEHQSKLGQYSSAKVHRLLSVKANKEEPRSIEDYTISLNELDRLKVEIIDAP
>NZ_CP019794.1|WP_077995238.1|58258_60163_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYESNLDRVGVAEKKNKDQEFTLLPISHTTQTAHIEVTVTEEGEFHSASIIDKSDASTLIPCTEDSSSRSGSKVAPYPLHDKLSYVAGDFKAYGGQVKKEDPFIEYIKQLGDWAASPYGHAKVKSIFNYLKKGQLIGDLVKHRILAVDENNLLIGKWHDKYSSLYGEKPKIFSVLSGGQESAFVRFNVSNSLKDVWKDQEMYESFIGFYNHKLGDEKLCYVTGNMLPSTEKHANKIRNAADKAKLISANDSSGFTYRGRFHDSKEVASISYDVSQKAHNALKWLIHRQGKIIDQRVFLVWANDAPVLPGPEEDAFSLGFGSLVKVEKKSFTNKEFANEVAKALDGYKNNLASSKSNVNLLILDSATTGRMAVLYYRNMDKELYFDRLTKWHTSCVWLHRYRKDQNGDYVQFYGAPATKDIAYAAYGPKANDKVVKGLMERMLPCIVDERKIPSDIIKSAFHRASNPVSMEKWEWEKTLSITCALINKEEGYEVALDKQIDDRSYLFGRMLAVADVLERRALGSEETRATNAIRYMNSFSQHPERTWRVIQASLQPYQARLGAKGYYLSSLIDEIASKLKCEDFNNKPLSGKYLLGFYSQRHELYQKKEKDTESNVSPDENSEHSN
>NZ_CP019794.1|WP_077995237.1|56778_57405_-|hypothetical-protein
MKEVIKVNRFTKKQAGIVGFALLFIVIGLVFFYIGRSSASHELDGKALTIANVQKETEEANAKLKEASDAYKEIEDKFKGAKVVIDIANTRKSDADRYQKEAEKYEKLAGEKKAELDKIESAIKEKKEAPIVLPAGNLTGGKDIPAGRYKVTKAGSRGSNFIINTASGDLKVSTIIHGGDHGVSEYIATIDSGDLLECHASFKFTPVE
>NZ_CP019794.1|WP_040931863.1|56188_56614_-|hypothetical-protein
MNIKEMYDLVKKIYAENVRTPDNWDNGFEFIGLRFEDKEREIGEICECSRHNSDREDEREFPEYGTEEYWEMEELNGTSAWDMAHKNTYEYSSWDAEQEDCRRCFLTEHCYVIAGNNVRNHSDADYGEIVIEDAVVIAKIF
>NZ_CP019794.1|WP_077995236.1|55793_56144_-|hypothetical-protein
MARKQIWMNPPLEKLAEKCGKANGREGKFSARLGDVVERFDILMKLTPVPELTDVEKMILGEVVCGSALSPVTVKYMPESIMDAATGTEEERMTLRDKVITWSAAERIAAIESLGV
>NZ_CP019794.1|WP_077995235.1|55231_55411_+|helix-turn-helix-transcriptional-regulator
MSHRELSRRTGIRLASINEMCLNKTQRLPLENLAAICEVLGVGITDVLELVDEEKTTGE
>NZ_CP019794.1|WP_077995233.1|53714_53951_+|hypothetical-protein
MTESPYFVINTYVKFQYSQTFFADNPFRETVKTFKYTDKPQPKDVFMRAKAELERKIPFKYREFDWEPPQKTLRVNFV
>NZ_CP019794.1|WP_149867654.1|64593_64899_+|IS3-family-transposase
MKVPRSTYYYMKNKKVMKKTVSEGRPAPGYSYQANGTKVPDEHQEWLMELISSDGFAYGYRKLTVCLRREYQLQINKKKVYRLCKNLDILRPQRQKPVVYP
>NZ_CP019794.1|WP_077995244.1|64902_65307_+|DDE-type-integrase/transposase/recombinase
MARNRTVTDSNQLFETYIKYGFITGEERFFFIQSCIDVYDRSIVAFHIGLSCEAKDVASTLQSALMKRQLFVALEKPVIRSDNGPQFISHAFQQACTSFGVEHERIPPKTPNMNAHIESFHRLLQDECLARYEF
>NZ_CP019794.1|WP_077997492.1|65343_65472_+|hypothetical-protein
MRYYNERRIHSSIHDLSPYEFYDKNQKQLISIIKKDAHHQKR
>NZ_CP019794.1|WP_149867655.1|65841_66429_-|hypothetical-protein
MKLEGFLREFTKEGDKLYIFADLIAKEKSVLYVLDIPSEKVINTIPLPEGVADDMVVYQDKVVLATKTSLTVVDRSDWKVSTVKLSYPDVRPVSLYNRNGHLYVALRSDVDLSGLKLIKMDSNFKEISKVDLGIVHSGGDQFKDDKYYVYSGEGDPEKKFSGELSVYQLDTWEKIGSLILPIGPKKFNVSGFTVL
>NZ_CP019794.1|WP_077995246.1|66515_66893_-|hypothetical-protein
MKKKKKKYGLMLAILATAIVITCFIMVKDGAGKSGLQITKTGEVPGDIIYTYGHPLNSPSEVVWIKDGHYQHHTILKGAIGIGYIQADKKGNLWTPSTRNNKLYKLTPDYKLKQVQRQGKLKNSK
>NZ_CP019794.1|WP_077995247.1|67074_67557_-|hypothetical-protein
MNFLPKEELERADRVFKEFSESWNNDIPEENLKQKGFSDEELKKMKRTKRSVGGSTMTREARRDILITKDQKLIWRHGHAGVVYNDSYVVEALPAPDNVDYQYIGKWKWPDYPGAYETVKGMYVVDKNGNKAEQKYYTWAGSNAGYHVGKPYNSTFVNMY
>NZ_CP019794.1|WP_077995248.1|68168_68396_+|IS3-family-transposase
MLPKTGYEGRSQISMVSSLMKRLIKNGPMESFWGTLKCEKYYLHSYSTYEELKKDIDNYIYFYNNERLQAKLKSL
>NZ_CP019794.1|WP_077995249.1|68459_69680_+|IS256-family-transposase
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>NZ_CP019794.1|WP_077995254.1|74276_74648_+|DDE-type-integrase/transposase/recombinase
MGKGLMYLFNNWYSRKVIDYELSSTLEKSFVLKCLKRAFCRCKPEIMNSDQGCHFTNADYLELLEKEDIKVLMDGKGRARDNSRTEHYFRSPKYECIYLNEFEDPRALRKGIARYVQFYNPPP
>NZ_CP019794.1|WP_077995256.1|78202_78940_-|MerR-family-transcriptional-regulator
MLYTVKEVAALSQVTVKTLHHYHKIELLLPYEISEAGYRLYGVKELERLQQILFYRELDFPLEKIKQLLEGESRLGILSDQKDLLLARKQRLDRLIQTLDQSIECVVKGEVMDQSSMFKGFESEQKWKNALAEHKEYLKETYGLDILEDRPIDVKDMNEKASRADRFMEEMAKALKAGMKFDDETVRGLIREHINFLNQNVHATSAEDFALQARFFLDDDFHRNIMESRQTGLAYYLLPLRNLMR

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Crispr_ID: NZ_CP019794_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_2

77184-78096

TypeI

I-C

Consensus_repeat	Method
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRT

13 spacers

cas2

The CRISPR arrays of NZ_CP019794_2

>merge|NZ_CP019794|2|77184-78096|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAATAAGATCTTTTTGTTTTAATTCTTTTTGTATATCTTGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAGTCATACCAATCAATACCTTGTGCAACAAGGTCGCATCCTACGCGGATGCGTGGATTGAAATTGGAATTCTATTAGCGAAATCCAGTCAACGAGCATTGTCGCATCCTACGCGGATGCGTGGATTGAAATAACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAAGTCGCATCCTACGCGGATGCGTGGATTGAAATTCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGAGTCGCATCCTACGCGGATGCGTGGATTGAAATTATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCCGTCGCATCCTACGCGGATGCGTGGATTGAAATGTCATAAAGGAGCTGATCTAATTGGATGTTTTCGGTCGCATCCTACGCGGATGCGTGGATTGAAATACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTAGTCGCATCCTACGCGGATGCGTGGATTGAAATTTTGATTTTTGTTGAATTGATCATTTTTTATCCCTCGTCGCATCCTACGCGGATGCGTGGATTGAAATGAAAAACAAATACAAAAATAATTACACCAAGAAGTCGCATCCTACGCGGATGCGTGGATTGAAATAGATTTCGGGACCAGCGATGACAAAACGTATGAAGTCGCATCCTACGCGGATGCGTGGATTGAAATCCTTGAAACTCCCAAATTGGTTAATTAAAAAGATCACGTCGCATCCTACGCGGATGCGTGGATTGATAGACCCGATGCCAGAGTACACTGCCCTCCCTGAGTTACATCCTACGCGAATAGTTGAATTGCAAA

>NZ_CP019794|2|2|77184-77964|PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAGATCTTTTTGTTTTAATTCTTTTTGTATATCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAGTCATACCAATCAATACCTTGTGCAACAAG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TGGAATTCTATTAGCGAAATCCAGTCAACGAGCATT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GTCATAAAGGAGCTGATCTAATTGGATGTTTTCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTTGATTTTTGTTGAATTGATCATTTTTTATCCCTC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GAAAAACAAATACAAAAATAATTACACCAAGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATTTCGGGACCAGCGATGACAAAACGTATGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT

>NZ_CP019794|2|2|77184-78096|CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAGATCTTTTTGTTTTAATTCTTTTTGTATATCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAGTCATACCAATCAATACCTTGTGCAACAAG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TGGAATTCTATTAGCGAAATCCAGTCAACGAGCATT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GTCATAAAGGAGCTGATCTAATTGGATGTTTTCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTTGATTTTTGTTGAATTGATCATTTTTTATCCCTC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GAAAAACAAATACAAAAATAATTACACCAAGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATTTCGGGACCAGCGATGACAAAACGTATGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CCTTGAAACTCCCAAATTGGTTAATTAAAAAGATCAC
GTCGCATCCTACGCGGATGCGTGGATTGATAG	ACCCGATGCCAGAGTACACTGCCCTCCCTGA
GTTACATCCTACGCGAATAGTTGAATTGCAAA

>NZ_CP019794|2|2|77184-78033|CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAGATCTTTTTGTTTTAATTCTTTTTGTATATCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAGTCATACCAATCAATACCTTGTGCAACAAG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TGGAATTCTATTAGCGAAATCCAGTCAACGAGCATT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GTCATAAAGGAGCTGATCTAATTGGATGTTTTCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTTGATTTTTGTTGAATTGATCATTTTTTATCCCTC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GAAAAACAAATACAAAAATAATTACACCAAGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATTTCGGGACCAGCGATGACAAAACGTATGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CCTTGAAACTCCCAAATTGGTTAATTAAAAAGATCAC
GTCGCATCCTACGCGGATGCGTGGATTGATAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_077995244.1\|64902_65307_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP019794.1\|WP_024094005.1\|88137_89091_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226964
NZ_CP019794.1\|WP_077995256.1\|78202_78940_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_CP019794.1\|WP_077995259.1\|91397_91655_+\|YqkE-family-protein	unknown	unknown	gnl\|CDD\|315655
NZ_CP019794.1\|WP_149867654.1\|64593_64899_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|379098
NZ_CP019794.1\|WP_024094004.1\|87194_88148_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226965
NZ_CP019794.1\|WP_077997492.1\|65343_65472_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995248.1\|68168_68396_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|372570
NZ_CP019794.1\|WP_155116373.1\|81290_81443_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995247.1\|67074_67557_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995249.1\|68459_69680_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019794.1\|WP_077995258.1\|89934_90888_+\|siderophore-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226966
NZ_CP019794.1\|WP_077995254.1\|74276_74648_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019794.1\|WP_023484252.1\|85579_86071_+\|DUF1641-domain-containing-protein	unknown	unknown	gnl\|CDD\|225283
NZ_CP019794.1\|WP_149867656.1\|80930_81134_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995246.1\|66515_66893_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995242.1\|62724_63015_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP019794.1\|WP_149867655.1\|65841_66429_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379174
NZ_CP019794.1\|WP_023484248.1\|89084_89843_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226963
NZ_CP019794.1\|WP_077995260.1\|91685_92825_+\|lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_077995244.1\|64902_65307_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.61715e-19
NZ_CP019794.1\|WP_024094005.1\|88137_89091_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226964	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.35788e-128
NZ_CP019794.1\|WP_077995256.1\|78202_78940_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	1.73478e-40
NZ_CP019794.1\|WP_077995259.1\|91397_91655_+\|YqkE-family-protein	gnl\|CDD\|315655	pfam13025, DUF3886, Protein of unknown function (DUF3886). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There are two completely conserved L residues that may be functionally important.	0.00166542
NZ_CP019794.1\|WP_149867654.1\|64593_64899_+\|IS3-family-transposase	gnl\|CDD\|379098	pfam13276, HTH_21, HTH-like domain. This domain contains a predicted helix-turn-helix suggesting a DNA-binding function.	2.15324e-09
NZ_CP019794.1\|WP_024094004.1\|87194_88148_+\|ABC-transporter-permease	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	2.32823e-148
NZ_CP019794.1\|WP_077995248.1\|68168_68396_+\|IS3-family-transposase	gnl\|CDD\|372570	pfam13333, rve_2, Integrase core domain.	1.79254e-08
NZ_CP019794.1\|WP_077995249.1\|68459_69680_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
NZ_CP019794.1\|WP_077995258.1\|89934_90888_+\|siderophore-ABC-transporter-substrate-binding-protein	gnl\|CDD\|226966	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism].	2.17694e-139
NZ_CP019794.1\|WP_077995254.1\|74276_74648_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.43564e-15
NZ_CP019794.1\|WP_023484252.1\|85579_86071_+\|DUF1641-domain-containing-protein	gnl\|CDD\|225283	COG2427, COG2427, Uncharacterized conserved protein [Function unknown].	9.5598e-20
NZ_CP019794.1\|WP_077995242.1\|62724_63015_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.10591e-31
NZ_CP019794.1\|WP_149867655.1\|65841_66429_-\|hypothetical-protein	gnl\|CDD\|379174	pfam13415, Kelch_3, Galactose oxidase, central domain.	0.00434338
NZ_CP019794.1\|WP_023484248.1\|89084_89843_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226963	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism].	2.38591e-158
NZ_CP019794.1\|WP_077995260.1\|91685_92825_+\|lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	6.48298e-148

>NZ_CP019794.1|WP_077995254.1|74276_74648_+|DDE-type-integrase/transposase/recombinase
MGKGLMYLFNNWYSRKVIDYELSSTLEKSFVLKCLKRAFCRCKPEIMNSDQGCHFTNADYLELLEKEDIKVLMDGKGRARDNSRTEHYFRSPKYECIYLNEFEDPRALRKGIARYVQFYNPPP
>NZ_CP019794.1|WP_077995249.1|68459_69680_+|IS256-family-transposase
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>NZ_CP019794.1|WP_077995248.1|68168_68396_+|IS3-family-transposase
MLPKTGYEGRSQISMVSSLMKRLIKNGPMESFWGTLKCEKYYLHSYSTYEELKKDIDNYIYFYNNERLQAKLKSL
>NZ_CP019794.1|WP_077995247.1|67074_67557_-|hypothetical-protein
MNFLPKEELERADRVFKEFSESWNNDIPEENLKQKGFSDEELKKMKRTKRSVGGSTMTREARRDILITKDQKLIWRHGHAGVVYNDSYVVEALPAPDNVDYQYIGKWKWPDYPGAYETVKGMYVVDKNGNKAEQKYYTWAGSNAGYHVGKPYNSTFVNMY
>NZ_CP019794.1|WP_077995246.1|66515_66893_-|hypothetical-protein
MKKKKKKYGLMLAILATAIVITCFIMVKDGAGKSGLQITKTGEVPGDIIYTYGHPLNSPSEVVWIKDGHYQHHTILKGAIGIGYIQADKKGNLWTPSTRNNKLYKLTPDYKLKQVQRQGKLKNSK
>NZ_CP019794.1|WP_149867655.1|65841_66429_-|hypothetical-protein
MKLEGFLREFTKEGDKLYIFADLIAKEKSVLYVLDIPSEKVINTIPLPEGVADDMVVYQDKVVLATKTSLTVVDRSDWKVSTVKLSYPDVRPVSLYNRNGHLYVALRSDVDLSGLKLIKMDSNFKEISKVDLGIVHSGGDQFKDDKYYVYSGEGDPEKKFSGELSVYQLDTWEKIGSLILPIGPKKFNVSGFTVL
>NZ_CP019794.1|WP_077997492.1|65343_65472_+|hypothetical-protein
MRYYNERRIHSSIHDLSPYEFYDKNQKQLISIIKKDAHHQKR
>NZ_CP019794.1|WP_077995244.1|64902_65307_+|DDE-type-integrase/transposase/recombinase
MARNRTVTDSNQLFETYIKYGFITGEERFFFIQSCIDVYDRSIVAFHIGLSCEAKDVASTLQSALMKRQLFVALEKPVIRSDNGPQFISHAFQQACTSFGVEHERIPPKTPNMNAHIESFHRLLQDECLARYEF
>NZ_CP019794.1|WP_149867654.1|64593_64899_+|IS3-family-transposase
MKVPRSTYYYMKNKKVMKKTVSEGRPAPGYSYQANGTKVPDEHQEWLMELISSDGFAYGYRKLTVCLRREYQLQINKKKVYRLCKNLDILRPQRQKPVVYP
>NZ_CP019794.1|WP_077995242.1|62724_63015_+|CRISPR-associated-endonuclease-Cas2
MLVLITYDVCTTNSDGQRRLRMVSKTCQNYGQRVQNSVFECNVDAAQFASLKIQLIDIIDPEKDSLRFYQLGNNYKNKVEHIGVKESIDLEKPLIF
>NZ_CP019794.1|WP_077995256.1|78202_78940_-|MerR-family-transcriptional-regulator
MLYTVKEVAALSQVTVKTLHHYHKIELLLPYEISEAGYRLYGVKELERLQQILFYRELDFPLEKIKQLLEGESRLGILSDQKDLLLARKQRLDRLIQTLDQSIECVVKGEVMDQSSMFKGFESEQKWKNALAEHKEYLKETYGLDILEDRPIDVKDMNEKASRADRFMEEMAKALKAGMKFDDETVRGLIREHINFLNQNVHATSAEDFALQARFFLDDDFHRNIMESRQTGLAYYLLPLRNLMR
>NZ_CP019794.1|WP_149867656.1|80930_81134_+|hypothetical-protein
MSQVGVSAVMALAFLKTPYYGWGRIAETILGCLVAILVNVVIAPSNNLPKAARSIRKLSEISSNQIH
>NZ_CP019794.1|WP_155116373.1|81290_81443_+|hypothetical-protein
MEPLNDLLGQLAKEPNIELRFTPNLPPLKERIISSNLDFSIIRFRHAKPL
>NZ_CP019794.1|WP_023484252.1|85579_86071_+|DUF1641-domain-containing-protein
MAKSITTITEPVLSEKEANEKAWAEVLEELSRNSEGLRSYIRLLQELHESGIMDTMKAALQSKEELAKVIVKEMNKPNNTNTINNLMAMAGTLSMLDSDVVKKMASSVSTGFHKAREENQTEEKIGLFDLMKALKDPDINRAVRFGLNFLKGMGQSLGEKGEK
>NZ_CP019794.1|WP_024094004.1|87194_88148_+|ABC-transporter-permease
MKLRYLFIALVILSFASVFIGVKEVSPMDMLHLGEEQVQVILISRIPRLVSIIIAGVSMSISGLIMQQISRNKFVSPTTAGTMDFARLGILVSIMLFTTASPLVKMLVAFIFALLGTLLFMKILKRIRFKDTIFIPLVGIMFGNVVSSITTFFAYKYDLIQNINAWLQGDFSMIIKGRYELLYLSIPIVIIAFLYANKFTVAGMGEDFSKNLGVNYNRVVNVGLVIVALVSAVVILTVGTIPFLGLIIPNIVSIYRGDNLRNSLPHTALLGAVFVLFCDILGRIIIFPYEVSISVTVGVIGSIIFLYLLFRRNAYAS
>NZ_CP019794.1|WP_024094005.1|88137_89091_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MHHRRMLGILAGLALILIAVFMLIKVNSNNWDYVIPKRSFKIAAIVLTGSAIAYSSLVFQTITNNRILTPSIMGLDSLYMLIQTFVVFVFGSSHLAMANKNMNFLISVGLMILFAAVLFKILFRRDGNNIYFLLLVGIIFGGLFQSFSSFMQMLIDPNEFQIVQDKMFASFNNINTDILLIAVIGMFLVAAYVFRYTKMLDVLSLGREHAVNLGIPYDKIVKRMLIIVAILVSISTALVGPITFLGLLVVNVTREFLKTYQHKFLIPGSVLISIIALVGGQLIVERVFTFNTTLSVIVNFVGGIYFIYLLLKENKAW
>NZ_CP019794.1|WP_023484248.1|89084_89843_+|ABC-transporter-ATP-binding-protein
MVEVRNVSKQYGNKKVVDQISLEVPKGKITSFIGPNGAGKSTLLSMISRLINKDSGEILIAGKEISEWKSNELAKTMSILKQSNHINIRLTVRELVSFGRFPYSQGNLTGEDENYVDEAIRYMELEEFQNRYLDQLSGGQSQRAFIAMVIAQNTEYIFLDEPLNNLDMKHSVQIMKVLRRLVDELGKTVIIVIHDINFASCYSDYIVALKDGRVIKEGPTTEIMDPRTLKEIYDMDIRIEEIEGKQIGIYFT
>NZ_CP019794.1|WP_077995258.1|89934_90888_+|siderophore-ABC-transporter-substrate-binding-protein
MKKRLSLVVAVLMLAIVVAACGTKNTDEKAAGSASPKEETTVKIKHKLGEIDVKKNPKKVVVFDFGALDTLDKLGVEVTGVPQKSIPSYLDKYKDSKYQNVGGLKEPDFEKINEIKPDLIIISGRQQDSYKQFTEIAPTIYSGVDTDKYMDSFKENVKTLAQIFGKESEAEKELKAIDDSIKQLNEKASASGKNGLIILANDGKVSTYGPKSRFGIIHDVFGVKAVDDKIEVSTHGQSASFEYMAEKNPDYLFVIDRGAVVGGKSSAKQVVENEMIKTTKAYKENHVVYLDPNYWYLSGGGLISVSEMVKEVGAAFK
>NZ_CP019794.1|WP_077995259.1|91397_91655_+|YqkE-family-protein
MAKKKKVHPSKPVQTEKQATLKDLLSPEIQEKLKAQAQEMKAEEEQMKAAQKKQAEETRKAEQKRLDNDFEYLLNNSKIDWKSFK
>NZ_CP019794.1|WP_077995260.1|91685_92825_+|lactonase-family-protein
MNKNGKQLFVFVGSYAEPNEAGIKVYAFHKENGTLTLLDEVYGLKNPTFLNIDAPNRRLYSIAETVIGEGKKAGEAAAFSIDPEMGRLTELNRVLTTDATTCHIQRDEANRYLVVASYHGGKVGLVSLSEDGRIGELLDVQQHVGHGSNPERQDRPHPHSSFFSPDERYLFVPDLGIDRICTYTIDSDRHVLQLHGETKTHPGAGPRHMTFHPNGRYAYVINEVDSTITAFRYAANTGELREIATISTIPEEFAGENTCAEIVTSRDGRFLYGSNRGHDSIAVYAINEQTGALTLVEHVSTEGEHPRHFALIPDGTHMIVANRDTNNIVTFCVDQETGKLKSTGHSVSTSKPVCIQPFYLLAENTLDFNRVDKSASVKV

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Crispr_ID: NZ_CP019794_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_3

1346571-1346672

Orphan

Consensus_repeat	Method
TGTTACTTTGCTGTTACCCCAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019794_3

>merge|NZ_CP019794|3|1346571-1346672|CRISPRCasFinder
TGTTACTTTGCTGTTACTTTGCTGTTACCCCAAACATTTTTGATAGGCTCTAATCCCCTGATATATAAGGGTTTAAGGTGTTACTTTGCTGTTACCCCGAAA

>NZ_CP019794|3|3|1346571-1346672|CRISPRCasFinder
TGTTACTTTGCTGTTACTTTGCTG	TTACCCCAAACATTTTTGATAGGCTCTAATCCCCTGATATATAAGGGTTTAAGG
TGTTACTTTGCTGTTACCCCGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_077995829.1\|1340254_1340611_-\|head-decoration-protein	unknown	unknown	gnl\|CDD\|376964
NZ_CP019794.1\|WP_036654551.1\|1346987_1347191_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP019794.1\|WP_077995836.1\|1347221_1347632_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|374224
NZ_CP019794.1\|WP_077995841.1\|1352421_1353123_-\|dihydroorotate-dehydrogenase-electron-transfer-subunit	unknown	unknown	gnl\|CDD\|99814
NZ_CP019794.1\|WP_188318623.1\|1353350_1353455_-\|sporulation-protein-YjcZ	unknown	unknown	unknown
NZ_CP019794.1\|WP_155121053.1\|1339047_1339197_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995835.1\|1345327_1345840_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226673
NZ_CP019794.1\|WP_077995840.1\|1352054_1352441_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235982
NZ_CP019794.1\|WP_077995832.1\|1341687_1343247_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|377468
NZ_CP019794.1\|WP_149867713.1\|1340607_1340970_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_024094814.1\|1348334_1349645_-\|purine/pyrimidine-permease	unknown	unknown	gnl\|CDD\|183124
NZ_CP019794.1\|WP_077995828.1\|1339210_1340239_-\|major-capsid-protein	unknown	unknown	gnl\|CDD\|377147
NZ_CP019794.1\|WP_036654509.1\|1350404_1351088_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP019794.1\|WP_077995827.1\|1338739_1339051_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995834.1\|1343481_1345344_-\|phage-terminase-large-subunit-family-protein	unknown	unknown	gnl\|CDD\|368649
NZ_CP019794.1\|WP_077995833.1\|1343243_1343465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995831.1\|1340978_1341728_-\|Clp-protease-ClpP	unknown	unknown	gnl\|CDD\|132927
NZ_CP019794.1\|WP_104932621.1\|1351108_1351978_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019794.1\|WP_077995837.1\|1347660_1347864_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995839.1\|1349783_1350413_-\|dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235982

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_024094814.1\|1348334_1349645_-\|purine/pyrimidine-permease	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	3.23666e-66
NZ_CP019794.1\|WP_036654551.1\|1346987_1347191_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	1.8138e-13
NZ_CP019794.1\|WP_077995836.1\|1347221_1347632_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	1.6636e-19
NZ_CP019794.1\|WP_077995841.1\|1352421_1353123_-\|dihydroorotate-dehydrogenase-electron-transfer-subunit	gnl\|CDD\|99814	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.	9.35291e-87
NZ_CP019794.1\|WP_077995828.1\|1339210_1340239_-\|major-capsid-protein	gnl\|CDD\|377147	pfam03864, Phage_cap_E, Phage major capsid protein E. Major capsid protein E is involved with the stabilisation of the condensed form of the DNA molecule in phage heads.	2.21999e-82
NZ_CP019794.1\|WP_077995835.1\|1345327_1345840_-\|hypothetical-protein	gnl\|CDD\|226673	COG4220, COG4220, Phage DNA packaging protein, Nu1 subunit of terminase [DNA replication, recombination, and repair].	7.1697e-06
NZ_CP019794.1\|WP_077995840.1\|1352054_1352441_-\|hypothetical-protein	gnl\|CDD\|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	1.57275e-48
NZ_CP019794.1\|WP_077995832.1\|1341687_1343247_-\|phage-portal-protein	gnl\|CDD\|377468	pfam05136, Phage_portal_2, Phage portal protein, lambda family. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage capsid and the tail proteins.	1.00533e-123
NZ_CP019794.1\|WP_077995829.1\|1340254_1340611_-\|head-decoration-protein	gnl\|CDD\|376964	pfam02924, HDPD, Bacteriophage lambda head decoration protein D.	6.68405e-17
NZ_CP019794.1\|WP_036654509.1\|1350404_1351088_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	7.48767e-10
NZ_CP019794.1\|WP_077995834.1\|1343481_1345344_-\|phage-terminase-large-subunit-family-protein	gnl\|CDD\|368649	pfam05876, Terminase_GpA, Phage terminase large subunit (GpA). This family consists of several phage terminase large subunit proteins as well as related sequences from several bacterial species. The DNA packaging enzyme of bacteriophage lambda, terminase, is a heteromultimer composed of a small subunit, gpNu1, and a large subunit, gpA, products of the Nu1 and A genes, respectively. Terminase is involved in the site-specific binding and cutting of the DNA in the initial stages of packaging. It is now known that gpA is actively involved in late stages of packaging, including DNA translocation, and that this enzyme contains separate functional domains for its early and late packaging activities.	0
NZ_CP019794.1\|WP_077995831.1\|1340978_1341728_-\|Clp-protease-ClpP	gnl\|CDD\|132927	cd07016, S14_ClpP_1, Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP, although the proteolytic subunit alone does possess some catalytic activity. Active site consists of the triad Ser, His and Asp; some members have lost all of these active site residues and are therefore inactive, while others may have one or two large insertions. ClpP seems to prefer hydrophobic or non-polar residues at P1 or P1' positions in its substrate. The protease exists as a tetradecamer made up of two heptameric rings stacked back-to-back such that the catalytic triad of each subunit is located at the interface between three monomers, thus making oligomerization essential for function.	1.08954e-79
NZ_CP019794.1\|WP_104932621.1\|1351108_1351978_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.10138e-47
NZ_CP019794.1\|WP_077995839.1\|1349783_1350413_-\|dihydroorotate-dehydrogenase	gnl\|CDD\|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	9.77917e-99

>NZ_CP019794.1|WP_077995835.1|1345327_1345840_-|hypothetical-protein
MAKGENIHEKEVLTSELAAIVGKTPQWIRQLTRDGALKQVGRGKYRLGEAIQAYILHAAGGKEDDKKPRFIDEKTEHERIKKEKAALELAVMKGELHRAEDVRAEMADMLTSFRSRILGIPTKLGPQLLNISELADVTSILTKEMRSALTALADYDPDKFAEGYRNGPEG
>NZ_CP019794.1|WP_077995834.1|1343481_1345344_-|phage-terminase-large-subunit-family-protein
MDQRGKTRSLFREIARFVAPPADLTVSEWADRYRMLSSEASAEPGPWRTSRAPYQREPMNAITDLRYETIVFKWSAQVGKTEAILNAIGFFTEHDPSSIMAVYPTLEMARAFSKDRLAPMYRDSPKLKAVISQAKSRDSGNSILHKQFPGGQITLAGANSPASLASRPIRIALCDEIDRFPVSAGAEGDPVSLVAKRTTTFWNRKIIKVSTPTIKGSSRIEEDYEDSTMEEWCVPCPSCKEYQPFSWKQIKFEYDEERKKTIRVEHACRSCGALHGEQEWKAGTEETGKWVARKKHSTTRGFHLNELASTFSPWEKIVHNFKKAEKLMKKGDFEAMKVWVNTTLAEVWEEKGEKIDENVLMNRRELYHADVPEGVKVLTAAVDTQDNRFEVEIMGWGAGHESWRIQYHKIYGDLKQPQVWTDLDEFLQRTWEDKEGRQFRIAITCMDSGGHFTNEVYKFCKERLSRRVFAIKGESPGNGTYLPLVAGTSTNNRYKATVVRLGVDEGKSKVMSLLQQKPDQPGYCHFPLTTRDKDRGYNEEYFDGLTAEEVRTRYKMGVPYQVWVKVKARNEPLDLAVYNRAAVEILQPNLDKPLPPPGEKIIGSAPKPKRKRRGMISKGI
>NZ_CP019794.1|WP_077995833.1|1343243_1343465_-|hypothetical-protein
MWTLQEAQTYLRTWIEAEMAVASAQSYTIAGRSLTRAHLAEIRKQIQFWQNEIVKLNNPQRRSRIFRGIPMDI
>NZ_CP019794.1|WP_077995832.1|1341687_1343247_-|phage-portal-protein
MNMLERVISSVSPGWALKREVARQKRSIMNSGYSHHGASRIKKALQGWNFTGGSPDEDILDNLKVLRQRSRDLYMGGASLATGALKTARTNVVGTGLQLKPSLDADFLGLSEQETNTLKRTIEREFALWAESKNCDAMRMNDFCELQQLAFLSMLMSGDCFVLLPVLPRKHTLYDLRVRLIEADRCNTPATGQIDKDIKEGVEVDSDGQVVAYWFSSRHPLSSGGMGKMEWNRVEAFGKRTGRPNVLHLMEAERPEQRRGVPILAPVIESLKQLGTYTHAELMAAVVSGMFTVFVKTESSADPLGGAEEDEFTNESIYKLGNGAIVGLGPNESVETANPGRPNTAYDGFVTSILRQVGSALEIPYELLVKHFTASYSASRAALLEAWKMFRMRRTWLASDFCQPIYEEWFTEAVAKGRIPAPGFFDDPMIRKAYTKAEWHGPSQGQIDPLKEVKAAEKRVENGFSTGERETAELTGGDYEMNIRQLAREKAFREQYGLTNLGGDTDREEVLEYEENSEQ
>NZ_CP019794.1|WP_077995831.1|1340978_1341728_-|Clp-protease-ClpP
MKKFWNMKKTANNNGELTLYGNVSEYSWWGDDITPQQFRDDLYALGEVDDITVRLNSPGGDVFAGLHIYQVLKEHKAKVTVRVEGFAGSIASVIAMAGDQVIMPKGSIMMVHNPWTFTMGEASDLRQTADILDTIRDALVEVYMTKTGLQEDELNALLDSETWMTSAQAVEKGFADEEEQTMQISACLRGRTAIINGLEMDWSQYAQAPDLPKEERKSTDVLGKVQAVLAMPKQEREKIKKKEVQRARI
>NZ_CP019794.1|WP_149867713.1|1340607_1340970_-|hypothetical-protein
MFAQRHPDLYKAAVQAGIEQERCRIKALDELAAVPSARGVIAKAKYETGVTAQEVAVDILKAEKSRIEEAGNQRLSDSQDSGIQNLLPQDSATGGEAEEVEQKASGLAQAMKKIRGGKRA
>NZ_CP019794.1|WP_077995829.1|1340254_1340611_-|head-decoration-protein
MTEKYELKYDNLIAGGVSPVVSKGETVKSGGVYLRGTVLGRITEGGKLVPVDSSKTDGSERPYAVLAETVDAAKEDKAAAVYLTGEFNKDALIFGGSDTVGQHEVVLREIGIFVKTTV
>NZ_CP019794.1|WP_077995828.1|1339210_1340239_-|major-capsid-protein
MPSIYDLRTLISAVRQIPPANTFLGDTLFTESTPFDTEQVEVEFQKGKRKMAPFVSPLLPGKVMDRHGYTTSFFKPALIKPMRAITSIDLNKKLFGQNPFETSSPEERAQELLARDLVELDDYITRREEWMRAQLLFTGKVIQKGDGVDQVLDFDFDNKAVLSGTAVWSNPASDPLGDLGKWRLQVIQKSGITPDVVIMASDVATAFISNEKVQKALENRRINLANIDPKQLANGVTYHGTITSLGLELYSYDDWYLDDETDEELPMVPTGTLAIASTRAKFSMHYGAVTIVSKEEEFSTIRGSRVPQSWVTKEPAQRFLQVSSRPLPMPGNSDSWFVAKVL
>NZ_CP019794.1|WP_155121053.1|1339047_1339197_-|hypothetical-protein
MAIKAIWSIRHDDKEYDPGSILKGLKKEEEKKLVDAGVAEYVGKEPDEK
>NZ_CP019794.1|WP_077995827.1|1338739_1339051_-|hypothetical-protein
MKFKEQMSKDIQTFMCRDEFAEPHILDGREVWMIIEAFTLDGQPLPYAEGVSLHQIIVHVAEDELGYIPAQGQRSDLDGISVSVEKVSVDAGMLKIILEANVA
>NZ_CP019794.1|WP_036654551.1|1346987_1347191_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MVNLNKAYSSREVIKILKEDGWIHKNTEGDHWHFIHPTKKGKVTVPHPKKGLKRRTTKSIFEQAGLI
>NZ_CP019794.1|WP_077995836.1|1347221_1347632_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKYIYPAVFTPGEPDEGGFTVTFPDLPGCITEGDDLEEALHMAKDALGGHLYLMEEDGDEIPRSSQPDSIQLETGEFVSLIQANTDFIRERIQSKAVNKTVTLPKWLNDVAAEEGINFSQTLQDALKQKLEIKDFS
>NZ_CP019794.1|WP_077995837.1|1347660_1347864_-|hypothetical-protein
MKQQIENNFKYHAPKEGQPEKYTAIREKAKELACLIDDLCPSSREKSLGLTNLEQVVMWANAAIARN
>NZ_CP019794.1|WP_024094814.1|1348334_1349645_-|purine/pyrimidine-permease
MKTVFSSIQWVVFILAGSLVAPLAAGHALGLPPEDISSMMQRTFLLIGISGLLQTMFGHRLPLMENPAGLWWGVFTVYAGLIVSGTLGLEAGLQQLEMGMFIAGILFVVIALFKWTDALGRLFTPLVIGTYLLLLVAQLSGSFMKGMMGIGYLGSEEINLRVAVPAILTLILAMVMPRMRWAFLRNYSVLISLFVGWLLFIIFGVSQKQSLADTLFSAPEPFAWGMPQFDPGILLTSVFISLLLLTNMITSIHVMQGVIREKGGEVKPVRHNRTTLIMGVNTALGGVFSAMGCVPISGTAGFVLTTGIYQRLPFIIASFFMIGISFFPVLTSFFSSIPMPVGYATIFVPFASMIGLGLNEYKKIKLDEHNKFILGVSMMVGIGSMFIPAQAIGHLPGLLRTVANNGLILGMVTCIVLEQGRRLLDRKNGKQVSKSR
>NZ_CP019794.1|WP_077995839.1|1349783_1350413_-|dihydroorotate-dehydrogenase
MGHEKMLLLTVNSFIISTVYRKGSISRGISMIELNISCPNVKEGGMAFGIETEIAREVVREVRQATGLPLAVKLSPNARDIVSMAVMCEEEGADAVSLVNTFTGMKIDIQKKQSVFTNLYAGLSGPAIKPIALRMVHQVARHVNIPVIGMGGISSAEDAVEFIMAGASIVQIGTYNFMNLRAGEELVRGLEQYMEREKIQTWDEIRGVV
>NZ_CP019794.1|WP_036654509.1|1350404_1351088_+|helix-turn-helix-domain-containing-protein
MSHKAKVSGSEKIAAVEKYLRGEDSLNHLAALLDVRHSSVRQWLQTYQSLGPNGLLQTSQNASYSAELKRIAVEDYLAGGGSHMDICKRYGIKSTCQLRDWILKYNSHEKLNTSGTGGVPIMTKGRTTTYDERVEIVRFCIEHQHNYAQTADKFQVSYQQVYSWTNKYLTSGVDALQDRRGKRKSEDEMSEVEKLRAQNKLLQAENRRKQMEIDLLKKLDEIERRRF
>NZ_CP019794.1|WP_104932621.1|1351108_1351978_+|IS3-family-transposase
MYLAIRGLRETKSYPICQLCDLIGIQRSSYYKWINRKESINEIFNKALLPMIKDAYEEKDGILGYRQMTIKLNRERHVTVNHKRIYRLMGILGLKSVCRRKRKNYIHSTPEITAENILNRDFESSEFGTKWLTDVTEMKYGNQNKAYLSAILDLSDKSIVSFVVGHSNNNELVFKTFDIAHMTYPDATPLFHSDRGFQYTCKIFKKKLDDAGMIQSMSRVSRCIDNGPMESFWGMMKSEMYYLRKFYTYEELEAAVIEYIDYYNTRRYQKRLNCMTPLEYRQYLLSSAA
>NZ_CP019794.1|WP_077995840.1|1352054_1352441_-|hypothetical-protein
MLDMTCKIAGVTFKNPIVMASGTFGFGKEYAQFYDLSMLGGIALKGLTLQPRCGNSGTRIYETPSGLLNSVGLENPGIKAFLEYDLDELGLLNTVLITNLGGGTLEEYVLGAKLLTDNENKRRALGLR
>NZ_CP019794.1|WP_077995841.1|1352421_1353123_-|dihydroorotate-dehydrogenase-electron-transfer-subunit
MRLVLSNEQVAPDVFWMNIEGDYHGEMGQFYMLRAWDKYPVLSRPISIHDIGKGYISFLYRKVGEGTELLAALKPGDTLMLEGPFGNGYPYTENKVALIGGGMGTAPLLYAAKRLPNADVYLGFSGKSFRVEAFEQAAGKIVVNIGGYIMNDLEPDAYDAVYCCGSLGMMRALAERMKGSRARLYVSLEKRMACGVGACLGCSIATKHGNRKICSDGPVFAAEEVNLYAGHDL
>NZ_CP019794.1|WP_188318623.1|1353350_1353455_-|sporulation-protein-YjcZ
MSGVGGNGYCGFTSTGAILVLFILLVIVSRTWLY

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Crispr_ID: NZ_CP019794_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_4

1637103-1637591

TypeI-A

Consensus_repeat	Method
GTTTCAATACACCTTGTGTTACTGTCAAAC	CRISPRCasFinder
GTTTCAATACACCTTGTGTTACTGTCAAAC	CRT
TTTCAATACACCTTGTGTTACTGTCAAAC	PILER-CR

7 spacers

csa3,c2c9_V-U4

The CRISPR arrays of NZ_CP019794_4

>merge|NZ_CP019794|4|1637103-1637591|CRISPRCasFinder,CRT,PILER-CR
GGGTTTATCCGCCTTGTGTTACTGCCAACATTCAACGTAAACCGACAGAACTCTTGCTGCCGACAATTTCAATACACCTTGTGTTACTGTCAAACCATTGATTCATCTTCTTCACAATCCTCCTCTGCAAGTTTCAATACACCTTGTGTTACTGTCAAACGCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCCGTTTCAATACACCTTGTGTTACTGTCAAACCAATTGCGTTCGGGTTGTGCTTTATACAGTAATTAGTTTCAATACACCTTGTGTTACTGTCAAACCAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAGGTTTCAATACACCATGTGTTACTGTCAAACTCGCAAAAGAATATCTGCAAGATCCCATTTCCAGTGTTTCAATACACCATGTGTTACTGTCAAACTTGACGATTAAATCAAAATCAGACGGATATCCGACAGTTTCAATACACCTCGTGTTACTATCAAAC

>NZ_CP019794|4|4|1637103-1637591|CRISPRCasFinder
GGGTTTATCCGCCTTGTGTTACTGCCAACA	TTCAACGTAAACCGACAGAACTCTTGCTGCCGACA
ATTTCAATACACCTTGTGTTACTGTCAAAC	CATTGATTCATCTTCTTCACAATCCTCCTCTGCAA
GTTTCAATACACCTTGTGTTACTGTCAAAC	GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCC
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTA
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAG
GTTTCAATACACCATGTGTTACTGTCAAAC	TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGT
GTTTCAATACACCATGTGTTACTGTCAAAC	TTGACGATTAAATCAAAATCAGACGGATATCCGACA
GTTTCAATACACCTCGTGTTACTATCAAAC

>NZ_CP019794|4|3|1637103-1637591|CRT
GGGTTTATCCGCCTTGTGTTACTGCCAACA	TTCAACGTAAACCGACAGAACTCTTGCTGCCGACA
ATTTCAATACACCTTGTGTTACTGTCAAAC	CATTGATTCATCTTCTTCACAATCCTCCTCTGCAA
GTTTCAATACACCTTGTGTTACTGTCAAAC	GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCC
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTA
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAG
GTTTCAATACACCATGTGTTACTGTCAAAC	TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGT
GTTTCAATACACCATGTGTTACTGTCAAAC	TTGACGATTAAATCAAAATCAGACGGATATCCGACA
GTTTCAATACACCTCGTGTTACTATCAAAC

>NZ_CP019794|4|3|1637169-1637525|PILER-CR
TTTCAATACACCTTGTGTTACTGTCAAAC	CATTGATTCATCTTCTTCACAATCCTCCTCTGCAAG
TTTCAATACACCTTGTGTTACTGTCAAAC	GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCCG
TTTCAATACACCTTGTGTTACTGTCAAAC	CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTAG
TTTCAATACACCTTGTGTTACTGTCAAAC	CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAGG
TTTCAATACACCATGTGTTACTGTCAAAC	TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGTG
TTTCAATACACCATGTGTTACTGTCAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_077997555.1\|1633021_1633315_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|182138
NZ_CP019794.1\|WP_155121056.1\|1642387_1642537_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_023483464.1\|1640829_1641216_-\|DUF1878-family-protein	unknown	unknown	gnl\|CDD\|370213
NZ_CP019794.1\|WP_077996010.1\|1628378_1630295_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226481
NZ_CP019794.1\|WP_077996013.1\|1633853_1636364_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|163244
NZ_CP019794.1\|WP_149867721.1\|1642526_1643735_-\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_155121057.1\|1644608_1644761_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996017.1\|1643982_1644144_-\|transposase	c2c9_V-U4	-	gnl\|CDD\|223747
NZ_CP019794.1\|WP_036658190.1\|1632719_1632989_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225215
NZ_CP019794.1\|WP_077996015.1\|1641237_1641696_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996012.1\|1632068_1632401_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077995375.1\|1637867_1639091_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019794.1\|WP_077996019.1\|1645401_1646106_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_023483432.1\|1633566_1633857_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP019794.1\|WP_077996014.1\|1639246_1640695_-\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
NZ_CP019794.1\|WP_077996009.1\|1627732_1628347_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP019794.1\|WP_077996011.1\|1630554_1631841_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP019794.1\|WP_077996018.1\|1644750_1645359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_036658187.1\|1636468_1636765_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996008.1\|1627409_1627634_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_077997555.1\|1633021_1633315_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	3.30684e-31
NZ_CP019794.1\|WP_077996009.1\|1627732_1628347_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.37605e-12
NZ_CP019794.1\|WP_023483432.1\|1633566_1633857_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	9.84683e-15
NZ_CP019794.1\|WP_077996013.1\|1633853_1636364_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|163244	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol. [Cellular processes, Detoxification].	2.15442e-159
NZ_CP019794.1\|WP_077996011.1\|1630554_1631841_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.65516e-62
NZ_CP019794.1\|WP_036658190.1\|1632719_1632989_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|225215	COG2336, MazE, Growth regulator [Signal transduction mechanisms].	1.40855e-22
NZ_CP019794.1\|WP_077996010.1\|1628378_1630295_-\|AAA-family-ATPase	gnl\|CDD\|226481	COG3972, COG3972, Superfamily I DNA and RNA helicases [General function prediction only].	2.15696e-17
NZ_CP019794.1\|WP_077996017.1\|1643982_1644144_-\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.30153e-05
NZ_CP019794.1\|WP_023483464.1\|1640829_1641216_-\|DUF1878-family-protein	gnl\|CDD\|370213	pfam08963, DUF1878, Protein of unknown function (DUF1878). This domain is found in a set of hypothetical bacterial proteins.	0.000671324
NZ_CP019794.1\|WP_077996014.1\|1639246_1640695_-\|IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.06528e-32
NZ_CP019794.1\|WP_077995375.1\|1637867_1639091_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.86744e-145

>NZ_CP019794.1|WP_036658187.1|1636468_1636765_+|hypothetical-protein
MKSSFLGIIGVAILALGIGTAVYASEAKPYSSKEMIPDMEQRYPYMDMERMPTRMEQRHPHMDMKQMCTHMEQRHPHMDMEQRRTHMEQRHPQLNYSE
>NZ_CP019794.1|WP_077996013.1|1633853_1636364_+|FAD-dependent-oxidoreductase
MNKKVLIVGGVAGGASAAARLRRLDEDTEIVMFEKGEYVSFANCGLPYYIGDTIQDREKLFVQTPEAMRRRFNIDVRVNSEVTGIDPHTKTIRVQSKERGVYEETYDYLILSPGAKPVRPPLPGIDSVRIHTLRNIPDTDRIKASVTEEGTRSAVVIGGGFIGVEMAENLREIGLDVTLVEAGLQILAPFDPEMAGVLSKELEEQGVRLIIENSVQSFHDKDNYIETVLANGSVLQSDIVILAIGVSPDTAFLRDSGLELGPKGHIIVNNKLETNLDGVYAVGDAVEITDFVTKQKTAIPLAGPANKQGRIAADNICGLDTIYEGSQGTSILKVFGLTGAATGSNEKTLQKLGLPYKVNYVHPNSHASYYPGAAPLTIKLIFNDKGTVLGSQIVGYDGVDKRIDDIATVIRLRGTVTDLTELELAYAPPYSSAKDPVNMAGYTAENILAGRTEVFTPGDLLKRNKETTILVDVRTEMEHRNGHIEGSLSIPIDDLRSRMHELDPNKEIWVYCQVGLRGYTASRILIQHGFKVKNLTGGYKTYQMAQFKPGKVKPPVTPSRLQSETESETVYLSHRWEQQDHTSSAKQPLSFDESLDACGLCCPGPLIQVKQQMDRLQDGQVLKVTASDPGFYEDIQAWAGMCGNPLLQISKLNDGTVEAYIQKESTSAAPVEKTTSQTPIPENSTMVVFSGDLDKAIASFIIANGAASSGKKVTIFFTFWGLNIIRKSEKIPVSKSLIDKMFGAMMPRGSRKLALSKMNMMGMGAKMIRSVMKKNNVSSLEELMETALQQGVEIVACQMSMDVMGIKKEELIDGVRVGGVGYYLGKADKSGINLFI
>NZ_CP019794.1|WP_023483432.1|1633566_1633857_+|winged-helix-turn-helix-transcriptional-regulator
MNNDFERYNEAAELLKALAHPVRLCIVKGLMEKGSCNVSFMQNCLGLPQSTVSQHLQKLRALGIVAAHRTGLEINYSVENEKVKQLVQIFFREESS
>NZ_CP019794.1|WP_077997555.1|1633021_1633315_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MDFNPQIGHEQAGRRPGLVVSPTSFNRVTGFIVVCPITRTVRNYPYEVPLPSDLMTEGVVLAHQVKSLDWKARKAEVREKVPKEIIDDVLDLIHTFL
>NZ_CP019794.1|WP_036658190.1|1632719_1632989_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MGKDRERMSVMSTIVSKWGNSLAIRIPSNLAESLNIKEGSEVELSIMDSTLTIKPKKRKPTLEELLAKITDGNHHEEIDFGKPEGNEVW
>NZ_CP019794.1|WP_077996012.1|1632068_1632401_-|hypothetical-protein
MKILSKALLSSIAAFGLLAGSVSAQTPGQQAVTSQQAGVKSIIVNPLIKLKVGWSTWIGMPGSKVVLVSGEGVVSLDQYGKVVGLSPGNATVYNYAADGNLYINHIQVTY
>NZ_CP019794.1|WP_077996011.1|1630554_1631841_+|MFS-transporter
MNPEPKSATETALLRNRNYRFLLVADILSSPGYYIYIIAVEWLMLTMYDSRSYLGLMLFSSSFARLLFTIYGGIIADRLNRKLIILVTQWGEAFIIAAILLCYITDVISPVFLIVASFLFGILSAFASPAYESIITSIVEKSSLQRGNALLRMANQYSLIIGPLISSTLIVTIGFVGVFSFSLLTILASSLLVSFIQIPDQQSSEHSTSQWDDFKASVAHIRKHQVLPIIMGLGFVMNFFVTGPVAVVVPILAKDILEGNAFVLGMLEVSLGLGFILGSITVSIRKPFNRPGLAILYSLLVMVLAYSALGFVQQLILSMFALLLIGFFIQLMNIPLFTYIQTNTEANMIGKVMSLFISVASGLTPLSFAMVSYLLHLHIDIQLIIRIFGAFLIVITAGTFLISPIRNLTYENSPQGAKQPEKDQGVSS
>NZ_CP019794.1|WP_077996010.1|1628378_1630295_-|AAA-family-ATPase
MAYMIPETIPRRATAGERVLFQTLKDYLPGDYIAYYEPEIKGKKPDFVVIGPDLGLVVLEVKDYTRHTLFSLNRNEWQLHTSSGQITTVSNPYNQARDYAYEIVKVLTRDKNLIQLEGNHIGKLKFQYGYGAVFTRLKQKDFIQNNIHQIIPPEFVFCRDEIDPDEEGFSEEVLMEKLLNMFIVRNPRRKVLSNEDIQAIRYHLFPEVRISAEPVYYQDQLLLSLHDIKTMDLYQENLAKQLGDKHRLIRGVAGSGKTLVLASRTKILARTYPEWRILVLCFGIPLSRSLRQLIDRMMEEADDLIDIIQSSPESGCSPGKQIEVYNFHEWLRNKLNTREELIPQLLGKIEKNETILPTYDAILIDEGQDFESEWLKLLGHMLNPKTQSLLLVEDRAQSIFKRKNSLAQDTGLDFRGRSKILTINYRNTAQIVQFAWDFYRTHSLLQNKVKQGTTEGINIIPPQSTRRQGPEPRIARFDCFVNEIKDVVEHIRKLHREHRIPYGEMLILYRVKNTYKQSYIDIIKSLLKQAHIPYTWITENSESKRNFNRAEQTVKISTIDSAKGLDFRAVFIVNIENMPFVLEEEEEREVSLFYIGMTRSLEWLFLSYSGDSKFTKYLDDIVLKRKSSSIHTQSAIKL
>NZ_CP019794.1|WP_077996009.1|1627732_1628347_+|sigma-70-family-RNA-polymerase-sigma-factor
MDAMTKTVQPSEESIKELLNTMSKNPVIHQFLKRDEHYQLLLENLSNPTPENSRQLDESFRSFFFELRFTTYISSLIRNAAIDFDKKIRRNQRRLVFFPSNDPSHLHFVHPSLQVQPDLNPDSLQLEDMVTNEVLHEAIQQLTGKEKSVLLASYVWDYSDTEIARLNKVSQQSVSKTRLKALSKLRKYLVESGYGKSEEEKAGD
>NZ_CP019794.1|WP_077996008.1|1627409_1627634_+|hypothetical-protein
MEELLASRTRYRTLKIELLKLSKRIEGADPEDILFYQEICEKYASHLKAIETACYERIGASICNCQFHSEQQCN
>NZ_CP019794.1|WP_077995375.1|1637867_1639091_+|IS256-family-transposase
MAQYQINVDSQLLHQLFLGNSQDAGVAKLLESVLNQVLQAQVSEQVEADRYERTENRKAYRNGSYPHGLHTRVGTITLSVPRIRGGKFTTELFSRYQRSEQALILAMMEMVVNGVSTRKVSQVTEELCGTEFSKSTVSDLCKRLDPIVTAWNNRSLADSLFPFVLVDAMYLKVREDGRVRSRGIMIAIGVNTEGYREVLGLMLGDTESEASWSEFFISLKGRGLRGVDLITSDDHGGLVRAVRQQLQGVTWQRCQTHFTRNVLEASPKALKDEIHGRLRSILDAPDTGTARLLLKQTLAAYEDKAGKAMGVLESGFDDATAVLMLPERYRKRLRTTNSVERLNEEVRRRERVIRIFPNRESVIRLIGALLMEQDEKWAAGKKYLDMTEYMEWRKDRPKSDAKVTRIM
>NZ_CP019794.1|WP_077996014.1|1639246_1640695_-|IS1182-family-transposase
MLRKTGYEGRSQISMVSLDELVPIDHLVRKIEYAIDFSFIYDMVRDVYCEDNGRPSIDPVVLIKIALIQCLFGIRSMRQTIKEIETNVAYRWFIGYDFSQPIPHFSTLGKNYVRRFRDTGLFEGIFHRILEEAARHGFIEPDVLFIDATHVKASANKNKYVKQIVQEQSRKYQDQLDEEINQDRALHGKKPFEKKPNVTQKEVKVSTTDPECGLFVKGEKERVFAYSFHTACDRNGFVLGVKVTPGNIHDSQVFEDVLHEVTRVVPAPQAVAADAGYKTPAICKMLQEQEIRPVLPYTRPKTKEEFFKKHDYVYDEHYDCYLCPANAILSYETTNRAGYKMYRSNPAICQACPFRTQCTESKEAVKRISRHVWAECVEEADHLRHTEENKRIYAERKETIERVFADLKEKHGMRWTTLRGLKRVTMQAMLVFSAMNLKRMATWLWKRGRPSDKFNFVFEIGIKNIKNSRYCSISRDFVFNLK
>NZ_CP019794.1|WP_023483464.1|1640829_1641216_-|DUF1878-family-protein
MEQEIKKVKYHQKLMLTMILHDDPERFAFYHQIINYDLDEQIEKSVLCIISLFNNRLSKNDNLRFEKDYFDSIGLDVIYDVDVTPTIDEYESYLQKLSIPIDPKYLLMAINKQKESDDACQYLLQQYK
>NZ_CP019794.1|WP_077996015.1|1641237_1641696_-|hypothetical-protein
MFKFKKLILASLAVATMLTIAPMPSFAAENTTIEVKQVPMNWGSIDFKKNANNQSVVTMDQDGEVTAQGWKKSVVVWGLRNGGSAFHKITEWLGFGTKEAKYLKDNASKIADALERFESQVEQRLVDFMIFQCGIPQGSARVIAKAITTFIL
>NZ_CP019794.1|WP_155121056.1|1642387_1642537_-|hypothetical-protein
MKIKNWILCITVAITLIGGSSAFSTTTQATASNATIALSDHGVGGDYAS
>NZ_CP019794.1|WP_149867721.1|1642526_1643735_-|DNA-binding-protein
MKQLDTLTEALGLPEGHYYDLYLAECSNNNRVSIPRIKSFLIRCAELGKTDLIMNAIHMSVEHPKYTELLFSVAEELYLNGLVEESLLFYEEVIEEEKFNHSERLAISHYRVFRASIGSDADENFKAVIRFEGFRKNLPENFQLDALFQLARICFSLKKWNLAEQFADELRILVTIRYQEELLVQRSKRTSEPSIREHPLVVYYGQSYLMKSVALTKQGYYEKAKQYLQGYEDLGWFEILDEHGKKEVDKFRLWAQANKYGIELLLGNTSILDEYTNYLTDHPNEIPAGLCNILEAANTYAFNVDYILDKIPITSIGKEATAIEIERHCKIHYQKAIYAFNHHRFVEGLETILYCLPLSISTKKHSQTLLFVGRFQQYIKHASDSQKEQFANIMKEVSVDEN
>NZ_CP019794.1|WP_077996017.1|1643982_1644144_-|transposase
MGIDLGLLHLAVTSDSTMFKAPKQLRRNESHLKQLQRAITRKKRGSKRTSQIA
>NZ_CP019794.1|WP_155121057.1|1644608_1644761_-|hypothetical-protein
MKIKNWILCITVAITLIGGSALSTAIQKVATENPIMALIDHGIGDHKASS
>NZ_CP019794.1|WP_077996018.1|1644750_1645359_-|hypothetical-protein
MYYGQSYLIKSAALFKQGYYEKAKQYIEGYEDLSWFEVLDEQGKKEVEKFRLWAKANKYCIELLLGNVSVLDEYTNYLAEHPNEIPTGLARIMEAANAHGFSIEHILERFPEFSTDNNKVEIVRIEQHFRFHYQKAIYAFNQQHFAEGLETLLYCLSLSISNKEHSETVLCAAQLLQYLNYASDSQKEQFANIMKGVLKGEN
>NZ_CP019794.1|WP_077996019.1|1645401_1646106_-|hypothetical-protein
MDSRISLRDELEKAIAETGCTLSQLQEMGGSHVGNLSASLRGKTLRPITIKQLDKLTEVLGLPEGYYYEYYLAECFYKDKVARPRMGTFLYRCAELGKTELIMKAIDMLAECSRYTELLFSVAENLYMNGLLEESILFYEEVVEEEKYHHSDRLAISHYRIFRITIGTDAEENYKAVIRFEGFRKKLPEDLQLEALLQLAEVCLCLKKWRFTEQFADELRIVATIRYQEELLKK

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Crispr_ID: NZ_CP019794_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_5

2090623-2090760

Orphan

Consensus_repeat	Method
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTACCTTAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019794_5

>merge|NZ_CP019794|5|2090623-2090760|CRISPRCasFinder
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTACCTTAGACTACCATTTTTGCAAAGCAAAATATGGCCCATTCAGATCGGATTTTTCGAAGCGTTACTGCTTCGATCAGGCTGCGAGAAAATATCCTGCCTTAGA

>NZ_CP019794|5|5|2090623-2090760|CRISPRCasFinder
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTACCTTAGA	CTACCATTTTTGCAAAGCAAAATATGGCCCATTCAGATCGGATTTTTCGAAGCG
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTGCCTTAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_077996252.1\|2081552_2084336_-\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|366019
NZ_CP019794.1\|WP_023482142.1\|2105972_2106365_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP019794.1\|WP_036655469.1\|2100596_2101352_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	unknown	unknown	gnl\|CDD\|274337
NZ_CP019794.1\|WP_158672826.1\|2096822_2097434_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|376676
NZ_CP019794.1\|WP_149867732.1\|2098626_2099415_+\|spore-gernimation-protein	unknown	unknown	gnl\|CDD\|380050
NZ_CP019794.1\|WP_024095356.1\|2080072_2080678_-\|zf-HC2-domain-containing-protein	unknown	unknown	gnl\|CDD\|227949
NZ_CP019794.1\|WP_077996258.1\|2102639_2103341_-\|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019794.1\|WP_077996259.1\|2104059_2105325_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP019794.1\|WP_024095360.1\|2096504_2096723_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996260.1\|2106985_2107744_-\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP019794.1\|WP_077996257.1\|2099482_2100544_-\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_CP019794.1\|WP_024095358.1\|2085628_2086249_-\|cytochrome-aa3-quinol-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|131943
NZ_CP019794.1\|WP_077996253.1\|2086259_2088197_-\|cytochrome-aa3-quinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|131928
NZ_CP019794.1\|WP_104932621.1\|2079106_2079976_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019794.1\|WP_023482933.1\|2077359_2078175_-\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
NZ_CP019794.1\|WP_023482935.1\|2080747_2081326_-\|RNA-polymerase-sigma-factor-SigW	unknown	unknown	gnl\|CDD\|182012
NZ_CP019794.1\|WP_077996254.1\|2088215_2089190_-\|cytochrome-aa3-quinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|273621
NZ_CP019794.1\|WP_024095368.1\|2106385_2106823_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP019794.1\|WP_023483469.1\|2085307_2085628_-\|cytochrome-aa3-quinol-oxidase-subunit-IV	unknown	unknown	gnl\|CDD\|200218
NZ_CP019794.1\|WP_036654509.1\|2078402_2079086_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_077996252.1\|2081552_2084336_-\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|366019	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase.	0
NZ_CP019794.1\|WP_023482142.1\|2105972_2106365_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	2.11335e-85
NZ_CP019794.1\|WP_036655469.1\|2100596_2101352_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	3.76868e-101
NZ_CP019794.1\|WP_158672826.1\|2096822_2097434_-\|stage-II-sporulation-protein-M	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	1.34544e-17
NZ_CP019794.1\|WP_149867732.1\|2098626_2099415_+\|spore-gernimation-protein	gnl\|CDD\|380050	pfam17898, GerD, Spore germination GerD central core domain. This is the central core domain found in GerD from a thermophilic Bacillus. GerD plays a critical role in nutrient receptor-mediated spore germination in Bacillus species. The crystal structure of GerD reveals this domain as a trimeric superhelical rope fold. Alterations in GerD structure have profound effects on spores' nutrient germination.	1.22791e-38
NZ_CP019794.1\|WP_024095356.1\|2080072_2080678_-\|zf-HC2-domain-containing-protein	gnl\|CDD\|227949	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription].	1.03984e-16
NZ_CP019794.1\|WP_077996258.1\|2102639_2103341_-\|phosphoadenylyl-sulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.33214e-107
NZ_CP019794.1\|WP_077996259.1\|2104059_2105325_-\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	3.08317e-39
NZ_CP019794.1\|WP_077996260.1\|2106985_2107744_-\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	4.86891e-123
NZ_CP019794.1\|WP_077996257.1\|2099482_2100544_-\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	9.31048e-121
NZ_CP019794.1\|WP_024095358.1\|2085628_2086249_-\|cytochrome-aa3-quinol-oxidase-subunit-III	gnl\|CDD\|131943	TIGR02897, AA3-600_quinol_oxidase_subunit_III, cytochrome aa3 quinol oxidase, subunit III. This family (QoxC) encodes subunit III of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	5.56671e-86
NZ_CP019794.1\|WP_077996253.1\|2086259_2088197_-\|cytochrome-aa3-quinol-oxidase-subunit-I	gnl\|CDD\|131928	TIGR02882, cytochrome_aa3_quinol_oxidase_subunit_I, cytochrome aa3 quinol oxidase, subunit I. This family (QoxB) encodes subunit I of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	0
NZ_CP019794.1\|WP_104932621.1\|2079106_2079976_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.10138e-47
NZ_CP019794.1\|WP_023482933.1\|2077359_2078175_-\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	7.24966e-98
NZ_CP019794.1\|WP_023482935.1\|2080747_2081326_-\|RNA-polymerase-sigma-factor-SigW	gnl\|CDD\|182012	PRK09641, PRK09641, RNA polymerase sigma factor SigW; Provisional.	2.02161e-99
NZ_CP019794.1\|WP_077996254.1\|2088215_2089190_-\|cytochrome-aa3-quinol-oxidase-subunit-II	gnl\|CDD\|273621	TIGR01432, AA3-600_quinol_oxidase_subunit_II, cytochrome aa3 quinol oxidase, subunit II. This enzyme catalyzes the oxidation of quinol with the concomitant reduction of molecular oxygen to water. This acts as the terminal electron acceptor in the respiratory chain. This subunit contains two transmembrane helices and a large external domain responsible for the binding and oxidation of quinol. QuoX is (presently) only found in gram positive bacteria of the Bacillus/Staphylococcus group. Like CyoA, the ubiquinol oxidase found in proteobacteria, the residues responsible for the ligation of Cu(a) and cytochrome c (found in the related cyt. c oxidases) are absent. Unlike CyoA, QoxA is in complex with a subunit I which contains cytochromes a similar to the cyt. c oxidases (as opposed to cytochromes b). [Energy metabolism, Electron transport].	5.53876e-111
NZ_CP019794.1\|WP_024095368.1\|2106385_2106823_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.15286e-99
NZ_CP019794.1\|WP_023483469.1\|2085307_2085628_-\|cytochrome-aa3-quinol-oxidase-subunit-IV	gnl\|CDD\|200218	TIGR02901, cytochrome_aa3_quinol_oxidase_subunit_IV, cytochrome aa3 quinol oxidase, subunit IV. This family (QoxD) encodes subunit IV of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	5.26214e-31
NZ_CP019794.1\|WP_036654509.1\|2078402_2079086_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	7.48767e-10

>NZ_CP019794.1|WP_077996254.1|2088215_2089190_-|cytochrome-aa3-quinol-oxidase-subunit-II
MIKPNKPLFTLGLFLTFFLLSGCDYVVLDPKGPVAEEQKNLILYSIIFMIFIILVVYALFFIIVVKYRERKDKLDYEPPQKEGSKLLETIWTIIPIIIVIALSIPTVKAIYAIEKPKDESQEPLVINATSVDWKWVFSYPEQNIETVNYIKIPAGRPVLFKLTSADSMASFWVPALGGQKYAMAGMENKLYLEAHEPGVFDGRNANFTGEGFAHQTFKVTAQTKEDFEKWVNESKQTAPPLTQDQYDQLMLQGPADVMTFSSTHLQWVDHAREQDYALRVREKLGQLPKGTVDRKKNEDIPLSYMGSYESEKSGHEYQSHSGSH
>NZ_CP019794.1|WP_077996253.1|2086259_2088197_-|cytochrome-aa3-quinol-oxidase-subunit-I
MKWDEFFVTGDPLIYGADASIILASIAIVAGLTYFKKWKWLWREWLTTVDHKKIGIMYIISAVLMLFRGGVDALLMRTQLAVPDAGFLDSTHYNQIFTTHGTIMIIFMAMPFLIGIMNVVLPLQIGARDVAYPYLNAVSFWSFFMGAMLFNISFVIGGSPEAGWTSYMPLASNELSPGPGQNYYLLGLQISGIGTLLTGINFIVTILKMRAPGMKLFKMPMFAWSSLVTSIIIVFAFPILTVALALMTFDRLFGAHFFTLAGAGMDMLWANLFWLWGHPEVYIVILPAFGIFSEIISTFSRKRLFGYHAMVYSMLIIAGLSFLVWVHHFFTMGSGELVNSFFSISTMAIGIPTGVKLFNWLFTMYQGRIRFTTPMLWSLGFIVNFVIGGVTGVMLAMAAADYQYHNTYFLISHFHYVLIAGTVFACFAGLTYWYPKMFGHKLNERIGKWCFWIFMIGFNVCFMPMYFLGLAGMPRRIYTYPAETGWGGMNMVATIGAFLMGIAFLLLVYNIYYSFRYEKREETGDAWDGRTLEWATPKAIPPHYNFAAVPKVESLDAFWHMKMEKKKWIVKDNLQPIHMPSNSGVPFVMGVFFFIAGFGLVFEWFPMAIAGGIGVILTMIIRSFDYDQGFYVPLKEIEHDLSSVK
>NZ_CP019794.1|WP_024095358.1|2085628_2086249_-|cytochrome-aa3-quinol-oxidase-subunit-III
MEIAHGHDKSNSGAPLEYQSETGRLNILGFWIFLGAEIVLFSTLFATFMVLVNRVADGPTPQDLFEIKGVLIQTFLLLTSSFTCGIAVHELRRRNVKGLVLWLVITLALGLGFLGFEIKEFVEYVHEGATIGTSAFWSSFFVLAGTHGAHVTLGIGWMILIIFQLLKRGLTPFTSSKVFIVSLYWHFLDVVWIFIFTVVYLARMVM
>NZ_CP019794.1|WP_023483469.1|2085307_2085628_-|cytochrome-aa3-quinol-oxidase-subunit-IV
MSNSHDTSAEHKGFPWKHVVGYLVSIVLTLLALWVAFKSGFSINVLMTFIYILAFLQAALQLLMFMHMTESSNGKYQTGTMLYAVFIAIVIAAGSVWVMSSGHAAH
>NZ_CP019794.1|WP_077996252.1|2081552_2084336_-|phosphoenolpyruvate-carboxylase
MSDNEMVFQRNVTNNLLRRDISFLGHILGEVLVHQGGNGLLTVVEKIREMSKSLRAQYNPEVFREFKEIIHSLNPEIRHQVVRAFAIYFQLVNIAEQNHRIRRKRDYERTSGVMIQPGSIESIIQHLKQKNVPAEELKEMIGGVTLELVMTAHPTEAVRRTVLNIHQRIAKDVMLLDNPTLTYREREQLREKLQAEVMTLWQTDELRDRKPTVLDEVHNGLYYFDETLFDVIPEVYQELERCLTKYYPSETWHVPTFLKFGSWIGGDRDGNPAVTSRVTWDTLELHHQLALKKYEEILHEIRDHMSFSKNIVNVSEELLASLQADQEALGRRDVWPNEKEPYRIKIGYMIQKIRNTGNDQIARFQKYNKPEELINDLVIIERSLRNHYADFVADAYINKLIRQVELFGFYVAALDIRQHSKEHELALDEILSKMGIQDHYSELDEEMKIDLLTRLLNDPGPITTPYLEYSESTQECLDVFKTVKQAQKEFGETCITSYLISMTQGSSDLLEVLLFAKEVGLYRKEKDGTITSTLQPVPLFETIEDLHAAPEIMKTVYEIPAYRESVEAYGDRQEIMLGYSDSNKDGGVITANYELRLALRSITAASDKYGVKVKFFHGRGGSLGRGGMPLNRSILTQPADTIGGGIKITEQGEVLSSRYSLQGIAYRSLEQATCALITATVISRKPEVLPYEAEWDEIMVGISEAAYNKYQDLIFRDPDFLTFFKETTPLPEVGELNIGSRPSKRKNSDRFEDLRAIPWVFAWTQSRYLLPAWYAAGTGLQSFYQGKEENLQIMRTMYEKWPFFRSMIDGLQMALAKADLLIAQEYARMVKDQEAGQRIFEFIREEFKLTSSLILKITGQKGILDNVPVIQESIRLRNPYVDPLSYLQVDLLTELRALREEGNDDAKLLREVLLTINGIAAGLRNTG
>NZ_CP019794.1|WP_023482935.1|2080747_2081326_-|RNA-polymerase-sigma-factor-SigW
MNVVEVRLAKLARKGDRGAFAELVNLYKDKIYHLAYRMLSNSQEAEDAVQETFLRVYMNLERYDVKQKFSTWIFRIATNLCIDRLRKRKPTYSLDAEMPDSEGNDFYAMLPSKEDTPEDQVILSETQEHIRCAINTLPVKYKTIVVLRYLHDMSLQEISDVLNIPVTTVKTRVHRGREYLRQKLSDEYQKKR
>NZ_CP019794.1|WP_024095356.1|2080072_2080678_-|zf-HC2-domain-containing-protein
MDCKQALPLMHEYLDGDLQGADALALKEHLIACPGCRKLYKQMETTDALVKSIPTAQLPDDLTDRIMTKLPPEKKRNSVVHWLRRHPGLSVAVVFVVVMLGSFLTLWDENKQVMVKGPESGQVIIDGNTVIVPEGVTVNGNLVVQGGELDVEGELDGNLTLIDGTLNLASTAHISGNVQRINESIGWLWYKVNEFFSSFTK
>NZ_CP019794.1|WP_104932621.1|2079106_2079976_+|IS3-family-transposase
MYLAIRGLRETKSYPICQLCDLIGIQRSSYYKWINRKESINEIFNKALLPMIKDAYEEKDGILGYRQMTIKLNRERHVTVNHKRIYRLMGILGLKSVCRRKRKNYIHSTPEITAENILNRDFESSEFGTKWLTDVTEMKYGNQNKAYLSAILDLSDKSIVSFVVGHSNNNELVFKTFDIAHMTYPDATPLFHSDRGFQYTCKIFKKKLDDAGMIQSMSRVSRCIDNGPMESFWGMMKSEMYYLRKFYTYEELEAAVIEYIDYYNTRRYQKRLNCMTPLEYRQYLLSSAA
>NZ_CP019794.1|WP_036654509.1|2078402_2079086_+|helix-turn-helix-domain-containing-protein
MSHKAKVSGSEKIAAVEKYLRGEDSLNHLAALLDVRHSSVRQWLQTYQSLGPNGLLQTSQNASYSAELKRIAVEDYLAGGGSHMDICKRYGIKSTCQLRDWILKYNSHEKLNTSGTGGVPIMTKGRTTTYDERVEIVRFCIEHQHNYAQTADKFQVSYQQVYSWTNKYLTSGVDALQDRRGKRKSEDEMSEVEKLRAQNKLLQAENRRKQMEIDLLKKLDEIERRRF
>NZ_CP019794.1|WP_023482933.1|2077359_2078175_-|TIGR00159-family-protein
MEYFAVFSFNDIVDILIVSYVIYKLIMLIRGTRAIQLMKGIFIVVATWAFSFLFKLNTLQWMMNQMFNIGVIAIIIIFQPELRRALEQLGRGKLFSRSNDLDQDVNKRIAEVIKALNYLSKRKIGALIVFEKETGLTDYIESGIPMESKISSELLINIFIPNTPLHDGAVIIRGHQIMAAGCYLPLSENPFISKELGTRHRAAIGMSEVSDAVCLIVSEETGQISLSLNGQIVRDIKEESLISKLFEQLKPQGRSGDKNPFKKWWEGRRRG
>NZ_CP019794.1|WP_024095360.1|2096504_2096723_-|hypothetical-protein
MLGFLFNDRECKELDYVLRKELDEMLFDLNDKRLDEEIKAAIEARYRTVFRMYARVATPKEISKYARNRVYH
>NZ_CP019794.1|WP_158672826.1|2096822_2097434_-|stage-II-sporulation-protein-M
MKFKPLWRHFREMKHYFIATTLVFVVGIFLGAVYNQQFYDFLAAQTKGMKDLVNKINSQETPQIWFFVVIFLNNSVKALLFIFSGLFFGLLPLFSMISNGLLLGFLISRTPASDVFEMVAKGILPHGIIELPAIIIASAYGLKLGGLVFKGMFSLFRPAALSNVKNELIQVLKLTGPLAVVLVGALFIAAIIESTLTFWLAQG
>NZ_CP019794.1|WP_149867732.1|2098626_2099415_+|spore-gernimation-protein
MNVLTKLRFIPVLLFVILLVSCGPDTSQSSGTNQGNYKDTKTMVMDILKSEEGKKAIKEASKGGGNSGSGSGGGAMSMMSESQLAQLKIAAKDVLTSTDNSKLLQEIMKDPQFAGDFAKAIKNDNKQLQKDLMKDPEYQKQMLEVMKNSDYEKMVLEVMKSVPYRQQVMNLIQESMQSPLFKTQLISLMKKAVEQQEQPMQQKTEGGKEKEGKGGEGKDQGKKKDKEQSSGKEEGKDSSGDSDSESDTDSNKKKKKKDDENQ
>NZ_CP019794.1|WP_077996257.1|2099482_2100544_-|Mrp/NBP35-family-ATP-binding-protein
MTREEVLEALQDLVDPHYGKSIVELGGIKDVVIKGQTVALTCVLSKDEGVNKDKLKQDITEVLTRKEIEQVHIRFRVMTDFERAQLGQQAGTPSAGSKPVSLLSPSSKVQFIAVASGKGGVGKSTVTVNLAASLSRLGKKVGIMDADIYGFSVPDMMGIEEQPRLENDHIIPVERHGVKVISMGFFVQDNAPVIWRGPMLGKMLRNFFNEVNWGDLDYMLLDLPPGTGDVALDVHQLLPGCKEIIVTTPHATAAYVAARAGAMALHTDHEIIGVVENMSYYSCSKCGNKDYIFGRGGGGKLAEELHTKLLAQIPLGAPDNHVAEPDYSPSVFKESTETGQLYLELARKVLEKL
>NZ_CP019794.1|WP_036655469.1|2100596_2101352_-|N-acetylmuramoyl-L-alanine-amidase-CwlD
MPKKRKRLVVWLTFQSGLKIVFSAILVALLVMIYAYKLPATETWTEWTQPLAGKTIALDAGHGGPDGGASSKSGVIEKDINLIISLYVRDYLQQAGAIVVMTREMDKDLANPDTKGYSKRKTEDLLKRAEFVIQKKADLFLSIHLNSVPSPKWRGAQAFYYPNNQDNYRLASLIQEEIKRNMENTDRVAKQEESVYLLKTLKMPSTLIELGFLSNPDEARMLADDKYQKKLAASIYQGILRYYAGEKVSTS
>NZ_CP019794.1|WP_077996258.1|2102639_2103341_-|phosphoadenylyl-sulfate-reductase
MNLPEKEVLLSQISQEYEQKSAEELVVKAVETFPHIIFACSFGAEDVVLVDIMQKVAPSIDIFYLDTHVHFKETYLTKDRLQEKYNIEFIQVEPKISLAEQADRFGEELWKSDPNSCCNIRKVEPLSRILSEYDAWITGIRRDQAPTRANAPKAAYDTKFDLAKFNPLANWTSDDVWDYIREYELIYNPLHDQNYPSIGCEYCTRQVLPGEDLRAGRWSGFGKTECGLHQPQT
>NZ_CP019794.1|WP_077996259.1|2104059_2105325_-|C40-family-peptidase
MATKWLKSLVLSGALVTVGLIASNTTAHAAVPDGVKVQINNHLVNFSDAMPYLNQGSLMVPMRAVAENLGYKLEFEMVQNGTQVRVKLIGDGHVFEFESGKQKAKVDNRSVTLDEVPVIKNDRVYVHIRSIGEHFGHIVQWDMNNNIGILGADGKYHAPAWYKPAKRTTPSKDVTLSAKKSNKSAGKQHTEKSVDKQVKPATSKDVTLSAKKSNESAGKQHTEKPADKQVKSATSKDVTSSVKKSNESAGKQHTEKPADKQVKSATSKDVTSSVKKSNESAGKQHTEKPAHKQVEPATSKDVTSTDKKSIVSKATRQIGVPYLWGGTSPNGFDCSGLVTYIFKQQGINLPRTSSGMYGVGTSVSNPEQGDLVFFADGGKVFHVGIYVGGNQFISATDDGVKIDSLGNRYWNKFYIGAKKVI
>NZ_CP019794.1|WP_023482142.1|2105972_2106365_-|30S-ribosomal-protein-S9
MAQVQYYGTGRRKHSVARVRLVPGEGRIIINKRDLNDYFGHETLKLIVKQPLALTETLNKYDVIVLAHGGGMSGQAGAIRHGISRALLKADPESRGSLKRAGFLTRDPRMKERKKYGLKAARRAPQFSKR
>NZ_CP019794.1|WP_024095368.1|2106385_2106823_-|50S-ribosomal-protein-L13
MRTTYMAKPNEVERKWYIIDATNKTLGRLASEAASIIRGKHKPQFTPHVDTGDFVIIINAEKIHLTGKKLTDKKYYRHSMHPGGLKVTTAQEMLKNKPERMLELAIHGMLPKNRLGNSMKTKLKVYAGSEHPHQAQKPEVWELRG
>NZ_CP019794.1|WP_077996260.1|2106985_2107744_-|tRNA-pseudouridine(38-40)-synthase-TruA
MRNLRFTLSYDGTSYSGFQTQPDGNTVQDQLEEAIHMLTGEKVKITSSGRTDAGVHARGQVVNFLTSSRIPVDRWCLALNSRLPRDIVVYEAEEVSLTFHSRKSAKRKTYCYEIRTSRFPDVFHRAFEVHYPTPLNIEAMKEALSCFIGTHDFTSFCTTRTTMENRVRTIYEARLEYLPDQDDPARGLIRIYLTGSGFLYNMVRIIVGTILQVGEGKEKSSEIPVILAAKDRRKAGPTAMAKGLTLWKVEYE

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Crispr_ID: NZ_CP019794_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_6

2584002-2584137

Orphan

Consensus_repeat	Method
TAAGGCAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019794_6

>merge|NZ_CP019794|6|2584002-2584137|CRISPRCasFinder
TAAGGCAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAACGCTTCGAAAAATCCGATCTGAATGGGCCATATTTTGCTTTGCAAAAATGGTAGTCTAAGGTAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA

>NZ_CP019794|6|6|2584002-2584137|CRISPRCasFinder
TAAGGCAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA	CGCTTCGAAAAATCCGATCTGAATGGGCCATATTTTGCTTTGCAAAAATGGTAGTC
TAAGGTAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_024095463.1\|2585160_2585346_+\|sigma-factor-G-inhibitor-Gin	unknown	unknown	gnl\|CDD\|378490
NZ_CP019794.1\|WP_024095464.1\|2584478_2584994_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_023482256.1\|2590459_2590795_+\|DNA-replication-initiation-control-protein-YabA	unknown	unknown	gnl\|CDD\|377617
NZ_CP019794.1\|WP_158672704.1\|2566896_2567898_+\|DUF4340-domain-containing-protein	unknown	unknown	gnl\|CDD\|379518
NZ_CP019794.1\|WP_077996486.1\|2574189_2576520_+\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_CP019794.1\|WP_042119381.1\|2588651_2589629_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|181214
NZ_CP019794.1\|WP_024095462.1\|2587079_2587745_+\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
NZ_CP019794.1\|WP_023482257.1\|2589631_2590441_+\|stage-0-sporulation-family-protein	unknown	unknown	gnl\|CDD\|224688
NZ_CP019794.1\|WP_042119882.1\|2568150_2568381_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996485.1\|2573342_2574041_+\|heptaprenylglyceryl-phosphate-synthase	unknown	unknown	gnl\|CDD\|235237
NZ_CP019794.1\|WP_188318657.1\|2588192_2588600_+\|YaaR-family-protein	unknown	unknown	gnl\|CDD\|377152
NZ_CP019794.1\|WP_023483112.1\|2572148_2572985_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
NZ_CP019794.1\|WP_077996483.1\|2569631_2570081_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_036657332.1\|2565517_2566900_+\|GldG-family-protein	unknown	unknown	gnl\|CDD\|378253
NZ_CP019794.1\|WP_077996484.1\|2570333_2572088_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366444
NZ_CP019794.1\|WP_024095459.1\|2591650_2592520_+\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|381175
NZ_CP019794.1\|WP_077996482.1\|2568413_2569463_+\|spore-coat-protein	unknown	unknown	gnl\|CDD\|377935
NZ_CP019794.1\|WP_077996487.1\|2576608_2578630_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP019794.1\|WP_023482253.1\|2592644_2592899_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|131898
NZ_CP019794.1\|WP_036655561.1\|2587777_2588107_+\|cyclic-di-AMP-receptor	unknown	unknown	gnl\|CDD\|283747

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_024095463.1\|2585160_2585346_+\|sigma-factor-G-inhibitor-Gin	gnl\|CDD\|378490	pfam10764, Gin, Inhibitor of sigma-G Gin. Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB.	1.01342e-13
NZ_CP019794.1\|WP_023482256.1\|2590459_2590795_+\|DNA-replication-initiation-control-protein-YabA	gnl\|CDD\|377617	pfam06156, YabB, Initiation control protein YabA. YabA is involved in initiation control of chromosome replication. It interacts with both DnaA and DnaN, acting as a bridge between these two proteins.	4.54817e-41
NZ_CP019794.1\|WP_158672704.1\|2566896_2567898_+\|DUF4340-domain-containing-protein	gnl\|CDD\|379518	pfam14238, DUF4340, Domain of unknown function (DUF4340). This domain is found in bacteria, and is typically between 183 and 196 amino acids in length.	6.26138e-23
NZ_CP019794.1\|WP_077996486.1\|2574189_2576520_+\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP019794.1\|WP_042119381.1\|2588651_2589629_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|181214	PRK08058, PRK08058, DNA polymerase III subunit delta'; Validated.	1.43963e-120
NZ_CP019794.1\|WP_024095462.1\|2587079_2587745_+\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	3.9371e-89
NZ_CP019794.1\|WP_023482257.1\|2589631_2590441_+\|stage-0-sporulation-family-protein	gnl\|CDD\|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	1.87233e-104
NZ_CP019794.1\|WP_188318657.1\|2588192_2588600_+\|YaaR-family-protein	gnl\|CDD\|377152	pfam03885, DUF327, Protein of unknown function (DUF327). The proteins in this family are around 140-170 residues in length. The proteins contain many conserved residues. with the most conserved motifs found in the central and C-terminal region. The function of these proteins is unknown.	1.82566e-38
NZ_CP019794.1\|WP_077996485.1\|2573342_2574041_+\|heptaprenylglyceryl-phosphate-synthase	gnl\|CDD\|235237	PRK04169, PRK04169, heptaprenylglyceryl phosphate synthase.	2.98734e-93
NZ_CP019794.1\|WP_023483112.1\|2572148_2572985_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.60875e-100
NZ_CP019794.1\|WP_036657332.1\|2565517_2566900_+\|GldG-family-protein	gnl\|CDD\|378253	pfam09822, ABC_transp_aux, ABC-type uncharacterized transport system. This domain is found in various eukaryotic and prokaryotic intra-flagellar transport proteins involved in gliding motility, as well as in several hypothetical proteins.	5.96674e-29
NZ_CP019794.1\|WP_077996484.1\|2570333_2572088_+\|hypothetical-protein	gnl\|CDD\|366444	pfam01061, ABC2_membrane, ABC-2 type transporter.	0.0017459
NZ_CP019794.1\|WP_024095459.1\|2591650_2592520_+\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|381175	cd11648, RsmI, Ribosomal RNA small subunit methyltransferase I (RsmI), also known as rRNA (cytidine-2'-O-)-methyltransferase. RsmI is an S-AdoMet (S-adenosyl-L-methionine or SAM)-dependent methyltransferase responsible for the 2'-O-methylation of cytidine 1402 (C1402) at the P site of bacterial 16S rRNA. Another S-AdoMet-dependent methyltransferase, RsmH (not included in this family), is responsible for N4-methylation at C1402. These methylation reactions may occur at a late step during 30S assembly in the cell. The dimethyl modification is believed to be conserved in bacteria, may play a role in fine-tuning the shape and functions of the P-site to increase the translation fidelity, and has been shown for Staphylococcus aureus, to contribute to virulence in host animals by conferring resistance to oxidative stress.	3.03805e-121
NZ_CP019794.1\|WP_077996482.1\|2568413_2569463_+\|spore-coat-protein	gnl\|CDD\|377935	pfam07875, Coat_F, Coat F domain. The Coat F proteins, which contribute to the Bacillales spore coat. It occurs multiple times in the genomes it is found in.	3.27042e-12
NZ_CP019794.1\|WP_077996487.1\|2576608_2578630_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP019794.1\|WP_023482253.1\|2592644_2592899_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|131898	TIGR02851, stage_V_sporulation_protein_T, stage V sporulation protein T. Members of this protein family are the stage V sporulation protein T (SpoVT), a protein of the sporulation/germination program in Bacillus subtilis and related species. The amino-terminal 50 amino acids are nearly perfectly conserved across all endospore-forming bacteria. SpoVT is a DNA-binding transcriptional regulator related to AbrB (See pfam04014). [Regulatory functions, DNA interactions, Cellular processes, Sporulation and germination].	7.38522e-17
NZ_CP019794.1\|WP_036655561.1\|2587777_2588107_+\|cyclic-di-AMP-receptor	gnl\|CDD\|283747	pfam06153, CdAMP_rec, Cyclic-di-AMP receptor. CdAMP is a family of bacterial cyclic-di-AMP receptor proteins. Cyclic-di-AMP (c-di-AMP) is a bacterial secondary messenger involved in various processes, including sensing of DNA-integrity, cell wall metabolism and potassium transport. CdAMP_rec has a ferredoxin-like fold and is structurally related to Pii-signal transduction proteins.	2.47675e-65

>NZ_CP019794.1|WP_077996487.1|2576608_2578630_+|NAD-dependent-DNA-ligase-LigA
MTDVISAMKILIEEINKHNYHYYTLDEPTITDQEYDALYDRLLKLEKESGTVLPNSPTLRVGGDILKGFEPHRHRSRLWSLDKAQSIEVLKNWHNRVQKLVNDYNSKNPSTPLPEPSFAVELKFDGLTINLTYDQGNLVQASTRGNGVVGEGILAQVKTIKSVPLEIPYKEGLIEVQGEGMMLLSVLDQYNQTAAEPLKNARNAAAGALRNLNPKVTAERRLTAFFYNVGFSDRKQFMNHQEMIAFLKENHFKVNPYVKYFNTIDEVFEEMKKLEQERHDFDFLIDGAVIKVTDIRTREVLGYTEKFPRWAIAYKFEAEEVTTVLEGVSWEVGRTGKITPVAKVEPVELAGVTVQNCTLNNIGDIERKNLKHALGSLVYIRRSNDVIPEILGKVTEEIDGEEIKYPEHCPACGTELEQRGAHLFCPNRLGCKPQLIGRITHFASRDAMDIETFSVMTAEQLYQQLDVRDPADLYDLTYDDIIQLPRFGEKKANNLLDAIEKSKERDLSSFLFALGIPNTGKTTTKVLAEHFRSLDKVMDAAVEELIALPDVGGIVADSIYTFFRDPIMIESIRRMKKAGVQAQMEAEEGKAEIDPGHPFYGKTIVLTGTLSSMSRDEAAKKLESLGAKVTGSVSKKTDIVIAGENAGSKLAKAEQLGIRVIDNEDELLHLLDT
>NZ_CP019794.1|WP_077996486.1|2574189_2576520_+|DNA-helicase-PcrA
MNETKNILDAIQRLNPQQCKAVETTQGPLLIMAGAGSGKTRVLTHRIAYLIASRKAAPWSILAITFTNKAAREMQDRVGKLVGPAAEDIWVSTFHSMCVRILRKDISRLGFTSNFSILDSSDQLSVIKTCMKELNIDTKKFEPKAIQAAIGTAKNELITPARYDERIGDYFEGIVSKVYALYQKKLKQNNSLDFDDLIMTTIELFKEVPEVLDFYQNKFQYIHVDEYQDTNRAQYMLCQMIADKHKNICVVGDSDQSIYRWRGADITNILNFEEDYPDAVTIMLEQNYRSTSNILNAANQVISNNSGRKPKNLWTDKGEGSKIKLYNADSEHEEGYFIAGEINKNISNGKQYSDHAILYRTNAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDILAYLRLISNPDDDLSLRRIVNVPKRGIGDTTMDKVADAAAKRGMSLYALLSEVDSLEISTRAKNALRDFYDMISNLNRMVEYVSVTDLTEKMLEMTEYRIELQRENTLESKARLENIDEFISVTMDFEKRNDNKSLVSFLTDLALIADIDTMDKEDAPQDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFTDDEELEEERRLAYVGITRAEQELFLTCARMRTLFGRTTANAPSRFLQELPEEVTERISSGERFGRSAGTGWGRPAAGGQGFGARDASFGSSSSVSSGWGQSSLKGRNGAPSSGPGKAAVRIKQPLGTNNPGDFNMGDKVSHGKWGTGVIVAVKGKGDDTELQIAFSAPVGVKRLLAKFAPIKKEN
>NZ_CP019794.1|WP_077996485.1|2573342_2574041_+|heptaprenylglyceryl-phosphate-synthase
MIVDITHWKHAFKLDPDKTISDEALEQICLSGTDVILVGGSSGVTFENTVELLSRIRMYEVPCVLEVSHLEAIVPGFDLYLIPSVLNAGDPEWILGQHHKAVKEYGAVMDWKEVLVEGYVILNGESTAAKVSEADTDLTIRDVVAYARMAEHMFNLPILYLEYSGTFGDMKLVSTAKSVLSRTRVFYGGGIDGPDKASIAASAADTVVVGNLIYTDLHKALATVTSVASIDS
>NZ_CP019794.1|WP_023483112.1|2572148_2572985_+|ABC-transporter-ATP-binding-protein
MLILKQVTKKYGKKLALHPVNVQLDKGVIGLLGPNGAGKTTLLRILATYHSATTGTISLNQVAWAADIEKIRTMIGYLPQHIGIFPNLTVHEYLEYMGTLRNMDNQTLKQKIPSILEDVRLQDQARKKVKQLSGGMKQRLGIGQAILHEPELLLVDEPTAGLDPEERIRFRHLIKRLSTNRIVILSTHITEDVAVTCDQVLLMNKGKLEKYESVQQVTDNALHKVWLVEANFSEYERLRNNQDMFITNVTEHKGRYQLMGTFTGGSGQSSLYYAVVHT
>NZ_CP019794.1|WP_077996484.1|2570333_2572088_+|hypothetical-protein
MLRLMKFQALEFMRKPVWFVLFLGAIGVAVFLPSENLTDLYIIPSLIYMIMMMTLLFFLFGAEEARAEQMNNQIEFYRTTPKLISLLVSKFLYWLILATVVYFILYLTVVGYIQFTHHNVTIKLIGESFTYTVFCWLLPFYFSLLLGYLFYSIYPSLFSYLGIIVLWFLTTPYNSMLRFIPSWIGGWLINGDTNIQLTATNIYPLEKMLPNTGVYIQRLFMCLLLLSLFGLIKAYQKVQLKRVCGGLVIAACTLPIFSPYVPYITDPERTGLQDSVFTLPQGNLSNKLDYKISDYHIDFVHGQNNHDFNYTVDISLTSQKPEIVLALWQSFRISQTSFNGAPIPSIKKDENLVYVDLPGKTLEGTLRMDIATDSYDKITPNTFELISTSPWYPMHPKEALNPYHNGVKETYTITTPKASENIISNLPKQSDGRWEGEAYGPTLLRGPFMEQADLIHPEFTPLQDEKELKQSILDAVDQNNKRWNGAVTGPQKIYFLTISSEFSANPDEWFTIYRKGIMPSSMILTPLFLRPEQNFKELNLFQSFYFGDIENKDARPMYEQEYGVPFMDLIYNKYAPLTRKAETY
>NZ_CP019794.1|WP_077996483.1|2569631_2570081_+|hypothetical-protein
MMKNRWFAMANTLLLTVGIAAGCTGIYHPDAMGNHVLAGGNPITQPVYAAVPELEAQLIKEGNKATISYTVKNFKLSAEHFGKKHVSGEGHLHLVVDGEPKVMMKEQSRIILENIPPGKHTIKLTLQQNDHKPLHVEKEFHIEVKGGGG
>NZ_CP019794.1|WP_077996482.1|2568413_2569463_+|spore-coat-protein
MIQSKTAQNEASSFRMEEQDQANVILSELKRTAREYTTAALEANHPQVREQFTTLLNQTLKHQAELYEAIRSLNAYGSVPTATAQEIQSESQKQTKSAAKLRALVHQFTSASSASVSGGSSAQGASNFVHAGSVTVDEADRQDSLTNTEGPLAQGQSFAQAQGSASQKEKSLSSAPTGTEVPAFSASRVLEAEANRLTGQPDADMALSHQGHGEHKKPQPGAVLTQQLYPNAVYQPHSSQGAPATSGQAPPYQSQSPYIGSGQGYPASDITQRGITRPGQPAGSAFQGPSYPGTGHASPVYIPYGGIGGGSGGMHAPAGYQPQAGPGTGRPGGMQPLPPHGSPGGRFMP
>NZ_CP019794.1|WP_042119882.1|2568150_2568381_+|hypothetical-protein
MNPSSKSGLTAKELSYITDSMKNEELLTKLYVQGAVESTKPELKQVMDRHARERLKQVEQLNGLFSTFGAQSPSNQ
>NZ_CP019794.1|WP_158672704.1|2566896_2567898_+|DUF4340-domain-containing-protein
MRKFIPTLLALAVFIGLFWYASGHSFFKKEDETAEKTSPVFSMKKEDVQGIYVKTDKGETELSLKDGNWTMQKPQEQPINSNLVGSWLDTYVSLNREDIVEDQASDLAKYGLDKPAAEYRVTLKDGTSKVLQTGENLPTGDSVYAKLAGSDQVFPVTGQSLEQLSKAPIDFVDCSPAKFDSDKVTKLDFSWNNQTWTLIKQEPDKSMAEAKWTLNNEEIPGTMVSSRLDKLSSLSTEKLVEPASNHTDIKGELRIEVTEVKDGQETKSVYLGQSSKDLVWMMKEGGPWAYAIPVSGVQDLASQGKLTDKEKKQIEEEKTATSPSPSPSATPTP
>NZ_CP019794.1|WP_036657332.1|2565517_2566900_+|GldG-family-protein
MNKWIRGTNATVLSLAVIGIFVILTFFLNSLSGFQLDLTKNKNFTLSDQTVNMLKSLDKDIHITAFTLPEDQEYFTRQVSDLVQEYKKRSGKITFDQYDLRKEPSKAQQYNLRGSSLVIEAGDKNVTLGYTDMFNFNQQPYSFSGEEKITQAINSLISGEKHTAYFLSGHQEIPLTKMNDFKSSLEGDNYTVKELNLLKEGKVPDDAEILFIIGAQNDLSDKEAELVKSYMDGNGKLYLALGFNKDMVTAWKNLDGIMNQYSIQDQHAIAVENSSNRTVQDPLTIFPDYGAHDITNKLSEYNMLTMMSLGISLDAKESDTWKASPLLQTSNDAYGETDIESLMKPQLPKKDDKDVAGPLKLGYAVENKDGKPKAVIMGGSTYLVDQDFRQQGNKDFALNSVNWLQEKKDQVTIRPREGDNTQTAQLSGGQAKTIFWTTVVCFPLFFLALGGLIWWRRRKG
>NZ_CP019794.1|WP_024095464.1|2584478_2584994_-|hypothetical-protein
MQHPLSQEATIYEYTLLRKFKMNPLFGSLYALTALVWCLKTVSFIDAGLSVLSAGVIFLLHALLLMALVKIGPYRPDTGWTWQYQLLWVGYLPTKYVKYTTMMKLHLHVFAIGGLVILAFFVWLPVLVRGDLFFFHLWILLPRFFFLMRCKQLKDVSWVLITRWTLSCYRQ
>NZ_CP019794.1|WP_024095463.1|2585160_2585346_+|sigma-factor-G-inhibitor-Gin
MEKPVVCTCTCIICGREETDGITVLDGFICEACEAEMVRTDVCDTKYPFFVHQMKKYLLKK
>NZ_CP019794.1|WP_024095462.1|2587079_2587745_+|dTMP-kinase
MKGVFVTFEGPDGSGKTTQIRLLADALNKQGFQVLQTREPGGTPISDQIRSLILSPEHQEMKDQTEVLLYAASRAQHVHEVILPALKQGKIVLCDRFIDASLAYQAYGLGIEFESVIEVNRFASSGLLPNRTYLLDVPVEISQSRLTRREEGLDRIEQKGRDYHQRVREGFHQIYKENPERICLIEAEGNVEDIALRIQTDFFSWLKGKIGKMLLDGSHFS
>NZ_CP019794.1|WP_036655561.1|2587777_2588107_+|cyclic-di-AMP-receptor
MKLVIAVVQDKDSNRLSNALIKEGFRATKLASTGGFLRAGNTTFMIGIEDERVNEVFEVIKANCKVRDQLVTPVSPMGGTADSYIPFPVEVQVGGAAVFVLPVENFEHF
>NZ_CP019794.1|WP_188318657.1|2588192_2588600_+|YaaR-family-protein
MKVSENPVPSHTSLKNFSEMMIRHDNKVTQEQLVRLFEQIGLQGDRLSRNMTLRELRQYKLLVKKFLEETARRGVHLKDTRGWDRRGRSKRYKLLEEVDAELLQMADELLETEQGRINLLHQIGEIRGMLIHFLY
>NZ_CP019794.1|WP_042119381.1|2588651_2589629_+|DNA-polymerase-III-subunit-delta'
MSFQSIRGQATAKRMLQNSLREDKISHAYIFSGPVGTGRKQMAIEFAKAIYCLNGDGDSCGECRECRKVEHGNHPDLYMIEPDGASIKIDQIRELQKEFSYKSASSSTKIYIVSEAETMTTQAANSLLKFLEEPVSQVVAILITENGHALLPTIQSRAQWISFTPMPRAEMTRILIEEGFPEILVRSAVQMTAGVQAAKELIEANWFAEMRNLVIQLLKETLTRFPLSFITVQQKLIKTNLNEHMPVLFDFIILWLKDMVRLRLGRNEPFVYMDQLDWMSSLAFSRDVTDWVQMMEQAVELQKRLRSNANPQLVMEKMLVGIQGV
>NZ_CP019794.1|WP_023482257.1|2589631_2590441_+|stage-0-sporulation-family-protein
MYSVVGVRFKKAGKIYYFDPLELPIEKEHAVIVETARGIEYGKVVIGKKTVQEQDVVLPLKKVIRIADQADSVLVEENKKAAKDAFSICLDKIRQHQLKMKLVDVEYTFDRNKIIFYFTAEGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMLGGIGPCGRILCCSSFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYEHDNYESAKDTLPTVGKMVITSYGNGKVLALNMNAKTAKVQLFELGKIMDLPFDDVVEQEVT
>NZ_CP019794.1|WP_023482256.1|2590459_2590795_+|DNA-replication-initiation-control-protein-YabA
MDKQDIFVEVGQIEEQMGKAYEELGALKKKIIALLEENKHLMLENQQLRAVLQEKENEYIQRTSKEDVPSIGEGHDNLARLYNEGFHICNVYYGHLRTEGDCLFCLSFLNK
>NZ_CP019794.1|WP_024095459.1|2591650_2592520_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MKIQKSYQNTESGGVLYLVGTPIGNLEDITYRAVRILQEAEIIAAEDTRQTRKLLTHLGISGRLVSYHEHNKRASGPELIRLMKEGTTIALVSDAGLPAISDPGTDLAQMAMEEGIPVIPIPGPNAALSALIASGMPTDAFTFLGFMPRDRKRLEEHLKRWKHVSSTFLLYESPHRIIKTLEGIEEHWGNRQICLARELTKRHEEFVRGSVRECLAHLEEYPPIGEYCLIVEGTGEADAEEEIWWKKLSLEEHVAHYLALHGNKKEAIKQTAADRKLPKREVYNHLLDS
>NZ_CP019794.1|WP_023482253.1|2592644_2592899_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MMKSTGIVRKVDELGRVVIPIELRRTLGIGEKDALEIYVDGERIMLKKYEPACIFCGNAENVTYFKGKIVCQNCLSEMPIPVTK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019794_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_7

3365046-3365140

Orphan

Consensus_repeat	Method
TCTGCTAAGAAGTCAAACGAATCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019794_7

>merge|NZ_CP019794|7|3365046-3365140|CRISPRCasFinder
TCTGCTAAGAAGTCAAACGAATCTGCAGGAAAACAGCATACCGGGAAACCTGCTGATAAACAAGTCTCATCTGCTAAGAAGGCAAACGAATCTGC

>NZ_CP019794|7|7|3365046-3365140|CRISPRCasFinder
TCTGCTAAGAAGTCAAACGAATCTGC	AGGAAAACAGCATACCGGGAAACCTGCTGATAAACAAGTCTCA
TCTGCTAAGAAGGCAAACGAATCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_023485471.1\|3356039_3356345_-\|YtpI-family-protein	unknown	unknown	gnl\|CDD\|379413
NZ_CP019794.1\|WP_024095135.1\|3372461_3373328_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	unknown	unknown	gnl\|CDD\|235547
NZ_CP019794.1\|WP_077996949.1\|3374284_3376039_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235784
NZ_CP019794.1\|WP_077996950.1\|3378304_3379603_+\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|180792
NZ_CP019794.1\|WP_024095151.1\|3353915_3354158_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996948.1\|3373317_3374292_+\|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
NZ_CP019794.1\|WP_023483429.1\|3366107_3366686_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996940.1\|3354718_3356056_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226594
NZ_CP019794.1\|WP_155121044.1\|3362705_3362882_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996947.1\|3368166_3371823_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235868
NZ_CP019794.1\|WP_077996942.1\|3360143_3361118_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_CP019794.1\|WP_077996941.1\|3357174_3359496_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP019794.1\|WP_024095136.1\|3372175_3372367_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996946.1\|3365362_3365659_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP019794.1\|WP_155121045.1\|3356521_3356674_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_023485469.1\|3359492_3360122_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP019794.1\|WP_023483422.1\|3376219_3376666_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_CP019794.1\|WP_024095141.1\|3361816_3362359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077996951.1\|3380873_3382025_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213023
NZ_CP019794.1\|WP_036655248.1\|3354285_3354564_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_023485471.1\|3356039_3356345_-\|YtpI-family-protein	gnl\|CDD\|379413	pfam14007, YtpI, YtpI-like protein. The YtpI-like protein family includes the B. subtilis YtpI protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 73 and 101 amino acids in length.	2.5182e-21
NZ_CP019794.1\|WP_024095135.1\|3372461_3373328_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	gnl\|CDD\|235547	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta.	7.58132e-161
NZ_CP019794.1\|WP_077996950.1\|3378304_3379603_+\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|180792	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed.	0
NZ_CP019794.1\|WP_077996948.1\|3373317_3374292_+\|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
NZ_CP019794.1\|WP_077996951.1\|3380873_3382025_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213023	cd10918, CE4_NodB_like_5s_6s, Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes bacterial poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, hemin storage system HmsF protein in gram-negative species, intercellular adhesion proteins IcaB, and many uncharacterized prokaryotic polysaccharide deacetylases. It also includes a putative polysaccharide deacetylase YxkH encoded by the Bacillus subtilis yxkH gene, which is one of six polysaccharide deacetylase gene homologs present in the Bacillus subtilis genome. Sequence comparison shows all family members contain a conserved domain similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, which consists of a deformed (beta/alpha)8 barrel fold with 6 or 7 strands. However, in this family, most proteins have 5 strands and some have 6 strands. Moreover, long insertions are found in many family members, whose function remains unknown.	7.23844e-44
NZ_CP019794.1\|WP_023483422.1\|3376219_3376666_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	1.22363e-42
NZ_CP019794.1\|WP_077996949.1\|3374284_3376039_+\|pyruvate-kinase	gnl\|CDD\|235784	PRK06354, PRK06354, pyruvate kinase; Provisional.	0
NZ_CP019794.1\|WP_077996947.1\|3368166_3371823_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235868	PRK06826, dnaE, DNA polymerase III DnaE; Reviewed.	0
NZ_CP019794.1\|WP_077996942.1\|3360143_3361118_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	1.23465e-21
NZ_CP019794.1\|WP_077996941.1\|3357174_3359496_+\|hypothetical-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	5.35658e-30
NZ_CP019794.1\|WP_077996946.1\|3365362_3365659_+\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	8.60987e-32
NZ_CP019794.1\|WP_023485469.1\|3359492_3360122_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.77369e-44
NZ_CP019794.1\|WP_077996940.1\|3354718_3356056_+\|CBS-domain-containing-protein	gnl\|CDD\|226594	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription].	0

>NZ_CP019794.1|WP_155121044.1|3362705_3362882_+|hypothetical-protein
MDNRIPFRGELEKAIDETGCTLSQLEEKGGTQIGNLSACLSRQIAPTYHIYSRILVYG
>NZ_CP019794.1|WP_024095141.1|3361816_3362359_-|hypothetical-protein
MKLSKIKYFLVFASLVMFFSSVGAPIAGATNMDYDQRLKETEEILEFIGEHAVLTDEYDNIIGLDFDKIRERYGQDKGLDLLEKEVKEKTENNRSAWLDCMKSALLDYFGVNIFESLIGGGVLTYIKAKAWKEAAKLIIRYVPGVSVISLVATLVYYSGKCAIWGMKEENGIEGKQHVYT
>NZ_CP019794.1|WP_077996942.1|3360143_3361118_+|polyprenyl-synthetase-family-protein
MNPQVWKEINEITDRYFTEPDLNGLLKKSIADKAEETSIWSEMTLYIHRMFGGNNPCLYRLGALTELLILGLDIMDDLQDKDNTGKVWMAMPEAAAMNVMNGMLMAALAELGEMKKEYAGQPFPCASEVSRMITTAINGQHIDIMGKVQTEEEYVAMVQQKSCTLFRLSFYLGYSSAGPNLVSDLEAEQLQQFAVYAGMLGQLQNDIQDLTRYDIKNDLLYKKRTLPILYLLAEDESDFPPIHQFYRSEITWEEFLTYKLECLEYIDECGCVEYVSAIRHLYATHANQLLDEIRVRNEWKERLRDVLLGAYNNEVMEEAEIKEG
>NZ_CP019794.1|WP_023485469.1|3359492_3360122_+|response-regulator-transcription-factor
MNREWTVLIVDDHPAMAFGTKMILEARENIRVIGIASSGEEGLSLVKSERPDIVFLDFHLPDMTGLEVASGMMKTHEELKIVIFTGIDFMPILNNLLSLGISGIMSKDSSEEQITNMVNCLIEGQTAISLELFRQLQLGKGEDDGTALTDEEINIMNQIIKGATNEQIAEVIHMSKRSVDNYVRKIYDKFGVKSRAQAIEKFIQMKRPV
>NZ_CP019794.1|WP_077996941.1|3357174_3359496_+|hypothetical-protein
MKLMKYIRWLIPVFLVVQIWTVYITFTYPYLGIVVFQNEQGQWQVNEFQKKSEGSNLVHKGDIVLSIDGQEPGDYFTVKKWKGIEQAGNIVVERDGGRIYSVDTRNLPHPVAPGFIYLLAELLSIGFALLLMKKAGKSKSARLLALVFINIALLYMNVGASERGDTLAKVLISNFMPILPFVFLKFLIEFFREKTGVHCKDGYLRFLYPTLTVIFVLRFSLFLPNADYGTYQANFIAIAVFLLIGLILNFWLLISIYYRYAETHAYLAMILRTVMFSLFISFFPVVGLTFLPQVLFQQEIGYSFYNSWFVHFFPMSFAYLILSKQIYDIEIILRRLLYTTIISIIPSVVLTAVITGLLYKDTHLEKILLTFITILLVMSVLIYSLEYLATKLEKIMFPRKYYLQTALKKVAKDLEVITSFRELKEIVLVDIVNTLQVHGAAFVIQYPNDIEVIGEGMIDPTEVENQFNNRSWNEMGYTVAEINKHEEYNSYLVLTRKKTNTYMNREELQWLNLIITYLSVSMENLYLIRKLHMRLHELASELPNQENGGDYVWFRKTMFELQEKERTRIASDLHDTTMQDIFFVIRKLKSLQKQLTQTEDLRQIRDILNHLELINVNLRQCCFELNPYMLKNIGLIGALRNLIDIESGLGSYEIQLITSGNLEEIEQMEDEKKRHIFRMIQELITNGRKHARADHLNIKLQAEKGQLLVMYEDDGIGFQTESVATKVLGKSGMGLEQMKSRALHLNGLMDISSEKGSGVRISIKIPVKEGVRA
>NZ_CP019794.1|WP_155121045.1|3356521_3356674_-|hypothetical-protein
MKQVHFDQLFDDVWNETLDECIHAIEIPTRTIHYSLEAVLEHLEAGEQTL
>NZ_CP019794.1|WP_023485471.1|3356039_3356345_-|YtpI-family-protein
METVQMFLFIAIVVMLVISVWFSLKYRREKDPVTRGLNAARMNIAMGIMLIIISITQLFFFTDSITRRIFGTVCLLLGLFNLFAGIRNNGHYSRLMSKNDR
>NZ_CP019794.1|WP_077996940.1|3354718_3356056_+|CBS-domain-containing-protein
MDQVNTQSMTKHEQILRYIESLKLGTKISVRKIADQLEVSEGTAYRAIKEAENLGLVSTKERVGTVRVGKKLRQNIDKLTFGEVVNIVDGEVLGGKNGLQKTLNKFVIGAMELDAMVRYIEPGSLLIVGNRTGAHGLALKQGAGVLITGGFTTTDVIKELADEMGLPIISSSYDSFTVASMINRAIYDRLIKKKIMLVEDIISSHTPVYSLKATSTPDDWKNLLEQTGHSRFPVVDEWNRVIGVVTSKDMVGADPDQTVDKLMTRNPLTVYPSTSIASAAHTMVWEAIELLPVVDSNRKMLAVISRNDVLKAMQYIQKQPQHGETFEDLICTGFEESRDESGGLLYKGVITPQMTNHLGTVSEGVLHTLITQAAFRAVQDVKRGDLVMDNISIYSIKPVQIESEIIIKPQLLEVSRKFVKIDVSIHHQQMLVCKAMLTAQVIDRS
>NZ_CP019794.1|WP_036655248.1|3354285_3354564_+|hypothetical-protein
MKGLKNVIYMSLAVGMLIYALPKLNLGEGFTLPTLFGVVWVCFALFVVAAHLHELLGVDEERRQQMNRVQRMKKWQTEQTLQGRRKILQLRK
>NZ_CP019794.1|WP_024095151.1|3353915_3354158_+|hypothetical-protein
MKTLHSSFRISRSEAKPTYRSSKQRLRSLEEEWLELQKFEERRTKKSLQFMPETLKWFGIFGLSAMVIIAMMSIFVDMLR
>NZ_CP019794.1|WP_077996946.1|3365362_3365659_+|C40-family-peptidase
MGGSSPSGFDCSGLVTYIFKQQGINLPRTSSGMYGVGTSVSNPEQGDLVFFANGGKVFHVGVYVGGNRFISATDDGVKIDSLGNSYWNKYYIGAKKVM
>NZ_CP019794.1|WP_023483429.1|3366107_3366686_-|hypothetical-protein
MKIPSFYRASRLLPGIGLFLSGVIIGSSIFMGVYHQNFNFLVVELRKLKSDNERLSLDLESLTKFKDKQTVIQRVTVHLKDSQTPPLNEDIRKELEKKVQNDMKVVVGQKVNSVNDSLELYEKLISDRTYYGVFEKDYVVRVKAIMLVKNELVFWIAALERKPGAAGAPSDTEENKGKSQWFSPKKDDPFTM
>NZ_CP019794.1|WP_077996947.1|3368166_3371823_+|DNA-polymerase-III-subunit-alpha
MSSFVHLHVHSEYSLLDGAARIHDLTERAAELGMSALALTDHGVMYGAIAFYKACKQRGIKPIIGCEVYFTTGSIRQKGNRQEQPIYHLILLAKNNTGYRNLMKLCSIGHLEGFHYKPRIDAEHLAAHSEGLICLSACLGSEVSQHLLHDRKEDARKAAERYRSIFGEDFYLEIQDHGMMEQKKVMHSMIELSRETGIPLIATNDVHYVREPDHEVQDVLICIGTGKTVEDEDRLKMGTSQLYLKTREAMAALFAHVPEAVLNTEKVAAQCQVEIELGHSILPSFEPIPESLTAAEYLKQLCLEGISGRYGTRQEWNDPSSDFRKQVEQKLYYELDVIESMGFSDYFLIVWDFIRYAHEQGIMTGPGRGSSAGSLVAYALNITDVDPIEYNLLFERFLNPERITMPDIDIDFNDERRDEVIDYVVRKYGKERVAQIITFGTMAAKAAVRDVGRVLNLPYNEVDKAAKLIPNHLGMTIDHALEVNSDLRELAEKQPKTAELLNMAKRVEGMPRHASTHAAGVVISRDPLTDYVPLQEGTEQTTLTQYSMEHLESIGLLKIDFLGLRTLSIIERTLAWIKEQEGKLVDWTQTDKSDPKTYELLSRGETTGVFQLESPGMRRVLKELKPSRFEDIISVLALYRPGPMEFIPQYIACKHKQTEPVYPHPSLETILKDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDEQRSHFVEGSLGQGFTAEEANHVYDMIVRFADYGYPRAHATAYGVLAFQTAYLKAHYPRHFMASMLTAVTGNQRKMAEYVDECRRMKLDVLPPDINESGVLFTPVASPGFGTEPARYAGEPAEEGMADKIPVNGAIRFGLAAIKNVGASAIEAVLKERRKETFTSLLDFCRRVDLRICNKRVIESLIQAGAFDTLPGHRAQLVAMLDDTAEAALKWRKEKDDLQLHLFGFVEEPHWEVEVPDVPMLTKLQQLDYERELIGMYLSGHPLDAHEDLLGRLEADPLYQLQEYPDHSEVVVAGMVASSKTIVTKRGEPMAFMELEDRIAKVEIVLFPKVWKGAAPLVQKGRVVFVKAKLQHQDEDMPKLLADVVCGPDDPAIYQLFYKNGDIRKNGAVHNGQVSFGKSGSHSRQKVLTVDNAGEAGIGKTGKNQRVYIKISPDHEEQGKLVPLKQLLQKHSGHLQVALFYERNQKAVALSDAYRVKPSPELFQAVETLLGASSIRVK
>NZ_CP019794.1|WP_024095136.1|3372175_3372367_+|hypothetical-protein
MWTVIYIAPTANIAERIKDRLTEEGFLVQVRGVSMSKNQFEILVPEGEVEEVQEVLNSILHNK
>NZ_CP019794.1|WP_024095135.1|3372461_3373328_+|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta
MLKDLFQKRKYATIPSEKTKRDIPEGLMNKCPRCGTIQYSKELEKNLKVCLACGYHYKLNAMERVRMTLDDERLFEYDDQMISEDPLGFPDYKDKLAKASSRSGLKDAIVTGEGTIGGFPVVIGAMSFDFMGGSLGSVVGEKITRAVEKAIQKQYPVILFSTSGGARMQESILSLMQMAKTSAAISKLNESGGLFVSVITDPTFGGVTASFAMLGDIILAEPASSFGFTGRRVIEQTIREKLPNNFQTAEFNLQHGQLDKVVHRKEMRATLTAILDMHMMKGDANYGG
>NZ_CP019794.1|WP_077996948.1|3373317_3374292_+|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha
MAGELSFEQPLVELRAKIEELKKFGEEKQIDFSEEIKRLEERYEQLENELYANMSTPQRMQLARHPGRPTAMDYIQSIFTDFIELHGDRLYGDDLAIVGGIAKLEGRPVTVIGHQKGKDTKDNIARNFGMPHPEGYRKALRLMQQADKFKRPIITFIDTKGAYPGIASEERGQGEAIARNLLEMASMRVPIICIVIGEGGSGGALALGVGNRVLMLENSIYSVISPEGAASILYNDASKSLHAAEAMKITAKDIEKLGVIDGTIPEPKGGAHRDWEKQADYIKAALLEHLQPLLTMSEQELKEDRYRKFREIGRFTFTQEGNHA
>NZ_CP019794.1|WP_077996949.1|3374284_3376039_+|pyruvate-kinase
MRKTKIVCTIGPASESLEILKKLMNAGMNVARLNFSHGDYEEHGKRIQTIRQASQETGKNVAILLDTKGPEIRTGNLKEEPIELVQGNKITLTTEEILGDANRISVTYQNLPKDVQVGSTILIDDGLIGLRVDSINETDIECTIVNGGPIKSKKGVNVPGVKIALPGITEKDANDIRFGIEQDVDFIAASFVRKASDVLEIRELLEQHNATHIQIIPKIENQEGVENLDEIIEVSDGLMVARGDLGVEIPAEEVPIAQKEMIKKCNLAGKPVITATMMLDSMQRNPRPTRAESSDVANAVFDGSDAVMLSGETAAGKYPVEAVQTMARIAERTEQALQYREIFLHRANALQVTVTEAISQAVANAALELEAKAIITATESGFTARMVSKYRPESPIIAVTKTERMMRRLSLVWGVHPVLRGHASTTDELFEQAVESSLKTGAVSLGDIVIITAGVPVGSSGSTNLMKVHQIGEMIGKGTGIGSQNITGNVCSASSAEEALNKMTDGAILVARSTDKDYMPAIEKASALITELGGITSHAAVVAVSLGIPVIVGVERALDLMKDGMEVSVYPEVGVIYSGRARVL
>NZ_CP019794.1|WP_023483422.1|3376219_3376666_+|acyl-CoA-thioesterase
MSFPWKEHHLRVRYAETDAMGVVYHANYLIWLEVGRTEFIREMGYPYAKMEEQGLLLPVVETNLRYRRPAKYDDAITVYSRIESFTPSKIIFTYEIRRKAEAEQQNEDPAGELLVTGTTVHVWINRSWNPVRIDKEAPELFLFLQENA
>NZ_CP019794.1|WP_077996950.1|3378304_3379603_+|NADP-dependent-isocitrate-dehydrogenase
MPQFESYSLPAEGERITIENGKLQVPNNPIIPFIEGDGTGPDIWASAQRVLDAAVEKAYKGEKKIAWYEVFAGEKAFNKFGSWLPNDTLTAIREYIVAIKGPLTTPVGGGFRSLNVALRQELDLYTCLRPVRYFDGVPSPVKRPELVDMVIFRENTEDIYAGIEYQEGSEEVKKVVEFLKNEMGVNKIRFPETSGIGIKPVSKEGSSRLIRAAIKYAIKHNRKSVTLVHKGNIMKFTEGAFKNWGYELAEKEFGDNTFTWAQYDRIKEEQGVEAANAAQKEAEEAGKIIVKDAIADIALQQVLTRPNDFDVIATLNLNGDYLSDALAAQVGGIGIAPGANINYVTGHAIFEATHGTAPKYAGLDVVNPGSVILSGVMMLEHLGWLEAADLIYKGMAVSINNKTVTYDFARLMEGAKEIKCSEFGSEIIKNMD
>NZ_CP019794.1|WP_077996951.1|3380873_3382025_-|polysaccharide-deacetylase-family-protein
MNWKWLSGTLLASLLGLTLILQPIQAEQKNPSYRDQVAVLMYHHIHDTDKSSGTVTTRLFEDQIRYLKDKGYHFISLTEFKAFMKGASVPSNAVLVTLDDGYKSVYENAYPVLKKYEVPAVSFVITETLDDPESSYIPPMSRDELYQMTHETDFIDIQSHTHASHRKLGNNQAALVGRETVDGKEETKEQYEQRILKDGKTSIEHLSRIYERPVDTIAYPYGIINTESIRLLKKSGFQYGFTIIPQMATRDADPMRIPRINAGSPWITPERLDRIIQKRTIPIPDSPDFFPLDDAMKQLGGDMQLDHQKVIIRYQDRYWVGKIRSMELRGTAGILRLKKPLLLRGGHPMISWKDLQTLTRQQAQYDPATRQISLRKPLMTHSS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019794_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_8

3997147-3998999

Orphan

Consensus_repeat	Method
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CRT

27 spacers

The CRISPR arrays of NZ_CP019794_8

>merge|NZ_CP019794|8|3997147-3998999|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCCATGCGGATGCGTGGATTGAAATAATATGGAGCATCTGATGGAACTGGTTTAATGCGGGTCGCATCCCATGCGGATGCGTGGATTGAAATCCATATACCACAAATGACGCGACCCAGTTGATAGTCGCATCCCATGCGGATGCGTGGATTGAAATATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCTGTCGCATCCCATGCGGATGCGTGGATTGAAATGAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTCGTCGCATCCCATGCGGATGCGTGGATTGAAATTTTTTCCACATCCTTAAACCGGGCAAAATATTCCGGTCGCATCCCATGCGGATGCGTGGATTGAAATACATACGTTGAGCTATTCGCGGCATCGGAGGATTTCGAGTCGCATCCCATGCGGATGCGTGGATTGAAATATTTTCTCAAAAGTTTTCCCGTCAACATGGACCGTCGCATCCCATGCGGATGCGTGGATTGAAATTTCTTAGCCATGTAAATAATCCCCTTTCGCTAACGTCGCATCCCATGCGGATGCGTGGATTGAAATTTCTCTTACATCAACAATCCCTTTATAAATAAAGAGTGTCGCATCCCATGCGGATGCGTGGATTGAAATCCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTAGTCGCATCCCATGCGGATGCGTGGATTGAAATTTTTAATATCGCATTGCCTAATCGCGTTTTAAGATCGTCGCATCCCATGCGGATGCGTGGATTGAAATTCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTAGTCGCATCCCATGCGGATGCGTGGATTGAAATCCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTTGTCGCATCCCATGCGGATGCGTGGATTGAAATTTGGGCAGTATTGGTCACCTCCGATCGGATAGTCGGTCGCATCCCATGCGGATGCGTGGATTGAAATTTGGGCAGTATTGGTCACCTCCGATCGGATAGTCGGTCGCATCCCATGCGGATGCGTGGATTGAAATTACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACAGTCGCATCCCATGCGGATGCGTGGATTGAAATGCTAATGGAAAACAAAGAGAATCATATATCAAAGTCGCATCCCATGCGGATGCGTGGATTGAAATCTTGAAAACTCCTGTTTTATTGTTCATCATGGAAGTCGCATCCCATGCGGATGCGTGGATTGAAATTCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGCGTCGCATCCCATGCGGATGCGTGGATTGAAATTCCAATTACCGGACAATGGCCAAGAAAAAAGAAAGTCGCATCCCATGCGGATGCGTGGATTGAAATTGGCCGCCCCTTGGATATTCGTACAACGCACTTTCGTCGCATCCCATGCGGATGCGTGGATTGAAATTAATTCAAGTGATACGACCATAGCCGCATTGATGTAGTCGCATCCCATGCGGATGCGTGGATTGAAATATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTCGTCGCATCCCATGCGGATGCGTGGATTGAAATATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGCGTCGCATCCCATGCGGATGCGTGGATTGAAATATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAAGTCGCATCCCATGCGGATGCGTGGATTGAAATCATCACCGGGGTGCAGATTTATTGTCAGCGATTTTGTCGCATCCCATGCGGATGCGTGGATTGAAATACCATGAGTTTGCAAAATACATTCAGCGAGAAAATCACGTCGCATCCCATGCGTTCCGTCTTTTGGAATG

>NZ_CP019794|8|4|3997147-3998929|PILER-CR
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	AATATGGAGCATCTGATGGAACTGGTTTAATGCGG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCATATACCACAAATGACGCGACCCAGTTGATA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTTCCACATCCTTAAACCGGGCAAAATATTCCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACATACGTTGAGCTATTCGCGGCATCGGAGGATTTCGA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTTTCTCAAAAGTTTTCCCGTCAACATGGACC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTTAGCCATGTAAATAATCCCCTTTCGCTAAC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTCTTACATCAACAATCCCTTTATAAATAAAGAGT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTAATATCGCATTGCCTAATCGCGTTTTAAGATC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GCTAATGGAAAACAAAGAGAATCATATATCAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CTTGAAAACTCCTGTTTTATTGTTCATCATGGAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCCAATTACCGGACAATGGCCAAGAAAAAAGAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TGGCCGCCCCTTGGATATTCGTACAACGCACTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TAATTCAAGTGATACGACCATAGCCGCATTGATGTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CATCACCGGGGTGCAGATTTATTGTCAGCGATTTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT

>NZ_CP019794|8|8|3997147-3998929|CRISPRCasFinder
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	AATATGGAGCATCTGATGGAACTGGTTTAATGCGG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCATATACCACAAATGACGCGACCCAGTTGATA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTTCCACATCCTTAAACCGGGCAAAATATTCCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACATACGTTGAGCTATTCGCGGCATCGGAGGATTTCGA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTTTCTCAAAAGTTTTCCCGTCAACATGGACC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTTAGCCATGTAAATAATCCCCTTTCGCTAAC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTCTTACATCAACAATCCCTTTATAAATAAAGAGT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTAATATCGCATTGCCTAATCGCGTTTTAAGATC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GCTAATGGAAAACAAAGAGAATCATATATCAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CTTGAAAACTCCTGTTTTATTGTTCATCATGGAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCCAATTACCGGACAATGGCCAAGAAAAAAGAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TGGCCGCCCCTTGGATATTCGTACAACGCACTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TAATTCAAGTGATACGACCATAGCCGCATTGATGTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CATCACCGGGGTGCAGATTTATTGTCAGCGATTTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT

>NZ_CP019794|8|4|3997147-3998999|CRT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	AATATGGAGCATCTGATGGAACTGGTTTAATGCGG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCATATACCACAAATGACGCGACCCAGTTGATA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTTCCACATCCTTAAACCGGGCAAAATATTCCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACATACGTTGAGCTATTCGCGGCATCGGAGGATTTCGA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTTTCTCAAAAGTTTTCCCGTCAACATGGACC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTTAGCCATGTAAATAATCCCCTTTCGCTAAC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTCTTACATCAACAATCCCTTTATAAATAAAGAGT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTAATATCGCATTGCCTAATCGCGTTTTAAGATC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GCTAATGGAAAACAAAGAGAATCATATATCAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CTTGAAAACTCCTGTTTTATTGTTCATCATGGAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCCAATTACCGGACAATGGCCAAGAAAAAAGAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TGGCCGCCCCTTGGATATTCGTACAACGCACTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TAATTCAAGTGATACGACCATAGCCGCATTGATGTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CATCACCGGGGTGCAGATTTATTGTCAGCGATTTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACCATGAGTTTGCAAAATACATTCAGCGAGAAAATCAC
GTCGCATCCCATGCGTTCCGTCTTTTGGAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_188318571.1\|3994792_3995062_+\|RHS-repeat-protein	unknown	unknown	gnl\|CDD\|368509
NZ_CP019794.1\|WP_077995375.1\|3992006_3993230_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019794.1\|WP_077997286.1\|4001508_4001913_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP019794.1\|WP_077997287.1\|4001923_4002655_-\|RNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|211346
NZ_CP019794.1\|WP_188318572.1\|4008506_4009028_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|133002
NZ_CP019794.1\|WP_077997282.1\|3995058_3995835_+\|RHS-repeat-associated-core-domain-containing-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP019794.1\|WP_077997288.1\|4003727_4004744_+\|1,4-alpha-glucan-branching-enzyme	unknown	unknown	gnl\|CDD\|235445
NZ_CP019794.1\|WP_149867785.1\|3999028_3999328_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077997275.1\|3989974_3990235_+\|DUF3885-domain-containing-protein	unknown	unknown	gnl\|CDD\|379022
NZ_CP019794.1\|WP_077995375.1\|3999684_4000908_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019794.1\|WP_077997290.1\|4007351_4008500_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179997
NZ_CP019794.1\|WP_077997289.1\|4006500_4007355_+\|alpha-amylase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|235445
NZ_CP019794.1\|WP_036654509.1\|4004810_4005494_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP019794.1\|WP_077997280.1\|3994139_3994754_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077997277.1\|3990570_3990897_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_149867784.1\|3990976_3991279_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077997661.1\|3991185_3991449_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379729
NZ_CP019794.1\|WP_104932621.1\|4005514_4006384_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019794.1\|WP_077997276.1\|3990284_3990593_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077997279.1\|3991461_3991767_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_188318571.1\|3994792_3995062_+\|RHS-repeat-protein	gnl\|CDD\|368509	pfam05593, RHS_repeat, RHS Repeat. RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.	0.000375402
NZ_CP019794.1\|WP_077995375.1\|3992006_3993230_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.86744e-145
NZ_CP019794.1\|WP_077997286.1\|4001508_4001913_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.215e-24
NZ_CP019794.1\|WP_104932621.1\|4005514_4006384_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.10138e-47
NZ_CP019794.1\|WP_077997282.1\|3995058_3995835_+\|RHS-repeat-associated-core-domain-containing-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	1.21633e-21
NZ_CP019794.1\|WP_077997287.1\|4001923_4002655_-\|RNA-pseudouridine-synthase	gnl\|CDD\|211346	cd02869, PseudoU_synth_RluA_like, Pseudouridine synthase, RluA family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF and TruA. Pseudouridine synthases catalyze the isomerization of specific uridines in a n RNA molecule to pseudouridines (5-ribosyluracil, psi) requiring no cofactors. E. coli RluC for example makes psi955, 2504 and 2580 in 23S RNA. Some psi sites such as psi1917 in 23S RNA made by RluD are universally conserved. Other psi sites occur in a more restricted fashion, for example psi2819 in 21S mitochondrial ribosomal RNA made by S. cerevisiae Pus5p is only found in mitochondrial large subunit rRNAs from some other species and in gram negative bacteria. The E. coli counterpart of this psi residue is psi2580 in 23S rRNA. psi2604in 23S RNA made by RluF has only been detected in E.coli.	6.13598e-57
NZ_CP019794.1\|WP_077997275.1\|3989974_3990235_+\|DUF3885-domain-containing-protein	gnl\|CDD\|379022	pfam13021, DUF3885, Domain of unknown function (DUF3885). A putative Rac prophage DNA binding protein. This domain family is found in bacteria, and is approximately 40 amino acids in length. There is a conserved YDDRG sequence motif. There is a single completely conserved residue D that may be functionally important.	3.14182e-09
NZ_CP019794.1\|WP_077995375.1\|3999684_4000908_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.86744e-145
NZ_CP019794.1\|WP_077997290.1\|4007351_4008500_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP019794.1\|WP_077997289.1\|4006500_4007355_+\|alpha-amylase-C-terminal-domain-containing-protein	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	7.01558e-178
NZ_CP019794.1\|WP_077997288.1\|4003727_4004744_+\|1,4-alpha-glucan-branching-enzyme	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
NZ_CP019794.1\|WP_077997661.1\|3991185_3991449_+\|hypothetical-protein	gnl\|CDD\|379729	pfam15542, Ntox50, Bacterial toxin 50. A predicted RNase toxin found in bacterial polymorphic toxin systems that is proposed to adopt the BECR (Barnase-EndoU-ColicinE5/D-RelE) fold, and contains two conserved histidine, a serine, two lysine, and a threonine residue and a HxVP motif. In bacterial polymorphic toxin systems, the toxin is usually exported by the type 2, type 6, type 7, and MuF-type secretion systems.	9.78244e-31
NZ_CP019794.1\|WP_188318572.1\|4008506_4009028_+\|hypothetical-protein	gnl\|CDD\|133002	cd02508, ADP_Glucose_PP, ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch. ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.	1.00292e-44
NZ_CP019794.1\|WP_036654509.1\|4004810_4005494_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	7.48767e-10

>NZ_CP019794.1|WP_077997282.1|3995058_3995835_+|RHS-repeat-associated-core-domain-containing-protein
MTYGKDNRLDTYNGMKVEYDADGNQITGPLGESRESFKYDARNRLIQAGQTAYAYNSENNRISVTKGNSVTKYVVNPHAMLSQILMETDGNGKGQAWYVYGLGLIGREDSEGTYQTYHYDRRGSTAALTALSGEVTDRYVYGPYGELLRKTGDTKQPFLYNGRDGVVTDDNGLYYMRARYYNPDIKRFINRDVLTGSISVGQSLNRYAYVNGNPVSYVDPFGLSRDSDTSPYAHAANFVLDFIPFVGSVKGAYEAFTA
>NZ_CP019794.1|WP_188318571.1|3994792_3995062_+|RHS-repeat-protein
MFFNHCCNLEQTIRPDGSKETRTYDAAGQLLTLSDRAADGSSISEYTFTYDANGNVSTEDNKVPDITVQGPEQKGAGLSPPHCLPEKRR
>NZ_CP019794.1|WP_077997280.1|3994139_3994754_+|hypothetical-protein
MGYEPKLSVFSINGSMIFNQEDKKKFNELCGNILNKVASQRSYMENFRYYLFVIEISNNNPKISVYLKLWKKIMRKWDLSKFILGPEVEYVDRGNLYYTGIAEFNLMDLPSVLEIVGSNSGRYSIFASRKQNILTKDYTRSLFDSIFIIGNRKKEIDIVKMVLKICIEGDLVFRWGDSSEECELDIIIPENNLQVFDGISLEQS
>NZ_CP019794.1|WP_077995375.1|3992006_3993230_-|IS256-family-transposase
MAQYQINVDSQLLHQLFLGNSQDAGVAKLLESVLNQVLQAQVSEQVEADRYERTENRKAYRNGSYPHGLHTRVGTITLSVPRIRGGKFTTELFSRYQRSEQALILAMMEMVVNGVSTRKVSQVTEELCGTEFSKSTVSDLCKRLDPIVTAWNNRSLADSLFPFVLVDAMYLKVREDGRVRSRGIMIAIGVNTEGYREVLGLMLGDTESEASWSEFFISLKGRGLRGVDLITSDDHGGLVRAVRQQLQGVTWQRCQTHFTRNVLEASPKALKDEIHGRLRSILDAPDTGTARLLLKQTLAAYEDKAGKAMGVLESGFDDATAVLMLPERYRKRLRTTNSVERLNEEVRRRERVIRIFPNRESVIRLIGALLMEQDEKWAAGKKYLDMTEYMEWRKDRPKSDAKVTRIM
>NZ_CP019794.1|WP_077997279.1|3991461_3991767_+|hypothetical-protein
MDSLIQSISGYPNGTILVVEWTDGKKIRGWIDTIFETDNGIELDDENYQEYYAFLIRVQSVLQKPLLKNEKKPVGSLIEVSERDNISKISLEDGTVIWKSK
>NZ_CP019794.1|WP_077997661.1|3991185_3991449_+|hypothetical-protein
MHAGKQGKHIPGHSNYQYGKSILTANAQKLLEKYAGKGEWIGQNKERVDFGEIIGKYVDPITGEAIETNKGIIHYSKNGAHIVPARP
>NZ_CP019794.1|WP_149867784.1|3990976_3991279_+|hypothetical-protein
MIGSILGALPIPGAKQGGKYLTKGTIELEEQLEKSLVSAGTSKYRLPMDLQLFAGRGKGYLKLLMVSTQLYMLVNRENTFLDIQTISTVKVSLLLMHKSY
>NZ_CP019794.1|WP_077997277.1|3990570_3990897_+|hypothetical-protein
MEKLLSVEFPERDILVSQLKNAKVIGNYLCGCRTIDINIDSTCSKFPNSKRVPVEMIIHNGQSAPIIFYLHVLNGYIKELEIFKADSKPISEKFELNNAQININVKND
>NZ_CP019794.1|WP_077997276.1|3990284_3990593_+|hypothetical-protein
MDMVEGTGLDIEIVNRTIANGVTKQNLSKGQFYKGVVKVEDKTIEYISYGLGDGKINHRDILSKIINCEELNYVKSSLAELVSTRKKFYRRRESLVGKTSKC
>NZ_CP019794.1|WP_077997275.1|3989974_3990235_+|DUF3885-domain-containing-protein
MTLRVYIKRKVKDIKLDDLLVSMADGNVYGDIYLINSKKHVIYDLYDDRGLDIISCYKESLYKLYTDYNNWILEYDRKRIDKIFLS
>NZ_CP019794.1|WP_149867785.1|3999028_3999328_-|hypothetical-protein
MMKHVKSKMAIIFSILAALLIIPIPSSAATQQDCSSEIGSSCKQVIMNFSDHDAQSEALYLTRGTDIQYWFDSSSSSKHLVNVGVIRYPDYYLVNQFVV
>NZ_CP019794.1|WP_077995375.1|3999684_4000908_-|IS256-family-transposase
MAQYQINVDSQLLHQLFLGNSQDAGVAKLLESVLNQVLQAQVSEQVEADRYERTENRKAYRNGSYPHGLHTRVGTITLSVPRIRGGKFTTELFSRYQRSEQALILAMMEMVVNGVSTRKVSQVTEELCGTEFSKSTVSDLCKRLDPIVTAWNNRSLADSLFPFVLVDAMYLKVREDGRVRSRGIMIAIGVNTEGYREVLGLMLGDTESEASWSEFFISLKGRGLRGVDLITSDDHGGLVRAVRQQLQGVTWQRCQTHFTRNVLEASPKALKDEIHGRLRSILDAPDTGTARLLLKQTLAAYEDKAGKAMGVLESGFDDATAVLMLPERYRKRLRTTNSVERLNEEVRRRERVIRIFPNRESVIRLIGALLMEQDEKWAAGKKYLDMTEYMEWRKDRPKSDAKVTRIM
>NZ_CP019794.1|WP_077997286.1|4001508_4001913_+|MarR-family-transcriptional-regulator
MYSNEFAKFWSKLSKELRMKMEDQLSPTITEGQLHVLELLNQQGCMKPSDFIEYLETTPAAVTTLLDRMERGGLIKRVRDEKDRRIVWVHVTDKGKAECSRGIEIRDELLKSYLNRISAHNQQLFVYLLGKVAG
>NZ_CP019794.1|WP_077997287.1|4001923_4002655_-|RNA-pseudouridine-synthase
MAGPKHAPDGGGSIPVLFEDNHLLVVEKPVNMPTQEDSSRDPDLLSVLKADLKHRYGKPGNVYLGLVHRLDRPVGGVMVFAKTSKAASRLSDAVRTRAFDKTYLAVVHGKPADPQGTLRHHLRKDTRTNTALVVRPGAEGAKEAILDYRVLGHAEGLSLVQVKLHTGRPHQIRVQLAAIGCPLYGDQRYGAGRNKPGQQLALWSALLAFSHPTLKEPLRFTAAPPDTYPWYLWKELIAKLKLD
>NZ_CP019794.1|WP_077997288.1|4003727_4004744_+|1,4-alpha-glucan-branching-enzyme
MTKLLPSPKDLYLYREGTLFFSYLTMGAHLVTEHGQEGVRFTVWAPHAAEVRVAGDFNGWTTKDHRMKQAGDPEVWSLFIPGVSEGERYKFEIHTADGRVLLKADPYAFYAEKRPDTASRVYNLYGYEWGDSDYIKRKKKEAPYQQPLLVYEVHLGTWKRNGTGEDSAYSYRELADKLVPYAARMGYTHLELMPLAEHPFDRSWGYQVTGYYAVTSRFGTPHDFMYFVDKCHQYGVGVIMDWVPGHFCKDDHGLRQFDGEPLYECENPLMAEKPEWGTLAFDFGKPEVVSFLISNALFWMDMFHIDGLRVDAVAHMLYLNFGKPESMRTTNSLGGEEN
>NZ_CP019794.1|WP_036654509.1|4004810_4005494_+|helix-turn-helix-domain-containing-protein
MSHKAKVSGSEKIAAVEKYLRGEDSLNHLAALLDVRHSSVRQWLQTYQSLGPNGLLQTSQNASYSAELKRIAVEDYLAGGGSHMDICKRYGIKSTCQLRDWILKYNSHEKLNTSGTGGVPIMTKGRTTTYDERVEIVRFCIEHQHNYAQTADKFQVSYQQVYSWTNKYLTSGVDALQDRRGKRKSEDEMSEVEKLRAQNKLLQAENRRKQMEIDLLKKLDEIERRRF
>NZ_CP019794.1|WP_104932621.1|4005514_4006384_+|IS3-family-transposase
MYLAIRGLRETKSYPICQLCDLIGIQRSSYYKWINRKESINEIFNKALLPMIKDAYEEKDGILGYRQMTIKLNRERHVTVNHKRIYRLMGILGLKSVCRRKRKNYIHSTPEITAENILNRDFESSEFGTKWLTDVTEMKYGNQNKAYLSAILDLSDKSIVSFVVGHSNNNELVFKTFDIAHMTYPDATPLFHSDRGFQYTCKIFKKKLDDAGMIQSMSRVSRCIDNGPMESFWGMMKSEMYYLRKFYTYEELEAAVIEYIDYYNTRRYQKRLNCMTPLEYRQYLLSSAA
>NZ_CP019794.1|WP_077997289.1|4006500_4007355_+|alpha-amylase-C-terminal-domain-containing-protein
MMAEDSTDWPDVTKPVYESGLGFNYKWNMGWMNDMLSYMKLDPIHRRYHHNLITFSLMYAFNENYILPLSHDEVVHGKRSLLHKMPGDYWQKFANLRLFYGYMMAHPGKKLLFMGGEFGQYDEWKDVSGLDWFLLDYESHRSMHRYVKELNAFYSGEPAFWEQDHKSGGFQWIHADDRTKSVVSFIRKGSRKQDEIIVVCNFTPEIYQNYRIGIPQPGRYREVWNSDAPSYGGSGKANHHQMKTDPIPWNGFPYSLSLLVPPLSAVYLKRTERKRTAGQRGEEI
>NZ_CP019794.1|WP_077997290.1|4007351_4008500_+|glucose-1-phosphate-adenylyltransferase
MKKKECIAMLLAGGEGRRLGILTKNLAKPAVHFGGKYRIIDFTLSNCTNSGIHTIGVLTQYQPHELNTYIGIGSPWDLDRKDGGVTVLSPYIRQKGGDWYSGTANAIYQNINFIEQYDPEYVLVISGDHIYKMDYNKLLLNHKKSGADATIAVIEVDWREVSRFGIMNTDETGRIVEFDEKPKEPKSNLASMGVYMFTWKSLKLYLERDKQNPLSSNDFGKDIIPAMLEDKVRMMAYSFEGYWKDVGTIQSLWEANMDLLDEDNGLDLDDKRSRIYSVNPYQPAQYIASSAEVRDSLVNEGCSVFGKVDHSVLFYGVRVEENAYVQDSVLMPHVSVGQNVTIRKAIIGEHTVIEDGAEIGDGGEIVLIGSNETIRAVSHMKG
>NZ_CP019794.1|WP_188318572.1|4008506_4009028_+|hypothetical-protein
MKQLMGIINLVHEPDDLEELTIYRNTACVPFGGRYRLIDFMLSNMVNSGIGNVAVFTHHKYRSLMDHLGSGKEWDLDRKRGGLFLLPSLGDGSNGTVRGDLFQLYTNRDFFIVEKNNWCSWQGAMWSAIFSLMRQSVSMRRKKRTSRLFIKRWNLIRVPNFIAWRYGETTALR

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Crispr_ID: NZ_CP019794_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_10

4404815-4405384

Orphan

I-C

Consensus_repeat	Method
GTCGCATCCTATACGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CRT

8 spacers

The CRISPR arrays of NZ_CP019794_10

>merge|NZ_CP019794|10|4404815-4405384|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCTATACGGATGCGTGGATTGAAATCAGAAGTACCCCTTGGGACATATGATGTGAAGATTGTCGCATCCTATACGGATGCGTGGATTGAAATGTGAACAGACCTCATGATGACCAATAAATGATTACGTCGCATCCTATACGGATGCGTGGATTGAAATCATTTTAGTAACAAAACTGGAATAGCTTTCGATAGTCGCATCCTATACGGATGCGTGGATTGAAATTCCTGATTCTATGACAACGTCAAAATATTTCTTGTCGCATCCTATACGGATGCGTGGATTGAAATTTTCGTAATGTAAGTTTCATGTTTTCCAGACAAAGTCGCATCCTATACGGATGCGTGGATTGAAATGTCAATATGGGATCGATAAATTTGGAGCGAATTGATAAGTCGCATCCTATACGGATGCGTGGATTGAAATGAATTTGTAAAAGTTCTACAAGATGAAGATATTACGTCGCATCCTATACGGATGCGTGGATTGAAATACCACAATATTTTTTAGGCCATTCCAAATGCCCTTGACGTCGCATCATATACGGATACGTGGATTGAAAC

>NZ_CP019794|10|7|4404815-4405314|PILER-CR
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CAGAAGTACCCCTTGGGACATATGATGTGAAGATT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTGAACAGACCTCATGATGACCAATAAATGATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CATTTTAGTAACAAAACTGGAATAGCTTTCGATA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TCCTGATTCTATGACAACGTCAAAATATTTCTT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TTTCGTAATGTAAGTTTCATGTTTTCCAGACAAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTCAATATGGGATCGATAAATTTGGAGCGAATTGATAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GAATTTGTAAAAGTTCTACAAGATGAAGATATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT

>NZ_CP019794|10|10|4404815-4405384|CRISPRCasFinder
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CAGAAGTACCCCTTGGGACATATGATGTGAAGATT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTGAACAGACCTCATGATGACCAATAAATGATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CATTTTAGTAACAAAACTGGAATAGCTTTCGATA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TCCTGATTCTATGACAACGTCAAAATATTTCTT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TTTCGTAATGTAAGTTTCATGTTTTCCAGACAAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTCAATATGGGATCGATAAATTTGGAGCGAATTGATAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GAATTTGTAAAAGTTCTACAAGATGAAGATATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	ACCACAATATTTTTTAGGCCATTCCAAATGCCCTTGAC
GTCGCATCATATACGGATACGTGGATTGAAAC

>NZ_CP019794|10|6|4404815-4405384|CRT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CAGAAGTACCCCTTGGGACATATGATGTGAAGATT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTGAACAGACCTCATGATGACCAATAAATGATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CATTTTAGTAACAAAACTGGAATAGCTTTCGATA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TCCTGATTCTATGACAACGTCAAAATATTTCTT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TTTCGTAATGTAAGTTTCATGTTTTCCAGACAAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTCAATATGGGATCGATAAATTTGGAGCGAATTGATAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GAATTTGTAAAAGTTCTACAAGATGAAGATATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	ACCACAATATTTTTTAGGCCATTCCAAATGCCCTTGAC
GTCGCATCATATACGGATACGTGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_077997488.1\|4399294_4399960_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP019794.1\|WP_188318586.1\|4394163_4394886_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|366736
NZ_CP019794.1\|WP_188318587.1\|4404396_4404660_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_149867812.1\|4398055_4399132_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077997489.1\|4401799_4402147_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274926
NZ_CP019794.1\|WP_077584960.1\|4395437_4396037_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077997681.1\|4400165_4400471_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP019794.1\|WP_077997484.1\|4392030_4392453_+\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|224679
NZ_CP019794.1\|WP_077997486.1\|4395264_4395450_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_042118951.1\|4396065_4396260_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_077997488.1\|4399294_4399960_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	8.32832e-22
NZ_CP019794.1\|WP_188318586.1\|4394163_4394886_+\|phosphotransferase	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	1.07654e-10
NZ_CP019794.1\|WP_077997484.1\|4392030_4392453_+\|OsmC-family-protein	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	5.65081e-32
NZ_CP019794.1\|WP_077997681.1\|4400165_4400471_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	3.32428e-27
NZ_CP019794.1\|WP_077997489.1\|4401799_4402147_+\|hypothetical-protein	gnl\|CDD\|274926	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily consists of proteins mostly from species that lack the capability to synthesize F420, and therefore most likely all bind FMN.	2.98878e-41

>NZ_CP019794.1|WP_188318587.1|4404396_4404660_+|hypothetical-protein
MVRGYINSGHACFCICFQYCIHSGIRRVKQKIAMEADMEYYGYKKVDTSVIDILSWQYFLQVIGGILCYQIIIEVKDLISSANVKYT
>NZ_CP019794.1|WP_077997489.1|4401799_4402147_+|hypothetical-protein
MSNPGIGLIFLIPGLEETLRINGWACITKNSELMNRMQVRGKTPLLVLEFEVEECYVHCAKAFKRSQAWEPGSWLNLPKVSKMLAAHVNCEDFTEEVIAKGLDERTFGLWNFPFP
>NZ_CP019794.1|WP_077997681.1|4400165_4400471_-|class-I-SAM-dependent-methyltransferase
MNAVLNANAEAGLPAIDVSPNQGKLLYLLAKMKGCRNILAIGTLGGYSSIGMARALPEDGQLITLEFDPEHAKVAEKNIRNDGLDHKIEIITGPALETLPP
>NZ_CP019794.1|WP_077997488.1|4399294_4399960_+|ATP-binding-cassette-domain-containing-protein
MTHEQFKCLSGPFCFRKQPIFVKQEVSVAKGNIVGIIGENGIGKSTFVNLLAGNITSTLQINYHNKSLVPGYNPFVFFQPDDFTGLEYLTTLEVTQYFLLLYGEEFDQEKFDLLVQVANIQKEKVLKEYIKNLSKGTRQKVVFIIYMMANRDIIIFDEGLENIDADSLASILAYLKKWVKTENKLCLIATHSTTILEYADQFLHLIREEEGTTRIMPVSED
>NZ_CP019794.1|WP_149867812.1|4398055_4399132_+|hypothetical-protein
MFIKDALFELNGIILILINLVILLEIKVLAILLLLFISQAFKSTSGQTFLLVLYSMLYVFPIFYFHSTYLAVFTIFAGFFVVCFALYFCVYLIGARNRNMKGTRGRWFLLFADIQRLIRRLVETKISLSRFAFPPYILLYVFLFWVLDMFPSFFAQFSIGKDMLVSLSLILYVGIYFIYTKTSVLLLDDCFYFSATKIELYATNPVFSYFRKITVLLVFNVFSIFWGLCYLNLVLKMNGDFAKIGLMFFIHLFMLPIFVSANIFVDKNKAEVTQYPEDFKKYVSFIEAFFFFILFISVHLLVIMHYDPRTAVLITSHLFDINVYLLGTLVVISAVISIVKTLTHMGVVRKSIKRGFYE
>NZ_CP019794.1|WP_042118951.1|4396065_4396260_+|hypothetical-protein
MFELIASGISAGNAAQVINAVFNGLSIVSALSLCAGIAGGAAWFLSNGIGYMIKWAGKKTIIDW
>NZ_CP019794.1|WP_077584960.1|4395437_4396037_+|hypothetical-protein
MIGLIIIFCSIFFYIVSAIPVIATYFVFGESFAIILKEKGLIAAISTYPHFLPETLSTMLLLSIAFVISAKMLKIVFKNESILKNKKKILKTYLVSNVLLIFAAFIEALKIGDRKLINEIYFVSIGSKLIFSTVAVLTLISATSWNFIFASVGAIILYIIYFFANKQNTISERTRKVIARGDECLRIYSYGSRGFMPCL
>NZ_CP019794.1|WP_077997486.1|4395264_4395450_+|hypothetical-protein
MKAYISVGHKAAIFLIGLSILVGFIYGFVFEDIDQIKTIGFDGLNVLETFFQIFSIILSLV
>NZ_CP019794.1|WP_188318586.1|4394163_4394886_+|phosphotransferase
MSTDKGDFLVKPFSRRKTGPKLTTREQITRLSSYIQKLKESGYPHLPNWLVTKSGQYWVSHNGRPYYMTDWVEGSGIQSEEDYENLGRALATLHTNCKDSLPSMSRYTYKQTKLFKLQDQLFRRQLLTIRRNKSKGKWFREHGGLCIELANKSWSILRKPETKQIMEEEINHPTLIHGDVTLPNIIIHPSRPFLIDWDLLRMGSTYYETAKTLLNTTNFDPQKYLCSNKGLRTNKRVDSG
>NZ_CP019794.1|WP_077997484.1|4392030_4392453_+|OsmC-family-protein
MKVTTIWQGKRAFTSVGPSGYSVTMDATAAYGGDGKGATPMELILAGLAGCMGIDITMILRSTLDTIQSIEIEAEGTRDEEPPKGFTAIDLVFKINGDVPDHRIWRAIELGKEKYCAVSDSLKADIRYKLILNGKEAVKP

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Crispr_ID: NZ_CP019794_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019794_9

4402526-4404169

Orphan

I-C

Consensus_repeat	Method
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	PILER-CR

24 spacers

The CRISPR arrays of NZ_CP019794_9

>merge|NZ_CP019794|9|4402526-4404169|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAATATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAAGTCGCATCCTACGCGGATGCGTGGATTGAAATAGTCTCTGAACTTGTAGTGGCTGGAATCACTACAGTCGCATCCTACGCGGATGCGTGGATTGAAATCTTGATCTCAAGCTGAACAACGGTGATGAACGTCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAATAATGATGGAGCAATATAAACACGCAACCAATTATAGTCGCATCCTACGCGGATGCGTGGATTGAAATACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAAGTCGCATCCTACGCGGATGCGTGGATTGAAATAATATCCACGAATTAGGTTATACTTGACGTATCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCCGTCGCATCCTACGCGGATGCGTGGATTGAAATAATATTAAGACCATGTAATTGATTAACATGTTTGATGTCGCATCCTACGCGGATGCGTGGATTGAAATATGGACACGAAGCACCTTTCGCAATTAGCGAACACACGTCGCATCCTACGCGGATGCGTGGATTGAAATATCTTGATTAAGATACAAACTATCAATTGTGTAGTCGCATCCTACGCGGATGCGTGGATTGAAATATGGACACGAAGCACCTTTCGCAATTAGCGAACACACGTCGCATCCTACGCGGATGCGTGGATTGAAATCTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCGGTCGCATCCTACGCGGATGCGTGGATTGAAATACAACATATCCTGATCAAGCGCGTTTAGTAACCTGTCGCATCCTACGCGGATGCGTGGATTGAAATATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGTGTCGCATCCTACGCGGATGCGTGGATTGAAATAGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCACGTCGCATCCTACGCGGATGCGTGGATTGAAATATACGGCAATGAATATGGGCCTCAACAAGTTCTAGTCGCATCCTACGCGGATGCGTGGATTGAAATGCTGAACTCGATATCCATATCTGGAGATAACTCTTGTCGCATCCTACGCGGATGCGTGGATTGAAATGGCGATCAAATGGAACCCGGGGAAACAATTAGAGTCGCATCCTACGCGGATGCGTGGATTGAAATAACCATGTAAACGACGACTTTGCCGTGTATTCTTGTCGCATCCTACGCGGATGCGTGGATTGAAATCTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCAGTCGCATCCTACGCGGATGCGTGGATTGAAATATCTCTCTATCATGGAAAAAAATAGACGAATAAAGGGTCGCATCCTACGCGGATGCGTGGATTGAAATACACTGTCCGTCAGAAAAAACCGACTGTTCCACGTCGCATCCTACGCGGATGCGTGGATTGAAATT

>NZ_CP019794|9|5|4402526-4402761|PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATGATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATCCACGAATTAGGTTATACTTGACGTATCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC


>NZ_CP019794|9|9|4402526-4404169|CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCAACATAATTTTGTTTTCTAATTAAAAGTAAATC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAACAGTGAGCGGAATCAGAAAGCAAGCCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATGATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATCCACGAATTAGGTTATACTTGACGTATCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAATT

>NZ_CP019794|9|5|4402526-4404168|CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCAACATAATTTTGTTTTCTAATTAAAAGTAAATC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAACAGTGAGCGGAATCAGAAAGCAAGCCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATGATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATCCACGAATTAGGTTATACTTGACGTATCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT

>NZ_CP019794|9|6|4402862-4404168|PILER-CR
	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATGATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATCCACGAATTAGGTTATACTTGACGTATCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019794.1\|WP_077997488.1\|4399294_4399960_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP019794.1\|WP_188318586.1\|4394163_4394886_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|366736
NZ_CP019794.1\|WP_077997681.1\|4400165_4400471_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP019794.1\|WP_149867812.1\|4398055_4399132_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077997489.1\|4401799_4402147_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274926
NZ_CP019794.1\|WP_077584960.1\|4395437_4396037_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_188318587.1\|4404396_4404660_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_077997483.1\|4391240_4391987_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP019794.1\|WP_077997484.1\|4392030_4392453_+\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|224679
NZ_CP019794.1\|WP_077997486.1\|4395264_4395450_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019794.1\|WP_042118951.1\|4396065_4396260_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019794.1\|WP_077997488.1\|4399294_4399960_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	8.32832e-22
NZ_CP019794.1\|WP_188318586.1\|4394163_4394886_+\|phosphotransferase	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	1.07654e-10
NZ_CP019794.1\|WP_077997681.1\|4400165_4400471_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	3.32428e-27
NZ_CP019794.1\|WP_077997489.1\|4401799_4402147_+\|hypothetical-protein	gnl\|CDD\|274926	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily consists of proteins mostly from species that lack the capability to synthesize F420, and therefore most likely all bind FMN.	2.98878e-41
NZ_CP019794.1\|WP_077997483.1\|4391240_4391987_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.34776e-144
NZ_CP019794.1\|WP_077997484.1\|4392030_4392453_+\|OsmC-family-protein	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	5.65081e-32

>NZ_CP019794.1|WP_077997489.1|4401799_4402147_+|hypothetical-protein
MSNPGIGLIFLIPGLEETLRINGWACITKNSELMNRMQVRGKTPLLVLEFEVEECYVHCAKAFKRSQAWEPGSWLNLPKVSKMLAAHVNCEDFTEEVIAKGLDERTFGLWNFPFP
>NZ_CP019794.1|WP_077997681.1|4400165_4400471_-|class-I-SAM-dependent-methyltransferase
MNAVLNANAEAGLPAIDVSPNQGKLLYLLAKMKGCRNILAIGTLGGYSSIGMARALPEDGQLITLEFDPEHAKVAEKNIRNDGLDHKIEIITGPALETLPP
>NZ_CP019794.1|WP_077997488.1|4399294_4399960_+|ATP-binding-cassette-domain-containing-protein
MTHEQFKCLSGPFCFRKQPIFVKQEVSVAKGNIVGIIGENGIGKSTFVNLLAGNITSTLQINYHNKSLVPGYNPFVFFQPDDFTGLEYLTTLEVTQYFLLLYGEEFDQEKFDLLVQVANIQKEKVLKEYIKNLSKGTRQKVVFIIYMMANRDIIIFDEGLENIDADSLASILAYLKKWVKTENKLCLIATHSTTILEYADQFLHLIREEEGTTRIMPVSED
>NZ_CP019794.1|WP_149867812.1|4398055_4399132_+|hypothetical-protein
MFIKDALFELNGIILILINLVILLEIKVLAILLLLFISQAFKSTSGQTFLLVLYSMLYVFPIFYFHSTYLAVFTIFAGFFVVCFALYFCVYLIGARNRNMKGTRGRWFLLFADIQRLIRRLVETKISLSRFAFPPYILLYVFLFWVLDMFPSFFAQFSIGKDMLVSLSLILYVGIYFIYTKTSVLLLDDCFYFSATKIELYATNPVFSYFRKITVLLVFNVFSIFWGLCYLNLVLKMNGDFAKIGLMFFIHLFMLPIFVSANIFVDKNKAEVTQYPEDFKKYVSFIEAFFFFILFISVHLLVIMHYDPRTAVLITSHLFDINVYLLGTLVVISAVISIVKTLTHMGVVRKSIKRGFYE
>NZ_CP019794.1|WP_042118951.1|4396065_4396260_+|hypothetical-protein
MFELIASGISAGNAAQVINAVFNGLSIVSALSLCAGIAGGAAWFLSNGIGYMIKWAGKKTIIDW
>NZ_CP019794.1|WP_077584960.1|4395437_4396037_+|hypothetical-protein
MIGLIIIFCSIFFYIVSAIPVIATYFVFGESFAIILKEKGLIAAISTYPHFLPETLSTMLLLSIAFVISAKMLKIVFKNESILKNKKKILKTYLVSNVLLIFAAFIEALKIGDRKLINEIYFVSIGSKLIFSTVAVLTLISATSWNFIFASVGAIILYIIYFFANKQNTISERTRKVIARGDECLRIYSYGSRGFMPCL
>NZ_CP019794.1|WP_077997486.1|4395264_4395450_+|hypothetical-protein
MKAYISVGHKAAIFLIGLSILVGFIYGFVFEDIDQIKTIGFDGLNVLETFFQIFSIILSLV
>NZ_CP019794.1|WP_188318586.1|4394163_4394886_+|phosphotransferase
MSTDKGDFLVKPFSRRKTGPKLTTREQITRLSSYIQKLKESGYPHLPNWLVTKSGQYWVSHNGRPYYMTDWVEGSGIQSEEDYENLGRALATLHTNCKDSLPSMSRYTYKQTKLFKLQDQLFRRQLLTIRRNKSKGKWFREHGGLCIELANKSWSILRKPETKQIMEEEINHPTLIHGDVTLPNIIIHPSRPFLIDWDLLRMGSTYYETAKTLLNTTNFDPQKYLCSNKGLRTNKRVDSG
>NZ_CP019794.1|WP_077997484.1|4392030_4392453_+|OsmC-family-protein
MKVTTIWQGKRAFTSVGPSGYSVTMDATAAYGGDGKGATPMELILAGLAGCMGIDITMILRSTLDTIQSIEIEAEGTRDEEPPKGFTAIDLVFKINGDVPDHRIWRAIELGKEKYCAVSDSLKADIRYKLILNGKEAVKP
>NZ_CP019794.1|WP_077997483.1|4391240_4391987_+|amino-acid-ABC-transporter-ATP-binding-protein
MIQTTGLTKAFQDTVVLKDINLQVKQNEIVVLLGPSGSGKSTLLRCINGLEELSGGTVEVNGIHIDAKMPARQRRARILEIRRETGMVFQQFNLYPHKTALGNVIESLLVVKKMRREEAIKIGEQLLDRVGLADKKDVYPSRLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPELVGEVLDVMQQLAKDGMTMLVVTHEMKFARKVADRIVFMDAGIIVEEADPDAFFESPQSERARKFLKILDHE
>NZ_CP019794.1|WP_188318587.1|4404396_4404660_+|hypothetical-protein
MVRGYINSGHACFCICFQYCIHSGIRRVKQKIAMEADMEYYGYKKVDTSVIDILSWQYFLQVIGGILCYQIIIEVKDLISSANVKYT

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP019794_4	4.7\|1637526\|36\|NZ_CP019794\|CRISPRCasFinder,CRT	1637526-1637561	36	NZ_CP019794.1	85064-85099	0	1.0
NZ_CP019794_5	5.1\|2090665\|54\|NZ_CP019794\|CRISPRCasFinder	2090665-2090718	54	NZ_CP019794.1	2414373-2414426	0	1.0
NZ_CP019794_6	6.1\|2584042\|56\|NZ_CP019794\|CRISPRCasFinder	2584042-2584097	56	NZ_CP019794.1	2414373-2414428	0	1.0
NZ_CP019794_8	8.17\|3998255\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998255-3998287	33	NZ_CP019796.1	21771-21803	0	1.0
NZ_CP019794_8	8.18\|3998320\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998320-3998353	34	NZ_CP019796.1	19759-19792	2	0.941

1. spacer 4.7|1637526|36|NZ_CP019794|CRISPRCasFinder,CRT matches to position: 85064-85099, mismatch: 0, identity: 1.0

ttgacgattaaatcaaaatcagacggatatccgaca	CRISPR spacer
ttgacgattaaatcaaaatcagacggatatccgaca	Protospacer
************************************

2. spacer 5.1|2090665|54|NZ_CP019794|CRISPRCasFinder matches to position: 2414373-2414426, mismatch: 0, identity: 1.0

ctaccatttttgcaaagcaaaatatggcccattcagatcggatttttcgaagcg	CRISPR spacer
ctaccatttttgcaaagcaaaatatggcccattcagatcggatttttcgaagcg	Protospacer
******************************************************

3. spacer 6.1|2584042|56|NZ_CP019794|CRISPRCasFinder matches to position: 2414373-2414428, mismatch: 0, identity: 1.0

cgcttcgaaaaatccgatctgaatgggccatattttgctttgcaaaaatggtagtc	CRISPR spacer
cgcttcgaaaaatccgatctgaatgggccatattttgctttgcaaaaatggtagtc	Protospacer
********************************************************

4. spacer 8.17|3998255|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to position: 21771-21803, mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

5. spacer 8.18|3998320|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to position: 19759-19792, mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019794_1	1.12\|63973\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63973-64007	35	KT361653	Paenibacillus phage Paisley, complete genome	27234-27268	0	1.0
NZ_CP019794_1	1.12\|63973\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63973-64007	35	NC_028746	Paenibacillus phage Harrison, complete genome	27236-27270	0	1.0
NZ_CP019794_2	2.6\|77560\|38\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77560-77597	38	MH431930	Paenibacillus phage Wanderer, complete genome	35753-35790	0	1.0
NZ_CP019794_2	2.6\|77560\|38\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77560-77597	38	MH454081	Paenibacillus phage LincolnB, complete genome	35743-35780	0	1.0
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	KP296792	Bacteriophage Lily, complete genome	44282-44335	0	1.0
NZ_CP019794_8	8.4\|3997376\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3997376-3997411	36	MH431930	Paenibacillus phage Wanderer, complete genome	13687-13722	0	1.0
NZ_CP019794_8	8.4\|3997376\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3997376-3997411	36	MG727697	Paenibacillus phage Dragolir, complete genome	13687-13722	0	1.0
NZ_CP019794_8	8.4\|3997376\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3997376-3997411	36	MH454081	Paenibacillus phage LincolnB, complete genome	13686-13721	0	1.0
NZ_CP019794_8	8.17\|3998255\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998255-3998287	33	NZ_CP020329	Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence	28144-28176	0	1.0
NZ_CP019794_8	8.17\|3998255\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998255-3998287	33	NZ_CP019796	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence	21771-21803	0	1.0
NZ_CP019794_8	8.17\|3998255\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998255-3998287	33	NZ_CP019661	Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence	22729-22761	0	1.0
NZ_CP019794_8	8.17\|3998255\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998255-3998287	33	NZ_CP019658	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence	22730-22762	0	1.0
NZ_CP019794_8	8.25\|3998794\|37\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998794-3998830	37	MH431930	Paenibacillus phage Wanderer, complete genome	23452-23488	0	1.0
NZ_CP019794_8	8.25\|3998794\|37\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998794-3998830	37	MH454081	Paenibacillus phage LincolnB, complete genome	23442-23478	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH431934	Paenibacillus phage Gryphonian, complete genome	35354-35386	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MG727696	Paenibacillus phage Kiel007, complete genome	35344-35376	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH454082	Paenibacillus phage Genki, complete genome	35353-35385	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	KP296793	Bacteriophage Rani, complete genome	35348-35380	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MG727701	Paenibacillus phage Leyra, complete genome	37355-37387	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH431937	Paenibacillus phage Lucielle, complete genome	35306-35338	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH454077	Paenibacillus phage Bloom, complete genome	35332-35364	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH454083	Paenibacillus phage Saudage, complete genome	35321-35353	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	KP296794	Bacteriophage Redbud, complete genome	35330-35362	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH431933	Paenibacillus phage DevRi, complete genome	35333-35365	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	NC_048689	Paenibacillus phage PBL1c, complete genome	35717-35749	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MG727700	Paenibacillus phage Tadhana, complete genome	35242-35274	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	KP296795	Bacteriophage Shelly, complete genome	36231-36263	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	NC_028788	Bacteriophage Diva, complete genome	34605-34637	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH431932	Paenibacillus phage Arcticfreeze, complete genome	35331-35363	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	KT361652	Paenibacillus phage Xenia, complete genome	36228-36260	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH431935	Paenibacillus phage Honeybear, complete genome	37416-37448	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	NC_048717	Paenibacillus phage Eltigre, complete genome	36034-36066	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	KF010834	Paenibacillus phage phiIBB_Pl23, complete genome	38598-38630	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	NC_048688	Paenibacillus phage BN12, complete genome	36847-36879	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	KT361650	Paenibacillus phage Willow, complete genome	35352-35384	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	NC_048718	Paenibacillus phage Jacopo, complete genome	35339-35371	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH454084	Paenibacillus phage Toothless, complete genome	36194-36226	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	KT361649	Paenibacillus phage Fern, complete genome	35353-35385	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	NC_048714	Paenibacillus phage Yerffej, complete genome	40485-40517	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	KP202972	Paenibacillus phage HB10c2, complete genome	33015-33047	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MG727702	Paenibacillus phage Likha, complete genome	34857-34889	0	1.0
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	NC_048690	Paenibacillus phage Pagassa, complete genome	37394-37426	0	1.0
NZ_CP019794_9	9.12\|4403300\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403300-4403332	33	NC_023147	Paenibacillus larvae subsp. larvae DSM 25430 plasmid pPLA2_10, complete sequence	4577-4609	0	1.0
NZ_CP019794_9	9.12\|4403300\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403300-4403332	33	NZ_CP019654	Paenibacillus larvae subsp. larvae DSM 25430 plasmid unnamed2, complete sequence	7640-7672	0	1.0
NZ_CP019794_9	9.18\|4403703\|34\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403703-4403736	34	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	21610-21643	0	1.0
NZ_CP019794_9	9.23\|4404036\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4404036-4404071	36	NZ_CP019718	Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence	37058-37093	0	1.0
NZ_CP019794_9	9.23\|4404036\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4404036-4404071	36	MK533143	Paenibacillus phage vB_PlaP_API480, complete genome	35356-35391	0	1.0
NZ_CP019794_10	10.1\|4404847\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	4404847-4404881	35	MH431930	Paenibacillus phage Wanderer, complete genome	30312-30346	0	1.0
NZ_CP019794_10	10.1\|4404847\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	4404847-4404881	35	MH454081	Paenibacillus phage LincolnB, complete genome	30302-30336	0	1.0
NZ_CP019794_10	10.6\|4405178\|38\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	4405178-4405215	38	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	31939-31976	0	1.0
NZ_CP019794_10	10.7\|4405248\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	4405248-4405282	35	KP296792	Bacteriophage Lily, complete genome	28044-28078	0	1.0
NZ_CP019794_1	1.1\|63237\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63237-63269	33	MH431930	Paenibacillus phage Wanderer, complete genome	30369-30401	1	0.97
NZ_CP019794_1	1.1\|63237\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63237-63269	33	MH454081	Paenibacillus phage LincolnB, complete genome	30359-30391	1	0.97
NZ_CP019794_2	2.3\|77351\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77351-77386	36	MH431930	Paenibacillus phage Wanderer, complete genome	29077-29112	1	0.972
NZ_CP019794_2	2.3\|77351\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77351-77386	36	MH454081	Paenibacillus phage LincolnB, complete genome	29067-29102	1	0.972
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	MH431934	Paenibacillus phage Gryphonian, complete genome	37216-37269	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	MH454082	Paenibacillus phage Genki, complete genome	37215-37268	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	MG727701	Paenibacillus phage Leyra, complete genome	40951-41004	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	MH454077	Paenibacillus phage Bloom, complete genome	37194-37247	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	MH431933	Paenibacillus phage DevRi, complete genome	37195-37248	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	NC_048689	Paenibacillus phage PBL1c, complete genome	39313-39366	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	KP296795	Bacteriophage Shelly, complete genome	39827-39880	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	MH431932	Paenibacillus phage Arcticfreeze, complete genome	37193-37246	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	KT361652	Paenibacillus phage Xenia, complete genome	39824-39877	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	MH431936	Paenibacillus phage Kawika, complete genome	39351-39404	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	NC_048718	Paenibacillus phage Jacopo, complete genome	37201-37254	1	0.981
NZ_CP019794_3	3.1\|1346595\|54\|NZ_CP019794\|CRISPRCasFinder	1346595-1346648	54	MG727702	Paenibacillus phage Likha, complete genome	38453-38506	1	0.981
NZ_CP019794_8	8.22\|3998588\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998588-3998623	36	NZ_CP019718	Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence	27880-27915	1	0.972
NZ_CP019794_9	9.10\|4403163\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403163-4403198	36	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	9366-9401	1	0.972
NZ_CP019794_9	9.19\|4403769\|35\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403769-4403803	35	MH431936	Paenibacillus phage Kawika, complete genome	33733-33767	1	0.971
NZ_CP019794_9	9.23\|4404036\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4404036-4404071	36	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	55877-55912	1	0.972
NZ_CP019794_1	1.2\|63302\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63302-63336	35	MH431930	Paenibacillus phage Wanderer, complete genome	5369-5403	2	0.943
NZ_CP019794_1	1.2\|63302\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63302-63336	35	MG727697	Paenibacillus phage Dragolir, complete genome	5369-5403	2	0.943
NZ_CP019794_1	1.2\|63302\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63302-63336	35	MH454081	Paenibacillus phage LincolnB, complete genome	5369-5403	2	0.943
NZ_CP019794_8	8.11\|3997850\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3997850-3997885	36	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	37644-37679	2	0.944
NZ_CP019794_8	8.12\|3997918\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3997918-3997951	34	MH460826	Paenibacillus phage Heath, complete genome	36350-36383	2	0.941
NZ_CP019794_8	8.12\|3997918\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3997918-3997951	34	MH460825	Paenibacillus phage Scottie, complete genome	36780-36813	2	0.941
NZ_CP019794_8	8.12\|3997918\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3997918-3997951	34	MH460827	Paenibacillus phage Halcyone, complete genome	36350-36383	2	0.941
NZ_CP019794_8	8.18\|3998320\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998320-3998353	34	NZ_CP020329	Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence	26131-26164	2	0.941
NZ_CP019794_8	8.18\|3998320\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998320-3998353	34	NZ_CP019796	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence	19759-19792	2	0.941
NZ_CP019794_8	8.18\|3998320\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998320-3998353	34	NZ_CP019661	Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence	20716-20749	2	0.941
NZ_CP019794_8	8.18\|3998320\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998320-3998353	34	NZ_CP019658	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence	20717-20750	2	0.941
NZ_CP019794_8	8.25\|3998794\|37\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998794-3998830	37	KT361655	Paenibacillus phage Hayley, complete genome	26955-26991	2	0.946
NZ_CP019794_8	8.25\|3998794\|37\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998794-3998830	37	KT361656	Paenibacillus phage Vadim, complete genome	28352-28388	2	0.946
NZ_CP019794_8	8.25\|3998794\|37\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998794-3998830	37	NC_028767	Paenibacillus phage Vegas, complete genome	28352-28388	2	0.946
NZ_CP019794_8	8.25\|3998794\|37\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998794-3998830	37	KT361657	Paenibacillus phage Diane, complete genome	28352-28388	2	0.946
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	MH431936	Paenibacillus phage Kawika, complete genome	37072-37104	2	0.939
NZ_CP019794_9	9.10\|4403163\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403163-4403198	36	MH431937	Paenibacillus phage Lucielle, complete genome	33110-33145	2	0.944
NZ_CP019794_9	9.10\|4403163\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403163-4403198	36	MH454083	Paenibacillus phage Saudage, complete genome	33125-33160	2	0.944
NZ_CP019794_9	9.10\|4403163\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403163-4403198	36	NC_048689	Paenibacillus phage PBL1c, complete genome	33097-33132	2	0.944
NZ_CP019794_9	9.10\|4403163\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403163-4403198	36	KT361650	Paenibacillus phage Willow, complete genome	33156-33191	2	0.944
NZ_CP019794_9	9.10\|4403163\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403163-4403198	36	KT361649	Paenibacillus phage Fern, complete genome	33157-33192	2	0.944
NZ_CP019794_1	1.3\|63369\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63369-63404	36	MH454080	Paenibacillus phage Ley, complete genome	36872-36907	3	0.917
NZ_CP019794_1	1.3\|63369\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63369-63404	36	MH454076	Paenibacillus phage Ash, complete genome	36872-36907	3	0.917
NZ_CP019794_1	1.3\|63369\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63369-63404	36	MH431938	Paenibacillus phage C7Cdelta, complete genome	36823-36858	3	0.917
NZ_CP019794_1	1.3\|63369\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63369-63404	36	KT755656	Paenibacillus phage Tripp, complete genome	37811-37846	3	0.917
NZ_CP019794_1	1.15\|64177\|32\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	64177-64208	32	MH460825	Paenibacillus phage Scottie, complete genome	19723-19754	3	0.906
NZ_CP019794_8	8.19\|3998386\|37\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998386-3998422	37	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	64947-64983	3	0.919
NZ_CP019794_9	9.7\|4402961\|33\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4402961-4402993	33	CP019719	Paenibacillus phage phiERICV, complete genome	13992-14024	3	0.909
NZ_CP019794_9	9.16\|4403565\|35\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403565-4403599	35	MH460825	Paenibacillus phage Scottie, complete genome	19033-19067	3	0.914
NZ_CP019794_9	9.19\|4403769\|35\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4403769-4403803	35	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	55797-55831	3	0.914
NZ_CP019794_9	9.23\|4404036\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4404036-4404071	36	KT361653	Paenibacillus phage Paisley, complete genome	40746-40781	3	0.917
NZ_CP019794_9	9.23\|4404036\|36\|NZ_CP019794\|CRISPRCasFinder,CRT,PILER-CR	4404036-4404071	36	NC_028746	Paenibacillus phage Harrison, complete genome	40823-40858	3	0.917
NZ_CP019794_8	8.17\|3998255\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	3998255-3998287	33	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	123252-123284	7	0.788
NZ_CP019794_1	1.1\|63237\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63237-63269	33	MT900488	Streptococcus phage SA01, complete genome	966-998	8	0.758
NZ_CP019794_1	1.7\|63636\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63636-63669	34	KJ019069	Synechococcus phage ACG-2014j isolate Syn7803US103, complete genome	53483-53516	8	0.765
NZ_CP019794_1	1.7\|63636\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63636-63669	34	NC_031900	Synechococcus phage S-CAM4 isolate 0809SB33, complete genome	53483-53516	8	0.765
NZ_CP019794_1	1.7\|63636\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63636-63669	34	KJ019156	Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome	58387-58420	8	0.765
NZ_CP019794_1	1.7\|63636\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63636-63669	34	KJ019054	Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome	58482-58515	8	0.765
NZ_CP019794_1	1.7\|63636\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63636-63669	34	KU686202	Synechococcus phage S-CAM4 isolate 1010NB23, complete genome	53544-53577	8	0.765
NZ_CP019794_1	1.7\|63636\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63636-63669	34	KU686200	Synechococcus phage S-CAM4 isolate 0309CC44, complete genome	53477-53510	8	0.765
NZ_CP019794_1	1.7\|63636\|34\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63636-63669	34	KJ019089	Synechococcus phage ACG-2014j isolate Syn7803US23, complete genome	58938-58971	8	0.765
NZ_CP019794_2	2.10\|77834\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77834-77866	33	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	90443-90475	8	0.758
NZ_CP019794_2	2.10\|77834\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77834-77866	33	NZ_CP030176	Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence	4286-4318	8	0.758
NZ_CP019794_1	1.4\|63437\|33\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63437-63469	33	NZ_CP054057	Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence	141217-141249	9	0.727
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	MG727696	Paenibacillus phage Kiel007, complete genome	33490-33525	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	KP296793	Bacteriophage Rani, complete genome	33494-33529	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	KP296794	Bacteriophage Redbud, complete genome	33476-33511	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	MG727700	Paenibacillus phage Tadhana, complete genome	33388-33423	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	NC_028788	Bacteriophage Diva, complete genome	32751-32786	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	MH431935	Paenibacillus phage Honeybear, complete genome	35562-35597	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	NC_048688	Paenibacillus phage BN12, complete genome	34993-35028	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	KP296796	Bacteriophage Sitara, complete genome	37668-37703	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	MH454084	Paenibacillus phage Toothless, complete genome	34340-34375	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	KP202972	Paenibacillus phage HB10c2, complete genome	31161-31196	9	0.75
NZ_CP019794_1	1.8\|63702\|36\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	63702-63737	36	NC_048690	Paenibacillus phage Pagassa, complete genome	35540-35575	9	0.75
NZ_CP019794_2	2.1\|77216\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77216-77250	35	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	114336-114370	9	0.743
NZ_CP019794_2	2.1\|77216\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77216-77250	35	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	114564-114598	9	0.743
NZ_CP019794_2	2.1\|77216\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77216-77250	35	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	31142-31176	10	0.714
NZ_CP019794_2	2.1\|77216\|35\|NZ_CP019794\|PILER-CR,CRISPRCasFinder,CRT	77216-77250	35	KU160495	Exiguobacterium phage vB_EauS-123, complete genome	30779-30813	10	0.714
NZ_CP019794_9	9.4\|4402762\|35\|NZ_CP019794\|CRISPRCasFinder,CRT	4402762-4402796	35	NC_013793	Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence	58032-58066	12	0.657

1. spacer 1.12|63973|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KT361653 (Paenibacillus phage Paisley, complete genome) position: , mismatch: 0, identity: 1.0

aatcaattcagatttagagtgaaataggtcctcaa	CRISPR spacer
aatcaattcagatttagagtgaaataggtcctcaa	Protospacer
***********************************

2. spacer 1.12|63973|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NC_028746 (Paenibacillus phage Harrison, complete genome) position: , mismatch: 0, identity: 1.0

aatcaattcagatttagagtgaaataggtcctcaa	CRISPR spacer
aatcaattcagatttagagtgaaataggtcctcaa	Protospacer
***********************************

3. spacer 2.6|77560|38|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

tattatttgcgtcaaagcagcatgtaactcttcggccc	CRISPR spacer
tattatttgcgtcaaagcagcatgtaactcttcggccc	Protospacer
**************************************

4. spacer 2.6|77560|38|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

tattatttgcgtcaaagcagcatgtaactcttcggccc	CRISPR spacer
tattatttgcgtcaaagcagcatgtaactcttcggccc	Protospacer
**************************************

5. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to KP296792 (Bacteriophage Lily, complete genome) position: , mismatch: 0, identity: 1.0

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	Protospacer
******************************************************

6. spacer 8.4|3997376|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

gagagattctacccgttttacttccgacagcttttc	CRISPR spacer
gagagattctacccgttttacttccgacagcttttc	Protospacer
************************************

7. spacer 8.4|3997376|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MG727697 (Paenibacillus phage Dragolir, complete genome) position: , mismatch: 0, identity: 1.0

gagagattctacccgttttacttccgacagcttttc	CRISPR spacer
gagagattctacccgttttacttccgacagcttttc	Protospacer
************************************

8. spacer 8.4|3997376|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

gagagattctacccgttttacttccgacagcttttc	CRISPR spacer
gagagattctacccgttttacttccgacagcttttc	Protospacer
************************************

9. spacer 8.17|3998255|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020329 (Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

10. spacer 8.17|3998255|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019796 (Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

11. spacer 8.17|3998255|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019661 (Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

12. spacer 8.17|3998255|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019658 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

13. spacer 8.25|3998794|37|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
atccggtgcatcagagattggctcaactgtatttcaa	Protospacer
*************************************

14. spacer 8.25|3998794|37|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
atccggtgcatcagagattggctcaactgtatttcaa	Protospacer
*************************************

15. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH431934 (Paenibacillus phage Gryphonian, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

16. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MG727696 (Paenibacillus phage Kiel007, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

17. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH454082 (Paenibacillus phage Genki, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

18. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KP296793 (Bacteriophage Rani, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

19. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MG727701 (Paenibacillus phage Leyra, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

20. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH431937 (Paenibacillus phage Lucielle, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

21. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH454077 (Paenibacillus phage Bloom, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

22. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH454083 (Paenibacillus phage Saudage, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

23. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KP296794 (Bacteriophage Redbud, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

24. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH431933 (Paenibacillus phage DevRi, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

25. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

26. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MG727700 (Paenibacillus phage Tadhana, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

27. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KP296795 (Bacteriophage Shelly, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

28. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_028788 (Bacteriophage Diva, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

29. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH431932 (Paenibacillus phage Arcticfreeze, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

30. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KT361652 (Paenibacillus phage Xenia, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

31. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH431935 (Paenibacillus phage Honeybear, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

32. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_048717 (Paenibacillus phage Eltigre, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

33. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KF010834 (Paenibacillus phage phiIBB_Pl23, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

34. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_048688 (Paenibacillus phage BN12, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

35. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KT361650 (Paenibacillus phage Willow, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

36. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_048718 (Paenibacillus phage Jacopo, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

37. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH454084 (Paenibacillus phage Toothless, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

38. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KT361649 (Paenibacillus phage Fern, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

39. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_048714 (Paenibacillus phage Yerffej, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

40. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KP202972 (Paenibacillus phage HB10c2, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

41. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MG727702 (Paenibacillus phage Likha, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

42. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_048690 (Paenibacillus phage Pagassa, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

43. spacer 9.12|4403300|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_023147 (Paenibacillus larvae subsp. larvae DSM 25430 plasmid pPLA2_10, complete sequence) position: , mismatch: 0, identity: 1.0

atcttgattaagatacaaactatcaattgtgta	CRISPR spacer
atcttgattaagatacaaactatcaattgtgta	Protospacer
*********************************

44. spacer 9.12|4403300|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019654 (Paenibacillus larvae subsp. larvae DSM 25430 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

atcttgattaagatacaaactatcaattgtgta	CRISPR spacer
atcttgattaagatacaaactatcaattgtgta	Protospacer
*********************************

45. spacer 9.18|4403703|34|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

atacggcaatgaatatgggcctcaacaagttcta	CRISPR spacer
atacggcaatgaatatgggcctcaacaagttcta	Protospacer
**********************************

46. spacer 9.23|4404036|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019718 (Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaaatagacgaataaagg	Protospacer
************************************

47. spacer 9.23|4404036|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MK533143 (Paenibacillus phage vB_PlaP_API480, complete genome) position: , mismatch: 0, identity: 1.0

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaaatagacgaataaagg	Protospacer
************************************

48. spacer 10.1|4404847|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

cagaagtaccccttgggacatatgatgtgaagatt	CRISPR spacer
cagaagtaccccttgggacatatgatgtgaagatt	Protospacer
***********************************

49. spacer 10.1|4404847|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

cagaagtaccccttgggacatatgatgtgaagatt	CRISPR spacer
cagaagtaccccttgggacatatgatgtgaagatt	Protospacer
***********************************

50. spacer 10.6|4405178|38|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtcaatatgggatcgataaatttggagcgaattgataa	CRISPR spacer
gtcaatatgggatcgataaatttggagcgaattgataa	Protospacer
**************************************

51. spacer 10.7|4405248|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KP296792 (Bacteriophage Lily, complete genome) position: , mismatch: 0, identity: 1.0

gaatttgtaaaagttctacaagatgaagatattac	CRISPR spacer
gaatttgtaaaagttctacaagatgaagatattac	Protospacer
***********************************

52. spacer 1.1|63237|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 1, identity: 0.97

ccaagtctggtaaaccaatgttgacctgctgga	CRISPR spacer
ccaagtctggtaaaccaatgttgacttgctgga	Protospacer
*************************.*******

53. spacer 1.1|63237|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 1, identity: 0.97

ccaagtctggtaaaccaatgttgacctgctgga	CRISPR spacer
ccaagtctggtaaaccaatgttgacttgctgga	Protospacer
*************************.*******

54. spacer 2.3|77351|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 1, identity: 0.972

tggaattctattagcgaaatccagtcaacgagcatt	CRISPR spacer
tggaattctattagcgaaatccagtcaacgagcagt	Protospacer
********************************** *

55. spacer 2.3|77351|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 1, identity: 0.972

tggaattctattagcgaaatccagtcaacgagcatt	CRISPR spacer
tggaattctattagcgaaatccagtcaacgagcagt	Protospacer
********************************** *

56. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to MH431934 (Paenibacillus phage Gryphonian, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

57. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to MH454082 (Paenibacillus phage Genki, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

58. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to MG727701 (Paenibacillus phage Leyra, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

59. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to MH454077 (Paenibacillus phage Bloom, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

60. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to MH431933 (Paenibacillus phage DevRi, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

61. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

62. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to KP296795 (Bacteriophage Shelly, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

63. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to MH431932 (Paenibacillus phage Arcticfreeze, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

64. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to KT361652 (Paenibacillus phage Xenia, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

65. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

66. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to NC_048718 (Paenibacillus phage Jacopo, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

67. spacer 3.1|1346595|54|NZ_CP019794|CRISPRCasFinder matches to MG727702 (Paenibacillus phage Likha, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

68. spacer 8.22|3998588|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019718 (Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

taattcaagtgatacgaccatagccgcattgatgta	CRISPR spacer
taattcaagtgatacgaccatagccgcattgatata	Protospacer
*********************************.**

69. spacer 9.10|4403163|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgcaattgattaacatgtttgat	Protospacer
***************.********************

70. spacer 9.19|4403769|35|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 1, identity: 0.971

gctgaactcgatatccatatctggagataactctt	CRISPR spacer
gctgaactcaatatccatatctggagataactctt	Protospacer
*********.*************************

71. spacer 9.23|4404036|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 1, identity: 0.972

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaagtagacgaataaagg	Protospacer
*********************.**************

72. spacer 1.2|63302|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 2, identity: 0.943

ggacaactggacatatcaaaatgattgtagaattg	CRISPR spacer
ggacaactggacctatcaaaatgattgtagaatta	Protospacer
************ *********************.

73. spacer 1.2|63302|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MG727697 (Paenibacillus phage Dragolir, complete genome) position: , mismatch: 2, identity: 0.943

ggacaactggacatatcaaaatgattgtagaattg	CRISPR spacer
ggacaactggacctatcaaaatgattgtagaatta	Protospacer
************ *********************.

74. spacer 1.2|63302|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 2, identity: 0.943

ggacaactggacatatcaaaatgattgtagaattg	CRISPR spacer
ggacaactggacctatcaaaatgattgtagaatta	Protospacer
************ *********************.

75. spacer 8.11|3997850|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.944

ttttaatatcgcattgcctaatcgcgttttaagatc	CRISPR spacer
ttttaaaatcgcatttcctaatcgcgttttaagatc	Protospacer
****** ******** ********************

76. spacer 8.12|3997918|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH460826 (Paenibacillus phage Heath, complete genome) position: , mismatch: 2, identity: 0.941

tcaagctcggcgacctcggctctgcgttggtcta	CRISPR spacer
tcaagctcggtgacctcggctttgcgttggtcta	Protospacer
**********.**********.************

77. spacer 8.12|3997918|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH460825 (Paenibacillus phage Scottie, complete genome) position: , mismatch: 2, identity: 0.941

tcaagctcggcgacctcggctctgcgttggtcta	CRISPR spacer
tcaagctcggtgacctcggctttgcgttggtcta	Protospacer
**********.**********.************

78. spacer 8.12|3997918|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH460827 (Paenibacillus phage Halcyone, complete genome) position: , mismatch: 2, identity: 0.941

tcaagctcggcgacctcggctctgcgttggtcta	CRISPR spacer
tcaagctcggtgacctcggctttgcgttggtcta	Protospacer
**********.**********.************

79. spacer 8.18|3998320|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020329 (Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

80. spacer 8.18|3998320|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019796 (Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

81. spacer 8.18|3998320|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019661 (Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

82. spacer 8.18|3998320|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019658 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

83. spacer 8.25|3998794|37|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KT361655 (Paenibacillus phage Hayley, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

84. spacer 8.25|3998794|37|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KT361656 (Paenibacillus phage Vadim, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

85. spacer 8.25|3998794|37|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NC_028767 (Paenibacillus phage Vegas, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

86. spacer 8.25|3998794|37|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KT361657 (Paenibacillus phage Diane, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

87. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 2, identity: 0.939

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
gcttccttttcttcaaaggtgaccgttttgaaa	Protospacer
.****.***************************

88. spacer 9.10|4403163|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH431937 (Paenibacillus phage Lucielle, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

89. spacer 9.10|4403163|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH454083 (Paenibacillus phage Saudage, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

90. spacer 9.10|4403163|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

91. spacer 9.10|4403163|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KT361650 (Paenibacillus phage Willow, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

92. spacer 9.10|4403163|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KT361649 (Paenibacillus phage Fern, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

93. spacer 1.3|63369|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454080 (Paenibacillus phage Ley, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

94. spacer 1.3|63369|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454076 (Paenibacillus phage Ash, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

95. spacer 1.3|63369|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH431938 (Paenibacillus phage C7Cdelta, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

96. spacer 1.3|63369|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KT755656 (Paenibacillus phage Tripp, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

97. spacer 1.15|64177|32|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH460825 (Paenibacillus phage Scottie, complete genome) position: , mismatch: 3, identity: 0.906

taaaaaacgagatgccaacgggtcgcccggat	CRISPR spacer
ctaaaaacgagctgccaacgggtcgcccggat	Protospacer
. ********* ********************

98. spacer 8.19|3998386|37|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 3, identity: 0.919

tcgaagtaatcacttccagcccgggatatctttaggc	CRISPR spacer
ttgaagtaattactgccagcccgggatatctttaggc	Protospacer
*.********.*** **********************

99. spacer 9.7|4402961|33|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to CP019719 (Paenibacillus phage phiERICV, complete genome) position: , mismatch: 3, identity: 0.909

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
gcttctttttcctcaaaggtgatcgttttgaaa	Protospacer
.**********.**********.**********

100. spacer 9.16|4403565|35|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to MH460825 (Paenibacillus phage Scottie, complete genome) position: , mismatch: 3, identity: 0.914

attttaattttccgttcccctcgtgttgttatcgt	CRISPR spacer
tttttaattttccgttcccctcgtgttgttatcta	Protospacer
 ********************************

101. spacer 9.19|4403769|35|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 3, identity: 0.914

gctgaactcgatatccatatctggagataactctt	CRISPR spacer
actgaactcaatatccatatctggtgataactctt	Protospacer
.********.************** **********

102. spacer 9.23|4404036|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to KT361653 (Paenibacillus phage Paisley, complete genome) position: , mismatch: 3, identity: 0.917

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaagtagacgaataagga	Protospacer
*********************.***********.*.

103. spacer 9.23|4404036|36|NZ_CP019794|CRISPRCasFinder,CRT,PILER-CR matches to NC_028746 (Paenibacillus phage Harrison, complete genome) position: , mismatch: 3, identity: 0.917

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaagtagacgaataagga	Protospacer
*********************.***********.*.

104. spacer 8.17|3998255|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 7, identity: 0.788

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
tttaatggaaaacaaagagaattataaagaaca	Protospacer
 .********************.*** *  * *

105. spacer 1.1|63237|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MT900488 (Streptococcus phage SA01, complete genome) position: , mismatch: 8, identity: 0.758

ccaagtctggtaaaccaatgttgacctgctgga	CRISPR spacer
ctaagtctggtaaacctatgatgaccagtacta	Protospacer
*.************** *** ***** *.   *

106. spacer 1.7|63636|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KJ019069 (Synechococcus phage ACG-2014j isolate Syn7803US103, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

107. spacer 1.7|63636|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NC_031900 (Synechococcus phage S-CAM4 isolate 0809SB33, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattgaaga	Protospacer
*********.************ ***..   *.*

108. spacer 1.7|63636|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KJ019156 (Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattgaaga	Protospacer
*********.************ ***..   *.*

109. spacer 1.7|63636|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KJ019054 (Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattgaaga	Protospacer
*********.************ ***..   *.*

110. spacer 1.7|63636|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KU686202 (Synechococcus phage S-CAM4 isolate 1010NB23, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

111. spacer 1.7|63636|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KU686200 (Synechococcus phage S-CAM4 isolate 0309CC44, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

112. spacer 1.7|63636|34|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KJ019089 (Synechococcus phage ACG-2014j isolate Syn7803US23, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

113. spacer 2.10|77834|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 8, identity: 0.758

gaaaaacaaatacaaaaataattacaccaagaa	CRISPR spacer
gcccatcaaatacaataataattacagcaatta	Protospacer
*   * ********* ********** ***  *

114. spacer 2.10|77834|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030176 (Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence) position: , mismatch: 8, identity: 0.758

gaaaaacaaatacaaaaataattacaccaagaa	CRISPR spacer
tcaagacaaatacaaaaataataacattagcaa	Protospacer
  **.***************** ***..*. **

115. spacer 1.4|63437|33|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 9, identity: 0.727

agacggtacgttaatcgtaccaatgacaaggag	CRISPR spacer
acagacaacgttaatcgttccaatgccaaggtt	Protospacer
* * .  *********** ****** *****

116. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MG727696 (Paenibacillus phage Kiel007, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

117. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KP296793 (Bacteriophage Rani, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

118. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KP296794 (Bacteriophage Redbud, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

119. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MG727700 (Paenibacillus phage Tadhana, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

120. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NC_028788 (Bacteriophage Diva, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

121. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH431935 (Paenibacillus phage Honeybear, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

122. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NC_048688 (Paenibacillus phage BN12, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

123. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KP296796 (Bacteriophage Sitara, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

124. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to MH454084 (Paenibacillus phage Toothless, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

125. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KP202972 (Paenibacillus phage HB10c2, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

126. spacer 1.8|63702|36|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NC_048690 (Paenibacillus phage Pagassa, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

127. spacer 2.1|77216|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 9, identity: 0.743

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
tggagataattcttttaattcttttagtatatctg	Protospacer
 .**  *  ** ************* ********

128. spacer 2.1|77216|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 9, identity: 0.743

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
tggagataattcttttaattcttttagtatatctg	Protospacer
 .**  *  ** ************* ********

129. spacer 2.1|77216|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 10, identity: 0.714

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
tgcggcgatttgttttaattctttttgttcatcgt	Protospacer
 . . *  ******************** .*** *

130. spacer 2.1|77216|35|NZ_CP019794|PILER-CR,CRISPRCasFinder,CRT matches to KU160495 (Exiguobacterium phage vB_EauS-123, complete genome) position: , mismatch: 10, identity: 0.714

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
caaatccttttgttttaaatctttttgtttcctca	Protospacer
 *.***.*********** ********* * ...

131. spacer 9.4|4402762|35|NZ_CP019794|CRISPRCasFinder,CRT matches to NC_013793 (Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence) position: , mismatch: 12, identity: 0.657

tcaacataattttgttttctaattaaaagtaaatc	CRISPR spacer
catacctaattatgttttctaattaaaatccgcgt	Protospacer
.  ** ***** **************** . .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1405 : 97281

112

Paenibacillus_phage(88.41%)

terminase,transposase,holin,tail,integrase,portal,protease,capsid

attL 18545:18563|attR 111587:111605

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_188318588.1\|1405_1966_-	helix-turn-helix domain-containing protein	A0A2I7SCV6	Paenibacillus_phage	2.2e-31	46.2
WP_077995163.1\|2175_2364_+	helix-turn-helix transcriptional regulator	A0A2H4J3K6	uncultured_Caudovirales_phage	5.2e-09	45.0
WP_149867650.1\|2428_2812_+	excisionase family DNA-binding protein	A0A0C5AN65	Paenibacillus_phage	9.8e-23	76.5
WP_077995164.1\|2829_3093_+	hypothetical protein	A0A0N9SSV8	Paenibacillus_phage	4.0e-07	61.0
WP_077995165.1\|3498_3807_+	hypothetical protein	A0A0N9RZD8	Paenibacillus_phage	2.7e-23	84.5
WP_077995166.1\|3791_4136_+	hypothetical protein	A0A0N9RZD8	Paenibacillus_phage	9.3e-65	98.2
WP_155121100.1\|4948_5125_+	hypothetical protein	NA	NA	NA	NA
WP_077995167.1\|5291_5594_+	hypothetical protein	A0A0N9S7X2	Paenibacillus_phage	3.5e-47	96.0
WP_077995168.1\|5609_5936_+	helix-turn-helix domain-containing protein	A0A0N7GFE9	Paenibacillus_phage	6.6e-52	94.4
WP_149867651.1\|6071_6563_+	hypothetical protein	A0A0N9SJV6	Paenibacillus_phage	1.3e-19	44.4
WP_077995170.1\|6620_6809_+	hypothetical protein	A0A0N9SHL8	Paenibacillus_phage	9.7e-16	83.7
WP_040932746.1\|6974_7352_+	hypothetical protein	A0A0N9SSX1	Paenibacillus_phage	1.9e-55	84.8
WP_040932748.1\|7370_7637_+	hypothetical protein	A0A0N9RRC8	Paenibacillus_phage	3.7e-37	84.1
WP_077995171.1\|7644_8415_+	DNA replication protein	A0A0N7GFF0	Paenibacillus_phage	2.5e-142	94.9
WP_077995172.1\|8411_9788_+	AAA family ATPase	A0A0N9SIP5	Paenibacillus_phage	2.3e-223	84.5
WP_077995173.1\|9800_10196_+	hypothetical protein	A0A0N9S7Y2	Paenibacillus_phage	7.5e-50	82.6
WP_077995174.1\|10231_10750_+	toprim domain-containing protein	A0A0N9S7Y2	Paenibacillus_phage	1.9e-77	83.1
WP_077995175.1\|10809_11388_+	hypothetical protein	A0A0N9SGJ9	Paenibacillus_phage	7.6e-51	55.2
WP_158676623.1\|11441_11981_+	hypothetical protein	A0A0N9RTM1	Paenibacillus_phage	1.1e-80	93.7
WP_077995177.1\|12065_12788_+	hypothetical protein	A0A0N9SJW5	Paenibacillus_phage	9.3e-123	90.2
WP_077995178.1\|12963_13305_+	hypothetical protein	A0A7H5	Microcystis_virus	4.7e-08	43.5
WP_077995179.1\|13449_13863_+	hypothetical protein	A0A0N9RZF9	Paenibacillus_phage	5.0e-73	96.4
WP_077995180.1\|14074_14263_+	hypothetical protein	A0A0N9SIQ5	Paenibacillus_phage	4.2e-11	71.7
WP_077995181.1\|14906_16466_+	DNA polymerase I	A0A0N9S7Z3	Paenibacillus_phage	6.8e-288	94.5
WP_149867652.1\|16434_16785_+	hypothetical protein	A0A0N9SGL0	Paenibacillus_phage	1.8e-31	60.7
WP_077995183.1\|16778_17906_+	hypothetical protein	A0A0N9RTM8	Paenibacillus_phage	4.6e-177	79.4
WP_077995184.1\|17906_18104_+	hypothetical protein	A0A0N7GFF2	Paenibacillus_phage	4.7e-29	95.4
WP_077995185.1\|18100_18715_+	3'-5' exonuclease	A0A0N9SJX9	Paenibacillus_phage	2.8e-104	96.1
18545:18563	attL	NA	NA	NA	NA
WP_077995186.1\|18699_19719_+	hypothetical protein	A0A0N9SHN6	Paenibacillus_phage	4.6e-136	81.1
WP_158672766.1\|19975_20227_+	crossover junction endodeoxyribonuclease RuvC	A0A0N9ST03	Paenibacillus_phage	3.2e-30	85.5
WP_077995188.1\|20223_20406_+	hypothetical protein	NA	NA	NA	NA
WP_077995189.1\|20371_22690_+	ribonucleoside-diphosphate reductase subunit alpha	A0A0Y0AS84	Bacillus_phage	1.3e-279	63.4
WP_077995190.1\|22703_23735_+	ribonucleotide-diphosphate reductase subunit beta	U5Q1G6	Bacillus_phage	1.9e-121	61.2
WP_077995191.1\|23746_24259_+	dUTP diphosphatase	D2XR49	Bacillus_phage	2.0e-39	53.8
WP_077995192.1\|24265_24562_+	hypothetical protein	NA	NA	NA	NA
WP_077995193.1\|24558_24897_+	hypothetical protein	NA	NA	NA	NA
WP_040930425.1\|24897_25224_+	hypothetical protein	NA	NA	NA	NA
WP_077995194.1\|25365_25566_+	hypothetical protein	A0A0N7GFF3	Paenibacillus_phage	1.1e-28	95.2
WP_077995195.1\|25562_25793_+	hypothetical protein	NA	NA	NA	NA
WP_077995196.1\|25794_26112_+	hypothetical protein	A0A0N9S804	Paenibacillus_phage	1.6e-50	87.6
WP_077995197.1\|26105_26576_+	DUF4065 domain-containing protein	A0A0N9SGM1	Paenibacillus_phage	3.2e-76	86.8
WP_077995198.1\|26572_26941_+	DUF5406 family protein	NA	NA	NA	NA
WP_077995199.1\|26984_28064_+	hypothetical protein	A0A0N9RTN7	Paenibacillus_phage	3.6e-62	51.7
WP_077995200.1\|28047_28806_+	AAA family ATPase	A0A0N9SJZ0	Paenibacillus_phage	6.2e-69	95.5
WP_188318589.1\|29025_29181_+	hypothetical protein	A0A0N9RZI0	Paenibacillus_phage	3.7e-05	88.5
WP_188318590.1\|29186_29432_+	DUF134 domain-containing protein	A0A0N9RZI0	Paenibacillus_phage	1.7e-28	82.7
WP_077995202.1\|29421_29874_+	hypothetical protein	A0A0N7GFF4	Paenibacillus_phage	4.5e-59	77.3
WP_077995204.1\|31097_31862_+	hypothetical protein	A0A0N9S810	Paenibacillus_phage	1.4e-140	97.6
WP_077995205.1\|32204_32399_+	hypothetical protein	A0A0N9RTP7	Paenibacillus_phage	1.4e-06	86.2
WP_077995206.1\|32420_32840_+	hypothetical protein	A0A0N9SJZ8	Paenibacillus_phage	4.8e-71	92.8
WP_077995207.1\|32829_33258_+	helix-turn-helix domain-containing protein	A0A0N7GFF5	Paenibacillus_phage	8.0e-66	99.2
WP_155121103.1\|34147_34312_+	hypothetical protein	NA	NA	NA	NA
WP_155121104.1\|34415_34592_+	hypothetical protein	A0A0N9SSS1	Paenibacillus_phage	2.2e-17	94.8
WP_077997491.1\|35368_37054_+\|terminase	phage terminase large subunit	A0A0N9RZA7	Paenibacillus_phage	5.8e-301	97.6
WP_077995210.1\|37077_38562_+\|portal	phage portal protein	A0A0N7GFE4	Paenibacillus_phage	5.7e-244	92.1
WP_077995211.1\|38558_39419_+\|capsid	minor capsid protein	A0A0N9SJR1	Paenibacillus_phage	1.6e-145	93.4
WP_077995212.1\|39510_39957_+	hypothetical protein	A0A0N9SIL0	Paenibacillus_phage	2.0e-30	73.8
WP_188318591.1\|39977_40145_+	hypothetical protein	A0A0N9SIL0	Paenibacillus_phage	2.4e-18	78.2
WP_077995214.1\|40200_41136_+	hypothetical protein	A0A0N9S7T7	Paenibacillus_phage	2.7e-167	94.9
WP_188318592.1\|41204_41663_+	hypothetical protein	A0A0N9SGG4	Paenibacillus_phage	1.6e-51	95.3
WP_077995216.1\|41862_42288_+	hypothetical protein	A0A0N9SJT1	Paenibacillus_phage	3.5e-69	92.2
WP_077995217.1\|42284_42659_+	hypothetical protein	A0A0N7GFE5	Paenibacillus_phage	4.7e-62	94.4
WP_077995218.1\|42671_43220_+	hypothetical protein	A0A0N9SHI3	Paenibacillus_phage	2.9e-92	95.1
WP_077995219.1\|43270_43507_+	hypothetical protein	A0A0N9SST2	Paenibacillus_phage	2.4e-27	91.3
WP_077995222.1\|45566_46040_+	hypothetical protein	NA	NA	NA	NA
WP_077995223.1\|46390_46933_+	hypothetical protein	A0A0N9SJR9	Paenibacillus_phage	1.3e-36	64.2
WP_077995224.1\|46913_48371_+\|tail	phage tail family protein	A0A0N9RRA9	Paenibacillus_phage	1.3e-277	94.8
WP_188318593.1\|48373_49183_+\|tail	phage tail protein	A0A0N9SIL8	Paenibacillus_phage	2.5e-140	96.4
WP_188318594.1\|49146_50547_+\|tail	phage tail protein	A0A0N9SIL8	Paenibacillus_phage	3.5e-259	96.8
WP_158672768.1\|50688_51126_+	hypothetical protein	A0A0N9S7V6	Paenibacillus_phage	1.1e-67	90.3
WP_077995228.1\|51113_51530_+\|holin	phage holin family protein	A0A0N7GFE6	Paenibacillus_phage	2.9e-68	97.1
WP_077995229.1\|51522_52392_+	N-acetylmuramoyl-L-alanine amidase	A0A0N9SGH1	Paenibacillus_phage	1.6e-161	95.2
WP_077995230.1\|52678_52972_-	hypothetical protein	NA	NA	NA	NA
WP_077995231.1\|53110_53323_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077995232.1\|53325_53709_+	hypothetical protein	NA	NA	NA	NA
WP_077995233.1\|53714_53951_+	hypothetical protein	NA	NA	NA	NA
WP_077995235.1\|55231_55411_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077995236.1\|55793_56144_-	hypothetical protein	A0A2I7SCF2	Paenibacillus_phage	4.6e-51	87.1
WP_040931863.1\|56188_56614_-	hypothetical protein	NA	NA	NA	NA
WP_077995237.1\|56778_57405_-	hypothetical protein	A0A0N9SJT2	Paenibacillus_phage	2.5e-39	62.4
WP_077995238.1\|58258_60163_+	type I-C CRISPR-associated protein Cas8c/Csd1	NA	NA	NA	NA
WP_077995239.1\|60177_61038_+	type I-C CRISPR-associated protein Cas7/Csd2	NA	NA	NA	NA
WP_077995240.1\|61027_61687_+	CRISPR-associated protein Cas4	NA	NA	NA	NA
WP_077995241.1\|61683_62715_+	type I-C CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_077995242.1\|62724_63015_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_149867654.1\|64593_64899_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077995244.1\|64902_65307_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_077997492.1\|65343_65472_+	hypothetical protein	NA	NA	NA	NA
WP_149867655.1\|65841_66429_-	hypothetical protein	NA	NA	NA	NA
WP_077995246.1\|66515_66893_-	hypothetical protein	NA	NA	NA	NA
WP_077995247.1\|67074_67557_-	hypothetical protein	NA	NA	NA	NA
WP_077995248.1\|68168_68396_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.8e-08	50.0
WP_077995249.1\|68459_69680_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077995254.1\|74276_74648_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_077995256.1\|78202_78940_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_149867656.1\|80930_81134_+	hypothetical protein	NA	NA	NA	NA
WP_155116373.1\|81290_81443_+	hypothetical protein	NA	NA	NA	NA
WP_023484252.1\|85579_86071_+	DUF1641 domain-containing protein	NA	NA	NA	NA
WP_024094004.1\|87194_88148_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	1.4e-94	55.3
WP_024094005.1\|88137_89091_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_023484248.1\|89084_89843_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.7e-19	30.8
WP_077995258.1\|89934_90888_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_077995259.1\|91397_91655_+	YqkE family protein	NA	NA	NA	NA
WP_077995260.1\|91685_92825_+	lactonase family protein	NA	NA	NA	NA
WP_162544749.1\|93105_93261_+	hypothetical protein	NA	NA	NA	NA
WP_077995262.1\|93381_93696_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_077995263.1\|93854_94304_+	cysteine dioxygenase family protein	NA	NA	NA	NA
WP_036654303.1\|94485_95253_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_155121107.1\|95305_95461_+	hypothetical protein	NA	NA	NA	NA
WP_077995264.1\|95478_96144_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_077995265.1\|96289_96703_+	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA
WP_077995266.1\|96705_97281_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
111587:111605	attR	NA	NA	NA	NA

DBSCAN-SWA_2

359221 : 408525

Paenibacillus_phage(72.73%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932657.1\|359221_360091_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_077995374.1\|360148_360676_-	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|360872_362096_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077995376.1\|362409_362940_-	spore germination protein	NA	NA	NA	NA
WP_077995377.1\|363319_365779_-	penicillin acylase family protein	NA	NA	NA	NA
WP_077995379.1\|367747_369280_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_023484737.1\|370945_371773_+	metallophosphoesterase	NA	NA	NA	NA
WP_077995380.1\|372234_373779_-	gluconokinase	NA	NA	NA	NA
WP_024094123.1\|375284_375962_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_077995381.1\|378041_378353_-	DUF4870 domain-containing protein	A0A2H4J741	uncultured_Caudovirales_phage	1.4e-11	45.9
WP_077995382.1\|380322_380514_+	hypothetical protein	NA	NA	NA	NA
WP_036654509.1\|381147_381831_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|381851_382721_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077995383.1\|382895_383285_-	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_077995384.1\|383773_386329_-	RICIN domain-containing protein	A0A0K2CYN4	Paenibacillus_phage	1.9e-258	56.1
WP_077997499.1\|386582_387002_+	DUF4064 domain-containing protein	A0A0K2CZQ0	Paenibacillus_phage	5.7e-24	100.0
WP_077995386.1\|387293_387749_-	hypothetical protein	R9VWV6	Paenibacillus_phage	2.1e-16	35.4
WP_077995387.1\|387697_389926_-	RICIN domain-containing protein	A0A0K2CYN4	Paenibacillus_phage	3.4e-208	51.6
WP_077995388.1\|391475_392417_+	LCP family protein	NA	NA	NA	NA
WP_188318605.1\|393222_393444_-	helix-turn-helix transcriptional regulator	A0A2I7SC05	Paenibacillus_phage	4.1e-13	50.0
WP_077995389.1\|393583_393766_+	hypothetical protein	NA	NA	NA	NA
WP_077995390.1\|393898_394102_+	hypothetical protein	A0A0K2CZ26	Paenibacillus_phage	4.7e-24	94.7
WP_036654824.1\|394085_394358_+	hypothetical protein	A0A0C5AEQ9	Bacteriophage	3.9e-42	100.0
WP_077995391.1\|394361_394574_+	hypothetical protein	A0A2I7SC04	Paenibacillus_phage	1.3e-29	97.0
WP_077995392.1\|394924_395473_-	hypothetical protein	A0A0C5AEH5	Bacteriophage	9.9e-77	85.8
WP_036654509.1\|395715_396399_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|396419_397289_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077995393.1\|399132_399933_-	N-acetylmuramoyl-L-alanine amidase	A0A2I7SCE7	Paenibacillus_phage	3.1e-18	55.3
WP_077995394.1\|400796_403004_-	hypothetical protein	A0A142IG93	Bacillus_phage	2.6e-19	39.9
WP_077995395.1\|403343_403661_-	STAS-like domain-containing protein	J7KJ12	Streptococcus_phage	1.1e-11	46.2
WP_077995375.1\|403811_405035_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077995396.1\|405180_406965_-	RICIN domain-containing protein	Q38196	Clostridium_botulinum_phage	2.7e-06	30.3
WP_077995397.1\|407301_408525_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8

DBSCAN-SWA_3

411976 : 487518

Paenibacillus_phage(36.36%)

bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077995401.1\|411976_412249_-\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	4.5e-30	93.3
WP_077995402.1\|412452_413907_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-123	48.9
WP_077995403.1\|414049_415642_-	SagB family peptide dehydrogenase	NA	NA	NA	NA
WP_077997501.1\|415666_417508_-	TOMM precursor leader peptide-binding protein	NA	NA	NA	NA
WP_077995404.1\|419695_419962_-\|bacteriocin	heterocycloanthracin/sonorensin family bacteriocin	NA	NA	NA	NA
WP_083041350.1\|420338_420539_-	hypothetical protein	NA	NA	NA	NA
WP_077995405.1\|421776_423726_-	ABC transporter permease	NA	NA	NA	NA
WP_077997502.1\|424862_425144_-	RICIN domain-containing protein	NA	NA	NA	NA
WP_077995406.1\|425068_425425_-	hypothetical protein	NA	NA	NA	NA
WP_077995407.1\|425788_426115_+	hypothetical protein	NA	NA	NA	NA
WP_024094129.1\|426252_426459_+	hypothetical protein	NA	NA	NA	NA
WP_077995408.1\|429036_429465_-	cell wall hydrolase	NA	NA	NA	NA
WP_023484627.1\|429631_430021_-	DoxX family protein	NA	NA	NA	NA
WP_158672774.1\|431008_431386_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_051427815.1\|431844_432099_-	ABC transporter permease	NA	NA	NA	NA
WP_077995411.1\|432131_432653_-	hypothetical protein	NA	NA	NA	NA
WP_036654152.1\|433781_435191_+	MATE family efflux transporter	NA	NA	NA	NA
WP_077995412.1\|436375_436714_-	hypothetical protein	NA	NA	NA	NA
WP_040931545.1\|436714_436921_-	hypothetical protein	NA	NA	NA	NA
WP_036654150.1\|437313_438144_+	5'-nucleotidase, lipoprotein e(P4) family	NA	NA	NA	NA
WP_077995413.1\|438930_440298_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_077995414.1\|440492_441542_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-30	40.0
WP_077995415.1\|441535_441853_+	hypothetical protein	NA	NA	NA	NA
WP_104932705.1\|441791_442673_+	ABC transporter permease	NA	NA	NA	NA
WP_036656608.1\|443935_445270_-	magnesium transporter	NA	NA	NA	NA
WP_077995417.1\|445377_448026_-	magnesium-translocating P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	5.2e-38	24.8
WP_149867674.1\|449019_449358_+	hypothetical protein	NA	NA	NA	NA
WP_079940713.1\|449303_449732_+	hypothetical protein	NA	NA	NA	NA
WP_104932634.1\|451370_452240_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|452260_452944_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077995421.1\|453044_455345_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_077995422.1\|455930_457013_+	tyrosine recombinase XerS	A0A2R2ZGM9	Clostridioides_phage	6.7e-08	24.9
WP_149867815.1\|457074_458712_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	4.3e-59	31.9
WP_024094153.1\|458998_459802_-	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_024094155.1\|463220_463385_-	GapA-binding peptide SR1P	NA	NA	NA	NA
WP_077995423.1\|463673_464909_-	MFS transporter	NA	NA	NA	NA
WP_077995424.1\|465138_466668_-	fumarate hydratase	NA	NA	NA	NA
WP_158672775.1\|467624_467786_-	hypothetical protein	NA	NA	NA	NA
WP_023484599.1\|467807_469013_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_077995425.1\|469009_470245_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_077997503.1\|470407_470890_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_077995427.1\|472512_474156_-	sensor histidine kinase	NA	NA	NA	NA
WP_077995428.1\|475559_476837_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_158672776.1\|476993_477152_+\|transposase	transposase	NA	NA	NA	NA
WP_158672777.1\|477211_477343_+	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|478510_479734_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077995429.1\|479848_480181_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_077995430.1\|485461_485773_-	hypothetical protein	NA	NA	NA	NA
WP_077995431.1\|485712_486279_-	hypothetical protein	A0A2K9KZV5	Tupanvirus	1.6e-05	22.9
WP_077995432.1\|486239_486593_-	hypothetical protein	NA	NA	NA	NA
WP_077995433.1\|486529_486874_-	AMP-binding protein	A0A2K9KZV5	Tupanvirus	7.7e-19	42.0
WP_077995434.1\|487287_487518_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

566252 : 575294

Paenibacillus_phage(71.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_036654509.1\|566252_566936_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932657.1\|566956_567826_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_024094220.1\|568013_568202_-	MarR family transcriptional regulator	A0A2I7SCW2	Paenibacillus_phage	3.7e-23	93.0
WP_077995479.1\|568530_568863_+	DUF4064 domain-containing protein	NA	NA	NA	NA
WP_158672784.1\|569254_570496_-	hypothetical protein	A0A1V0E017	Clostridioides_phage	1.4e-06	25.6
WP_077995481.1\|570826_571756_-	ricin-type beta-trefoil lectin domain protein	A0A0K2CYN4	Paenibacillus_phage	1.0e-09	30.5
WP_077995397.1\|571926_573150_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
WP_077995482.1\|573170_575294_-	hypothetical protein	A0A1V0E026	Clostridioides_phage	8.3e-95	36.7

DBSCAN-SWA_5

668312 : 754574

Paenibacillus_phage(40.74%)

tRNA,transposase,protease,integrase

attL 718929:718988|attR 755288:757009

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932634.1\|668312_669182_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077995505.1\|669931_670696_-	hypothetical protein	NA	NA	NA	NA
WP_024094283.1\|670731_671643_-	protein kinase PKN/PRK1, effector,flagellar motor switch protein FliG-like protein	NA	NA	NA	NA
WP_024094287.1\|676999_677314_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_077995506.1\|677310_677784_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA
WP_036653997.1\|677787_678198_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA
WP_024094289.1\|678440_679226_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_036653992.1\|680823_681366_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_077997509.1\|681544_682873_-\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_023484649.1\|682885_684976_-	type I DNA topoisomerase	A0A2K9L5F8	Tupanvirus	1.8e-110	40.9
WP_077995507.1\|685123_686233_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	3.7e-38	40.4
WP_077995508.1\|686336_687272_-	succinate--CoA ligase subunit alpha	NA	NA	NA	NA
WP_077995509.1\|687328_688489_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_024094298.1\|688877_689138_-	hypothetical protein	NA	NA	NA	NA
WP_024094299.1\|689169_689565_-	hypothetical protein	NA	NA	NA	NA
WP_077997510.1\|689779_691303_+	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_024094301.1\|691399_691804_-	YraN family protein	NA	NA	NA	NA
WP_023484363.1\|691813_692146_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA
WP_077995510.1\|692142_692673_-	hypothetical protein	NA	NA	NA	NA
WP_077995511.1\|693127_693733_-	hypothetical protein	NA	NA	NA	NA
WP_077995512.1\|693771_693951_-	hypothetical protein	NA	NA	NA	NA
WP_077995513.1\|694980_695862_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_077995514.1\|695970_696555_-	signal peptidase I	NA	NA	NA	NA
WP_023484358.1\|696666_697008_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_077995515.1\|697898_698420_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_023484355.1\|698645_698876_-	KH domain-containing protein	NA	NA	NA	NA
WP_023484354.1\|698898_699171_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_023484353.1\|699212_700580_-	signal recognition particle protein	NA	NA	NA	NA
WP_024094307.1\|700609_700972_-	putative DNA-binding protein	NA	NA	NA	NA
WP_077995516.1\|701105_702113_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_023484350.1\|702197_705776_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_077997511.1\|705944_706646_-	ribonuclease III	A0A167RGU4	Powai_lake_megavirus	2.1e-26	29.6
WP_024094309.1\|706825_708061_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_024094310.1\|708150_708384_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	6.0e-07	38.0
WP_024094311.1\|708502_709243_-	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	5.0e-23	36.4
WP_023484345.1\|709342_710278_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_188318647.1\|710309_711287_-	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_024094313.1\|711306_712293_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_023484342.1\|712294_712888_-	transcription factor FapR	NA	NA	NA	NA
WP_023484341.1\|713060_713234_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_077995518.1\|713352_713865_-	DUF177 domain-containing protein	NA	NA	NA	NA
WP_036658730.1\|713952_715026_-	PDZ domain-containing protein	NA	NA	NA	NA
WP_023484339.1\|715210_716560_+	spore cortex formation factor-like protein	NA	NA	NA	NA
WP_023484338.1\|716570_717080_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.0e-26	39.5
WP_023484337.1\|717097_717655_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_024094320.1\|718203_718401_-	helix-turn-helix transcriptional regulator	D0R7I7	Paenibacillus_phage	2.4e-09	76.9
WP_024094321.1\|718465_718879_+	hypothetical protein	A0A0K2CYM1	Paenibacillus_phage	8.7e-33	98.6
718929:718988	attL	NA	NA	NA	NA
WP_036654509.1\|718997_719681_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|719701_720571_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_024094322.1\|720751_721141_-	hypothetical protein	NA	NA	NA	NA
WP_077995520.1\|721922_722060_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077995521.1\|722240_723494_-	lytic polysaccharide monooxygenase	A0A2D1GD28	Mycobacterium_phage	3.8e-07	29.3
WP_104932807.1\|724016_725061_+\|transposase	IS630 family transposase	A0A1V0SDF8	Indivirus	6.0e-06	20.9
WP_077995522.1\|725126_725369_-\|transposase	transposase	A0A2I7SCT4	Paenibacillus_phage	8.6e-33	98.8
WP_077585229.1\|725378_726047_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A0K2CXQ8	Paenibacillus_phage	4.0e-128	95.9
WP_024094328.1\|726046_726286_-	hypothetical protein	A0A0C5AEG8	Bacteriophage	2.8e-36	100.0
WP_077995523.1\|726698_727010_+\|transposase	transposase	NA	NA	NA	NA
WP_149867687.1\|727060_727480_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_149867688.1\|727455_727914_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2I6AZV9	Macacine_betaherpesvirus	5.1e-10	29.1
WP_077995527.1\|729256_729607_-	YxeA family protein	A0A0K2CYS5	Paenibacillus_phage	5.8e-30	60.9
WP_158672787.1\|729863_730154_-	hypothetical protein	A0A0C5AFG5	Paenibacillus_phage	6.5e-35	79.8
WP_077995529.1\|730293_730809_+	DUF3231 family protein	NA	NA	NA	NA
WP_042119037.1\|730891_731095_-	hypothetical protein	A0A0S2SXP3	Bacillus_phage	6.8e-07	40.0
WP_158672788.1\|731690_731915_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158676629.1\|732178_732772_+	hypothetical protein	R9VW28	Paenibacillus_phage	4.0e-39	44.2
WP_158672789.1\|732791_733349_+\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	3.0e-28	40.4
WP_158672790.1\|733358_733574_+\|integrase	tyrosine-type recombinase/integrase	S5MNZ2	Brevibacillus_phage	3.3e-20	71.6
WP_024094341.1\|734593_734797_+	hypothetical protein	NA	NA	NA	NA
WP_024094342.1\|735033_735774_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
WP_023484789.1\|735924_737196_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_036658705.1\|737330_738662_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_077995534.1\|739071_739389_-	hypothetical protein	NA	NA	NA	NA
WP_077995535.1\|739390_739594_-	hypothetical protein	NA	NA	NA	NA
WP_023484786.1\|739820_740159_-	YolD-like family protein	NA	NA	NA	NA
WP_077995536.1\|740155_741403_-	DNA polymerase IV	NA	NA	NA	NA
WP_023484784.1\|741957_743013_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_023484783.1\|743041_743389_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024094350.1\|744051_744414_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024094351.1\|744623_746756_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.0e-164	44.6
WP_077995537.1\|746963_747218_+	hypothetical protein	W8CYF6	Bacillus_phage	1.5e-06	37.2
WP_077995538.1\|747296_748403_+	ABC transporter permease	NA	NA	NA	NA
WP_188318610.1\|748402_749086_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-35	39.0
WP_188318611.1\|750965_751154_-	hypothetical protein	NA	NA	NA	NA
WP_155121117.1\|751452_751614_+	hypothetical protein	NA	NA	NA	NA
WP_077995541.1\|752798_753446_+	arylamine N-acetyltransferase	NA	NA	NA	NA
WP_104932621.1\|753704_754574_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
755288:757009	attR	NA	NA	NA	NA

DBSCAN-SWA_6

890994 : 900339

Paenibacillus_phage(72.73%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932657.1\|890994_891864_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_036654509.1\|891884_892568_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077995599.1\|893024_893414_+	hypothetical protein	A0A0K2CZD8	Paenibacillus_phage	1.3e-06	50.7
WP_077995601.1\|894432_895077_+	hypothetical protein	NA	NA	NA	NA
WP_077995602.1\|895691_895895_+	hypothetical protein	A0A0K2CYF6	Paenibacillus_phage	5.8e-06	60.0
WP_024094463.1\|895963_896185_-	helix-turn-helix transcriptional regulator	A0A0E3U244	Fusobacterium_phage	3.8e-11	44.4
WP_077995603.1\|896283_896475_+	hypothetical protein	A0A2I7SC25	Paenibacillus_phage	4.4e-24	100.0
WP_155121024.1\|896478_896631_+	hypothetical protein	A0A2I7SC04	Paenibacillus_phage	2.3e-07	81.2
WP_077995604.1\|897232_897535_-	hypothetical protein	A0A2I7SC06	Paenibacillus_phage	3.7e-33	81.4
WP_077995605.1\|897941_898424_-	hypothetical protein	R9VWV6	Paenibacillus_phage	6.8e-05	31.7
WP_077995606.1\|899002_899185_+	hypothetical protein	NA	NA	NA	NA
WP_077995607.1\|899480_899891_+	helix-turn-helix transcriptional regulator	F8J1E0	Lactobacillus_phage	2.3e-09	39.8
WP_077995608.1\|899922_900339_+	ImmA/IrrE family metallo-endopeptidase	A0A2P1JU12	Anoxybacillus_phage	4.6e-18	37.0

DBSCAN-SWA_7

1223426 : 1381446

157

Bacteriophage(42.68%)

bacteriocin,transposase,terminase,head,tail,integrase,protease,portal,capsid

attL 1249557:1249571|attR 1307146:1307160

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077995752.1\|1223426_1223774_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_023482975.1\|1223789_1224101_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_188318620.1\|1224282_1224699_-	ribonuclease E/G	NA	NA	NA	NA
WP_023482973.1\|1225008_1225884_-	M50 family metallopeptidase	NA	NA	NA	NA
WP_077995754.1\|1225876_1226791_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_023482970.1\|1228103_1228898_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_023482969.1\|1228995_1229634_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_077995755.1\|1229703_1230234_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_024094764.1\|1232229_1232919_-	DNA repair protein RadC	NA	NA	NA	NA
WP_024094765.1\|1233403_1233835_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_077995756.1\|1233915_1234512_-	septum formation protein Maf	NA	NA	NA	NA
WP_077995757.1\|1234581_1234824_-	DUF4321 domain-containing protein	NA	NA	NA	NA
WP_077997528.1\|1235074_1236217_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	2.9e-22	35.5
WP_040932310.1\|1236317_1237130_-	hypothetical protein	NA	NA	NA	NA
WP_077995758.1\|1237147_1237606_-	hypothetical protein	NA	NA	NA	NA
WP_077995759.1\|1237728_1239117_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_023484266.1\|1239124_1240498_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_077995760.1\|1244026_1245178_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_188318621.1\|1245282_1246176_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_077997530.1\|1247858_1248815_-	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	1.2e-32	34.6
WP_077995761.1\|1248959_1250261_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
1249557:1249571	attL	NA	NA	NA	NA
WP_077995762.1\|1250323_1251763_-	protoporphyrinogen oxidase	NA	NA	NA	NA
WP_077995763.1\|1253993_1254989_-	porphobilinogen synthase	NA	NA	NA	NA
WP_077995764.1\|1256574_1257519_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_077995765.1\|1257567_1258305_-	bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase	NA	NA	NA	NA
WP_077995766.1\|1258301_1259144_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_023484282.1\|1260746_1261280_-	hypothetical protein	NA	NA	NA	NA
WP_077995767.1\|1261417_1261819_-	adenosylmethionine decarboxylase	A0A0E3FA82	Synechococcus_phage	1.5e-18	36.4
WP_023484284.1\|1262191_1262779_-	hypothetical protein	NA	NA	NA	NA
WP_077995768.1\|1263169_1263784_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_024094788.1\|1266284_1268003_-\|protease	ATP-dependent protease LonB	A0A0R6PGP8	Moraxella_phage	4.7e-16	24.7
WP_104932751.1\|1268218_1268926_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_077995769.1\|1268976_1270098_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
WP_077995770.1\|1270202_1271465_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.9e-149	65.0
WP_024094790.1\|1271480_1272071_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	4.2e-57	56.6
WP_104932752.1\|1272235_1273537_-	trigger factor	NA	NA	NA	NA
WP_046655164.1\|1273716_1274619_-	hypothetical protein	NA	NA	NA	NA
WP_188318622.1\|1274749_1275004_-	hypothetical protein	NA	NA	NA	NA
WP_077995772.1\|1274991_1275969_-	CapA family protein	A0A2H4JC87	uncultured_Caudovirales_phage	1.3e-42	35.0
WP_024094793.1\|1276195_1276309_-	DUF4023 family protein	NA	NA	NA	NA
WP_149867710.1\|1276363_1277584_-	PH domain-containing protein	NA	NA	NA	NA
WP_077995774.1\|1277586_1277868_-	hypothetical protein	NA	NA	NA	NA
WP_077995775.1\|1277860_1278337_-	PH domain-containing protein	NA	NA	NA	NA
WP_024094796.1\|1278503_1278857_-	hypothetical protein	NA	NA	NA	NA
WP_024094798.1\|1281673_1282429_-	ribonuclease PH	NA	NA	NA	NA
WP_077997532.1\|1284006_1284567_+	phosphatidylglycerophosphatase A	G3MBC5	Bacillus_virus	5.5e-38	53.6
WP_077995776.1\|1284632_1285442_+	MFS transporter	NA	NA	NA	NA
WP_104932621.1\|1285679_1286549_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|1286569_1287253_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932668.1\|1287505_1288622_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	4.6e-153	99.3
WP_077995777.1\|1288775_1289090_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_023485249.1\|1289089_1289431_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_024094809.1\|1289498_1290080_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_077995778.1\|1291319_1292054_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_077995780.1\|1294313_1294772_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_188318665.1\|1294898_1295447_-	hypothetical protein	NA	NA	NA	NA
WP_104932754.1\|1295377_1295572_-\|transposase	transposase	NA	NA	NA	NA
WP_149867711.1\|1296348_1299681_+	hypothetical protein	A0A126FC74	Lonomia_obliqua_multiple_nucleopolyhedrovirus	1.2e-34	25.5
WP_077995782.1\|1299753_1300323_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023483458.1\|1302145_1302352_+	cold-shock protein	Q9AZD3	Lactococcus_phage	4.6e-19	64.6
WP_023482516.1\|1303394_1304033_+	hemolysin III family protein	NA	NA	NA	NA
WP_077995375.1\|1305343_1306567_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077995783.1\|1307375_1308938_-	recombinase family protein	A0A0C5AJM7	Paenibacillus_phage	5.6e-290	98.5
1307146:1307160	attR	NA	NA	NA	NA
WP_144029589.1\|1308876_1309125_-	hypothetical protein	A0A0C5AF76	Paenibacillus_phage	9.8e-40	98.8
WP_077995784.1\|1309169_1309628_-	transcriptional regulator	A0A0C5AC66	Paenibacillus_phage	5.4e-76	96.7
WP_077995785.1\|1309678_1310137_-	hypothetical protein	A0A2I7SCC0	Paenibacillus_phage	2.7e-75	98.0
WP_077995786.1\|1310295_1310883_-	hypothetical protein	A0A0C5ABQ1	Bacteriophage	7.3e-102	94.3
WP_077995787.1\|1310879_1311092_-	hypothetical protein	R9VYB7	Paenibacillus_phage	8.3e-32	85.7
WP_077995788.1\|1311199_1311391_-	hypothetical protein	A0A0K2CZP1	Paenibacillus_phage	3.4e-16	80.0
WP_077995789.1\|1311440_1311806_-	helix-turn-helix transcriptional regulator	R9W020	Paenibacillus_phage	9.9e-57	95.8
WP_155116288.1\|1311852_1312002_-	hypothetical protein	R9W0Q6	Paenibacillus_phage	5.0e-23	100.0
WP_077995790.1\|1312016_1312322_-	hypothetical protein	A0A0C5AEC7	Paenibacillus_phage	4.9e-49	91.1
WP_077997534.1\|1312324_1313647_-	AAA family ATPase	A0A0K2CY23	Paenibacillus_phage	2.4e-246	98.6
WP_149867712.1\|1313612_1314281_-	hypothetical protein	A0A2I7SDJ4	Paenibacillus_phage	1.9e-122	98.6
WP_023483155.1\|1314462_1314777_-	hypothetical protein	A0A0C5AEL1	Paenibacillus_phage	2.0e-37	100.0
WP_077995791.1\|1314773_1315532_-	MBL fold metallo-hydrolase	A0A0B5A2C7	Paenibacillus_phage	1.5e-139	94.8
WP_077995792.1\|1315544_1316459_-	recombinase RecT	A0A0C5AEK7	Bacteriophage	8.9e-147	85.9
WP_077995793.1\|1316461_1316659_-	hypothetical protein	A0A0C5AN67	Paenibacillus_phage	8.0e-29	93.8
WP_077995794.1\|1316655_1318176_-	AAA family ATPase	A0A0C5AN14	Bacteriophage	8.5e-227	83.9
WP_077995795.1\|1318159_1318453_-	hypothetical protein	A0A0C5AJQ8	Paenibacillus_phage	3.8e-43	95.9
WP_077995796.1\|1318457_1318718_-	hypothetical protein	A0A0C5AN52	Paenibacillus_phage	5.5e-25	64.4
WP_077995797.1\|1318753_1319164_-	hypothetical protein	NA	NA	NA	NA
WP_077995798.1\|1319325_1319559_-	hypothetical protein	A0A0C5AN13	Bacteriophage	4.9e-33	88.3
WP_077995799.1\|1319555_1319798_-	hypothetical protein	A0A0C5AER7	Bacteriophage	2.0e-29	78.9
WP_155121051.1\|1319894_1320071_+	hypothetical protein	NA	NA	NA	NA
WP_077995800.1\|1320054_1320327_-	hypothetical protein	A0A0C5AEJ1	Bacteriophage	3.6e-43	95.5
WP_077995801.1\|1320353_1321094_-	Rha family transcriptional regulator	A0A2I7SDG8	Paenibacillus_phage	8.9e-129	97.2
WP_155121052.1\|1321122_1321266_-	hypothetical protein	A0A2I7SCU1	Paenibacillus_phage	2.7e-18	95.7
WP_077995803.1\|1321463_1321682_-	helix-turn-helix transcriptional regulator	A0A0C5AMZ9	Paenibacillus_phage	5.6e-31	95.7
WP_077995804.1\|1321899_1322346_+	helix-turn-helix transcriptional regulator	A0A0C5AN12	Bacteriophage	1.3e-71	96.6
WP_077995805.1\|1322918_1323122_+	YqaE/Pmp3 family membrane protein	A0A0C5AJ71	Bacteriophage	6.3e-29	100.0
WP_077995806.1\|1323218_1323449_-	helix-turn-helix transcriptional regulator	A0A0C5ABM0	Bacteriophage	3.0e-35	96.0
WP_077995807.1\|1323923_1324115_+	hypothetical protein	A0A0K2CZ26	Paenibacillus_phage	1.1e-25	96.6
WP_079940410.1\|1324380_1324587_+	hypothetical protein	A0A2I7SC04	Paenibacillus_phage	4.2e-28	89.7
WP_077995809.1\|1324678_1324921_-\|transposase	transposase	A0A0C5AEQ4	Bacteriophage	7.6e-29	96.2
WP_077997536.1\|1325173_1325845_-	N-acetylmuramoyl-L-alanine amidase	A0A2I7SC18	Paenibacillus_phage	6.8e-128	93.3
WP_077995810.1\|1325844_1326084_-\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	3.1e-35	96.2
WP_024094416.1\|1326119_1326278_-	hypothetical protein	NA	NA	NA	NA
WP_077995811.1\|1326270_1326666_-	hypothetical protein	NA	NA	NA	NA
WP_077995812.1\|1326678_1328463_-\|tail	phage tail protein	A0A0C5AEQ0	Bacteriophage	2.3e-69	90.6
WP_077995813.1\|1330141_1330468_-	GPW/gp25 family protein	A0A0C5ABJ8	Bacteriophage	7.3e-51	98.1
WP_077995814.1\|1330457_1330859_-\|tail	phage tail protein	A0A0C5AN08	Bacteriophage	1.0e-70	95.5
WP_077995815.1\|1330839_1331232_-	hypothetical protein	A0A0C5AEP6	Bacteriophage	9.4e-21	88.5
WP_077995816.1\|1331234_1332263_-	late control protein	A0A0C5AJ59	Bacteriophage	1.3e-186	91.8
WP_077995818.1\|1332465_1333743_-	hypothetical protein	A0A0C5ABJ2	Bacteriophage	6.5e-119	74.9
WP_077995820.1\|1334275_1334959_-	hypothetical protein	A0A0C5ABJ2	Bacteriophage	7.7e-95	91.2
WP_077995821.1\|1335118_1335454_-\|tail	phage tail assembly protein	A0A0C5AEP1	Bacteriophage	6.8e-44	85.0
WP_077995822.1\|1335481_1336000_-\|tail	phage major tail tube protein	A0A0C5AJ56	Bacteriophage	9.4e-85	94.8
WP_077995823.1\|1336012_1337455_-\|tail	phage tail protein	A0A0C5AEE8	Bacteriophage	3.5e-262	92.1
WP_077995824.1\|1337458_1337731_-	hypothetical protein	A0A0C5ABI6	Bacteriophage	1.4e-42	95.6
WP_077995825.1\|1337727_1338195_-	hypothetical protein	A0A0C5AN06	Bacteriophage	2.3e-82	97.4
WP_077995826.1\|1338191_1338743_-\|tail	phage tail protein	A0A0C5AEN6	Bacteriophage	3.1e-94	98.9
WP_077995827.1\|1338739_1339051_-	hypothetical protein	A0A0C5AJ53	Bacteriophage	4.8e-52	100.0
WP_155121053.1\|1339047_1339197_-	hypothetical protein	A0A0C5AEE3	Bacteriophage	3.0e-20	100.0
WP_077995828.1\|1339210_1340239_-\|capsid	major capsid protein	A0A0C5ABI0	Bacteriophage	1.7e-194	99.4
WP_077995829.1\|1340254_1340611_-\|head	head decoration protein	A0A0C5AN05	Bacteriophage	6.3e-56	97.5
WP_149867713.1\|1340607_1340970_-	hypothetical protein	A0A0C5AEN1	Bacteriophage	1.7e-56	100.0
WP_077995831.1\|1340978_1341728_-\|protease	Clp protease ClpP	A0A0C5AEN1	Bacteriophage	3.3e-131	96.7
WP_077995832.1\|1341687_1343247_-\|portal	phage portal protein	A0A0C5AJ48	Bacteriophage	9.2e-293	96.3
WP_077995833.1\|1343243_1343465_-	hypothetical protein	A0A0C5AEE0	Bacteriophage	1.8e-29	89.0
WP_077995834.1\|1343481_1345344_-\|terminase	phage terminase large subunit family protein	A0A0C5ABH4	Bacteriophage	0.0e+00	98.7
WP_077995835.1\|1345327_1345840_-	hypothetical protein	A0A0C5AN04	Bacteriophage	3.4e-71	84.0
WP_036654551.1\|1346987_1347191_+	type II toxin-antitoxin system HicA family toxin	A0A0C5AC70	Paenibacillus_phage	1.5e-33	100.0
WP_077995836.1\|1347221_1347632_+	type II toxin-antitoxin system HicB family antitoxin	A0A0C5AEN7	Bacteriophage	7.2e-72	98.5
WP_077995837.1\|1347660_1347864_-	hypothetical protein	A0A0C5ABQ7	Bacteriophage	5.2e-31	98.5
WP_024094814.1\|1348334_1349645_-	purine/pyrimidine permease	NA	NA	NA	NA
WP_077995839.1\|1349783_1350413_-	dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_036654509.1\|1350404_1351088_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|1351108_1351978_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077995840.1\|1352054_1352441_-	hypothetical protein	NA	NA	NA	NA
WP_077995841.1\|1352421_1353123_-	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA
WP_188318623.1\|1353350_1353455_-	sporulation protein YjcZ	NA	NA	NA	NA
WP_077997537.1\|1353538_1354066_+	hypothetical protein	NA	NA	NA	NA
WP_077995842.1\|1354149_1354986_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_104932757.1\|1354972_1355989_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_077997539.1\|1355993_1356770_-	glycosyltransferase	NA	NA	NA	NA
WP_077995843.1\|1356841_1357858_+	GDP-mannose 4,6-dehydratase	M4QPK0	Synechococcus_phage	2.3e-34	34.6
WP_077995844.1\|1357939_1358659_-	glycosyltransferase	K7Z8A5	Megavirus	2.1e-10	23.6
WP_023482889.1\|1358666_1359572_-	NAD-dependent epimerase/dehydratase family protein	A0A291LAD7	Escherichia_phage	1.2e-15	25.7
WP_077995845.1\|1359568_1360369_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_077995846.1\|1360394_1361381_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.6e-40	33.4
WP_077995847.1\|1362460_1363921_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_077995848.1\|1364194_1364566_-	hypothetical protein	NA	NA	NA	NA
WP_077995849.1\|1364565_1365702_-	glycosyltransferase	NA	NA	NA	NA
WP_077995850.1\|1365676_1366867_-	glycosyltransferase	NA	NA	NA	NA
WP_077995851.1\|1366863_1367586_-	NTP transferase domain-containing protein	G3MA50	Bacillus_virus	1.8e-46	40.9
WP_188318624.1\|1367840_1369460_-\|tail	WIAG-tail domain	NA	NA	NA	NA
WP_077995853.1\|1371195_1371408_-	hypothetical protein	NA	NA	NA	NA
WP_077995854.1\|1371404_1371932_-	hypothetical protein	NA	NA	NA	NA
WP_077995855.1\|1372108_1372486_-	hypothetical protein	NA	NA	NA	NA
WP_149867714.1\|1372516_1372879_+	hypothetical protein	NA	NA	NA	NA
WP_077995857.1\|1372946_1375514_-	hypothetical protein	NA	NA	NA	NA
WP_036654846.1\|1375641_1375980_-	L,D-transpeptidase	NA	NA	NA	NA
WP_023482876.1\|1377627_1378410_+	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_077995858.1\|1378966_1379569_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_077995859.1\|1379872_1380556_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.8e-123	99.6
WP_104932657.1\|1380576_1381446_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6

DBSCAN-SWA_8

1454914 : 1514348

Paenibacillus_phage(60.78%)

tRNA,transposase,terminase,holin,head,tail,integrase,portal,coat,capsid

attL 1473939:1473955|attR 1514356:1514372

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932657.1\|1454914_1455784_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_024094875.1\|1455932_1456613_-	LrgB family protein	NA	NA	NA	NA
WP_023483267.1\|1456609_1456981_-\|holin	CidA/LrgA family holin-like protein	NA	NA	NA	NA
WP_036654876.1\|1457103_1457997_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_077995894.1\|1458353_1458929_-	hypothetical protein	NA	NA	NA	NA
WP_077995895.1\|1459039_1460188_-	transglutaminase domain-containing protein	NA	NA	NA	NA
WP_077995896.1\|1460215_1460455_-	hypothetical protein	NA	NA	NA	NA
WP_155116295.1\|1460477_1460630_-	hypothetical protein	NA	NA	NA	NA
WP_023483263.1\|1460748_1461891_+	MFS transporter	NA	NA	NA	NA
WP_077995897.1\|1462090_1462441_+	DNA primase	NA	NA	NA	NA
WP_077995898.1\|1462442_1463084_-	SCO family protein	NA	NA	NA	NA
WP_096761322.1\|1463174_1464101_-	protoheme IX farnesyltransferase	NA	NA	NA	NA
WP_024094881.1\|1464345_1466358_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.2e-11	24.3
WP_023483257.1\|1466965_1467445_+\|coat	spore coat protein GerQ	NA	NA	NA	NA
WP_077995899.1\|1467483_1467762_-	hypothetical protein	NA	NA	NA	NA
WP_036654885.1\|1467849_1468833_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_023483255.1\|1468969_1469194_-	alpha/beta-type small acid-soluble spore protein	A0A1P8CX76	Bacillus_phage	5.6e-10	47.8
WP_042119744.1\|1469320_1469506_+	DUF5325 family protein	NA	NA	NA	NA
WP_036654887.1\|1469698_1470685_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_077995900.1\|1471063_1472527_-	cobyrinate a,c-diamide synthase	NA	NA	NA	NA
WP_036654889.1\|1472694_1473333_-	ribonuclease H family protein	NA	NA	NA	NA
1473939:1473955	attL	NA	NA	NA	NA
WP_077995901.1\|1474074_1474461_+	DUF3862 domain-containing protein	NA	NA	NA	NA
WP_077584997.1\|1474672_1474759_-\|holin	putative holin-like toxin	A0A0K2CZR6	Paenibacillus_phage	2.0e-05	100.0
WP_158672803.1\|1474854_1475082_-	helix-turn-helix transcriptional regulator	A0A0K2CYV5	Paenibacillus_phage	3.0e-27	85.1
WP_077995903.1\|1475550_1475736_+	hypothetical protein	A0A0K2CZ26	Paenibacillus_phage	3.6e-23	82.0
WP_077995904.1\|1475821_1476085_+	hypothetical protein	A0A0K2CYM1	Paenibacillus_phage	1.4e-41	97.7
WP_077995905.1\|1476213_1476597_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.4e-69	99.2
WP_077995906.1\|1476590_1476932_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.2e-57	100.0
WP_036654509.1\|1477102_1477786_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932814.1\|1477938_1478574_-	hypothetical protein	NA	NA	NA	NA
WP_077995908.1\|1478608_1479325_-	hypothetical protein	NA	NA	NA	NA
WP_077995909.1\|1479460_1479703_-\|transposase	transposase	A0A2I7SCT4	Paenibacillus_phage	1.1e-32	96.2
WP_077997545.1\|1479712_1480381_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A2I7SD00	Paenibacillus_phage	2.5e-130	96.4
WP_024094328.1\|1480380_1480620_-	hypothetical protein	A0A0C5AEG8	Bacteriophage	2.8e-36	100.0
WP_077995910.1\|1480799_1481132_-	hypothetical protein	A0A2I7SBZ3	Paenibacillus_phage	8.2e-50	87.2
WP_077995911.1\|1481141_1481894_-	hypothetical protein	A0A0K2CZJ3	Paenibacillus_phage	4.8e-82	98.0
WP_077995912.1\|1481896_1483369_-\|tail	phage tail protein	A0A1B2APX2	Phage_Wrath	1.2e-124	53.9
WP_077995913.1\|1483368_1484070_-	hypothetical protein	A0A1B2APY0	Phage_Wrath	2.9e-44	42.1
WP_149867716.1\|1484072_1485209_-	hypothetical protein	A0A097PAU2	Streptococcus_pyogenes_phage	1.1e-16	65.1
WP_077995249.1\|1485563_1486784_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077995915.1\|1486842_1488639_-	tape measure protein	M1IEW1	Bacillus_virus	1.3e-53	39.8
WP_104932815.1\|1488659_1488959_-	phenylalanine racemase	A0A097PAX1	Streptococcus_pyogenes_phage	3.7e-17	47.4
WP_077997546.1\|1489072_1489375_-	segregation and condensation protein B	NA	NA	NA	NA
WP_077995917.1\|1489377_1489896_-\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.0e-51	71.6
WP_077995918.1\|1489909_1490320_-	DUF5072 family protein	A0A097PAW5	Streptococcus_pyogenes_phage	1.7e-33	44.1
WP_036658585.1\|1490324_1490660_-	hypothetical protein	A0A097PAT9	Streptococcus_pyogenes_phage	2.4e-09	37.2
WP_077995919.1\|1490665_1490971_-	hypothetical protein	NA	NA	NA	NA
WP_077995920.1\|1490967_1491288_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_077995921.1\|1491290_1491839_-	hypothetical protein	A7J297	Streptococcus_phage	7.2e-35	49.2
WP_077995249.1\|1491917_1493138_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077995922.1\|1493179_1493545_-	hypothetical protein	A7J297	Streptococcus_phage	1.2e-25	55.3
WP_077995923.1\|1493557_1494148_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_077995924.1\|1494234_1495128_-\|capsid	minor capsid protein	S5MTV5	Brevibacillus_phage	8.7e-38	33.9
WP_077995925.1\|1495036_1496449_-\|portal	phage portal protein	A0A1P8BLJ1	Lactococcus_phage	7.4e-116	49.3
WP_188318628.1\|1496449_1497871_-\|terminase	phage terminase large subunit	A0A090EUA8	Clostridium_phage	3.0e-189	69.2
WP_077997548.1\|1497863_1498361_-\|transposase	transposase	A0A0E3U2Q7	Fusobacterium_phage	6.7e-40	65.2
WP_077995926.1\|1498576_1499200_-	RNA polymerase subunit sigma-24	NA	NA	NA	NA
WP_077995927.1\|1499165_1499405_-	hypothetical protein	A0A0K2CZP1	Paenibacillus_phage	9.8e-21	75.4
WP_158672804.1\|1499522_1500626_-	sigma-70 family RNA polymerase sigma factor	A0A2I7SC33	Paenibacillus_phage	4.2e-183	89.6
WP_077995929.1\|1500642_1500864_-	hypothetical protein	A0A0K2CZG3	Paenibacillus_phage	5.5e-34	94.5
WP_077995930.1\|1500867_1501263_-	RusA family crossover junction endodeoxyribonuclease	A0A2I7SC39	Paenibacillus_phage	6.9e-72	97.7
WP_188318629.1\|1501243_1501648_+	hypothetical protein	NA	NA	NA	NA
WP_077995932.1\|1501816_1504069_-	AAA family ATPase	A0A2I7SC35	Paenibacillus_phage	0.0e+00	99.9
WP_077995933.1\|1504073_1504403_-	hypothetical protein	A0A2I7SC50	Paenibacillus_phage	1.9e-62	99.1
WP_077995934.1\|1504399_1505989_-	DEAD/DEAH box helicase	A0A2I7SC38	Paenibacillus_phage	1.4e-301	98.9
WP_023485397.1\|1505998_1506499_-	hypothetical protein	A0A2I7SC41	Paenibacillus_phage	3.1e-93	100.0
WP_051427849.1\|1506523_1507222_-	hypothetical protein	A0A2I7SC26	Paenibacillus_phage	5.2e-139	100.0
WP_077995935.1\|1507253_1508357_-	ATP-binding protein	A0A2I7SC30	Paenibacillus_phage	7.6e-209	99.2
WP_077995936.1\|1508356_1509667_-	AAA family ATPase	A0A2I7SC23	Paenibacillus_phage	2.5e-174	76.4
WP_077995937.1\|1509727_1510438_-	hypothetical protein	A0A2I7SC22	Paenibacillus_phage	5.7e-125	98.3
WP_023484471.1\|1510487_1510859_-	hypothetical protein	A0A2I7SC29	Paenibacillus_phage	3.4e-60	100.0
WP_051427850.1\|1510888_1511173_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	3.8e-48	100.0
WP_077995938.1\|1511169_1511409_-	hypothetical protein	A0A2I7SC43	Paenibacillus_phage	2.2e-25	75.9
WP_077995939.1\|1511424_1511679_-	hypothetical protein	A0A0K2CYH1	Paenibacillus_phage	2.8e-10	43.4
WP_077995940.1\|1511650_1511872_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077995941.1\|1511956_1512199_-	helix-turn-helix transcriptional regulator	A0A0K2CZL1	Paenibacillus_phage	2.4e-22	69.3
WP_077995942.1\|1512323_1512656_+	helix-turn-helix transcriptional regulator	A0A0K2CZS1	Paenibacillus_phage	2.7e-16	55.8
WP_077995943.1\|1512665_1513127_+	ImmA/IrrE family metallo-endopeptidase	R9TQI1	Paenibacillus_phage	8.7e-50	64.1
WP_077995944.1\|1513208_1514348_+\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	4.2e-61	39.6
1514356:1514372	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1595097 : 1719569

111

Paenibacillus_phage(20.0%)

protease,transposase,holin,integrase

attL 1596961:1596975|attR 1726816:1726830

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077995988.1\|1595097_1595643_-\|protease	spore protease YyaC	G3M9W0	Bacillus_virus	7.0e-22	37.4
1596961:1596975	attL	NA	NA	NA	NA
WP_077995989.1\|1597334_1600562_+	lantibiotic dehydratase	A0A2H4PQG8	Staphylococcus_phage	1.1e-77	24.4
1596961:1596975	attL	NA	NA	NA	NA
WP_158672808.1\|1600554_1601910_+	lanthionine synthetase C family protein	NA	NA	NA	NA
WP_077995991.1\|1602198_1603515_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_077995992.1\|1603803_1604787_-	hypothetical protein	NA	NA	NA	NA
WP_077995993.1\|1605134_1606658_-	cation:proton antiporter	NA	NA	NA	NA
WP_077995994.1\|1606585_1607152_-	cation:proton antiporter	NA	NA	NA	NA
WP_036658223.1\|1607191_1607470_-	hypothetical protein	NA	NA	NA	NA
WP_188318632.1\|1607574_1607889_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	3.2e-11	46.3
WP_188318633.1\|1607779_1608148_+	ATP-binding cassette domain-containing protein	W8CYT2	Bacillus_phage	1.2e-09	50.9
WP_077995995.1\|1608265_1609063_-	C39 family peptidase	NA	NA	NA	NA
WP_149867718.1\|1610930_1611959_-	thermonuclease family protein	NA	NA	NA	NA
WP_158672809.1\|1612261_1612651_+	TRIC cation channel family protein	NA	NA	NA	NA
WP_077997553.1\|1612626_1613379_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_188318650.1\|1613475_1614660_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_036658210.1\|1614694_1616254_-	PTS maltose transporter subunit IICB	NA	NA	NA	NA
WP_024094951.1\|1617019_1617268_+	hypothetical protein	NA	NA	NA	NA
WP_036658206.1\|1617274_1617538_+	hypothetical protein	NA	NA	NA	NA
WP_024094953.1\|1617721_1618663_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_077996000.1\|1618844_1619465_+	DUF3298 and DUF4163 domain-containing protein	NA	NA	NA	NA
WP_077997554.1\|1619680_1620871_-	MFS transporter	NA	NA	NA	NA
WP_023484416.1\|1620906_1621596_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_149867719.1\|1621795_1622110_-	hypothetical protein	NA	NA	NA	NA
WP_077996002.1\|1622561_1623833_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-09	27.0
WP_077996004.1\|1624070_1624565_-	DUF4261 domain-containing protein	NA	NA	NA	NA
WP_155116244.1\|1624580_1624724_-	hypothetical protein	NA	NA	NA	NA
WP_077996005.1\|1624927_1625458_+	lysoplasmalogenase	NA	NA	NA	NA
WP_149867720.1\|1625452_1626217_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_104932770.1\|1626487_1627228_-	hypothetical protein	NA	NA	NA	NA
WP_077996008.1\|1627409_1627634_+	hypothetical protein	NA	NA	NA	NA
WP_077996009.1\|1627732_1628347_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_077996010.1\|1628378_1630295_-	AAA family ATPase	Q331U3	Clostridium_botulinum_C_phage	3.2e-05	35.2
WP_077996011.1\|1630554_1631841_+	MFS transporter	NA	NA	NA	NA
WP_077996012.1\|1632068_1632401_-	hypothetical protein	NA	NA	NA	NA
WP_036658190.1\|1632719_1632989_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_077997555.1\|1633021_1633315_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_023483432.1\|1633566_1633857_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077996013.1\|1633853_1636364_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_036658187.1\|1636468_1636765_+	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|1637867_1639091_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077996014.1\|1639246_1640695_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-123	48.9
WP_023483464.1\|1640829_1641216_-	DUF1878 family protein	NA	NA	NA	NA
WP_077996015.1\|1641237_1641696_-	hypothetical protein	NA	NA	NA	NA
WP_155121056.1\|1642387_1642537_-	hypothetical protein	NA	NA	NA	NA
WP_149867721.1\|1642526_1643735_-	DNA-binding protein	A0A0K2CP77	Brevibacillus_phage	1.7e-68	36.5
WP_077996017.1\|1643982_1644144_-\|transposase	transposase	NA	NA	NA	NA
WP_155121057.1\|1644608_1644761_-	hypothetical protein	NA	NA	NA	NA
WP_077996018.1\|1644750_1645359_-	hypothetical protein	A0A0K2CP77	Brevibacillus_phage	1.1e-31	34.5
WP_077996019.1\|1645401_1646106_-	hypothetical protein	NA	NA	NA	NA
WP_077996021.1\|1647051_1647492_+	hypothetical protein	NA	NA	NA	NA
WP_077996022.1\|1647624_1647996_-	3'-5' exonuclease	A2I2Z6	Vibrio_virus	1.8e-13	42.0
WP_077996023.1\|1648263_1648563_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_149867722.1\|1648596_1649031_-	hypothetical protein	NA	NA	NA	NA
WP_077996025.1\|1649466_1650996_-	alkyl hydroperoxide reductase subunit F	A0A2I2L5E1	Orpheovirus	5.7e-37	32.4
WP_042118705.1\|1651007_1651571_-	peroxiredoxin	NA	NA	NA	NA
WP_036658506.1\|1651714_1651879_-	FeoB-associated Cys-rich membrane protein	NA	NA	NA	NA
WP_077996026.1\|1651895_1653884_-	ferrous iron transport protein B	NA	NA	NA	NA
WP_036658128.1\|1653880_1654108_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_077996027.1\|1655685_1656843_+	MFS transporter	NA	NA	NA	NA
1655762:1655776	attR	NA	NA	NA	NA
WP_036658123.1\|1657101_1657614_+\|transposase	IS630 family transposase	NA	NA	NA	NA
1655762:1655776	attR	NA	NA	NA	NA
WP_077996028.1\|1657631_1657904_+\|transposase	transposase	NA	NA	NA	NA
WP_077997556.1\|1658046_1658970_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.4e-30	32.6
WP_077996029.1\|1659484_1659847_-	hypothetical protein	A0A2I7SCG2	Paenibacillus_phage	9.9e-49	80.0
WP_104932772.1\|1659860_1660310_-	hypothetical protein	A0A2I7SCF1	Paenibacillus_phage	5.0e-58	80.8
WP_077996030.1\|1660890_1661865_+	hypothetical protein	NA	NA	NA	NA
WP_077996031.1\|1661816_1662632_+	S8 family peptidase	A0A127AWU5	Bacillus_phage	1.1e-36	37.4
WP_077996032.1\|1662876_1663251_-	hypothetical protein	NA	NA	NA	NA
WP_077996033.1\|1663226_1664141_-	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|1664173_1665397_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077997558.1\|1665511_1665700_-	hypothetical protein	A0A1V0E026	Clostridioides_phage	6.5e-12	58.9
WP_051428085.1\|1665683_1665875_-	hypothetical protein	NA	NA	NA	NA
WP_077996034.1\|1665927_1666674_-	ADP-ribosyltransferase	Q331X8	Clostridium_botulinum_C_phage	1.7e-31	40.9
WP_077996035.1\|1669398_1670445_-	aminomethyl transferase family protein	NA	NA	NA	NA
WP_077996036.1\|1670447_1673240_-	hypothetical protein	NA	NA	NA	NA
WP_077996037.1\|1673236_1673725_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_024093465.1\|1673731_1674019_-	acyl carrier protein	NA	NA	NA	NA
WP_023484175.1\|1674141_1674888_-	3-oxoacyl-ACP reductase FabG	W8CYX9	Bacillus_phage	4.9e-10	46.1
WP_077996038.1\|1674880_1675831_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_036655264.1\|1675827_1676247_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_024093462.1\|1676252_1677407_-	ABC transporter permease	NA	NA	NA	NA
WP_077996039.1\|1677582_1678530_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-24	32.4
WP_042118638.1\|1678922_1679975_+	Fic family protein	NA	NA	NA	NA
WP_024093460.1\|1680410_1682294_-	molecular chaperone HtpG	A0A1V0SAD6	Catovirus	3.6e-94	34.4
WP_158672810.1\|1683012_1683810_-	ABC-2 family transporter protein	NA	NA	NA	NA
WP_077996042.1\|1683814_1684693_-	ABC-2 family transporter protein	NA	NA	NA	NA
WP_077996043.1\|1687461_1688361_-	DUF91 domain-containing protein	NA	NA	NA	NA
WP_188318666.1\|1688510_1691675_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_104932817.1\|1691735_1692362_-	hypothetical protein	NA	NA	NA	NA
WP_077996045.1\|1692489_1693950_-	hypothetical protein	NA	NA	NA	NA
WP_188318634.1\|1693934_1694375_-	DUF2399 domain-containing protein	NA	NA	NA	NA
WP_077996047.1\|1694371_1695238_-	hypothetical protein	NA	NA	NA	NA
WP_155121059.1\|1695463_1695601_-	hypothetical protein	NA	NA	NA	NA
WP_077996048.1\|1695889_1699240_-	DEAD/DEAH box helicase family protein	Q5YA94	Bacillus_phage	2.0e-18	22.9
WP_158672811.1\|1699250_1699661_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_077995375.1\|1699742_1700966_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077996050.1\|1700958_1701792_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_077996051.1\|1701848_1703306_-	SAM-dependent DNA methyltransferase	A0A1W6JNK1	Staphylococcus_phage	4.2e-21	28.6
WP_077584997.1\|1703856_1703943_-\|holin	putative holin-like toxin	A0A0K2CZR6	Paenibacillus_phage	2.0e-05	100.0
WP_149867724.1\|1704116_1704626_+	hypothetical protein	NA	NA	NA	NA
WP_077996053.1\|1705322_1708496_-	type 2 lantipeptide synthetase LanM family protein	NA	NA	NA	NA
WP_077996054.1\|1708597_1708819_-	mersacidin/lichenicidin family type 2 lantibiotic	NA	NA	NA	NA
WP_077996055.1\|1708919_1710074_-	ABC transporter permease	NA	NA	NA	NA
WP_077996056.1\|1710079_1710778_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.1e-14	30.0
WP_077996057.1\|1710793_1711804_-	S8 family serine peptidase	A0A2H4PQH1	Staphylococcus_phage	1.2e-22	28.9
WP_051428052.1\|1711800_1712049_-	response regulator transcription factor	NA	NA	NA	NA
WP_188318635.1\|1712254_1712419_+	hypothetical protein	NA	NA	NA	NA
WP_077997560.1\|1714894_1716832_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-11	44.2
WP_158672813.1\|1717148_1717433_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_077996060.1\|1717446_1718118_-	antA/AntB antirepressor family protein	O48391	Streptococcus_phage	9.8e-18	68.8
WP_149867726.1\|1718904_1719276_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158672814.1\|1719401_1719569_-\|transposase	transposase	NA	NA	NA	NA
1726816:1726830	attR	NA	NA	NA	NA

DBSCAN-SWA_10

1813153 : 1863856

Paenibacillus_phage(43.75%)

tRNA,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077996096.1\|1813153_1814323_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_077996097.1\|1814351_1814939_-	DUF402 domain-containing protein	NA	NA	NA	NA
WP_024093346.1\|1815219_1815648_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024093345.1\|1815928_1816558_-	ABC transporter permease	NA	NA	NA	NA
WP_077996098.1\|1816601_1817495_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_036657132.1\|1818163_1819312_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.9e-27	33.6
WP_077996099.1\|1819735_1821037_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_077996100.1\|1822061_1823069_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_024093340.1\|1823732_1824347_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	7.5e-73	62.6
WP_077996101.1\|1824464_1827083_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_077996102.1\|1827143_1828130_-	ABC transporter permease	NA	NA	NA	NA
WP_024093337.1\|1828126_1828903_-	ABC transporter permease	NA	NA	NA	NA
WP_077996103.1\|1828918_1829866_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-23	30.4
WP_079940453.1\|1830025_1830235_-	hypothetical protein	NA	NA	NA	NA
WP_077585258.1\|1830583_1830739_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	9.8e-06	46.0
WP_036655317.1\|1831050_1831353_-	hypothetical protein	NA	NA	NA	NA
WP_077996105.1\|1832778_1833120_+	hypothetical protein	NA	NA	NA	NA
WP_023485170.1\|1833344_1833737_-	holo-ACP synthase	NA	NA	NA	NA
WP_036655319.1\|1833831_1834737_-	ABC transporter permease	NA	NA	NA	NA
WP_077996106.1\|1834729_1835656_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-36	36.9
WP_023485173.1\|1835860_1836667_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	1.3e-53	45.2
WP_077585259.1\|1837113_1837542_-	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA
WP_023485175.1\|1837686_1838040_-	DUF3905 domain-containing protein	NA	NA	NA	NA
WP_077996107.1\|1838043_1838910_-	hypothetical protein	NA	NA	NA	NA
WP_077996108.1\|1839027_1839750_-	PspA/IM30 family protein	NA	NA	NA	NA
WP_023485178.1\|1839752_1840271_-	PspC domain-containing protein	NA	NA	NA	NA
WP_077996109.1\|1840277_1840943_-	PspA/IM30 family protein	NA	NA	NA	NA
WP_077996110.1\|1840997_1841288_-	hypothetical protein	NA	NA	NA	NA
WP_023485180.1\|1841546_1842233_-	SHOCT domain-containing protein	NA	NA	NA	NA
WP_077996111.1\|1842372_1843395_+	metallophosphoesterase	NA	NA	NA	NA
WP_077996112.1\|1843391_1843928_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_077996113.1\|1844223_1844538_-	hypothetical protein	NA	NA	NA	NA
WP_104932657.1\|1844557_1845427_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_036654509.1\|1845447_1846131_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077996114.1\|1846197_1846458_-	hypothetical protein	NA	NA	NA	NA
WP_077996115.1\|1846547_1847033_+	hypothetical protein	NA	NA	NA	NA
WP_077996116.1\|1847189_1848458_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	1.4e-28	60.2
WP_042118522.1\|1848556_1848919_-	hypothetical protein	NA	NA	NA	NA
WP_077996117.1\|1848997_1849330_-	hypothetical protein	NA	NA	NA	NA
WP_149867728.1\|1849314_1849779_-	ABC transporter permease	NA	NA	NA	NA
WP_077996119.1\|1850779_1851373_+	undecaprenyl-diphosphatase	NA	NA	NA	NA
WP_158672815.1\|1851479_1851716_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	2.6e-26	98.3
WP_077995375.1\|1851780_1853004_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077996122.1\|1853765_1854449_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.7e-118	96.9
WP_024093255.1\|1854636_1855338_+	response regulator transcription factor	W8CYM9	Bacillus_phage	7.3e-32	36.1
WP_077996123.1\|1855327_1856707_+	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.7e-19	31.9
WP_024093253.1\|1856864_1857386_+	C40 family peptidase	NA	NA	NA	NA
WP_077996124.1\|1857459_1857942_-	hypothetical protein	NA	NA	NA	NA
WP_077996125.1\|1857992_1858724_-	VOC family protein	NA	NA	NA	NA
WP_077996126.1\|1859123_1859915_+	YwmB family TATA-box binding protein	NA	NA	NA	NA
WP_077996127.1\|1859911_1860814_-	EamA family transporter	NA	NA	NA	NA
WP_051427941.1\|1861145_1862129_-	phosphotransferase	NA	NA	NA	NA
WP_036654509.1\|1862282_1862966_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|1862986_1863856_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0

DBSCAN-SWA_11

1873462 : 1917210

Paenibacillus_phage(44.44%)

transposase,bacteriocin,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077996132.1\|1873462_1873867_-\|holin	phage holin family protein	A0A0N7GFE6	Paenibacillus_phage	5.1e-30	55.3
WP_077996133.1\|1874085_1874334_+	hypothetical protein	NA	NA	NA	NA
WP_024093234.1\|1874488_1874740_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158672816.1\|1874805_1875399_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_077995375.1\|1875573_1876797_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077996135.1\|1877436_1878645_+	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_077996136.1\|1878634_1878862_+	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_077995249.1\|1879211_1880432_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077996137.1\|1880473_1880743_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024093230.1\|1880745_1880916_-	hypothetical protein	NA	NA	NA	NA
WP_023483551.1\|1880922_1881348_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_077996138.1\|1882669_1883908_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_023483554.1\|1884035_1884869_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077996139.1\|1885316_1886123_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_077996140.1\|1886305_1887484_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_077996141.1\|1887532_1889893_-	UvrD-helicase domain-containing protein	A0A1E1ETV1	Acanthamoeba_castellanii_mimivirus	2.9e-08	25.5
WP_036657148.1\|1890136_1890592_-	hypothetical protein	NA	NA	NA	NA
WP_077996142.1\|1890648_1891587_+	MFS transporter	NA	NA	NA	NA
WP_077996143.1\|1893706_1894975_-	ABC transporter permease	NA	NA	NA	NA
WP_077996144.1\|1894967_1895873_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-23	30.0
WP_077995375.1\|1896175_1897399_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077996145.1\|1898825_1899692_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_024093219.1\|1899818_1900133_-	cytochrome C oxidase subunit IV family protein	NA	NA	NA	NA
WP_077996146.1\|1900137_1900755_-	cytochrome (ubi)quinol oxidase subunit III	NA	NA	NA	NA
WP_077996147.1\|1902747_1903755_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_023483567.1\|1904293_1904878_+	guanylate kinase	A0A0K2FM14	Brevibacillus_phage	2.9e-10	28.3
WP_036655364.1\|1905155_1906292_+	conserved virulence factor C family protein	NA	NA	NA	NA
WP_023483569.1\|1906467_1907457_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_077996149.1\|1907781_1908087_+	hypothetical protein	NA	NA	NA	NA
WP_077996150.1\|1908197_1908887_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_104935376.1\|1908802_1909765_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	3.1e-57	50.6
WP_077996153.1\|1910016_1911990_-	hypothetical protein	NA	NA	NA	NA
WP_077996154.1\|1912285_1912642_-	hypothetical protein	NA	NA	NA	NA
WP_077996155.1\|1912638_1913334_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.2e-18	33.9
WP_024093206.1\|1914191_1914569_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_188318637.1\|1914933_1915101_+	hypothetical protein	NA	NA	NA	NA
WP_036655372.1\|1916573_1916756_+	hypothetical protein	NA	NA	NA	NA
WP_077996157.1\|1916910_1917210_+\|bacteriocin	uberolysin/carnocyclin family circular bacteriocin	NA	NA	NA	NA

DBSCAN-SWA_12

1935634 : 1943330

Pneumococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077996172.1\|1935634_1936153_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.2e-49	63.1
WP_024093191.1\|1936179_1936917_-	7-carboxy-7-deazaguanine synthase QueE	E7DN68	Pneumococcus_phage	4.2e-54	41.8
WP_077996173.1\|1936909_1937395_-	6-carboxytetrahydropterin synthase QueD	J9PV91	Bacillus_phage	7.7e-57	68.2
WP_077996174.1\|1937391_1938063_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.4e-67	58.3
WP_077996175.1\|1938611_1940315_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	4.0e-76	32.3
WP_077996177.1\|1941347_1943330_+	acyltransferase family protein	B5WZU0	Pseudomonas_phage	2.0e-42	32.7

DBSCAN-SWA_13

1965075 : 2028496

Paenibacillus_phage(35.71%)

transposase,protease,integrase

attL 1987324:1987383|attR 2000568:2002290

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077995397.1\|1965075_1966299_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
WP_188318639.1\|1966724_1967231_+	hypothetical protein	NA	NA	NA	NA
WP_036655414.1\|1967872_1968178_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_077996189.1\|1968187_1968517_+	sensor histidine kinase	NA	NA	NA	NA
WP_077996190.1\|1968864_1969731_-	UbiA family prenyltransferase	NA	NA	NA	NA
WP_077996191.1\|1969720_1971160_-	menaquinone biosynthesis decarboxylase	NA	NA	NA	NA
WP_024093162.1\|1972482_1974405_-	U32 family peptidase	NA	NA	NA	NA
WP_077996192.1\|1974537_1975341_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_036655420.1\|1975356_1976223_-	energy-coupling factor transporter ATPase	W8CYL7	Bacillus_phage	4.2e-13	28.9
WP_077996193.1\|1976198_1977032_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	2.4e-21	33.7
WP_077997564.1\|1977067_1977637_-	Gx transporter family protein	NA	NA	NA	NA
WP_077997565.1\|1977614_1978013_-	NusG domain II-containing protein	NA	NA	NA	NA
WP_077996194.1\|1978293_1979361_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_036655424.1\|1979808_1981038_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_158672820.1\|1981563_1983162_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_158672821.1\|1983235_1983634_-\|transposase	transposase	A0A2I7RFB5	Vibrio_phage	9.9e-10	34.5
WP_077996198.1\|1984222_1984567_+	hypothetical protein	NA	NA	NA	NA
WP_077996199.1\|1985084_1985474_-	hypothetical protein	NA	NA	NA	NA
WP_077995782.1\|1985458_1986028_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077996200.1\|1986600_1987083_+	hypothetical protein	NA	NA	NA	NA
1987324:1987383	attL	NA	NA	NA	NA
WP_104932621.1\|1987402_1988272_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|1988292_1988976_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077996201.1\|1989424_1989739_+	helix-turn-helix domain-containing protein	A0A1B1P776	Bacillus_phage	4.0e-14	41.6
WP_158672822.1\|1989830_1990250_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_077996203.1\|1990788_1991208_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_077996204.1\|1991214_1991868_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_188318640.1\|1997120_1998878_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	7.0e-15	30.7
WP_036654509.1\|1998974_1999658_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|1999678_2000548_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077996206.1\|2000687_2004383_+	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	2.3e-76	30.8
2000568:2002290	attR	NA	NA	NA	NA
WP_023485438.1\|2004447_2004870_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_036655428.1\|2004887_2005760_-	PTS N-acetylgalactosamine transporter subunit IID	NA	NA	NA	NA
WP_024093152.1\|2007214_2007940_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_036655432.1\|2008171_2008600_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_077996207.1\|2008961_2009150_+	hypothetical protein	NA	NA	NA	NA
WP_077996208.1\|2009194_2009404_+	hypothetical protein	NA	NA	NA	NA
WP_077996210.1\|2010355_2010622_+	hypothetical protein	NA	NA	NA	NA
WP_077996211.1\|2010610_2011579_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_077996212.1\|2011633_2012221_-	peptide deformylase	E3SLL2	Synechococcus_phage	1.2e-11	36.8
WP_077996213.1\|2012416_2015584_-	MMPL family transporter	NA	NA	NA	NA
WP_023485427.1\|2015580_2016036_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_077996214.1\|2016864_2017575_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_077996215.1\|2017694_2019734_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-11	43.3
WP_077585116.1\|2020193_2020301_+	TipAS antibiotic-recognition domain-containing protein	NA	NA	NA	NA
WP_077996216.1\|2020802_2021129_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_077996217.1\|2021854_2022904_+	lytic polysaccharide monooxygenase	A0A0K1Y848	Apis_mellifera_filamentous_virus	2.6e-25	41.2
WP_077996218.1\|2023336_2024566_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_188318641.1\|2024902_2025223_-	lectin	NA	NA	NA	NA
WP_024093143.1\|2025514_2025700_+	sporulation killing factor	NA	NA	NA	NA
WP_077996220.1\|2025773_2026988_+	sporulation killing factor system radical SAM maturase	NA	NA	NA	NA
WP_077996221.1\|2027002_2028496_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_14

2499030 : 2544570

Paenibacillus_phage(35.29%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932621.1\|2499030_2499900_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|2499920_2500604_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077996441.1\|2500775_2501543_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.5e-22	29.1
WP_024092908.1\|2501539_2501950_+	hypothetical protein	NA	NA	NA	NA
WP_036657321.1\|2502160_2502574_+	flagellar protein	NA	NA	NA	NA
WP_024092910.1\|2502682_2502943_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
WP_158672701.1\|2502975_2503479_+	flagellar protein FlgN	NA	NA	NA	NA
WP_077996443.1\|2503491_2505051_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA
WP_077996444.1\|2505063_2505969_+	flagellar hook-associated protein FlgL	NA	NA	NA	NA
WP_077996445.1\|2505979_2506543_+	hypothetical protein	NA	NA	NA	NA
WP_077996446.1\|2506626_2507079_+	flagellar assembly protein FliW	NA	NA	NA	NA
WP_077996447.1\|2507086_2507326_+	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	1.0e-06	49.0
WP_077996448.1\|2507740_2509210_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	6.5e-123	48.6
WP_077996449.1\|2511030_2512212_+	flagellin	NA	NA	NA	NA
WP_077996450.1\|2512363_2512738_+	flagellar protein FlaG	NA	NA	NA	NA
WP_077996451.1\|2512764_2514321_+	flagellar filament capping protein FliD	NA	NA	NA	NA
WP_077996452.1\|2514343_2514745_+	flagellar export chaperone FliS	NA	NA	NA	NA
WP_077996453.1\|2514728_2515067_+	flagellar protein FliT	NA	NA	NA	NA
WP_036654509.1\|2515157_2515841_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|2515861_2516731_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_023485092.1\|2517138_2517336_+	cold shock domain-containing protein	Q9AZD3	Lactococcus_phage	4.9e-18	66.1
WP_023485093.1\|2517657_2518206_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_158672702.1\|2518616_2519048_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077996455.1\|2519980_2520490_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_077996458.1\|2521785_2524293_+	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_096761233.1\|2524336_2525452_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	3.2e-05	38.7
WP_077997600.1\|2525585_2526401_+	YitT family protein	M1Q1P6	Streptococcus_phage	1.6e-30	32.0
WP_077996459.1\|2526609_2527692_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_077996460.1\|2527765_2528992_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA
WP_077997601.1\|2529049_2529334_+	hypothetical protein	NA	NA	NA	NA
WP_104932621.1\|2529405_2530275_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|2530295_2530979_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077996461.1\|2531044_2531569_+	acetylglutamate kinase	NA	NA	NA	NA
WP_077996462.1\|2531622_2532837_+	acetylornithine transaminase	A0A1V0SKB7	Klosneuvirus	4.8e-31	28.1
WP_104932623.1\|2532833_2533799_+	ornithine carbamoyltransferase	Q84489	Paramecium_bursaria_Chlorella_virus	1.0e-23	29.1
WP_077996464.1\|2533824_2535051_+	argininosuccinate synthase	NA	NA	NA	NA
WP_077996465.1\|2535138_2536548_+	argininosuccinate lyase	NA	NA	NA	NA
WP_052337357.1\|2536721_2538173_-	VanW family protein	NA	NA	NA	NA
WP_077996466.1\|2538590_2539277_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	3.8e-25	34.5
WP_077996467.1\|2539266_2540187_+	ABC transporter permease	NA	NA	NA	NA
WP_077996468.1\|2540339_2541611_+	peptidoglycan DD-metalloendopeptidase family protein	S5M424	Bacillus_phage	1.4e-20	44.3
WP_036657328.1\|2541711_2543145_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	2.1e-25	29.7
WP_077996469.1\|2543283_2544570_+\|protease	serine protease	NA	NA	NA	NA

DBSCAN-SWA_15

2862375 : 2927163

Paenibacillus_phage(43.75%)

transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077996638.1\|2862375_2862630_+\|transposase	transposase	NA	NA	NA	NA
WP_077996640.1\|2863113_2864214_+	hypothetical protein	NA	NA	NA	NA
WP_155121069.1\|2864463_2864640_+	hypothetical protein	NA	NA	NA	NA
WP_077996641.1\|2864804_2865311_+	hypothetical protein	NA	NA	NA	NA
WP_077996642.1\|2865329_2865656_+	hypothetical protein	NA	NA	NA	NA
WP_077996644.1\|2866571_2867453_+	hypothetical protein	NA	NA	NA	NA
WP_077996645.1\|2867475_2868408_+	type III-B CRISPR module RAMP protein Cmr1	NA	NA	NA	NA
WP_077996646.1\|2868407_2870081_+	type III-B CRISPR-associated protein Cas10/Cmr2	NA	NA	NA	NA
WP_077996647.1\|2870080_2871076_+	hypothetical protein	NA	NA	NA	NA
WP_172422807.1\|2871196_2872114_+	type III-B CRISPR module RAMP protein Cmr4	NA	NA	NA	NA
WP_042118428.1\|2872097_2872502_+	type III-B CRISPR module-associated protein Cmr5	NA	NA	NA	NA
WP_149867747.1\|2872575_2873334_+	type III-B CRISPR module RAMP protein Cmr6	NA	NA	NA	NA
WP_188318664.1\|2873629_2873794_+	hypothetical protein	A0A1X9I5T2	Streptococcus_phage	2.5e-07	54.5
WP_077996650.1\|2875234_2875906_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.6e-12	29.7
WP_024093118.1\|2875902_2876073_+	hypothetical protein	NA	NA	NA	NA
WP_077996651.1\|2878035_2878524_+	hypothetical protein	NA	NA	NA	NA
WP_077996653.1\|2879975_2881232_+	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
WP_077996654.1\|2881399_2882587_+	alanine racemase	NA	NA	NA	NA
WP_172423825.1\|2882830_2883103_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_023485406.1\|2883106_2883457_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A2P0ZKX3	Lactobacillus_phage	6.9e-15	38.6
WP_104932789.1\|2883628_2885833_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_077997616.1\|2886034_2886601_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_023485404.1\|2886998_2887457_+	hypothetical protein	NA	NA	NA	NA
WP_024093128.1\|2887541_2887769_+	hypothetical protein	NA	NA	NA	NA
WP_077996655.1\|2888024_2888588_+	hypothetical protein	NA	NA	NA	NA
WP_077996656.1\|2888557_2889223_+	S8 family peptidase	A0A217EQY2	Bacillus_phage	2.2e-33	39.5
WP_096761197.1\|2889531_2889639_-	cortex morphogenetic protein CmpA	NA	NA	NA	NA
WP_077996657.1\|2889800_2890157_-	hydrolase/acyltransferase	NA	NA	NA	NA
WP_077996658.1\|2890255_2890726_+	SprT family protein	NA	NA	NA	NA
WP_077996659.1\|2892436_2893201_-	hypothetical protein	NA	NA	NA	NA
WP_077996660.1\|2893500_2894091_+	hypothetical protein	S5MNY5	Brevibacillus_phage	1.1e-12	24.9
WP_077996661.1\|2894102_2894393_+	hypothetical protein	E2ELK3	Clostridium_phage	1.5e-18	50.5
WP_188318551.1\|2894392_2894551_+	hypothetical protein	A0A2H4J054	uncultured_Caudovirales_phage	4.3e-09	60.9
WP_036655918.1\|2894706_2894943_+\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	6.0e-31	98.6
WP_077996662.1\|2895620_2895866_+\|transposase	transposase	A0A2I7SC00	Paenibacillus_phage	2.2e-31	93.8
WP_149867748.1\|2896226_2896628_+	hypothetical protein	D2XR29	Bacillus_phage	3.3e-21	45.1
WP_036655919.1\|2897351_2897798_+	hypothetical protein	NA	NA	NA	NA
WP_077996665.1\|2898875_2899559_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	6.9e-120	97.8
WP_077996666.1\|2900132_2901407_+	hypothetical protein	NA	NA	NA	NA
WP_077996667.1\|2905573_2906545_+	hypothetical protein	A0A2I7SCU7	Paenibacillus_phage	2.9e-143	78.9
WP_077996668.1\|2906604_2907624_+	hypothetical protein	A0A2I7SDE4	Paenibacillus_phage	1.9e-60	61.5
WP_077996669.1\|2907640_2908048_+	hypothetical protein	NA	NA	NA	NA
WP_104932629.1\|2908404_2909521_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	2.1e-153	99.3
WP_158672710.1\|2909775_2910819_-	glycosyltransferase	NA	NA	NA	NA
WP_077996671.1\|2911154_2911565_+	YjdF family protein	NA	NA	NA	NA
WP_023484396.1\|2911692_2912118_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_079940510.1\|2912360_2913035_+	MFS transporter	NA	NA	NA	NA
WP_077996673.1\|2913035_2913500_+	hypothetical protein	NA	NA	NA	NA
WP_023484400.1\|2914563_2914992_+	3'-5' exonuclease	A2I2Z6	Vibrio_virus	8.4e-23	54.8
WP_051427985.1\|2915090_2915573_+	hypothetical protein	NA	NA	NA	NA
WP_077997618.1\|2916221_2916419_-\|transposase	transposase	NA	NA	NA	NA
WP_077996674.1\|2918426_2920547_+	BglG family transcription antiterminator	NA	NA	NA	NA
WP_023485400.1\|2920590_2921031_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_023485401.1\|2921032_2922181_+	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
WP_077996675.1\|2922848_2923916_+	hypothetical protein	NA	NA	NA	NA
WP_155121070.1\|2924177_2924342_+	hypothetical protein	NA	NA	NA	NA
WP_149867749.1\|2924640_2925543_+	hypothetical protein	NA	NA	NA	NA
WP_077996677.1\|2925920_2926172_+	hypothetical protein	NA	NA	NA	NA
WP_077996678.1\|2926192_2926429_+	hypothetical protein	NA	NA	NA	NA
WP_104932636.1\|2926974_2927163_+\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	1.9e-11	62.5

DBSCAN-SWA_16

2979643 : 3039462

Paenibacillus_phage(37.5%)

tRNA,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023484860.1\|2979643_2980369_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_023484862.1\|2982133_2983372_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_023484863.1\|2983638_2984139_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.4e-15	32.9
WP_023484864.1\|2984184_2984385_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_023484865.1\|2984424_2984784_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_077996712.1\|2985272_2987018_+	biosynthetic-type acetolactate synthase large subunit	G8DDL3	Micromonas_pusilla_virus	3.3e-65	31.0
WP_077996713.1\|2987017_2987509_+	acetolactate synthase small subunit	NA	NA	NA	NA
WP_077996714.1\|2987741_2988731_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_077996715.1\|2988765_2990313_+	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	1.1e-08	40.2
WP_024095284.1\|2990402_2990636_-	hypothetical protein	NA	NA	NA	NA
WP_077996716.1\|2990648_2991176_-	stage II sporulation protein M	NA	NA	NA	NA
WP_077996717.1\|2991172_2991874_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-18	29.2
WP_149867754.1\|2991866_2992904_-	hypothetical protein	NA	NA	NA	NA
WP_077995249.1\|2993249_2994470_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077996720.1\|2994974_2995310_-\|bacteriocin	uberolysin/carnocyclin family circular bacteriocin	NA	NA	NA	NA
WP_024095277.1\|2997578_2998124_+	peroxiredoxin	NA	NA	NA	NA
WP_077997624.1\|2998271_2998664_+	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_024095275.1\|3000716_3000917_-	KTSC domain-containing protein	NA	NA	NA	NA
WP_024095273.1\|3001104_3001530_+	hypothetical protein	NA	NA	NA	NA
WP_104932657.1\|3001644_3002514_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_036654509.1\|3002534_3003218_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_036654509.1\|3003554_3004238_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|3004258_3005128_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_023484880.1\|3005234_3006215_-	hypothetical protein	NA	NA	NA	NA
WP_077996722.1\|3006412_3007231_+	RNA polymerase sigma factor SigI	NA	NA	NA	NA
WP_077996723.1\|3007223_3008336_+	anti-sigma factor domain-containing protein	NA	NA	NA	NA
WP_077996724.1\|3008548_3009454_+	PAS-domain containing protein	NA	NA	NA	NA
WP_104932621.1\|3009525_3010395_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|3010415_3011099_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077996725.1\|3011218_3011668_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_052337463.1\|3011808_3012348_-	hypothetical protein	NA	NA	NA	NA
WP_077996726.1\|3014170_3015526_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	E3SN07	Prochlorococcus_phage	5.3e-55	38.1
WP_077996727.1\|3015566_3016673_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA
WP_024095265.1\|3017289_3017679_+	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_023484889.1\|3017900_3018335_+	universal stress protein	NA	NA	NA	NA
WP_077996728.1\|3018947_3019904_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.3e-121	64.0
WP_023484892.1\|3019958_3020444_+	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	1.1e-31	42.5
WP_077996729.1\|3020512_3020821_+	metal-sensitive transcriptional regulator	NA	NA	NA	NA
WP_023484894.1\|3020841_3021042_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	6.3e-05	40.0
WP_077997625.1\|3023617_3024241_-	YcnI family protein	NA	NA	NA	NA
WP_023484897.1\|3024330_3025008_-	response regulator transcription factor	NA	NA	NA	NA
WP_036657484.1\|3025004_3025811_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_077996730.1\|3025957_3026341_-	hypothetical protein	NA	NA	NA	NA
WP_077996732.1\|3027064_3027349_+	hypothetical protein	NA	NA	NA	NA
WP_077996733.1\|3027521_3029207_+	copper resistance protein CopC	NA	NA	NA	NA
WP_077996734.1\|3029516_3029873_+	hypothetical protein	NA	NA	NA	NA
WP_077996735.1\|3030099_3030762_-	hypothetical protein	NA	NA	NA	NA
WP_077996736.1\|3031075_3031270_+	helix-turn-helix transcriptional regulator	A0A139ZPI6	Marinitoga_camini_virus	8.0e-05	37.3
WP_024095256.1\|3031669_3032371_-	iron-sulfur cluster repair di-iron protein	NA	NA	NA	NA
WP_077996738.1\|3032728_3033961_+	FprA family A-type flavoprotein	NA	NA	NA	NA
WP_077996739.1\|3033985_3035224_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_024095255.1\|3035361_3035526_+	rubredoxin	NA	NA	NA	NA
WP_077996740.1\|3035597_3036305_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_077996741.1\|3036580_3037234_-	hypothetical protein	NA	NA	NA	NA
WP_077996742.1\|3037350_3038532_-	DUF418 domain-containing protein	NA	NA	NA	NA
WP_149867755.1\|3038696_3038882_+	hypothetical protein	NA	NA	NA	NA
WP_077996743.1\|3039339_3039462_-\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

3168450 : 3259253

109

Paenibacillus_phage(71.83%)

transposase,terminase,head,holin,integrase,tail,portal,protease,capsid

attL 3173634:3173693|attR 3241407:3243128

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077995397.1\|3168450_3169674_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
WP_023485364.1\|3171448_3171820_+	DUF423 domain-containing protein	NA	NA	NA	NA
WP_023485363.1\|3171896_3173408_+	PAS domain S-box protein	NA	NA	NA	NA
WP_077996802.1\|3173431_3173668_+	hypothetical protein	NA	NA	NA	NA
3173634:3173693	attL	NA	NA	NA	NA
WP_036654509.1\|3173702_3174386_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|3174406_3175276_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077996804.1\|3175474_3175891_-	hypothetical protein	NA	NA	NA	NA
WP_077996805.1\|3176155_3176467_+	DUF1805 domain-containing protein	NA	NA	NA	NA
WP_077996806.1\|3176453_3176819_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077996807.1\|3176865_3177507_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_077996808.1\|3177642_3178749_-	S-methyl-5-thioribose-1-phosphate isomerase	NA	NA	NA	NA
WP_077996809.1\|3178768_3179998_-	S-methyl-5-thioribose kinase	NA	NA	NA	NA
WP_024093280.1\|3180216_3180666_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	8.5e-42	61.3
WP_077996810.1\|3180837_3181410_+	DUF1802 family protein	NA	NA	NA	NA
WP_077996811.1\|3181590_3182424_+	Fe-S cluster assembly ATPase SufC	W8CYL7	Bacillus_phage	2.2e-06	25.3
WP_024093282.1\|3182491_3183787_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_077996812.1\|3183783_3185010_+	cysteine desulfurase	Q2XUY6	environmental_halophage	2.5e-112	46.5
WP_023485352.1\|3184996_3185434_+	SUF system NifU family Fe-S cluster assembly protein	A0A218MKD1	uncultured_virus	1.1e-12	31.2
WP_023485351.1\|3185458_3186856_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_077997632.1\|3186937_3188104_-\|integrase	site-specific integrase	S5MBZ0	Brevibacillus_phage	3.6e-60	37.2
WP_077996813.1\|3188186_3188819_-	helix-turn-helix domain-containing protein	A0A1B2APZ3	Phage_Wrath	3.2e-79	67.6
WP_077996814.1\|3188971_3189220_+	helix-turn-helix transcriptional regulator	A0A1B2APZ4	Phage_Wrath	4.6e-21	68.0
WP_077997633.1\|3189253_3189526_+	group-specific protein	A0A1B1P7U4	Bacillus_phage	1.8e-23	57.1
WP_077996815.1\|3189610_3189865_+	hypothetical protein	A0A0C5AER7	Bacteriophage	1.3e-34	91.5
WP_077996816.1\|3189861_3190233_+	hypothetical protein	R9VW30	Paenibacillus_phage	8.5e-56	90.0
WP_077996817.1\|3190229_3190454_+	hypothetical protein	A0A0K2CZE0	Paenibacillus_phage	7.8e-20	72.5
WP_158672717.1\|3190450_3190621_+	hypothetical protein	A0A0K2CZS8	Paenibacillus_phage	8.2e-22	92.0
WP_077996818.1\|3190625_3190814_+	hypothetical protein	NA	NA	NA	NA
WP_077996819.1\|3190810_3191488_+	ORF6N domain-containing protein	A0A2I7SCV5	Paenibacillus_phage	1.8e-59	84.5
WP_077996820.1\|3191502_3191766_+	hypothetical protein	A0A0C5AFB6	Paenibacillus_phage	5.7e-30	70.1
WP_155121034.1\|3191944_3192112_+	hypothetical protein	NA	NA	NA	NA
WP_077996821.1\|3192200_3193091_+	hypothetical protein	A0A0A7S0A9	Clostridium_phage	6.8e-83	57.8
WP_077996822.1\|3193053_3193857_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A0P0IZH9	Lactobacillus_phage	5.4e-47	40.0
WP_077996823.1\|3193906_3194308_+	single-stranded DNA-binding protein	A0A0K2CYR2	Paenibacillus_phage	3.9e-46	73.5
WP_077996824.1\|3194332_3194665_+	hypothetical protein	A0A0K2CY25	Paenibacillus_phage	1.6e-53	92.7
WP_077996825.1\|3194713_3195604_+	DnaD domain protein	A0A0K2CY85	Paenibacillus_phage	2.7e-124	86.5
WP_077997634.1\|3195494_3196316_+	ATP-binding protein	A0A0K2CYY7	Paenibacillus_phage	8.6e-117	96.8
WP_077996826.1\|3196433_3196664_+	hypothetical protein	A0A0K2CYJ0	Paenibacillus_phage	9.7e-34	98.6
WP_077996827.1\|3196644_3197166_+	Holliday junction resolvase RecU	R9TMF8	Paenibacillus_phage	1.5e-50	53.5
WP_077996828.1\|3197347_3197578_+	hypothetical protein	R9TMG2	Paenibacillus_phage	6.1e-20	66.2
WP_077996830.1\|3198138_3198507_+	hypothetical protein	R9W0Q6	Paenibacillus_phage	1.4e-13	77.3
WP_077996831.1\|3198513_3198747_+	hypothetical protein	A0A0K2CYJ4	Paenibacillus_phage	1.7e-14	69.8
WP_158672718.1\|3198739_3199150_+	hypothetical protein	A8ASP1	Listeria_phage	8.9e-14	39.4
WP_077996833.1\|3199139_3199376_+	hypothetical protein	NA	NA	NA	NA
WP_077996834.1\|3199403_3199841_+	transcriptional regulator	A0A0K2CYZ6	Paenibacillus_phage	2.5e-70	95.9
WP_077996835.1\|3200046_3200388_+	YxeA family protein	A0A0K2CYS5	Paenibacillus_phage	8.4e-58	100.0
WP_077996836.1\|3200398_3201862_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-123	49.1
WP_104932795.1\|3202003_3202303_+	DUF3310 domain-containing protein	E5DV94	Deep-sea_thermophilic_phage	4.8e-09	42.9
WP_077996839.1\|3202483_3202798_+	hypothetical protein	A0A0K2CZ01	Paenibacillus_phage	8.3e-44	86.5
WP_077996840.1\|3202784_3203126_+	HNH endonuclease	A0A0K2CYS9	Paenibacillus_phage	4.4e-59	98.2
WP_077996841.1\|3203259_3203577_+\|terminase	phage terminase small subunit P27 family	A0A0C5AMZ2	Paenibacillus_phage	1.7e-44	89.5
WP_077996842.1\|3203551_3205285_+\|terminase	terminase large subunit	A0A0K2CZH9	Paenibacillus_phage	1.1e-214	63.5
WP_077996843.1\|3205303_3206563_+\|portal	phage portal protein	A0A0A7RUE7	Clostridium_phage	4.9e-18	22.9
WP_158676621.1\|3206519_3207101_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	4.4e-14	34.0
WP_158672719.1\|3207112_3208297_+\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_158672720.1\|3208298_3208595_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J6E5	uncultured_Caudovirales_phage	2.9e-14	40.7
WP_158672721.1\|3208572_3208890_+\|head	phage head closure protein	A0A0C5AE87	Paenibacillus_phage	2.2e-52	92.4
WP_077996848.1\|3208889_3209318_+	hypothetical protein	A0A0C5AJ13	Paenibacillus_phage	3.0e-68	94.4
WP_188318556.1\|3209343_3209697_+	DUF3168 domain-containing protein	A0A0C5AEH4	Paenibacillus_phage	1.8e-47	82.1
WP_077996850.1\|3209698_3210133_+\|tail	phage major tail protein, TP901-1 family	A0A2I7SCY9	Paenibacillus_phage	2.0e-72	95.8
WP_077996851.1\|3210132_3210477_+	hypothetical protein	R9VWU7	Paenibacillus_phage	1.0e-23	50.9
WP_077996852.1\|3210436_3210751_+	hypothetical protein	A0A0C5AE91	Paenibacillus_phage	1.2e-26	69.0
WP_077996853.1\|3210805_3213442_+\|tail	phage tail tape measure protein	A0A0C5AJ16	Paenibacillus_phage	8.0e-249	95.9
WP_158672724.1\|3213438_3214314_+\|tail	phage tail family protein	A0A0C5AEI0	Paenibacillus_phage	5.0e-70	46.0
WP_158672725.1\|3214316_3215447_+	siphovirus ReqiPepy6 Gp37-like family protein	A0A0K2CZQ1	Paenibacillus_phage	1.7e-59	33.8
WP_077996856.1\|3215451_3216639_+	hypothetical protein	E2ELJ8	Clostridium_phage	8.8e-54	48.7
WP_188318557.1\|3216707_3217418_+	hypothetical protein	NA	NA	NA	NA
WP_077996857.1\|3217430_3217616_+	hypothetical protein	NA	NA	NA	NA
WP_077996858.1\|3217633_3217816_+	hypothetical protein	NA	NA	NA	NA
WP_158672726.1\|3217808_3217964_+	hypothetical protein	NA	NA	NA	NA
WP_024094415.1\|3218004_3218244_+	hypothetical protein	R9W0N4	Paenibacillus_phage	2.8e-36	100.0
WP_077996859.1\|3219187_3219430_+\|transposase	transposase	A0A0C5AN23	Paenibacillus_phage	4.3e-32	93.8
WP_104932634.1\|3220691_3221561_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|3221581_3222265_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077996860.1\|3222692_3223286_-	hypothetical protein	NA	NA	NA	NA
WP_077996861.1\|3223528_3224131_+	hypothetical protein	NA	NA	NA	NA
WP_077996863.1\|3224484_3224886_+	hypothetical protein	NA	NA	NA	NA
WP_155121080.1\|3224872_3225013_+	hypothetical protein	NA	NA	NA	NA
WP_077996864.1\|3225162_3226032_+	hypothetical protein	A0A2I7SC02	Paenibacillus_phage	1.3e-09	45.3
WP_024093293.1\|3226294_3226534_+	hypothetical protein	R9W0N4	Paenibacillus_phage	4.1e-35	96.2
WP_077996865.1\|3227281_3227527_+\|transposase	transposase	A0A2I7SC00	Paenibacillus_phage	2.8e-31	88.9
WP_077996866.1\|3227713_3229111_-	metallophosphoesterase	NA	NA	NA	NA
WP_104935363.1\|3230143_3232747_+	RICIN domain-containing protein	A0A0K2CYN4	Paenibacillus_phage	4.6e-265	56.8
WP_077996868.1\|3233522_3235085_+	peptidase M4 family protein	NA	NA	NA	NA
WP_036654509.1\|3235454_3236138_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_149867761.1\|3236158_3236863_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	4.7e-103	100.0
WP_077996870.1\|3236859_3237027_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.1e-23	100.0
WP_077996871.1\|3237491_3237656_+	hypothetical protein	NA	NA	NA	NA
WP_077996872.1\|3238948_3239569_+	hypothetical protein	NA	NA	NA	NA
WP_104932621.1\|3239823_3240693_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|3240713_3241397_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_188318558.1\|3241487_3242717_+	MFS transporter	D0R099	Streptococcus_phage	3.4e-08	22.6
WP_077996875.1\|3244404_3245037_+	hypothetical protein	NA	NA	NA	NA
3241407:3243128	attR	NA	NA	NA	NA
WP_104932796.1\|3245130_3245277_+\|holin	putative holin-like toxin	A0A0K2CYN9	Paenibacillus_phage	2.8e-18	100.0
WP_077997637.1\|3247905_3248943_+	amidinotransferase	NA	NA	NA	NA
WP_077996877.1\|3249369_3249570_+	hypothetical protein	NA	NA	NA	NA
WP_158672728.1\|3250132_3250333_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	3.1e-12	52.4
WP_155121082.1\|3250434_3250608_+	hypothetical protein	A0A0C5AMZ7	Paenibacillus_phage	7.1e-13	90.7
WP_077996879.1\|3250651_3250906_+	hypothetical protein	A0A2I7SDE4	Paenibacillus_phage	9.4e-22	86.4
WP_077996880.1\|3251051_3251459_+	hypothetical protein	A0A2I7SDE8	Paenibacillus_phage	3.4e-66	94.0
WP_077995249.1\|3251803_3253024_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077996881.1\|3254101_3254290_-	hypothetical protein	A0A2I7SC09	Paenibacillus_phage	9.1e-22	78.7
WP_077996882.1\|3255107_3255512_-	hypothetical protein	NA	NA	NA	NA
WP_077996883.1\|3255493_3255790_-	hypothetical protein	NA	NA	NA	NA
WP_155121084.1\|3256326_3256491_-	hypothetical protein	NA	NA	NA	NA
WP_077996884.1\|3256725_3257661_+	hypothetical protein	NA	NA	NA	NA
WP_077996885.1\|3257684_3258074_+	hypothetical protein	NA	NA	NA	NA
WP_155121085.1\|3258070_3258208_+	hypothetical protein	NA	NA	NA	NA
WP_024093300.1\|3258926_3259253_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_18

3270610 : 3326235

Paenibacillus_phage(43.75%)

coat,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932652.1\|3270610_3271474_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	2.8e-134	98.3
WP_077996122.1\|3271496_3272180_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.7e-118	96.9
WP_077585196.1\|3272360_3272573_+\|coat	spore coat associated protein CotJA	NA	NA	NA	NA
WP_024093310.1\|3272845_3273112_+\|coat	spore coat protein CotJB	NA	NA	NA	NA
WP_040932682.1\|3273153_3273723_+	manganese catalase family protein	NA	NA	NA	NA
WP_077996892.1\|3274115_3274412_+	hypothetical protein	A0A0K2CZ50	Paenibacillus_phage	3.5e-12	70.6
WP_023484389.1\|3274641_3275547_+	hypothetical protein	NA	NA	NA	NA
WP_158225767.1\|3275669_3275804_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_024093313.1\|3276750_3276948_+	hypothetical protein	NA	NA	NA	NA
WP_077996893.1\|3277643_3278249_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	6.1e-51	52.5
WP_077996894.1\|3278380_3278875_+	hypothetical protein	NA	NA	NA	NA
WP_036657847.1\|3279112_3279502_+	hypothetical protein	NA	NA	NA	NA
WP_036654509.1\|3279666_3280350_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|3280370_3281240_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077996895.1\|3281631_3282180_+	hypothetical protein	NA	NA	NA	NA
WP_077996896.1\|3282206_3282461_+	hypothetical protein	NA	NA	NA	NA
WP_077996897.1\|3282865_3285181_+	cation-translocating P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	4.9e-32	24.7
WP_023483454.1\|3285958_3286627_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_077996898.1\|3286912_3288565_+	mannitol dehydrogenase family protein	NA	NA	NA	NA
WP_077996899.1\|3288555_3289626_+	mannonate dehydratase	NA	NA	NA	NA
WP_077996900.1\|3291250_3292645_+	glucuronate isomerase	NA	NA	NA	NA
WP_023483448.1\|3292710_3293361_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_077996901.1\|3293362_3294367_+	sugar kinase	NA	NA	NA	NA
WP_158672833.1\|3294340_3294472_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077996902.1\|3294570_3296403_+	BglG family transcription antiterminator	NA	NA	NA	NA
WP_077996903.1\|3296422_3297301_+	ketose-bisphosphate aldolase	NA	NA	NA	NA
WP_077996904.1\|3299239_3299704_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_036658101.1\|3299733_3300048_+	PTS fructose transporter subunit IIB	NA	NA	NA	NA
WP_104932653.1\|3300056_3301157_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA
WP_077996906.1\|3301537_3303067_-	glycosyltransferase	A0A0N7G7L1	Chrysochromulina_ericina_virus	5.9e-42	32.4
WP_077996907.1\|3303284_3304151_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.1e-08	31.4
WP_077996908.1\|3304266_3305406_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_077996909.1\|3305402_3306044_+	acetyltransferase	NA	NA	NA	NA
WP_077996910.1\|3306061_3306784_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_077996911.1\|3307178_3307817_-	hemolysin III family protein	NA	NA	NA	NA
WP_036656232.1\|3310017_3310296_-	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	7.2e-07	38.3
WP_023483458.1\|3310396_3310603_-	cold-shock protein	Q9AZD3	Lactococcus_phage	4.6e-19	64.6
WP_077997638.1\|3312188_3314036_-	hypothetical protein	NA	NA	NA	NA
WP_155121046.1\|3315068_3315212_+	hypothetical protein	NA	NA	NA	NA
WP_104932654.1\|3315602_3316720_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	2.4e-154	100.0
WP_155116254.1\|3316994_3317138_+	hypothetical protein	NA	NA	NA	NA
WP_077996914.1\|3318037_3318478_+	hypothetical protein	NA	NA	NA	NA
WP_077996916.1\|3318853_3319312_-	sugar nucleotide-binding protein	NA	NA	NA	NA
WP_077996917.1\|3320275_3320998_-	NTP transferase domain-containing protein	H9NC64	Sphingomonas_phage	7.8e-45	40.6
WP_158672730.1\|3321242_3321425_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_188318660.1\|3322091_3322901_+	hypothetical protein	A0A024B055	Bacillus_phage	3.3e-12	43.6
WP_077997639.1\|3323205_3324087_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_188318661.1\|3324791_3325520_+	C40 family peptidase	D2KRB9	Lactobacillus_phage	1.6e-10	33.0
WP_023484075.1\|3325836_3326235_+\|holin	phage holin family protein	A0A0N7GFE6	Paenibacillus_phage	1.1e-21	43.5

DBSCAN-SWA_19

3396285 : 3499050

102

Brevibacillus_phage(23.33%)

tRNA,transposase,bacteriocin,tail,portal,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077585079.1\|3396285_3396441_-\|transposase	transposase	NA	NA	NA	NA
WP_077996959.1\|3396823_3397228_-	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_023483403.1\|3399100_3399745_+	KinB-signaling pathway activation protein	NA	NA	NA	NA
WP_024095116.1\|3403499_3404360_+	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	4.2e-21	30.4
WP_024095115.1\|3404427_3405126_+	sporulation membrane protein YtaF	NA	NA	NA	NA
WP_023483398.1\|3405165_3405762_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_077996960.1\|3405763_3406312_+	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	8.9e-17	38.1
WP_024095113.1\|3406418_3406649_-	alpha/beta-type small acid-soluble spore protein	A0A217EQS5	Bacillus_phage	1.6e-07	41.8
WP_024095112.1\|3406761_3407232_+	transcriptional regulator NrdR	NA	NA	NA	NA
WP_077996961.1\|3410841_3411138_+	SIS domain-containing protein	NA	NA	NA	NA
WP_077996962.1\|3411288_3412152_+	PRD domain-containing protein	NA	NA	NA	NA
WP_077996963.1\|3412316_3412802_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_077996964.1\|3412843_3414298_+	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	2.7e-12	45.2
WP_077996965.1\|3414526_3416266_+	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	3.8e-13	26.8
WP_172422976.1\|3417211_3419833_+	hypothetical protein	A0A1V0E026	Clostridioides_phage	3.1e-99	33.3
WP_036655218.1\|3419855_3420149_+	hypothetical protein	NA	NA	NA	NA
WP_077996967.1\|3420357_3420903_-	DUF3967 domain-containing protein	NA	NA	NA	NA
WP_036655213.1\|3421189_3422206_-	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
WP_024095101.1\|3422419_3422986_-	biotin transporter BioY	NA	NA	NA	NA
WP_149867766.1\|3423089_3423941_+	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	1.3e-06	27.1
WP_077996969.1\|3423924_3425589_+	ATP-binding cassette domain-containing protein	A0A2R8FG22	Brazilian_cedratvirus	3.8e-10	27.3
WP_104932621.1\|3425692_3426562_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|3426582_3427266_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_023483383.1\|3427371_3428562_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_077996970.1\|3428710_3428974_+	hypothetical protein	NA	NA	NA	NA
WP_042119273.1\|3429322_3430111_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_077996971.1\|3430217_3431807_+	OPT/YSL family transporter	NA	NA	NA	NA
WP_024095092.1\|3432902_3433841_+	DUF1177 domain-containing protein	NA	NA	NA	NA
WP_077997644.1\|3433923_3434586_+	AroM family protein	NA	NA	NA	NA
WP_077996972.1\|3435681_3435939_+	hypothetical protein	NA	NA	NA	NA
WP_077996973.1\|3436471_3436783_+	hypothetical protein	F8WQ63	Bacillus_phage	4.4e-13	46.7
WP_077996974.1\|3437147_3439478_+	DUF1906 domain-containing protein	NA	NA	NA	NA
WP_077996975.1\|3439538_3440396_-	hypothetical protein	NA	NA	NA	NA
WP_077996976.1\|3440804_3441116_-	hypothetical protein	NA	NA	NA	NA
WP_024095080.1\|3441265_3441427_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_024095079.1\|3441889_3442147_+	hypothetical protein	NA	NA	NA	NA
WP_023482424.1\|3442256_3443312_+	nucleoid-associated protein	A0A0A8WF33	Clostridium_phage	6.3e-11	25.0
WP_077996977.1\|3443326_3444064_+	hypothetical protein	NA	NA	NA	NA
WP_077996978.1\|3444168_3444807_+	hypothetical protein	NA	NA	NA	NA
WP_077996979.1\|3444859_3445336_+	hypothetical protein	NA	NA	NA	NA
WP_077997645.1\|3445653_3446016_-	ImmA/IrrE family metallo-endopeptidase	A0A2P1JU12	Anoxybacillus_phage	7.9e-14	40.7
WP_077996980.1\|3446116_3446572_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023482429.1\|3448508_3448937_+	hypothetical protein	NA	NA	NA	NA
WP_077996983.1\|3448911_3449094_+	hypothetical protein	NA	NA	NA	NA
WP_077996984.1\|3449094_3450429_+\|tail	phage tail sheath family protein	A0A0A7S087	Clostridium_phage	1.7e-109	46.4
WP_077996985.1\|3450430_3450892_+\|tail	phage tail tube protein	A0A0A7RVP1	Clostridium_phage	2.1e-48	60.3
WP_077996986.1\|3450911_3451334_+\|portal	phage portal protein	X5JAB6	Clostridium_phage	4.4e-24	41.8
WP_149867767.1\|3451705_3451957_+	hypothetical protein	NA	NA	NA	NA
WP_077996988.1\|3451953_3453750_+	hypothetical protein	A0A0K2CP22	Brevibacillus_phage	1.5e-126	42.1
WP_077996989.1\|3453749_3454259_+	hypothetical protein	S5MUH0	Brevibacillus_phage	8.4e-38	47.8
WP_149867768.1\|3454255_3454390_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_077996990.1\|3454394_3455363_+	hypothetical protein	S5MNC9	Brevibacillus_phage	1.7e-111	59.8
WP_077996991.1\|3455362_3455650_+	DUF2577 domain-containing protein	S5MC71	Brevibacillus_phage	1.5e-15	39.3
WP_077996992.1\|3455652_3456075_+	DUF2634 domain-containing protein	A0A0A7RTU4	Clostridium_phage	2.5e-27	48.5
WP_077997646.1\|3457132_3457702_+	DUF2313 domain-containing protein	S5MA71	Brevibacillus_phage	2.7e-32	42.3
WP_077996993.1\|3457698_3457977_+	hypothetical protein	NA	NA	NA	NA
WP_077996994.1\|3457980_3459753_+	hypothetical protein	S5MNY5	Brevibacillus_phage	3.2e-15	45.2
WP_077996995.1\|3459765_3460161_+	hypothetical protein	NA	NA	NA	NA
WP_155121041.1\|3460153_3460312_+	hypothetical protein	NA	NA	NA	NA
WP_077996996.1\|3460350_3460590_+\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	6.3e-36	98.7
WP_104932656.1\|3461510_3461741_+\|transposase	transposase	A0A2I7SC00	Paenibacillus_phage	3.9e-27	100.0
WP_155121040.1\|3461887_3462055_+	hypothetical protein	A0A0K2CZ50	Paenibacillus_phage	6.2e-06	78.1
WP_077996997.1\|3463500_3464523_+	lactate dehydrogenase	A0A1V0SBV6	Catovirus	6.3e-16	28.5
WP_077996998.1\|3464704_3464911_+	hypothetical protein	NA	NA	NA	NA
WP_077995249.1\|3465039_3466260_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_158672732.1\|3466472_3467744_-	hypothetical protein	NA	NA	NA	NA
WP_077997000.1\|3468425_3468773_+	YolD-like family protein	NA	NA	NA	NA
WP_077997648.1\|3468823_3469168_-	DUF2512 family protein	NA	NA	NA	NA
WP_023484507.1\|3469352_3469556_+\|coat	spore coat-like protein	NA	NA	NA	NA
WP_024093574.1\|3469574_3469877_+\|coat	spore coat protein	NA	NA	NA	NA
WP_023484509.1\|3470703_3471843_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_077997001.1\|3472027_3472381_+	BMC domain-containing protein	NA	NA	NA	NA
WP_023484510.1\|3472392_3472824_+	EutP/PduV family microcompartment system protein	NA	NA	NA	NA
WP_036655167.1\|3473058_3473631_+	ANTAR domain-containing response regulator	NA	NA	NA	NA
WP_077997002.1\|3473623_3475048_+	sensor histidine kinase	NA	NA	NA	NA
WP_077997003.1\|3475189_3476620_+	ethanolamine ammonia-lyase reactivating factor EutA	NA	NA	NA	NA
WP_077997004.1\|3476649_3478014_+	ethanolamine ammonia-lyase subunit EutB	NA	NA	NA	NA
WP_077997005.1\|3478035_3478986_+	ethanolamine ammonia-lyase subunit EutC	NA	NA	NA	NA
WP_023484516.1\|3479004_3479658_+	ethanolamine utilization microcompartment protein EutL	NA	NA	NA	NA
WP_077997006.1\|3479669_3480410_+	BMC domain-containing protein	NA	NA	NA	NA
WP_077997007.1\|3480560_3482024_+	acetaldehyde dehydrogenase (acetylating)	NA	NA	NA	NA
WP_036655161.1\|3482073_3482361_+	BMC domain-containing protein	NA	NA	NA	NA
WP_077997008.1\|3482505_3483333_+	cobalamin adenosyltransferase	NA	NA	NA	NA
WP_077997009.1\|3483344_3483983_+	phosphate propanoyltransferase	NA	NA	NA	NA
WP_024093587.1\|3484001_3484685_+	putative ethanolamine utilization protein	NA	NA	NA	NA
WP_036655159.1\|3484697_3484970_+	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_036655157.1\|3484962_3485508_+	BMC domain-containing protein	NA	NA	NA	NA
WP_077997010.1\|3485527_3486643_+	ethanolamine utilization protein EutH	NA	NA	NA	NA
WP_077997011.1\|3486981_3487833_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_024093592.1\|3487960_3488125_-	hypothetical protein	NA	NA	NA	NA
WP_024093593.1\|3488172_3488334_-	hypothetical protein	NA	NA	NA	NA
WP_036655155.1\|3489269_3489464_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077997012.1\|3489797_3490265_+	hypothetical protein	A0A0K2CP77	Brevibacillus_phage	3.5e-22	30.5
WP_144029556.1\|3491190_3491493_+	hypothetical protein	NA	NA	NA	NA
WP_077997013.1\|3491509_3492034_+	VanZ family protein	NA	NA	NA	NA
WP_077997014.1\|3492103_3492517_+	hypothetical protein	NA	NA	NA	NA
WP_077997015.1\|3492789_3493092_-	hypothetical protein	NA	NA	NA	NA
WP_077997016.1\|3493476_3493914_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_077997017.1\|3494502_3495558_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1P8DJG9	Virus_Rctr71	1.7e-16	30.5
WP_077997019.1\|3495954_3496593_+	transcriptional regulator	NA	NA	NA	NA
WP_077997020.1\|3496881_3497943_+	selenide, water dikinase SelD	NA	NA	NA	NA
WP_077997021.1\|3497997_3499050_+\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA

DBSCAN-SWA_20

3633965 : 3704412

Paenibacillus_phage(42.11%)

transposase,protease,holin,integrase

attL 3633193:3633252|attR 3702770:3704491

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3633193:3633252	attL	NA	NA	NA	NA
WP_104932621.1\|3633965_3634835_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077997100.1\|3634915_3635431_+	PAS domain-containing protein	NA	NA	NA	NA
WP_077997101.1\|3635759_3636284_+	DUF1572 family protein	NA	NA	NA	NA
WP_077997102.1\|3636471_3637122_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	7.5e-07	29.3
WP_036657973.1\|3637282_3637534_+	YqzE family protein	NA	NA	NA	NA
WP_079940316.1\|3637584_3638598_-	hypothetical protein	NA	NA	NA	NA
WP_077997104.1\|3638719_3639739_-	hypothetical protein	NA	NA	NA	NA
WP_077997651.1\|3641707_3642550_+	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_024094992.1\|3642666_3643515_-	D-amino-acid transaminase	NA	NA	NA	NA
WP_149867772.1\|3647059_3647602_-	hypothetical protein	NA	NA	NA	NA
WP_036657983.1\|3649224_3649404_+	DUF3973 domain-containing protein	NA	NA	NA	NA
WP_077997106.1\|3649967_3650582_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	5.6e-60	55.1
WP_077997107.1\|3651324_3652074_+	J domain-containing protein	NA	NA	NA	NA
WP_077997108.1\|3652628_3653060_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_036657987.1\|3653230_3653893_-	LysM peptidoglycan-binding domain-containing protein	A0A0E3T7R5	Bacillus_phage	1.3e-51	51.9
WP_077997109.1\|3655403_3655799_-	hypothetical protein	NA	NA	NA	NA
WP_158672736.1\|3659813_3660800_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.7e-05	25.7
WP_077995375.1\|3661365_3662589_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077997111.1\|3662772_3663969_+	MFS transporter	NA	NA	NA	NA
WP_077997112.1\|3664871_3665576_-	HD domain-containing protein	NA	NA	NA	NA
WP_023483185.1\|3665771_3666725_+\|integrase	tyrosine-type recombinase/integrase	A0A097BYJ7	Leuconostoc_phage	1.2e-05	26.3
WP_077997113.1\|3668822_3669188_+	hypothetical protein	NA	NA	NA	NA
WP_077997114.1\|3669298_3670081_+	hypothetical protein	NA	NA	NA	NA
WP_077997115.1\|3670121_3670685_-	signal peptidase I	NA	NA	NA	NA
WP_077997116.1\|3670884_3671805_+	nucleoside hydrolase	NA	NA	NA	NA
WP_077997117.1\|3672116_3674240_-	SpoIID/LytB domain-containing protein	Q2XU88	Pseudomonas_phage	3.3e-11	25.5
WP_023483179.1\|3674725_3675640_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	1.8e-70	45.5
WP_024094971.1\|3675666_3677235_+	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_077997118.1\|3677459_3678383_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_077997119.1\|3678568_3679564_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_077997652.1\|3679910_3680423_+	FUSC family protein	NA	NA	NA	NA
WP_077997120.1\|3680521_3681100_-	nitroreductase family protein	NA	NA	NA	NA
WP_077997121.1\|3681251_3682685_-	hypothetical protein	NA	NA	NA	NA
WP_077997122.1\|3682714_3683704_-	glycosyltransferase family 2 protein	B9UDL7	Salmonella_phage	2.4e-49	40.0
WP_158672737.1\|3683991_3684483_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_077997124.1\|3684622_3685252_+	hypothetical protein	NA	NA	NA	NA
WP_077997125.1\|3685248_3686307_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_077997126.1\|3686363_3687302_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.8e-21	29.0
WP_077997127.1\|3687294_3688074_+	ABC transporter permease	NA	NA	NA	NA
WP_077997128.1\|3688261_3689611_+	hypothetical protein	A0A0K2CP77	Brevibacillus_phage	4.1e-71	35.1
WP_155121036.1\|3689614_3689755_+	hypothetical protein	NA	NA	NA	NA
WP_077997129.1\|3689738_3689951_+	hypothetical protein	NA	NA	NA	NA
WP_077997130.1\|3690041_3690569_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_188318565.1\|3691010_3691661_+	HTH domain-containing protein	NA	NA	NA	NA
WP_077997132.1\|3691627_3692968_+	PRD domain-containing protein	NA	NA	NA	NA
WP_077997133.1\|3692960_3694103_+	amidohydrolase/deacetylase family metallohydrolase	NA	NA	NA	NA
WP_024094960.1\|3694081_3694444_+	PRD domain-containing protein	NA	NA	NA	NA
WP_023483163.1\|3694483_3694840_+	glycine-rich SFCGS family protein	NA	NA	NA	NA
WP_158672739.1\|3694843_3695182_+	DUF4312 family protein	NA	NA	NA	NA
WP_036658006.1\|3695202_3695988_+	DUF4311 domain-containing protein	NA	NA	NA	NA
WP_023483159.1\|3696696_3697803_+	DgaE family pyridoxal phosphate-dependent ammonia lyase	NA	NA	NA	NA
WP_023483158.1\|3697806_3698541_+	oxo-acid lyase	NA	NA	NA	NA
WP_024094956.1\|3698770_3698926_-\|integrase	phage integrase family protein	A0A0K2CZ62	Paenibacillus_phage	4.5e-19	88.2
WP_077997135.1\|3698939_3699272_-\|integrase	tyrosine-type recombinase/integrase	A0A0K2CZ62	Paenibacillus_phage	1.0e-44	78.3
WP_149867773.1\|3699293_3699485_-	hypothetical protein	A0A0K2CZ62	Paenibacillus_phage	1.6e-21	76.2
WP_077584997.1\|3699730_3699817_+\|holin	putative holin-like toxin	A0A0K2CZR6	Paenibacillus_phage	2.0e-05	100.0
WP_077997137.1\|3700369_3700585_+	hypothetical protein	NA	NA	NA	NA
WP_077995249.1\|3700643_3701864_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077997138.1\|3702035_3702242_+	hypothetical protein	NA	NA	NA	NA
WP_036654509.1\|3702838_3703522_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|3703542_3704412_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
3702770:3704491	attR	NA	NA	NA	NA

DBSCAN-SWA_21

3821372 : 3828124

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023482600.1\|3821372_3821810_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.6e-21	45.3
WP_023482602.1\|3823869_3824535_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.4e-39	43.3
WP_077997196.1\|3824569_3825802_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	5.6e-112	51.3
WP_024093718.1\|3825833_3826304_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.2e-43	57.9
WP_077997197.1\|3826731_3827514_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.3e-08	33.3
WP_036658393.1\|3827482_3828124_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	8.2e-14	31.9

DBSCAN-SWA_22

3987285 : 4027621

Paenibacillus_phage(77.78%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077995397.1\|3987285_3988509_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
WP_158672748.1\|3988573_3989539_+	hypothetical protein	S5W9C6	Leptospira_phage	1.1e-09	41.5
WP_077997274.1\|3989609_3989978_+	hypothetical protein	NA	NA	NA	NA
WP_077997275.1\|3989974_3990235_+	DUF3885 domain-containing protein	NA	NA	NA	NA
WP_077997276.1\|3990284_3990593_+	hypothetical protein	NA	NA	NA	NA
WP_077997277.1\|3990570_3990897_+	hypothetical protein	NA	NA	NA	NA
WP_149867784.1\|3990976_3991279_+	hypothetical protein	NA	NA	NA	NA
WP_077997661.1\|3991185_3991449_+	hypothetical protein	NA	NA	NA	NA
WP_077997279.1\|3991461_3991767_+	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|3992006_3993230_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077997280.1\|3994139_3994754_+	hypothetical protein	NA	NA	NA	NA
WP_188318571.1\|3994792_3995062_+	RHS repeat protein	NA	NA	NA	NA
WP_077997282.1\|3995058_3995835_+	RHS repeat-associated core domain-containing protein	S5W9C6	Leptospira_phage	3.5e-11	37.2
WP_149867785.1\|3999028_3999328_-	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|3999684_4000908_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077997286.1\|4001508_4001913_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_077997287.1\|4001923_4002655_-	RNA pseudouridine synthase	NA	NA	NA	NA
WP_077997288.1\|4003727_4004744_+	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA
WP_036654509.1\|4004810_4005494_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|4005514_4006384_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077997289.1\|4006500_4007355_+	alpha amylase C-terminal domain-containing protein	NA	NA	NA	NA
WP_077997290.1\|4007351_4008500_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_188318572.1\|4008506_4009028_+	hypothetical protein	NA	NA	NA	NA
WP_188318573.1\|4009024_4009615_+	hypothetical protein	NA	NA	NA	NA
WP_077997291.1\|4009645_4011091_+	glycogen synthase GlgA	NA	NA	NA	NA
WP_024093827.1\|4011565_4011796_+	hypothetical protein	NA	NA	NA	NA
WP_149867786.1\|4012112_4012451_+	hypothetical protein	NA	NA	NA	NA
WP_077997294.1\|4012786_4013362_+	hypothetical protein	NA	NA	NA	NA
WP_077997662.1\|4015213_4016740_-	family 10 glycosylhydrolase	NA	NA	NA	NA
WP_077997296.1\|4018636_4019878_+	arginine deiminase	NA	NA	NA	NA
WP_077997663.1\|4019895_4020894_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_042118868.1\|4022419_4023373_+	carbamate kinase	NA	NA	NA	NA
WP_024093834.1\|4023411_4024098_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_023482955.1\|4024153_4024651_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_077997297.1\|4025085_4025406_+	hypothetical protein	NA	NA	NA	NA
WP_036654509.1\|4025510_4026194_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932634.1\|4026214_4027084_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_023482953.1\|4027195_4027621_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA

DBSCAN-SWA_23

4031962 : 4105663

Paenibacillus_phage(66.67%)

coat,tRNA,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077997664.1\|4031962_4032202_+\|bacteriocin	uberolysin/carnocyclin family circular bacteriocin	NA	NA	NA	NA
WP_077997302.1\|4032526_4034020_+	hypothetical protein	NA	NA	NA	NA
WP_077997303.1\|4034066_4034606_+	stage II sporulation protein M	NA	NA	NA	NA
WP_077997305.1\|4035177_4035846_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.3e-14	28.6
WP_077997665.1\|4036205_4037729_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_077997306.1\|4037825_4038803_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_077997307.1\|4038810_4039821_+	iron ABC transporter permease	NA	NA	NA	NA
WP_077997308.1\|4041186_4042368_+	lytic polysaccharide monooxygenase	A0A0K1Y848	Apis_mellifera_filamentous_virus	7.7e-26	38.9
WP_104932668.1\|4042523_4043641_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	4.6e-153	99.3
WP_077997309.1\|4043753_4044590_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_188318662.1\|4044652_4045495_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_042119509.1\|4049319_4049589_-	DUF2642 domain-containing protein	NA	NA	NA	NA
WP_077997311.1\|4050008_4050575_+	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_077997312.1\|4050571_4050808_+	hypothetical protein	NA	NA	NA	NA
WP_077997313.1\|4050930_4052037_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_077997314.1\|4052378_4055087_+	AAA family ATPase	NA	NA	NA	NA
WP_077997315.1\|4055083_4055353_+	hypothetical protein	NA	NA	NA	NA
WP_077997316.1\|4055386_4055809_-	hypothetical protein	NA	NA	NA	NA
WP_077997317.1\|4057064_4057598_-	hypothetical protein	NA	NA	NA	NA
WP_149867788.1\|4058100_4058853_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077997319.1\|4060219_4060519_-	hypothetical protein	NA	NA	NA	NA
WP_155121090.1\|4060825_4060975_+	hypothetical protein	NA	NA	NA	NA
WP_077997321.1\|4065327_4066164_-	hypothetical protein	NA	NA	NA	NA
WP_077997666.1\|4066893_4067646_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_077997322.1\|4068389_4068755_-	CidA/LrgA family protein	NA	NA	NA	NA
WP_077997323.1\|4070492_4071815_+	CBS domain-containing protein	NA	NA	NA	NA
WP_155121091.1\|4072100_4072262_+	hypothetical protein	NA	NA	NA	NA
WP_077997324.1\|4075375_4076851_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_077997325.1\|4076847_4078020_+	hypothetical protein	NA	NA	NA	NA
WP_149867789.1\|4078070_4078499_+	hypothetical protein	NA	NA	NA	NA
WP_077997328.1\|4079276_4080548_+	immune inhibitor A	NA	NA	NA	NA
WP_077997330.1\|4081690_4081969_-	DUF2653 family protein	NA	NA	NA	NA
WP_023482849.1\|4081968_4082400_-	hypothetical protein	NA	NA	NA	NA
WP_077997331.1\|4083077_4083668_-	carbonic anhydrase	NA	NA	NA	NA
WP_042119138.1\|4083690_4084026_-	hypothetical protein	NA	NA	NA	NA
WP_188318574.1\|4087639_4088026_+	hypothetical protein	NA	NA	NA	NA
WP_023482840.1\|4089822_4090785_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_023482839.1\|4090882_4091452_+\|coat	outer spore coat protein CotE	NA	NA	NA	NA
WP_079940585.1\|4091552_4092983_+	hypothetical protein	NA	NA	NA	NA
WP_036656949.1\|4097909_4098689_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_077997333.1\|4098676_4099639_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_077997334.1\|4099716_4099956_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_077997335.1\|4100104_4101766_+	transglycosylase domain-containing protein	NA	NA	NA	NA
WP_077997336.1\|4101828_4102071_+	hypothetical protein	NA	NA	NA	NA
WP_149867793.1\|4102103_4102535_+	hypothetical protein	NA	NA	NA	NA
WP_077997337.1\|4103442_4103829_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_036654509.1\|4104090_4104774_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077997338.1\|4104944_4105418_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.6e-75	99.3
WP_077997339.1\|4105429_4105663_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	6.6e-38	100.0

DBSCAN-SWA_24

4120712 : 4179939

Paenibacillus_phage(47.37%)

transposase,integrase

attL 4113423:4113439|attR 4185127:4185143

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4113423:4113439	attL	NA	NA	NA	NA
WP_104932621.1\|4120712_4121582_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|4121602_4122286_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_158672752.1\|4123871_4124114_-\|transposase	transposase	NA	NA	NA	NA
WP_158672753.1\|4124022_4124304_-	hypothetical protein	NA	NA	NA	NA
WP_104935368.1\|4124356_4124677_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077997348.1\|4124721_4125048_-\|transposase	transposase	NA	NA	NA	NA
WP_077997349.1\|4125116_4125536_-\|integrase	tyrosine-type recombinase/integrase	A0A0S2SXP1	Bacillus_phage	4.8e-39	61.4
WP_046655237.1\|4125615_4125966_+	hypothetical protein	NA	NA	NA	NA
WP_052337438.1\|4128641_4129733_+	LCP family protein	NA	NA	NA	NA
WP_077997668.1\|4129833_4130064_+	helix-turn-helix transcriptional regulator	A0A0K2CYV5	Paenibacillus_phage	4.4e-10	49.3
WP_024094581.1\|4130560_4130827_+	hypothetical protein	A0A2I7SCW2	Paenibacillus_phage	1.9e-28	72.7
WP_077997351.1\|4130972_4131590_-	transcriptional repressor LexA	E5DV74	Deep-sea_thermophilic_phage	5.3e-18	35.6
WP_036656935.1\|4131868_4132114_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_036654904.1\|4132294_4132480_+	DUF896 domain-containing protein	NA	NA	NA	NA
WP_077997352.1\|4132506_4133301_+	HAD family hydrolase	NA	NA	NA	NA
WP_023484144.1\|4133406_4133949_-	cupin domain-containing protein	NA	NA	NA	NA
WP_149867797.1\|4134225_4137735_+	methionine synthase	A0A140XBC7	Dickeya_phage	5.2e-09	46.7
WP_023484146.1\|4137839_4138796_+	ribonuclease Z	NA	NA	NA	NA
WP_077996122.1\|4141245_4141929_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.7e-118	96.9
WP_077997354.1\|4142019_4142985_-	ETX/MTX2 family pore-forming toxin	A0A2I7SC07	Paenibacillus_phage	9.6e-83	58.2
WP_149867798.1\|4144630_4144840_+	hypothetical protein	A0A0C5AFE4	Paenibacillus_phage	3.4e-17	73.8
WP_077997356.1\|4145195_4147481_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_188318575.1\|4147477_4147705_+	hypothetical protein	NA	NA	NA	NA
WP_188318576.1\|4147701_4148862_+	ribonuclease H-like domain-containing protein	NA	NA	NA	NA
WP_077997358.1\|4149021_4149825_+	Fpg/Nei family DNA glycosylase	W5S5H6	Pithovirus	3.0e-05	23.7
WP_077997359.1\|4149824_4150694_+	deoxyribonuclease IV	A0A1V0SCI4	Indivirus	1.2e-23	28.9
WP_077997360.1\|4150729_4151062_+	cell division protein FtsJ	NA	NA	NA	NA
WP_077997361.1\|4151167_4151872_+	ATP-binding cassette domain-containing protein	F2Y2R6	Organic_Lake_phycodnavirus	2.1e-10	28.5
WP_077997362.1\|4151864_4153028_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_077997363.1\|4153051_4153240_+	FMN-binding protein	NA	NA	NA	NA
WP_077997364.1\|4153283_4153760_-	tryptophan-rich sensory protein	NA	NA	NA	NA
WP_077995375.1\|4154188_4155412_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077997365.1\|4155532_4156618_+	hypothetical protein	NA	NA	NA	NA
WP_023483043.1\|4157855_4158770_+	type II secretion system F family protein	NA	NA	NA	NA
WP_188318577.1\|4158786_4159644_+	type II secretion system F family protein	NA	NA	NA	NA
WP_036654710.1\|4159673_4159892_+	hypothetical protein	NA	NA	NA	NA
WP_051427880.1\|4159960_4160899_+	hypothetical protein	NA	NA	NA	NA
WP_077997366.1\|4160910_4161519_+	hypothetical protein	NA	NA	NA	NA
WP_149867800.1\|4161481_4163152_+	hypothetical protein	NA	NA	NA	NA
WP_023483047.1\|4163121_4163826_+	pilus assembly protein	NA	NA	NA	NA
WP_077997368.1\|4163833_4164349_+	prepilin peptidase	NA	NA	NA	NA
WP_077997369.1\|4164361_4165015_+	hypothetical protein	NA	NA	NA	NA
WP_149867801.1\|4165372_4166101_+	FHA domain-containing protein	NA	NA	NA	NA
WP_077997372.1\|4166240_4167797_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	5.7e-53	28.3
WP_036656764.1\|4167822_4168113_+	Dabb family protein	NA	NA	NA	NA
WP_077997373.1\|4169505_4171419_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.9e-54	29.9
WP_036656763.1\|4171449_4173069_+	ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	2.4e-54	27.9
WP_077997374.1\|4173151_4173397_+	hypothetical protein	NA	NA	NA	NA
WP_149867802.1\|4173378_4173684_+	hypothetical protein	NA	NA	NA	NA
WP_077997376.1\|4173706_4174045_+	thioredoxin family protein	NA	NA	NA	NA
WP_077997377.1\|4174123_4174507_+	kinase-associated lipoprotein B	NA	NA	NA	NA
WP_077997378.1\|4175977_4176625_-	ABC-2 transporter permease	NA	NA	NA	NA
WP_077997379.1\|4176614_4177481_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-19	28.0
WP_077997380.1\|4177477_4177861_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_051427858.1\|4178335_4178518_-	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|4178715_4179939_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
4185127:4185143	attR	NA	NA	NA	NA

DBSCAN-SWA_25

4207703 : 4270475

Streptococcus_phage(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077997391.1\|4207703_4209158_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	3.4e-124	49.1
WP_077995375.1\|4209578_4210802_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_036654468.1\|4210982_4211711_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-34	40.4
WP_077997392.1\|4211732_4212587_+	transporter substrate-binding domain-containing protein	A0A1B1IT51	uncultured_Mediterranean_phage	4.2e-13	28.6
WP_077997393.1\|4212660_4213314_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_023483359.1\|4213383_4213992_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_077997672.1\|4214151_4214862_-	amidohydrolase	NA	NA	NA	NA
WP_077997394.1\|4215262_4215901_-	hemolysin III family protein	NA	NA	NA	NA
WP_077997673.1\|4217394_4218042_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_023482520.1\|4218833_4219679_+	DegV family protein	NA	NA	NA	NA
WP_077997395.1\|4219762_4220602_+	DegV family protein	NA	NA	NA	NA
WP_024093883.1\|4220743_4220935_+	HTH domain-containing protein	NA	NA	NA	NA
WP_155121094.1\|4220994_4221156_+	hypothetical protein	NA	NA	NA	NA
WP_077997397.1\|4221131_4221959_+	PRD domain-containing protein	NA	NA	NA	NA
WP_149867804.1\|4222110_4222470_+	hypothetical protein	NA	NA	NA	NA
WP_077997398.1\|4222445_4222841_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_023482525.1\|4223352_4223850_+	metallophosphoesterase family protein	NA	NA	NA	NA
WP_024093888.1\|4224028_4225534_+	spore germination protein	NA	NA	NA	NA
WP_077997400.1\|4225548_4226646_+	GerAB/ArcD/ProY family transporter	NA	NA	NA	NA
WP_077997401.1\|4226642_4227782_+	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_077997674.1\|4228393_4229689_+	serine dehydratase subunit alpha family protein	NA	NA	NA	NA
WP_077997402.1\|4229740_4231144_+	L-cystine transporter	NA	NA	NA	NA
WP_077997403.1\|4231171_4232506_+	CoA-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	4.7e-11	25.7
WP_077997404.1\|4232948_4233734_+	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	NA	NA	NA	NA
WP_188318578.1\|4233761_4234988_+	isochorismate synthase DhbC	NA	NA	NA	NA
WP_077997406.1\|4235007_4236633_+	(2,3-dihydroxybenzoyl)adenylate synthase	NA	NA	NA	NA
WP_077997407.1\|4236666_4237593_+	isochorismatase family protein	NA	NA	NA	NA
WP_077997408.1\|4244758_4244959_+	MbtH family protein	NA	NA	NA	NA
WP_077997409.1\|4248275_4248554_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_077997410.1\|4248574_4249045_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_077997411.1\|4249077_4249674_+	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA	NA	NA	NA
WP_077997412.1\|4249677_4250559_+	L-ribulose-5-phosphate 3-epimerase	NA	NA	NA	NA
WP_077997675.1\|4250548_4251250_+	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
WP_077997413.1\|4251291_4253490_+	HTH domain-containing protein	NA	NA	NA	NA
WP_077997414.1\|4253848_4255612_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_188318579.1\|4255834_4256026_+	hypothetical protein	NA	NA	NA	NA
WP_077997415.1\|4256932_4257718_-	ParA family protein	A0A1X9I765	Streptococcus_phage	4.5e-14	27.8
WP_077997416.1\|4258933_4261360_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	67.1
WP_077997417.1\|4261476_4261944_+	hypothetical protein	NA	NA	NA	NA
WP_077997418.1\|4262019_4263951_+	hypothetical protein	NA	NA	NA	NA
WP_077997419.1\|4263952_4264174_+	hypothetical protein	NA	NA	NA	NA
WP_077997420.1\|4264533_4265022_+	ATP-binding protein	NA	NA	NA	NA
WP_077997421.1\|4265033_4265417_+	hypothetical protein	NA	NA	NA	NA
WP_077997422.1\|4265428_4266040_+	hypothetical protein	A0A2K9L5M2	Tupanvirus	5.4e-23	36.4
WP_104932677.1\|4266754_4267111_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.4e-09	35.4
WP_158672755.1\|4267340_4267565_-\|transposase	transposase	NA	NA	NA	NA
WP_077997424.1\|4267712_4268912_+	MFS transporter	NA	NA	NA	NA
WP_158672756.1\|4269286_4269592_-\|transposase	transposase	NA	NA	NA	NA
WP_104932679.1\|4269833_4270475_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP019796

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019795

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP019794

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP019796

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection