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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017238 Burkholderia cenocepacia strain CR318 chromosome 1, complete sequence 1 crisprs WYL,cas3,DEDDh,csa3,Cas14u_CAS-V,DinG,cas14j 0 1 6 0
NZ_CP017239 Burkholderia cenocepacia strain CR318 chromosome 2, complete sequence 0 crisprs cas3,csa3,c2c9_V-U4,RT,DinG,Cas14u_CAS-V,cas14j 0 0 1 0
NZ_CP017240 Burkholderia cenocepacia strain CR318 chromosome 3, complete sequence 0 crisprs cas14j,RT 0 0 1 0

Results visualization

1. NZ_CP017238
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017238_1 2314797-2314916 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017238_1 1.1|2314834|46|NZ_CP017238|CRISPRCasFinder 2314834-2314879 46 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 450547-450592 5 0.891

1. spacer 1.1|2314834|46|NZ_CP017238|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.891

aggaaaacgacccccacgctcactgcgttcgctgccccccgcgggg	CRISPR spacer
aatgaaacaacccccacgctcactgcgttcgctgccccccgagggg	Protospacer
*. .****.******************************** ****

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 300718 : 338750 49 Burkholderia_phage(95.56%) holin,portal,plate,capsid,integrase,head,tail,terminase attL 300609:300654|attR 339084:339129
DBSCAN-SWA_2 517240 : 582230 60 uncultured_Mediterranean_phage(33.33%) protease,plate,transposase NA
DBSCAN-SWA_3 903401 : 916516 11 Hokovirus(12.5%) NA NA
DBSCAN-SWA_4 1312180 : 1323979 16 Burkholderia_virus(30.77%) tail,holin NA
DBSCAN-SWA_5 2188745 : 2195055 7 uncultured_Caudovirales_phage(42.86%) tail,holin NA
DBSCAN-SWA_6 2853781 : 2908278 50 Stx2-converting_phage(16.67%) integrase,tRNA,protease,transposase attL 2845440:2845458|attR 2879101:2879119
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP017239
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2882673 : 2933237 46 Bacillus_virus(20.0%) tail,integrase,transposase,holin attL 2886204:2886220|attR 2921649:2921665
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP017240
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 570307 : 576672 7 Escherichia_phage(42.86%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage