CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019510	Janthinobacterium sp. LM6 chromosome, complete genome	4 crisprs	csa3,DEDDh,DinG,cas3,WYL,RT	0	0	1	0

1. NZ_CP019510

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019510_1

• CRISPR_ID: NZ_CP019510_1
• CRISPR_location: 1581619-1581705
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP019510_1

Consensus_repeat	Method
CCATGGCTAAGTTCGCCTTGCGGTTGGAA	CRISPRCasFinder

spacers of NZ_CP019510_1

>1.1|1581648|29|NZ_CP019510|CRISPRCasFinder
AAGCGTCAGGTGTACCCGAAGGGGACGGC

CRISPR arrays and Neighbor proteins around NZ_CP019510_1

CRISPR arrays

The CRISPR arrays of NZ_CP019510_1

>merge|NZ_CP019510|1|1581619-1581705|CRISPRCasFinder
CCATGGCTAAGTTCGCCTTGCGGTTGGAAAAGCGTCAGGTGTACCCGAAGGGGACGGCCCATGGCTAAGTTCGCCTTGCGGCTGGAA

>NZ_CP019510|1|1|1581619-1581705|CRISPRCasFinder
CCATGGCTAAGTTCGCCTTGCGGTTGGAA	AAGCGTCAGGTGTACCCGAAGGGGACGGC
CCATGGCTAAGTTCGCCTTGCGGCTGGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019510.1|WP_077400463.1|1590187_1591699_+|dipeptidase	unknown	unknown	gnl|CDD|235720
NZ_CP019510.1|WP_150130822.1|1593861_1594140_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019510.1|WP_077400430.1|1575909_1576956_-|type-VI-secretion-system-baseplate-subunit-TssG	unknown	unknown	gnl|CDD|377755
NZ_CP019510.1|WP_077400418.1|1565674_1566601_-|tRNA-glutamyl-Q(34)-synthetase-GluQRS	unknown	unknown	gnl|CDD|235573
NZ_CP019510.1|WP_077400445.1|1582747_1583677_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224005
NZ_CP019510.1|WP_150130821.1|1566792_1567422_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019510.1|WP_077400436.1|1578851_1579664_-|outer-envelope-protein	unknown	unknown	gnl|CDD|225787
NZ_CP019510.1|WP_077400469.1|1593152_1593641_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019510.1|WP_077400421.1|1567421_1572377_-|DUF4150-domain-containing-protein	unknown	unknown	gnl|CDD|225750
NZ_CP019510.1|WP_077400451.1|1584896_1585733_+|HDOD-domain-containing-protein	unknown	unknown	gnl|CDD|370050
NZ_CP019510.1|WP_077400427.1|1573674_1575831_-|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl|CDD|274542
NZ_CP019510.1|WP_077400454.1|1585871_1587494_+|M28-family-peptidase	unknown	unknown	gnl|CDD|349910
NZ_CP019510.1|WP_077400466.1|1591893_1593021_+|M24-family-metallopeptidase	unknown	unknown	gnl|CDD|238514
NZ_CP019510.1|WP_077400424.1|1572373_1573672_-|DUF2169-domain-containing-protein	unknown	unknown	gnl|CDD|370755
NZ_CP019510.1|WP_077400448.1|1583698_1584775_+|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380618
NZ_CP019510.1|WP_077400457.1|1587540_1588761_-|MFS-transporter	unknown	unknown	gnl|CDD|340882
NZ_CP019510.1|WP_171984949.1|1560070_1562746_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|236842
NZ_CP019510.1|WP_077400460.1|1588974_1589973_-|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274646
NZ_CP019510.1|WP_077400415.1|1563254_1565480_+|TonB-dependent-receptor	unknown	unknown	gnl|CDD|224544
NZ_CP019510.1|WP_077400433.1|1576919_1578773_-|type-VI-secretion-system-baseplate-subunit-TssF	unknown	unknown	gnl|CDD|274541

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019510.1|WP_077400430.1|1575909_1576956_-|type-VI-secretion-system-baseplate-subunit-TssG	gnl|CDD|377755	pfam06996, T6SS_TssG, Type VI secretion, TssG. This is a family of Gram-negative bacterial proteins that form part of the type VI pathogenicity secretion system (T6SS), including TssG. TssG is homologs to phage tail proteins and is required for proper assembly of the Hcp tube in bacteria.One other member in this family, SciB (Q93IT4) from Salmonella enterica, is thought to be involved in virulence.	9.28612e-68
NZ_CP019510.1|WP_077400418.1|1565674_1566601_-|tRNA-glutamyl-Q(34)-synthetase-GluQRS	gnl|CDD|235573	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS.	3.71047e-141
NZ_CP019510.1|WP_077400463.1|1590187_1591699_+|dipeptidase	gnl|CDD|235720	PRK06156, PRK06156, dipeptidase.	0
NZ_CP019510.1|WP_077400445.1|1582747_1583677_+|ABC-transporter-permease	gnl|CDD|224005	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only].	4.58309e-102
NZ_CP019510.1|WP_077400436.1|1578851_1579664_-|outer-envelope-protein	gnl|CDD|225787	COG3248, Tsx, Nucleoside-binding outer membrane protein [Cell envelope biogenesis, outer membrane].	0.00431941
NZ_CP019510.1|WP_077400421.1|1567421_1572377_-|DUF4150-domain-containing-protein	gnl|CDD|225750	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane].	1.01833e-43
NZ_CP019510.1|WP_077400451.1|1584896_1585733_+|HDOD-domain-containing-protein	gnl|CDD|370050	pfam08668, HDOD, HDOD domain.	7.56871e-25
NZ_CP019510.1|WP_077400427.1|1573674_1575831_-|type-VI-secretion-system-tip-protein-VgrG	gnl|CDD|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	0
NZ_CP019510.1|WP_077400454.1|1585871_1587494_+|M28-family-peptidase	gnl|CDD|349910	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions. This subfamily is composed of uncharacterized proteins containing a protease-associated (PA) domain insert which may participate in substrate binding and/or promote conformational changes, influencing the stability and accessibility of the site to substrate.	7.65706e-69
NZ_CP019510.1|WP_077400466.1|1591893_1593021_+|M24-family-metallopeptidase	gnl|CDD|238514	cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.	7.97252e-09
NZ_CP019510.1|WP_077400424.1|1572373_1573672_-|DUF2169-domain-containing-protein	gnl|CDD|370755	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169). This domain, found in various hypothetical prokaryotic proteins, has no known function.	2.69512e-69
NZ_CP019510.1|WP_077400448.1|1583698_1584775_+|BMP-family-ABC-transporter-substrate-binding-protein	gnl|CDD|380618	cd19963, PBP1_BMP-like, periplasmic binding component of a basic membrane lipoprotein (BMP) from Brucella abortus and its close homologs in other bacteria. Periplasmic binding component of a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. These outer membrane proteins include Med, a cell-surface localized protein regulating the competence transcription factor gene comK in Bacillus subtilis, and PnrA, a periplasmic purine nucleoside binding protein of an ATP-binding cassette (ABC) transport system in Treponema pallidum. All contain the type 1 periplasmic sugar-binding protein-like fold.	7.48751e-157
NZ_CP019510.1|WP_077400457.1|1587540_1588761_-|MFS-transporter	gnl|CDD|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.05565e-59
NZ_CP019510.1|WP_171984949.1|1560070_1562746_-|PAS-domain-containing-protein	gnl|CDD|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	1.08941e-58
NZ_CP019510.1|WP_077400460.1|1588974_1589973_-|LLM-class-flavin-dependent-oxidoreductase	gnl|CDD|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP019510.1|WP_077400415.1|1563254_1565480_+|TonB-dependent-receptor	gnl|CDD|224544	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism].	1.89813e-35
NZ_CP019510.1|WP_077400433.1|1576919_1578773_-|type-VI-secretion-system-baseplate-subunit-TssF	gnl|CDD|274541	TIGR03359, VI_chp_6, type VI secretion protein, VC_A0110 family. This protein family is associated with type VI secretion in a number of pathogenic bacteria. Mutation is associated with impaired virulence, such as impaired infection of plants by Rhizobium leguminosarum.	0

Protein sequences

>NZ_CP019510.1|WP_077400436.1|1578851_1579664_-|outer-envelope-protein
MGATAQAAEWSDTALSWRAGNDYREPFNPDDIKKNIFAITHASGYKYGSNFVNLDFLMSDSKDPGALGKTSGAQEAYLVYRNTIDIGKVRGSDIKFGPVRGVGVTLGFDVNTKNDVGYNSRKRMLVAGPTLMWDVPGFFNTSLLLLRESNAPSGAFPPISQVTGRYTYKTHAMLTGAWGIPLSPLFSFEGFFNLIDSKGNDEVGRDTAVETNIDMQVMFDVGAALGSAKNTFRVGLEYQYWKNKFGNSPATTGNVGQTAKTPMIRAEYHF
>NZ_CP019510.1|WP_077400433.1|1576919_1578773_-|type-VI-secretion-system-baseplate-subunit-TssF
MEQLLPYYERELGLFRQYTREFSSRYPKAAGRLLIAGETCEDPHVERLIQSVALLTARVAKRLDDAYPQFTHALLDTLYPHYLRPFPACSIVRIAADEAPGGGQLAQLAHVPRGTVLRSQPVQGVACKFTSAYDVTLAPLAISRLHFSAIIDAPPGLRLPAGASALLSIQFTGTSEQYHLDQAGFSSLRLFADGEPSVRAALLDALFLRGAGAYVALDECGPWQAVDGTLLTPAGYADDDALIPFSARSHPALRLLTEYFAFPEKFHFIDIDWSRLAALLPKQCRQFTLHLPLKGVRSDSHEARLLSGASRDNLLLGCTPVVNLFAKSGVPIRLTHTEPDYALVADATHAFAYDIHSIESVTVVRKDEASERLSAFLPLYASLQGSQAEHGPEQGQYWLARRDEAVAAISPGHEMRLSLIDPQFSPGSATCATVSTQLLCSNRDLPTHLHYGLPGGDLLAEDVPDGIPARFLRKPTPSMRFLADTHWRLIAHLSLNYSSLTQAGLGEFQKMLSLYDLPRSPTTQRLIQGIVTLEHGSTRAWMPTVPFPTLMPGIAIRLGIDEQAFSGCSLFIFAQVLQRYFALNSQLNCFSQLTLLSHRSGEEILRCPERSADATPA
>NZ_CP019510.1|WP_077400430.1|1575909_1576956_-|type-VI-secretion-system-baseplate-subunit-TssG
MPGTQRRRHASVIQQLLDAPQRFECFQALRLLLAWLAAHGVDEHTALAKFVRFDNSVSLRFPASQVEALATGGIADADALLQALLSGQLPHIHLTPTFMGLLGCQGSLPSHYSEHIAAHQYSERDTSARAFLDLFSSRAVALFYQAWQKYRIEQAGHSGKFLSRLLDLAACQSLQGQDEAVAGLYSGLLQQRNVSSIVMARILADRFGVPCHIDEATGAMDMLAPREQTALGMENVVLGQRALVGARCRRPDLAVRLRLGPLTAQQHASFLPRAPASQALRHMLMLFGQPLVRYDIVLVLRASEVRGMALTAAPQGGLGCNSFLGDTAAPCHRDDMHYEMQLMPSFND
>NZ_CP019510.1|WP_077400427.1|1573674_1575831_-|type-VI-secretion-system-tip-protein-VgrG
MSQFPDTTAACTALVDDMQGQRLLRLHFPHGDGPAGIQFLANSLAASESLSRDFSYVVEVLSDNASVALDKVMGKMVTVELVREDGTLRYFNGYVFEFRFLRADGGFAFYEMVLEPWLAHLHLRQNNVAFHGVTVAALTDKVFDDYLMRDYKLAAGGPDPAITYTCQHNESDHNLLHRHWEQLGWHYRYEHRPDGHTLWLSDDSTTGKPIDGDLSEIPFQHQAGSLEDDGVHQWSTVRRMAPSQMTVASFNFKNPRSARASRDSLNRQGAVPSLEVYENTGSYGFKDLDDGELLARRRMEEVDAQGQLFEAQGNDRTAQPGRWFTLGGHFDSANSGKGAGEYLILSVHHYASNNYQQGHGATSHYSNTFTCIARAIPWRPGRNFHSREPKIYGVQTATVVGPPGEEIHTDGYGRVKVQFHWDRLGTFDDKSSPWIRVISNWAGPNFGHISLPRVGMEVAVQFLDGNVAMPIVIGCVYNARNMPPWDLPANKTQSGMLSRSSKKGSATHANALRFEDRKDAEELWLHAEKDQRIEVEHDESHWVGNDRRKTVDRDETVHVKRDRTETVDHDEDITVHNNRRERVDHDEHIDIGDNRREHVGGNEQVQIDGHRSERVTLAKDETIGLAKVLTIGAAYQTTVIGAMNTTVVLAQAEQIGLAKSVIVGADSTLTANDSHTMTVGTSSITITPGRIEIVADEIIIRGRSKVQIHGDDIDNNPG
>NZ_CP019510.1|WP_077400424.1|1572373_1573672_-|DUF2169-domain-containing-protein
MNDAGTAHFNIPNLLFDNRTPHAASQFDMVDQFGAAFHVVVARMGYTLGPCGADGVASLLPMARQSSLATEDRHLHDDTQAGTVQESDFAPYKPRCDVIVNGVAHAPRGQAMPQFLVNLKVQSEKKTLIDKTLQVCGERAFRKKAILTRLAQGCARIATAGLLRPNPWHLSTPEPFLQLPLHYAYAYGGQCRIEADDCNAAKHDSCQANPLGRGFARHWYLDAKQIDEVPAPRITQPSLPCTAAQFWQGAGGKELPPPTGLAVIGRGWLPRRALAGHIAVKDKWDADEVPTLPEDFDFAYWNSTPPDQQCPYLAGLEQFTLTNLCRHDHPSARIDPRGNTVLRFALPQQVLCLLLADKNDQLLVWRLAIDTVLVDPEAATVELVWRAIVPADAGQVESRLLHVMEPAQIARIALLEQAQEALGKAAEQGKKP
>NZ_CP019510.1|WP_077400421.1|1567421_1572377_-|DUF4150-domain-containing-protein
MTNETVTKASRFYCVSLSPDICKTPVGSSTPPIPYNIIGEFAEAQNASPNVKSHSEPVILHQRSIIPTVKGDAAGKAGGVKSGTVGKQVDTKVASPIHRANGASLVQMGREVWMNSRNTVGKIYERGAEAAKPVLKELKAAIREAAKEYKEHGSKKMHGAAEDMVDAGGTVLTGSAVLGVAGVGVAATGVGAPVAAAMEAGAAAGAVAGTATVASGTAVEASATVLDQTADYILTGKTPNLLNTAADIGMNIAGNVLQAAVFSKVPGGKILSKFLGKKTAPTINKVKDKLVGKKPDKPPPKLDKPPPKNGGDDGKSRGKKEPKSEPPSDCCPKDSGPAKKPAKGRKPVHFGTGQEILYQTDFALERSIPIAWTRCYRSGAECEDWGLLGARWSTPYTTSLSLCEAGIVYHDDSGRALRLPRLEAGQQHDSRKEGFTLTRDGADTFTMLWRDGSVDRYARAESGWLPHGYDGVNAMLAPSAPIAAQRFALLRSEGRDGRGISIDRLIDAKPGEVLLRLRSDDGGVLEAMRGEAEQAIHIGSIDEILPDGSRLCHVRYAYAIETNDALPPFPPRHNLVSQSNALGDTRRYAYRHHLLTSCSSYTGFAYELDWISLDALRARWRGSPLSEQELAQRHPVTVANSYQARAIATRARDGSEHTRIDYVDNDTSRVTENGGVLEYTFDANWLVTEVRRVIDGKAASLGRREWDRDGMLLADIDANGAATRYAYDAAGNLTRSIDAKGNSSSIGYDGKNQPVAFTDALGHTTLREYDAAGRPVSITDALGHVTRYRYDQRGQLVELIDARGGSKHFQYSRQGWLTAYTDCSGHTSEYAYDTLGRLEAARDALGHATRYEYDALGRLIRLTAPDQTGEHYAYDADGNLVLHVDAGGLQTRYRYNGQGLPVERTDAIGQTVQYRYDAALQLTELINAKGESYRLAYHAEGWLASETGFDGKHTQYSYDQAGNLTATECGSQRTQLLRDALGLLSVKTTADGVVRYAYDALGRLTAVSAPQAEQRFVHDALGQLTEERSAYFLQSLPDAGRLPNAPRAPDASFVMTHAYDKLGNRIQTVLPNGRRIDTLRYGSGHWHGVLWQGQTVVDVERDKLHREKQRTLGNSGLLATRQYDPQSRLTQLTLARGADAPAPVRERRFEYDAQGNLTTIFQAGATTAGPLGRLSYTYDPVGQLLAAVQPGLAERFAFDPAGNLVDKAPAPGNVLKNYGDTEYAYDEQGNATGKRFHPPGRESTWSDLELHYDAENRLSHASRTERQSRHRARYFYDAFSRRIAKRVEEARWSKQQDINKDQPARTSATTTVFVWDGDTLAQELGQEETVIYLYEPDSFVPLARIASPACRQASAVHLPRVTQWDLPATRQDAELQAAIAQEQADTEALHVSAWQYALAAADGAAAHDRITHYHCDHLGTPRELTDAQGNVVWSGRYKAWGRLLHVEGEIKQPLRFQGQYEDGETGLFYNRNRYYEPNCGRYVSQDPIGLSGGLNGYAYAQNPIYWNDPLGLAKCKVIISAADEIRNLPALHNMLPSKIRNILRNRGYTMVGSRNNATGSNTAGQVWTKNLPDGYTASVRIDPAESRSPPLGRADEVPHAHKEIVPTSSVSNGNYGPPRLSGSLLCDDTGNIAMQGDFKGMHIEIKKGKLK
>NZ_CP019510.1|WP_150130821.1|1566792_1567422_-|hypothetical-protein
MKNTSIKNTVLNSENMDNLDIKNILKILKQKETENKLTKEQIEIIKKIGNSEKDKEIVWSLLFKIDPIEKILNITKQETQKIYTFEGHQIISNELRHAIAYVLLKSNNEDFKKIIHKLTSSKSNALKLIASEYYLYKKNNHKAIEILLKILEDEEIDHNISDAIDMHISSCTNSEMLSFIEKKIKSDIGNKKTKEILNYVLSIMKISMK
>NZ_CP019510.1|WP_077400418.1|1565674_1566601_-|tRNA-glutamyl-Q(34)-synthetase-GluQRS
MISLHGNPPYIGRFAPSPSGPLHMGSLVAAMASYLDAKVHRGTWLLRIEDLDYDRNVEGADLGILASLQRCGMHWDGEATWQSRRLPLYEAALKQLQDDGLVYACGCSRKEIQDSVLQAGAPKGGVAVYPGTCRHGLMPGKAARAWRLRVPQGADAVYSFTDRWAGPQRQDLASEVGDFIVLRGDGFWAYQLAVVVDDGAQGVTQVVRGADLLDSTPRQLYLQDVLGLPHPGFLHVPVVTNDSGEKLSKQTGALAFDTGTGAAELLASALLPAARFLGLDVRADDVEDFWRQAVPAWAQRLARLHDHA
>NZ_CP019510.1|WP_077400415.1|1563254_1565480_+|TonB-dependent-receptor
MIKMSKMHKRLCAKSAAMLALSAALPIGSAYADEVAADTTPAASQLETVTVTAQRRKENIRDVPVSVSLLRDEKLDVLVSGGQDIRVLAGKVPSLNVESSNGRTFPRFYIRGYGNTDFNIFASQPVSLIYDDVVQENPILKGYPIFDVAGVEVLRGPQGTLFGRNTPAGVVKFESVKPKLDKVEGYYNVSAATHNTTNFDGAVNVPLSKEWAMRVSTLRQHRDDYVDNTFTGQKNALDGYNEHAERVQLMYAPNGTFNALFNVHQRSTTGSARVFFANAIKLGTNDLADGFDPTKSYTDALNFQELRTNGASARLSWELDGVKLYSITGFERVGKYVSHGDIDGGAPGMVPAIPFPVETAGGISSVKQYSQEFRAESKNAGPLNWQAGVYYFNEDANGYTDNFGGSDHALVSHLASRQKNTAWATFGSVNYAVNDDFMLRAGLRYTKDKKDFNTVEADRVKQISPTSADVSKAKVNWDLSGTYKYNKDVNFYGRIATGFRAPSIAPASKDVSVTVADAETITSFEAGIKADLFERRARVAFSLYNYQVKNQQLTVVGGTSNVTRLINAAKTNGRGAELELEGFVTPSLKMSLGGSYNFTEIKDPSLSVATCRSCTVTDPKNTAGFAIINGNPLPQAPKWTITATGRYSIPMENGEFFVFTDWAYRSKINFFLYESTEFTGKPMVEGGLRVGYTWDAGKYEVAAFGRNITDTQRITGAIDFNNRTGFINEPRQFGVQFKGNF
>NZ_CP019510.1|WP_171984949.1|1560070_1562746_-|PAS-domain-containing-protein
MPEPSQPSNAVPSSTVAAQAAHLLLSAHCDIVWSTKTFGQFDADQPSWRAFTGQTEAELLGRGWVNALHPDDRNLPYVMPSHLTSVFEAEYRLRHVSGAYRNMLVRMLPVLAPDGSIVEWLGSHCDVTQQRQTEQRLRLAMQGGRMGTWEIDLGSGSMAASDAFKANLGLPPASRIDYAQLTGAMLDGDLQHWQTVVHAAIASASDFEIDIRVRWPDGSLHWAHMRGTCASDGAGNVIGLSGISLDLTTSKQNEETLRLTLAAGEVATWNWDIVADRVTADSNLARLFPVNADAATAAPLARYLDIIHPADREQVSARIAQALHAHAPFEASYRVAAGDGQYRSVIARGRAEYAPDGTPLQFPGVLLDITRQKQVEDALRRSEERYRTLIELMDQAFCVIEMLYDEQGRPVDFRYLEGNAAFVKQSGLDNAIGKTIRSFVPDHDQHWFDLYDQVVKTGEPVRYENEAVAMERWFEVFAARLGGPGSRLLTVLFSDISERKRSEQQLRQLADNLSEMDRRKTEFLATLAHELRNPLAPIRNGLQIMRLAADKPATVARVRDVMERQVNQMVHLVNDLLDVARITRGQIELKLERADLKTIIASAVETSMPLIEASRHQLQVQLDELALPLEADPTRLAQVLGNLLNNAAKYTPAGGHISLRARRDGNEALIEVKDSGVGIPTESIATVFDMFTQVGQNMGRAQGGLGIGLSLVRRLAELHGGSATAASHGAGLGSTFTVRLPLLKEEAQAPAAPDALAPAASGRHFRILVVDDNVDAADTLAAVLDMMGHATQVAHDGAQALAVAPQFLPDVIFLDIGLPGMNGYEVARALRRIPAGASVVLVALTGWGAENDRSQSSAAGFDHHLTKPANLLAIGELLAALSTPTTLTDHD
>NZ_CP019510.1|WP_077400445.1|1582747_1583677_+|ABC-transporter-permease
MDNLAFTIAPLIAASINAGTPLMLAALGLLVNEKAGVVNLGAEGMMLVSAITGFAVAVNTGSPTLGFLAGAGASMVLSGFFAWLTVWLGTNQYATGLALSLFGAGASTYIGLKYVGNSLQNGRFGIPYLEDLPVLGPALFRQHPMVYLSLLLCVAIAWFLYRTRAGLVLRAVGESPASAHALGYPVRRIRLAAVLFGGACCGLAGAFLSLVYTPLWVEGMVAGRGWIALALTTFATWRPARVVGGAYLFGGITILTFHAQALGVPIASQLLSMLPYLAAIVVLVLISSNANYIKLNMPASLGKNFNPGN
>NZ_CP019510.1|WP_077400448.1|1583698_1584775_+|BMP-family-ABC-transporter-substrate-binding-protein
MSKKLVCAAVCSAVLMPVMAAAPATVPLNVGFVYISPIGDAGWTTQHDQARKEMEKALGSKITTKFVENVPESADAERVIRDLAQTGSKLVITTSFGYMNPTLKVAKQFPNVKFIHLTGYKTGPNVANTNARFYEGRYLAGVLAGKMSKTHVAGYVAAFPIPEVLQGVNAFTRGMRSVDPKAEVKVVWVNSWFDPGKERDAAITLIGQGADVVTHHTDSTAVVQAAEEKGKYAIAYHSDMKKYGPKAQLAAVTHHWGDYYTKQAQAVLDGTWKSSSTWGGIKDGMVKLEGINAAVPADVKQFVLAREKDLVAGKLNPFSAPIKDNDGKVRLDKGVLDDAALTKMDYFVEGVAGKVSGK
>NZ_CP019510.1|WP_077400451.1|1584896_1585733_+|HDOD-domain-containing-protein
MDRLEVFKIIALQASKGELTFPANVKATLKLQEALDDPDCHIEAAARMVMAEPLLSARVVALANSAAYNRSGNEIANVRAAVSRLGFATLKSMVASVIVRQLGSQITDPQLRAKAAKLWEHTAHVAALSQVIARKVTHVDVETAMFAAIVHEVGGFYLLSRAEEYPGLLDDNTEDWIEYGEKLIGRGVLRQLQVPDMVLQAVEGMWHGGSPFPPRTLGATLVLANDLSPVGSPLHPPESAARRQAAAKIDFGIGGSTLHTILDESAEEIESLAAALLV
>NZ_CP019510.1|WP_077400454.1|1585871_1587494_+|M28-family-peptidase
MQKLFSSLALTALAFSAQAATALPVVQEAPLRAHLAFLSNDLLEGRGTGQRGADLTVAYLETQAQMAGLKPVRGNSYRQSVQIAGVKSLPQDSSLQAVAGGKAVPLAFGPDWVWATGDSVAAHTFDAPLVFVGYGITAPEEGWNDFKGVDVKNKIVVMMVNDPQPTALDPNRFAGKALTYYGRWTYKFEEAKRQGAAGVLLIHTKPSASYDWSVVQNSWSGSERFQLADRTAGTPLQGWIEEDAARRLFAAGGQDLDALRAQAENKDFKAVALNAKLSGEMKSIVRKVEQFNIAGMVPGTDPKLKDEAVIYSGHWDHLGKQGEGDEKAGDTIYNGAVDNASGTAGLLAMAQEAVKKPAKRTQIFLWVAAEEQGLLGSAAYAADPLWPLDKTAAALNLDSLNFVGATHDIGAQGSERTELGAMAAATAKAMGMHIAPARPDLAGGYFRSDHFSFAKAGVPAFSINGGREYIKDVEASKAKAAAYGPRYHQVTDEYNASWDLSGMTQQAQFTLNLGQAVANGAKMPAWKAGDAFGKAREQAK
>NZ_CP019510.1|WP_077400457.1|1587540_1588761_-|MFS-transporter
MKSASSSVDASTLLSSTRILLFALSAGVLVASLYYVQPLTSMLAASFGVSVPQAGYLVTATQIGYVLGIVFLVPLSDVLNRRQLLTWMLIAKIGALLLAATSQNIIVFAIASVLMGITASALMVVTAMVASYAPDHSRGRMVGTVMTGLLLGILLARTVSGTVSQISGGWRTVYVLAAIVVAALLLMLRRILPNEAPRGKLQYGKLMASLADIIRQEPLLRQRALFSGLGLGTFSVFWTGLTFLLSGAPYHYSEMQIGLFGLAGATGAFAANTAGRMADRGYARQATWLLAVASIAGWALIGFGAHSLVLLLIGIVLLDMGVMGLQVTHQSIIYKLAPHARARVTTVFIAGGFIGASAGSALASASFAAGGWPALCMVGGAMPLLMLLVWSKYRHTQRRLERASAT
>NZ_CP019510.1|WP_077400460.1|1588974_1589973_-|LLM-class-flavin-dependent-oxidoreductase
MIPFSILDLAPIAEGSDASQSFKNTLDLAQHGERWGYNRYWLAEHHGMPGIASAATAVVIAHVAAGTTSIRVGAGGVMLPNHSPLVIAEQFGTLEALHPGRIDLGLGRAPGSDQTTARALRRDLQSDAEQFPQDVLELIDYMSDEPRQRVLAVPGKGAKVPVWILGSSLFGAQLAAHLGLPYAFASHFAPQMMLQAVAYYREHFKPSKQLAKPYVMLGFNVFAADTDAEAHLRATSMQQAFVNLRTGRPSRLQPPVPGYLEQLGPQERAMLDSVLSCTAIGAPDTVKAKMAAFIAETGADELMITSQIFDHQHRLRSYEITAQVHAELARQQ
>NZ_CP019510.1|WP_077400463.1|1590187_1591699_+|dipeptidase
MFKKPVLLSLIGLLLQPAFSVHAAPVSQQAQDTARYALATYPEPLIASLAKMVSFNTVADPAVPFADNPQHTGFKRYLASEAQRLGFDFHDHGQVVIIGMGKGSERVGVITHGDVQPVNPAKWARSPFELDRTSEPGKLLGRGTEDDKGPIATALYAMKAIQDKQVPLSKRIELYVYMAEESDWEPLKQFLKTHTPPQVNITIDAEYPVVTAEKGYGSIKLTLPPRTALPAKGGAVLTHLAGGFFGSQIPEDATAVIERAPAALEAAIRARAQGQHGVRYSYARAGATLTVTALGVSAHSSKPEDGVNAISMLADALAVQPWQGTQAADMLSFLNELVGTGIYGERFGQIAYRDGFMGPMTVAPTVLKQDGGALELNINLRRPQGKTAAVLQQQVTAAFDGWKARRQVPAALRVQIGEAWLQTDAPQIPTLLSVFEHYTGIAHPQPVAIGGGTNSRLFPNAVSFGPAMPHTVYTGHSEHEFITEKQLLLNLQMYTAVLIELAK
>NZ_CP019510.1|WP_077400466.1|1591893_1593021_+|M24-family-metallopeptidase
MNWPLELEVAHKLAQMRGWLEDQRAGAVRLRGVDWFAWATAGASNSHYHTAECGCAEVLVTRDAAYILTDEAEAMRMREEEVRGPWTWQVSPWMQPQLYELREHFVQHAAGGAPVLSDRPGLHERSLPVALREERLVLLESEQLRYRQVGQLAARAAADALRQARPDWSELELAAACVRALWLRGLQAVHVLVSGAERQQRYRRAPPAQVELGPQAVLALCARRFGLCASLSRQRRFGPAQHRADGAAVVMDDADAAMLALEAVALDACETGHALSMVYHALDSAYAYAGQPDTVRTSRQGGIHGYLAPEVAAGAHTEIILKRGMALAFHPSLPGSTVEDTFLLDGSQLHNLTHDPAWPSALVQGRSRPLTLALA
>NZ_CP019510.1|WP_077400469.1|1593152_1593641_-|hypothetical-protein
MRSKTTLLLTGLTCALLAACHSTDKTSLARSNSGETYAAPAGTTPQSSTASSTSSTAADTSNAQSGMSSDMRNDANQSTMNISSATVQSIETVPRSMDQGSGDMQAGTSGTAGSTSGAAGNMLYRVTLRLDDGTTRTFVQNTQPAFQIGDRVSVQKGVMQRY
>NZ_CP019510.1|WP_150130822.1|1593861_1594140_+|hypothetical-protein
MSSGPTAKLIDELVLAIGGTAHDARARHVLAQALHGLVRLARSEQLLEMQRDTARAMGAGSRRETRALMRRLGKRGQGQLRLALQDSEADRA

Crispr_ID: NZ_CP019510_2

• CRISPR_ID: NZ_CP019510_2
• CRISPR_location: 2104897-2104996
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP019510_2

Consensus_repeat	Method
GCTTTTAATATGGGCTTCCGTCACGG	CRISPRCasFinder

spacers of NZ_CP019510_2

>2.1|2104923|48|NZ_CP019510|CRISPRCasFinder
TTTCTGAACGGTCACGCCCGCCAGGCGGCCGGTGCAGGATGACGGCGC

CRISPR arrays and Neighbor proteins around NZ_CP019510_2

CRISPR arrays

The CRISPR arrays of NZ_CP019510_2

>merge|NZ_CP019510|2|2104897-2104996|CRISPRCasFinder
GCTTTTAATATGGGCTTCCGTCACGGTTTCTGAACGGTCACGCCCGCCAGGCGGCCGGTGCAGGATGACGGCGCGCTTTTAATATGGGCTTGCGTCACGG

>NZ_CP019510|2|2|2104897-2104996|CRISPRCasFinder
GCTTTTAATATGGGCTTCCGTCACGG	TTTCTGAACGGTCACGCCCGCCAGGCGGCCGGTGCAGGATGACGGCGC
GCTTTTAATATGGGCTTGCGTCACGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019510.1|WP_077401501.1|2092010_2092388_-|cytochrome-c	unknown	unknown	gnl|CDD|365823
NZ_CP019510.1|WP_077401504.1|2092648_2094199_+|DUF1800-domain-containing-protein	unknown	unknown	gnl|CDD|378055
NZ_CP019510.1|WP_077401538.1|2112337_2112991_-|glycine-zipper-2TM-domain-containing-protein	unknown	unknown	gnl|CDD|225675
NZ_CP019510.1|WP_077401535.1|2111930_2112173_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019510.1|WP_077401515.1|2098948_2099797_+|metallophosphoesterase	unknown	unknown	gnl|CDD|224327
NZ_CP019510.1|WP_171985143.1|2113231_2113954_+|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NZ_CP019510.1|WP_077401546.1|2114446_2116483_-|AsmA-family-protein	unknown	unknown	gnl|CDD|225529
NZ_CP019510.1|WP_010396376.1|2111602_2111749_-|lmo0937-family-membrane-protein	unknown	unknown	unknown
NZ_CP019510.1|WP_077401532.1|2107829_2110673_+|insulinase-family-protein	unknown	unknown	gnl|CDD|223685
NZ_CP019510.1|WP_077401509.1|2095620_2096793_+|AI-2E-family-transporter	unknown	unknown	gnl|CDD|223701
NZ_CP019510.1|WP_070304156.1|2110742_2111378_-|OmpA-family-protein	unknown	unknown	gnl|CDD|225439
NZ_CP019510.1|WP_077409032.1|2101389_2103501_-|site-specific-recombinase	unknown	unknown	gnl|CDD|378408
NZ_CP019510.1|WP_010396348.1|2096899_2097124_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019510.1|WP_077401526.1|2105636_2107184_-|TerC-family-protein	unknown	unknown	gnl|CDD|223930
NZ_CP019510.1|WP_077401518.1|2100001_2101393_-|cardiolipin-synthase	unknown	unknown	gnl|CDD|234967
NZ_CP019510.1|WP_077409031.1|2097289_2098024_+|phosphatase-PAP2-family-protein	unknown	unknown	gnl|CDD|239486
NZ_CP019510.1|WP_077401529.1|2107254_2107545_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019510.1|WP_077401543.1|2114050_2114269_-|osmotically-inducible-lipoprotein-OsmB	unknown	unknown	gnl|CDD|182532
NZ_CP019510.1|WP_077401507.1|2094340_2095531_+|DUF1501-domain-containing-protein	unknown	unknown	gnl|CDD|226587
NZ_CP019510.1|WP_077401512.1|2098029_2098944_+|sphingosine-kinase	unknown	unknown	gnl|CDD|224513

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019510.1|WP_077401501.1|2092010_2092388_-|cytochrome-c	gnl|CDD|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	1.95248e-06
NZ_CP019510.1|WP_077401504.1|2092648_2094199_+|DUF1800-domain-containing-protein	gnl|CDD|378055	pfam08811, DUF1800, Protein of unknown function (DUF1800). This is a family of large bacterial proteins of unknown function.	3.07879e-164
NZ_CP019510.1|WP_077401538.1|2112337_2112991_-|glycine-zipper-2TM-domain-containing-protein	gnl|CDD|225675	COG3133, SlyB, Outer membrane lipoprotein [Cell envelope biogenesis, outer membrane].	1.28556e-17
NZ_CP019510.1|WP_077401515.1|2098948_2099797_+|metallophosphoesterase	gnl|CDD|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	9.16364e-31
NZ_CP019510.1|WP_171985143.1|2113231_2113954_+|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.92448e-19
NZ_CP019510.1|WP_077401546.1|2114446_2116483_-|AsmA-family-protein	gnl|CDD|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	5.83837e-104
NZ_CP019510.1|WP_077401532.1|2107829_2110673_+|insulinase-family-protein	gnl|CDD|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	5.07609e-60
NZ_CP019510.1|WP_077401509.1|2095620_2096793_+|AI-2E-family-transporter	gnl|CDD|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	8.19153e-43
NZ_CP019510.1|WP_070304156.1|2110742_2111378_-|OmpA-family-protein	gnl|CDD|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	7.68034e-41
NZ_CP019510.1|WP_077409032.1|2101389_2103501_-|site-specific-recombinase	gnl|CDD|378408	pfam10136, SpecificRecomb, Site-specific recombinase. Members of this family of bacterial proteins are found in various putative site-specific recombinase transmembrane proteins.	0
NZ_CP019510.1|WP_077401526.1|2105636_2107184_-|TerC-family-protein	gnl|CDD|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	8.13993e-95
NZ_CP019510.1|WP_077401518.1|2100001_2101393_-|cardiolipin-synthase	gnl|CDD|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	5.92343e-108
NZ_CP019510.1|WP_077409031.1|2097289_2098024_+|phosphatase-PAP2-family-protein	gnl|CDD|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.02928e-33
NZ_CP019510.1|WP_077401543.1|2114050_2114269_-|osmotically-inducible-lipoprotein-OsmB	gnl|CDD|182532	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB.	5.51241e-12
NZ_CP019510.1|WP_077401507.1|2094340_2095531_+|DUF1501-domain-containing-protein	gnl|CDD|226587	COG4102, COG4102, Uncharacterized protein conserved in bacteria [Function unknown].	5.7377e-57
NZ_CP019510.1|WP_077401512.1|2098029_2098944_+|sphingosine-kinase	gnl|CDD|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	7.12262e-49

Protein sequences

>NZ_CP019510.1|WP_077409032.1|2101389_2103501_-|site-specific-recombinase
MLAILERIDPNSSNIDLLVELFNSLRPKRPHDSATAIANVRTLRQLLKGNPAQARALHEYVLRVLAARRHASLYTDIGVLSNSGFFTELKRRIAYRMLPPALGDEYLNDALDQVLYLKTDYLWISNVPATDWLELFDVLTSDEVELAVGDGNIMLPGMLDAIRTLSYRVCAMGLEPELTRFHSEIEVFQSPFMVQNTEVNAYLDAYTSLLQGDIEHIEDARHLLVMLDQCDAVIAKIRKKALYQGTSIPLTYLLVALAQSIDRLRKLLFLVDTSGELPASNNVDIDAITVDATQDLLHPQPVSRRRAGAVGLALELIRAHNHKYKVSDLFSDNINLLARNVTENASRTGEHYIAENRREMGAMFLSSAGAGVIIGFMALFKILMSYLRSAPLVEAFMFSMNYSIGFMFIHLLHFTVATKQPAMTASRIAAGLHSKDGRNIDLDSMAELINKVFRTQNMAVLGNLATAIPTAWLIALGYKAITGHNLVTPEKAMHLLHDIDPIGSPAIFYAMIAGVCLFVAGLISGYYDNQALYTRWAQRIAQLRGLGRVIGQDRLQRLGLYLENNLGGLMGNFYFGILLGSIGTLGFLIGLPIDIRHITFSAANFATALVGLDHNMSWQLAVKSLSGIFAIGTANLLVSFGLALWVALRSRQVRFKHGMQLLKILGKRFLRSPIVFFFGSKNPPPLALADDSANLSPTTKAQK
>NZ_CP019510.1|WP_077401518.1|2100001_2101393_-|cardiolipin-synthase
MTARRMQPCLTALLLCWTLAACASLPNVKNLNTTLEPVAKPKVITGKGAVLNVNSRAALLNKRWARSDMDLKAQAALEEAATGVPLIKGNKVTLLFDGPQTMAAMFQAISEAKNSINLETYIFDQDPLGLKFADMLIEKQQAGVTVNVIYDSVGTLGVPQAFFERMRAAGVHLVAFNPVNPAKLKGDDWKINNRDHRKVLIVDGKTAFTGGVNISDTYAKSSLFRSKNKSADKSDVGWRDTHVKVEGPAVAAFQWLFIRTWAQQDQADLPDANYFPTLSEVGDKLVRVVASEPDGGFEIYKAYILAIQEAKKSIHITSAYFVPDQQTVDALVAAAKRGVDVTVVLPGVSDSGLVFHAGHALYDQLLAGGIRIFHLKLAVLHAKTAVIDGAWSTVGSTNIDMRSFLHNSELNVIVLGDSFGREMENAFQEDLRDSEEITRAKWETRPIADRMKEWAARFMNYWL
>NZ_CP019510.1|WP_077401515.1|2098948_2099797_+|metallophosphoesterase
MRTIVHLSDLHFGKVDADLLAPLRALVERLEPDVVVVSGDLTQRARSAQFQQARHFLDSLPGPQIVVPGNHDVPLYNVFSRFLTPLVKYRRHVTDDLSPEYVDEEIAVLGINTARSLTFKDGRISHEQIDFLRERLGRLPPGLTRIIVTHHPFDLPEHFDDDDLVDRAPLALQMFSECGVDLLLAGHLHASVAGNTAERYKIAGYAALMVQAGTATSTRGRGESNSFNVLRVENSCIRVERYSWNEDSADFEKVSTEAFERQGGVWASLRPLQVGLARRSQA
>NZ_CP019510.1|WP_077401512.1|2098029_2098944_+|sphingosine-kinase
MILSKIAVIINAGAGCGYAPDWAQQLEAKFAAVGLDAAITLAASGADMIATAGQALRDGAPIVVAGGGDGTINAVASVVVGSGTPFGVLPLGTLNHFAKDLNIPLELDAAIANVAQGVPHQVDVGEVNGRIFLNNSSLGLYPDIVRDREKQQRRLGRGKWLAFSWALVAALRRYPFLSVQLKLKDAVHARRTPFVFIGNNEYLMEGLNIGERERLDGGQLSLYVAQRPGRLGLLKLALHALFGKLSQAKDFDVLTATDLEIATRHRRLRVATDGEVTVMNTPLQYRIRPAALTVLVPAPAPSGE
>NZ_CP019510.1|WP_077409031.1|2097289_2098024_+|phosphatase-PAP2-family-protein
MGMTTGWTTKLRRFVEARLSPEGELGLHMTVGVALMLVAIVVFHEIAEAVMGMAQITVIDLQVAQWFNQHAVPWITRCLLVVTHMHGVIGAITLAVLLGWYLHRKGADYWLFTLVITMPGVMFLNLLLKYIFVRARPSFDEPILQTALSTYSFPSGHTATSTALYGLLAAYLICQTAPGAWGKRIAIALGAFLMASLVGFSRIYLGAHYLSDVLAAMAESYGWLAICIAGVSTLRRRRHIRQTK
>NZ_CP019510.1|WP_010396348.1|2096899_2097124_-|hypothetical-protein
MATLNSGFGSRFGLEYAPSSFLVRMGKREILVCRDFRKRYYTVNPLIECGTGIEPGYVEVLLMRRWLLILSKAH
>NZ_CP019510.1|WP_077401509.1|2095620_2096793_+|AI-2E-family-transporter
MNDTQRDIVSAGFSLALVAVTAFVMQRFFLPLVWAGILCVATWPLYVRVRAALGRRTIVAAAVLTLAFACIFIIPVLFGVAQAAREVPVLANFVVHANADGLPVPDWVAHIPLAGSAIGDWWQATLSQPHGLGHFFAGSAVGGFHSARDMLKVLGADVFHRLVDFGLAFLCLFFFYKDGEALTRQITAVGSHFLRPERWGRYAQKIPTAIRATVNGLVLVGLAEGVLIGIAYAIAGLPSPALWAFATGILAIIPFGAPLAYGCAAALLVFQGNVGAAIGVAAWGTVVLFVADHFVRPGMIGNATRLPFLAVLFGILGGVETLGLVGLFIGPVVMVLFVTLWYEANVTDRVPPANMPSSTAADAGTDALAGTVAGTAAETPASPAAPERTQ
>NZ_CP019510.1|WP_077401507.1|2094340_2095531_+|DUF1501-domain-containing-protein
MNRRDLLKALAAAPLLTHAGSLLAAPATDAKLLFVFLRGGYDANNLLVPVGSDFYYAARPNIAIAKPGEENGALALNADWALHPALRESIYPMFTGGEAAFIPFAGTTDLTRSHFETQDTIELGQEINTRRDFRSGFLNRLVQTLNNSKAGPAISFTDQLPLIFQGGVQVPNMALRSVGKSGIDARQSQIIAAMYRGTPLQQPVSAGFVVRDDVTKELTGEMQAANRNAISTKGFELEAQRIARLMKDKYNLGFVDVGGWDTHVGQGGASGYLAGRFDELGRGLAAFSQEMGSAWRNTVVVVVSEFGRTFRENGNRGTDHGHGSVFWVLGGGIKGRQVAGEQVAIAQANLFQNRDMPVLNEYRAVLGGLLRRTFGLTPAQLDHVFAGVKPAELGLV
>NZ_CP019510.1|WP_077401504.1|2092648_2094199_+|DUF1800-domain-containing-protein
MTPHRLLPTTLIALLLLAGCAATGPGPAAQADHRAQSSPAQDIAMLERVSWGVNGGSVRQVQDKGWNAWLRAQLHPGKAALPPAIAAQIDAMTISQVPLEQLVISMEQKRKESAGVMDDVAKQQAQKEYQQELNRLAREAATRSLLLDVYSTNQLQQQLSWFWLNHFSVHQGKHNLRAMVGDYEANAIAPHALGKFRDLLGATVHHPAMLRYLDNEANAAKRINENYARELMELHTLGVNGGYSQADVQELARILTGVGVNLGADTPKVKPALQSQYVRRGLFEFNPNRHDYGDKQFLGQTVKGRGLAELDEALDRLSRSPATAHFISGKLAQYFVGDNPPEALVARMAATFQRSDGLIADVLQTMFDSPEFRQSLGKKFKDPMHYVVSAVRLSYDDKPILNAGPMLSWLARMGQPLYGRQTPDGYPMTDASWASPGQMTTRFDIARTIGSGSAGLFRTEGPQPQEKVAFPQLASALYYQSLQPGLSPATRQALDQAASPQEWNTFLLSSPEMMHR
>NZ_CP019510.1|WP_077401501.1|2092010_2092388_-|cytochrome-c
MKILFIAALGTLSLIQAPSALAENLNGKTLYVQRCAVCHGAEIKGTGPLANKSNPPTPDLTTAAFKKRLKDYPGVIVSSVILRPNGDLIPKTLKENGVKIAPYAWRVKDFRDLNQYMSDVILKNR
>NZ_CP019510.1|WP_077401526.1|2105636_2107184_-|TerC-family-protein
MEWLFDPTIWVGLLTLVVLEIVLGIDNLIFIAILAEKLPPHQRDKARVLGLTLALVMRLGLLSLISWLVTLTTPLFSILTFSFSGRDLILLVGGLFLLFKATSELHERLEGVTHAQTGPKVYAGFGLVVAQIVVLDAVFSLDAVITAVGMVENLYVMMAAVVISIVVMMLASKVLTRFVNAHPTVVVLCLSFLLMIGLSLVAEGLGFHIPKGYLYAAIGFSIVIEFFNQLARRNFLKLQSNAPLRDRTAQAVLSLLGGRKGREAVEEHEVKELPDASAFGVEERNMVSGVLTLAERSIRSVMTPRGDVSWVNLNDSSEKMLQLLRETPHSMIPVCNDDLDNVVGIARSKDLIEDLVSRGKIDPDSMREAVVVPEAAGVLKAMETLKRSRGQLVLVVDEFGTVQGVLTPIDILEAIAGEFPDEDEQPDVEVLGPGHWRIDGATDLHYLEQVFETETLVSEDGEYNSLAGFLLAHFENMPAVGEVLELDDLRYEIVEADERRIACVDVRRIEPDHSL
>NZ_CP019510.1|WP_077401529.1|2107254_2107545_-|hypothetical-protein
MAYASPSPFQHLDAAVAAGAAAMPASDCLDPSVHAGLPGDSCDADECDNDPITLYPTSRQGAPFCAIIWQAGPGALAEADARQATRPPRVRHHITH
>NZ_CP019510.1|WP_077401532.1|2107829_2110673_+|insulinase-family-protein
MKPITALLLAAGILSPSFILAATPVEAAPVQKAGKAAPNRAAVKVTSVEGITEYRLANGLRVLLFPDASKPTLTTNIVYQVGSRHENYGETGMAHLLEHLLFKPSANFGVRKGTKTPVEILNSTGAQFNGTTWYDRTNYYATFPANDDNLRQMLAMEADRMVNAAIDQNDLWNPKTQKGEMTVVRNEFEMGESDPIGVTSERIQAVAYDWHNYGKSTIGARSDIEQVNIPRLRAFYHKYYQPDNAVLMVAGRFDEAKVLKQINELFGKIPKPTRVIEPTYTAEPVQDGERAVTVRRSGGTQFVGAGYHVAPSGNPDAVAIEVLGHVLTDAPAGRLHKALVETKLASKIEYNSVSNLEPGYNLFGALVPVDGNLDAAQAAMLKVLEDLKSQPVTDAEVARVKQQLNKQIELATSNTASLTIALTESLAAGDWRLFFLQRDQLDKLTTAQVQAAAEKYLKSSNRTLGRFIPTDAPDRTVVPAYADVAPQLAGYTGRAVVAQGEAFDPSPDNIEARTMRFTLPNGLKGALLPKKTKGSTVSVVLKLQIGSEENLRGKGQVGSYTANLLSRGTDKLSRQEVKDKFDQLGMQVAISGGAEGVTAMLTGKRENLPAAMDLLAQVLQKPALNETEFLELQRERVGRAEQELPEPQPLAVNAFRRLLDATPEGHVRHVATLPAELAQWKAIQVADVKAFHGAYYGASNATFAAVGDFDPAALKAQVASLYGSWKAQQPYVRIPDAVKPVSGEKVKLETPDKANSVLFAIQPIPLKDDAANYPALLIANHMLGGGALRSRLADRIRQKEGLSYGVGSQVSIPSREPAGYWMAYAISAPQNTVKVEAALREEIAKVLADGFTQDELTEAKKGWLQSEEVERTQDAGLARELAGYLAQDRTMAYNKDLEAKVAALTLAQVNQGLRDYLKPSAVSIVTAGDFAKVAKEGESGAKATTSK
>NZ_CP019510.1|WP_070304156.1|2110742_2111378_-|OmpA-family-protein
MLVIALAATGCADMSSTQRGTATGAGIGAGLGALIGGTTGGGSSGRTAGGALIGAAAGAVVGNIWSNRMENQKRAMEQATQGTGVQVSQTADNRLKMEIPSDISFDTNRADIKGNFRPILDRFAATLNENPNTTVSIIGHTDSTGSDSINEPLSVERAAHTRDYLSMRGVSPTRVVTEGRGAREPIASNADASGRARNRRVEIYVAELAPR
>NZ_CP019510.1|WP_010396376.1|2111602_2111749_-|lmo0937-family-membrane-protein
MLYTIAVVLIILWLLGLVTSYTIGGFIHILLVVAVIMVLLRLISGRGL
>NZ_CP019510.1|WP_077401535.1|2111930_2112173_-|hypothetical-protein
MEDDKTGSNRIWLGFIGGGLLATALGFCALDLAPPAGSPVFGVMLLLTGGMVSCLAGAVGMAGMLAWVPGMADEHADHSR
>NZ_CP019510.1|WP_077401538.1|2112337_2112991_-|glycine-zipper-2TM-domain-containing-protein
MTTTTKSLHPLVLAAAVAVLLFCGVGTAALMGWLPSSQGDTQPLAASTSAEQMANLQANQPPANLQPAGALPLAALPPQQQQQQQQQPVRQPQPQPQYAAAPAPQVCANCGVIEAIHEVNTRAEGSGVGAAGGAVVGGLLGNQVGGGHGKQLATVLGAVGGAVAGNQIEGSVRATRSYNIVVRLDNGKTRTVHQSAAPNWRQGDRVRVVNGGLRAMG
>NZ_CP019510.1|WP_171985143.1|2113231_2113954_+|Crp/Fnr-family-transcriptional-regulator
MGSPVGAPDAGNRLLASLPEHDLRHLTALFDSVTVEVGEVLYEPGQPIGHIYFPGDCLISLLAVAEGRMTLEVGSVGREGVLGASVALGHDLAQVRAVVQRSGTASRIARAEFCAEFAQLESLQRLLYRYTDTLLAQAIQIAVCSRFHVLEARLARSLLITRDRLQSEKFHLTHEFLAHTLGVRRVGVTKAASALQQQKLITYSRGNIEILDSAGLEAVSCRCYELVKDSGAIGMANVFV
>NZ_CP019510.1|WP_077401543.1|2114050_2114269_-|osmotically-inducible-lipoprotein-OsmB
MQIIKKIAATTSVAALLLSLTACANMSGQDKNTAIGAGVGAVAGSVLTGGSAIGAVGGAAVGGVIGNQVKPK
>NZ_CP019510.1|WP_077401546.1|2114446_2116483_-|AsmA-family-protein
MQLSRRQKIALASTAVLIALPVTAAVVLLNMDWNRAKPWLNARASDALGRPFAIEGDLALTWQQPTTAGQKTWRDYLPWPHLQAKDVRLGNPNAMADTGEQAQLASVSQLAFSLNPLALLDKKIIIPQLRFDTPQVRLLRSKDGKNNWTFDKQDQPSPWQLELQSVVFSKGTVTLDDGVSKTAMRADVDTIADDARYGIAWTLSGTYRGETVKGGGKAGGVLSLQRQGTPFPIQADMRASGSSVAIEGTLTRPTDLAALDVRLKLSGPSMARLYPLTGVLLPETPHFSTEGHLTGTLAPRGGEWVYDQFSGKVGSSDIQGKLAFSASTPRKRLTGEVHSRLLQFSDLGPLVGADSSASKKERGVPSTQPAGRVLPVETFKTERWTSLDADVRYTADKITRDAELPISKLDTHVVLTDGVLSLAPLNFNVAGGTLTSQIKLDGSGKVIANGIAAELKASARHLHIQQLFPRLPALQASVGEINGDASLSATGNSVATLLGSSNGEVRALINRGSISKLLLEEMGLNIGSVVLAKLSGDKQVRLNCMAADFAVTKGLMRTRQFIVDTDDAILNIDGTVNLADERLDLTLRPDSKGLRIFSLRSPLYVHGTFSKPDVSVDKGVLALRAGGALALAVVAPVAALLPLVNTGPVEDSECAALLAQARVKPVAPKPGKPVRKAR

Crispr_ID: NZ_CP019510_3

• CRISPR_ID: NZ_CP019510_3
• CRISPR_location: 2344950-2345058
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP019510_3

Consensus_repeat	Method
TCAAAGTCGCCTCGGGCGGCTTTTTTT	CRISPRCasFinder

spacers of NZ_CP019510_3

>3.1|2344977|55|NZ_CP019510|CRISPRCasFinder
ATTTCCGGAACATTTTCCGTCAACCTCCTTCAATAGCATATAAGTCACAAGATAT

CRISPR arrays and Neighbor proteins around NZ_CP019510_3

CRISPR arrays

The CRISPR arrays of NZ_CP019510_3

>merge|NZ_CP019510|3|2344950-2345058|CRISPRCasFinder
TCAAAGTCGCCTCGGGCGGCTTTTTTTATTTCCGGAACATTTTCCGTCAACCTCCTTCAATAGCATATAAGTCACAAGATATTCAAAGTCGCCTTGGGCGGCTTTTTTT

>NZ_CP019510|3|3|2344950-2345058|CRISPRCasFinder
TCAAAGTCGCCTCGGGCGGCTTTTTTT	ATTTCCGGAACATTTTCCGTCAACCTCCTTCAATAGCATATAAGTCACAAGATAT
TCAAAGTCGCCTTGGGCGGCTTTTTTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019510.1|WP_077402060.1|2353521_2354763_+|MFS-transporter	unknown	unknown	gnl|CDD|341031
NZ_CP019510.1|WP_077402035.1|2345177_2346254_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019510.1|WP_171984972.1|2350741_2351200_+|hypothetical-protein	unknown	unknown	gnl|CDD|182187
NZ_CP019510.1|WP_077402032.1|2342739_2344146_+|glutamate--tRNA-ligase	unknown	unknown	gnl|CDD|234953
NZ_CP019510.1|WP_077409049.1|2332417_2332897_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_CP019510.1|WP_077402021.1|2337020_2338706_+|alkaline-phosphatase-family-protein	unknown	unknown	gnl|CDD|293740
NZ_CP019510.1|WP_077402038.1|2346999_2348169_+|elongation-factor-P-maturation-arginine-rhamnosyltransferase-EarP	unknown	unknown	gnl|CDD|378385
NZ_CP019510.1|WP_077402029.1|2341757_2342669_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|236819
NZ_CP019510.1|WP_077402023.1|2338789_2340355_-|phospholipase-D-family-protein	unknown	unknown	gnl|CDD|197212
NZ_CP019510.1|WP_077402018.1|2336458_2336866_+|DUF4399-domain-containing-protein	unknown	unknown	gnl|CDD|373020
NZ_CP019510.1|WP_077402051.1|2351199_2351610_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379228
NZ_CP019510.1|WP_077402054.1|2351830_2352526_+|aquaporin-Z	unknown	unknown	gnl|CDD|235453
NZ_CP019510.1|WP_077402026.1|2340417_2341656_-|diaminopimelate-decarboxylase	unknown	unknown	gnl|CDD|236867
NZ_CP019510.1|WP_077402015.1|2332916_2335073_-|methionine--tRNA-ligase	unknown	unknown	gnl|CDD|234655
NZ_CP019510.1|WP_034758247.1|2348304_2348880_+|elongation-factor-P	unknown	unknown	gnl|CDD|234788
NZ_CP019510.1|WP_150130855.1|2350265_2350676_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019510.1|WP_077402057.1|2352563_2353394_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|380379
NZ_CP019510.1|WP_034758315.1|2335233_2336322_+|iron-sulfur-cluster-carrier-protein-ApbC	unknown	unknown	gnl|CDD|378455
NZ_CP019510.1|WP_034778041.1|2332100_2332310_-|DUF3460-family-protein	unknown	unknown	gnl|CDD|378768
NZ_CP019510.1|WP_150130854.1|2349087_2350236_+|hypothetical-protein	unknown	unknown	gnl|CDD|180715

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019510.1|WP_077402060.1|2353521_2354763_+|MFS-transporter	gnl|CDD|341031	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters. Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.48869e-101
NZ_CP019510.1|WP_171984972.1|2350741_2351200_+|hypothetical-protein	gnl|CDD|182187	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional.	2.3806e-12
NZ_CP019510.1|WP_077402032.1|2342739_2344146_+|glutamate--tRNA-ligase	gnl|CDD|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP019510.1|WP_077409049.1|2332417_2332897_-|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.56215e-09
NZ_CP019510.1|WP_077402021.1|2337020_2338706_+|alkaline-phosphatase-family-protein	gnl|CDD|293740	cd16016, AP-SPAP, SPAP is a subclass of alkaline phosphatase (AP). Alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity. Although SPAP is a subclass of alkaline phosphatase, SPAP has many differences from other APs: 1) the catalytic residue is a threonine instead of serine, 2) there is no binding pocket for the third metal ion, and 3) the arginine residue forming bidentate hydrogen bonding is deleted in SPAP. A lysine and an asparagine residue, recruited together for the first time into the active site, bind the substrate phosphoryl group in a manner not observed before in any other AP.	4.8247e-177
NZ_CP019510.1|WP_077402038.1|2346999_2348169_+|elongation-factor-P-maturation-arginine-rhamnosyltransferase-EarP	gnl|CDD|378385	pfam10093, EarP, Elongation-Factor P (EF-P) rhamnosyltransferase EarP. This entry includes family members such as EarP enzymes which are essential for post-translational activation of elongation factor P(EF-P). It was identified as EF-P arginine R32 specific rhamnosyl transferase in Shewanella oneidensis using dTDP-beta-L-rhamnose as donor substrate. This was further confirmed for Pseudomonas aeruginosa, Pseudomonas putida, and Neisseria meningitidis. As for S. oneidensis and P. aeruginosa, EarP enzyme acts as an inverting glycosyltransferase, thus mediating the formation of an alpha-L-rhamnosidic linkage. Structural analysis show that EarP is composed of two opposing domains with Rossmann folds, thus constituting a B pattern-type glycosyltransferase (GT-B) and provide basis for arginine glycosylation by EarP. Mutational analysis of efp and earP genes, resulted in a substantial decrease in the production of rhamnolipids and pyocyanin (important factors for colonization and invasion during infection) of P. aeruginosa. Collectively this indicates that EarP and EF-P are essential for P. aeruginosa pathogenicity.The protein family is also annotated in the CaZy Database as GT104.	0
NZ_CP019510.1|WP_077402029.1|2341757_2342669_+|LysR-family-transcriptional-regulator	gnl|CDD|236819	PRK11013, PRK11013, DNA-binding transcriptional regulator LysR; Provisional.	0
NZ_CP019510.1|WP_077402023.1|2338789_2340355_-|phospholipase-D-family-protein	gnl|CDD|197212	cd09113, PLDc_ymdC_like_2, Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins. Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins. In Escherichia coli, there are two genes, f413 (ybhO) and o493 (ymdC), which are homologous to gene cls that encodes the Escherichia coli cardiolipin (CL) synthase. The prototype of this subfamily is an uncharacterized protein ymdC specified by the o493 (ymdC) gene. Although the functional characterization of ymdC and similar proteins remains unknown, members of this subfamily show high sequence homology to bacterial CL synthases, which catalyze the reversible phosphatidyl group transfer between two phosphatidylglycerol molecules to form CL and glycerol. Moreover, ymdC and its similar proteins contain two HKD motifs (H-x-K-x(4)-D, where x represents any amino acid residue) that characteriszes the phospholipase D (PLD) superfamily. The two motifs may be part of the active site and may be involved in phosphatidyl group transfer.	3.39912e-102
NZ_CP019510.1|WP_077402018.1|2336458_2336866_+|DUF4399-domain-containing-protein	gnl|CDD|373020	pfam14347, DUF4399, Domain of unknown function (DUF4399). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 135 and 1079 amino acids in length.	3.25024e-44
NZ_CP019510.1|WP_077402051.1|2351199_2351610_+|GNAT-family-N-acetyltransferase	gnl|CDD|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.664e-11
NZ_CP019510.1|WP_077402054.1|2351830_2352526_+|aquaporin-Z	gnl|CDD|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	5.60077e-142
NZ_CP019510.1|WP_077402026.1|2340417_2341656_-|diaminopimelate-decarboxylase	gnl|CDD|236867	PRK11165, PRK11165, diaminopimelate decarboxylase; Provisional.	0
NZ_CP019510.1|WP_077402015.1|2332916_2335073_-|methionine--tRNA-ligase	gnl|CDD|234655	PRK00133, metG, methionyl-tRNA synthetase; Reviewed.	0
NZ_CP019510.1|WP_034758247.1|2348304_2348880_+|elongation-factor-P	gnl|CDD|234788	PRK00529, PRK00529, elongation factor P; Validated.	2.89303e-79
NZ_CP019510.1|WP_077402057.1|2352563_2353394_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.05863e-33
NZ_CP019510.1|WP_034758315.1|2335233_2336322_+|iron-sulfur-cluster-carrier-protein-ApbC	gnl|CDD|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	1.96587e-144
NZ_CP019510.1|WP_034778041.1|2332100_2332310_-|DUF3460-family-protein	gnl|CDD|378768	pfam11943, DUF3460, Protein of unknown function (DUF3460). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 70 amino acids in length. This protein has a conserved WDK sequence motif.	3.40138e-22
NZ_CP019510.1|WP_150130854.1|2349087_2350236_+|hypothetical-protein	gnl|CDD|180715	PRK06828, PRK06828, amidase; Provisional.	1.529e-51

Protein sequences

>NZ_CP019510.1|WP_077402032.1|2342739_2344146_+|glutamate--tRNA-ligase
MTTTATPVRTRFAPSPTGYLHLGGARTALYSWAYARHFGGTFVLRIEDTDVERSTPEAVQAIIEGMKWLGLDHDEGPFYQMQRMDRYREVVAQMLLEGTAYHCYSSPEEVEAMRERMRAAGEKPRYDGTWRPEPGKTLPAIPADRKPVVRFKNPLDGDVTWDDVVKGTITISNRELDDLVIARPDGTPTYNFCVAVDDWDMQITHVIRGDDHVNNTPRQINILRAIGAPLPLYGHLPMILGADGEKLSKRHGAVSVMDYPAQGFLPEAMLNYLARLGWSHGDDEVFSTEQFCEWFNLNHLSKSAAQFNNEKLAWLNNHYIKQADNTRLADLARPQMTAAGAVFEGAPDLAQVLGMMKERANTVNELAAASMLFFREPQPEAELVAQHITDAIKPVLAQFAERIATVEWSKEAVAAMIKEVLAANTIKMPLLAMPLRLILTGQLQTPAIDQVVVIFGRDTVLARLAKWL
>NZ_CP019510.1|WP_077402029.1|2341757_2342669_+|LysR-family-transcriptional-regulator
MTISLRHIEVFRAIMTTGSVTAAAAMLHTSQPTVSRELARLEHLTDLTLFERERGRLRPTAQALQLFEEVQRAYFGLERIISTAAALRQFDQGQLSIACLPVFSQSLLPQACKRFVADFPKVSISITPQESPLLEEWLSAQRHDIGLTEVGNAPPGTALDTLMSVDEVCVLPDGHPLAGKMTLAPADFAGQPFISLAAVDPYRQQIDAIFAQAGVERRMALDTHSAASVCAMVREGVGLAIVNPLTALDYAEQGLQIRRFAVSLPFTVNLVKPLHRPLSQLVALFEQALHAQADEVKRRLLQL
>NZ_CP019510.1|WP_077402026.1|2340417_2341656_-|diaminopimelate-decarboxylase
MKPVTDQTLAQLAQEHGTPLWVYDAATIRARVAQLAQFDTVRFAQKANSNIHLLTLMREAGVHVDAVSLGEIERALQAGFTPAQTNGAAGVVFTCDLFDRATLARVAAAKIEVNCGSVDMLRQLGPVSPGHRVWLRINPGYGHGHSNKTNTGGENSKHGIWHEELPEALAVIRAHGLHLVGLHMHIGSGVDYSHLETVCGTMVELVKNMGHDIEAISTGGGLSVPYREGEQPVDTDHYFQLWDAARKQIEAHLGHPVHLEIEPGRFLVADAGLLVAEVRTTKQMGGNHFTLLDTGFNELMRPAMYGSYHEMSVIAHDGRALDTQRATVVGGPLCESGDVFTQRDGGVVETRLLPAAQVGDYVVFEGAGAYGASMSSNYNSRPHAAEYLVDGAQSRLIRRRQTVAELIALEQL
>NZ_CP019510.1|WP_077402023.1|2338789_2340355_-|phospholipase-D-family-protein
MPAQALPFRSTTRLLLPLLLSAVLAGCATLPSLDSRIPSTVITDTADTRLATAIAPMVAQHPGVSGIYPLADGRDAFAARALLAAAAQRSLDVQYYIWHKDITGTLLFDALRQAAERGVRVRLLLDDNNTAGLDQTLTMLGKQRNLEIRLFNPFVPRAPRALAFATDFSRLNRRMHNKSFTADNQATIVGGRNVGDEYFGAAGDVLFADLDVLAVGPVVDDVSRDFDRYWNSASAYPASLLLTSPVEGDAATIAAEADRIDDTRAAEAYVQALRTSPFVKQMMERTLPFEWARTRMVSDDPAKVLDQARPGTGVADNLRNLLGVPEKEVDLVSPYFVPGKAGTQAFADLASKGVGVRILTNALEATDVAAVHAGYAKWRKPLLEAGVLLYESRRSWEAGDAREQTGRFGSSASSLHAKTFAVDDRRIFVGSFNFDPRSIDLNTEMGLVIDSPALASQLGQAMRTTIPQRAYQVLLGDDGALYWIARDASGAATRYDTEPGASVWKRMGVAILSVLPIDWLL
>NZ_CP019510.1|WP_077402021.1|2337020_2338706_+|alkaline-phosphatase-family-protein
MTKHFSLSRQLAQALLLAAGVAASQAHAAKAVPAASAGAAQPKLVVVLVVDGLPQEQVTRYRDQFGQGGFRRLLEQGAWFSDAHQAHGITVTAIGHSAVLSGAYPYQHGVIGNNWIDPVTKKSVYCTEDGNFHYIGEETQPDDGTAPTKLRVSTLGDELRYSTGDQAKVVTVSGKDRGAILLAGKTGTAYMYMEKTGNFASSTYYMQQHPQWVQRYQAAKPQDRYYGKSWTPLLADSAYARDARDDLVPAKPGTRNTFPFAYYSDSGKLDGEYYSRLKSGPFLDELTLEFARAAIDGENLGRNPAGVPDILGVSLSAHDYVNHAYGPESKMSHDHLQRLDRMLASFFLDLDKKVGMDNVLVVLTADHGFANVPEFAETRGFSAKRIDGAKLVDALNQHLATSLGIDKLVTSSSLPNIYLDYALAEKGGVHRAALEDAAARFLQQQDGLAQVYTRTQMETGAVATRMDTLMRRAWNRQLSGDLMVVTKPAWYFGKGSGGTSHGTPYTYDTNVPLMVFGPRWIKPGVYGQYAEVVDIAPTLAHLLRVRQPSASEGRILTEAVR
>NZ_CP019510.1|WP_077402018.1|2336458_2336866_+|DUF4399-domain-containing-protein
MQLTTVFLRQAAVLLAGSLLAASAFAQSVSFVEPVDGATVTSPFKVKFAVSGMDVKPAGDMTAKTGHHHLLINMGPMTAGEMIPMDDKHLHFGKGQTETDVTLPPGQYTLTMQFANGAHQSYGPELSKSIKVTVK
>NZ_CP019510.1|WP_034758315.1|2335233_2336322_+|iron-sulfur-cluster-carrier-protein-ApbC
MSITVEDVKAALAQVIDPNTHKDFVSSKTVKNLKVDGDDISLDIELGYPAKSQIDLIRKSVLAALRVLPGVGNVSVGVSSKIISHTVQRGLKPMSNVKNIIAVASGKGGVGKSTTAVNLALALAAEGATVGMLDADIYGPSQPMMLGISGQPKTLDGKSMEPMENHGLQVSSIGFMIDPDEPMVWRGPMVTQALQQLLDQTNWRDLDYLIVDMPPGTGDIQLTLSQKVPVTGAVIVTTPQDIALLDARKGLKMFEKVGIPILGVVENMSTHICSNCGHAEEIFGAGGGAKMCADFGVEFLGALPLTMAIRQQTDSGTPTVVAEPEGPVAVIYKQIARTIAIKVAEKAKDMTSKFPSIVIKND
>NZ_CP019510.1|WP_077402015.1|2332916_2335073_-|methionine--tRNA-ligase
MTRKLFVTTALPYANAAFHIGHIMEYIQADIWVRFQRMQRDGAAGREVHFVGADDTHGTPIMIAAEKEGITPQQFVANIAAGRAQYLDGFHIAFDNWYSTDSPENVDLSQSIYRKLRDTGLIVTKTVDRFFDPVKGMFLADRNIKGECPKCGAKNQYGDNCEVCGAAYQPTDLVNPFSVFTNATPVMKPSEQYFFKLSDPRCFEFLKSWLNTPGRLQPEMVNKVSEWLGEAGEKLADWDISRDAPYFGIPIPDAPGKFFYVWMDAPVGYLASLKNYCDKKGLDFDALLNDPATEQIHFIGKDIVSFHLLFWPAMLKFAGHPVIDKLKVNVHGFLTVNNEKMSKSRGTGISPLRYLDLGMNPEWLRYYIAFKLNSKVEDLDFNGEDFVARVNSDLIGKYVNIASRCAGFIAKRFDGKLASTLSEGAQSWINRALTVDVNGVIVERQASIAAHFENREFGKALREIMEIADITNQYVDENKPWILAKDVEKTAELHDVCTTALILFRQLTILLSPVLPGVAKNVASFLNDAEFTWADTQVFGDAVSNSMLGRTIGAYSHLMTRMDAKMIEALFDAPQAAAIAAPAGDAANDAAAPAAAAAAAIEELAPEIKIDDFLKVDLRIAKIVNCELVDGSDKLLRLTLDAGEGRLRNVFSGIRSAYQPEELIGKLTVLVANLAPRKMKFGISEGMVMAASSADEKANPGIYILNPWPGAEPGMRIR
>NZ_CP019510.1|WP_077409049.1|2332417_2332897_-|GNAT-family-N-acetyltransferase
MNIVVREATNADAQLIAELTRAAWAGKVAASSSGHHETAQQVEEQLRHGGGFLLLIDDIPAGSLRWMPLDSDPAIWKISRMGVLPAYRGSHVSQHLLEAIIHHGLSCQAEELRLAVRRDQRKLIDFYAAFEFDLAEELEYSHANPAEPAPMVMRRLLRY
>NZ_CP019510.1|WP_034778041.1|2332100_2332310_-|DUF3460-family-protein
MKLPAKHNNYVSDHTLFIAELKAKNPGMEAGQQAGRALLWDKPAVSIDEQERQLASAVKQQAYVYQNKN
>NZ_CP019510.1|WP_077402035.1|2345177_2346254_+|hypothetical-protein
MHRVFVSFFLAAVIHVPVHAEAPPAAKFDPGVLKLQKGPFNDVLVLGSPHLVQLPTSFDPSQLSLLNERLAGWRPNAIAIEALSGLQCAYLRAYPQRYGDTVKAYCYDTSAARAATGLDVVAATAQAERLLAAWPAAPSAAQRRTLASLFLAGGERASALVQWLRLPVDERRAGDGVSEPLAVNLNSLLGQRNESYQIAAVLAAKGGHERVHGMDDHTSDMPVDDEKAYAKAIRAAWNNSFSAERKRIHAGFEGQWSTPAGVLAIYRAYNGRAEADLAFRGDFGAALEEPSPQRYGRNYVASWEVRNLRMASNIREIMAARPGMRVLVIVGASHKGYLDAYLSQMHDVRIANADDILR
>NZ_CP019510.1|WP_077402038.1|2346999_2348169_+|elongation-factor-P-maturation-arginine-rhamnosyltransferase-EarP
MPLATDRAPTLAIFCKVVDNYGDIGICWRLARQLNGEHGVAVTLWVDDLPSFQRICPEIDVAAEAQHVSGVAVRHWRGQDGVFAPADIADIVIEFFACDIPPGYIAAMAQCSPHPVWLNLEGLTAEEWVEGCHALTSPRHGMIKHFFFPGFTDKTGGLLREAALDEKRLAFQADAGAMRAFLGQFGVTAAEMSALKVSLFCYPSAPVAELFAAWQAGSEPMTCLVPEGVAFDAVQAFIGDDAAVAGAARTRGALTVRVLPFVPQDDYDRLLWACDVNCVRGEDSFVRAQWAGRPFLWHIYLQDENLHHVKLRAFLQRYAVDADGAIDSLVQAALAWNGASADALPWVQLWPALQADLPRIGARAQAWQRQMQANGDLASNLLAFAGATR
>NZ_CP019510.1|WP_034758247.1|2348304_2348880_+|elongation-factor-P
MKPAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNTPMENVFRGDDKFDVVVLDKKPVTYSYFADPLFVFMDTEYNQYEIEEENLGEALNYLKDGMECEAIFYDGKAISVELPTTIARQVVYSEPAVKGNTSGNVLKEAKIENAIDAHRHTVQVPLFVAQDDVIEIDTRTNEYKRVVRN
>NZ_CP019510.1|WP_150130854.1|2349087_2350236_+|hypothetical-protein
MQRSQMLRSGAPRSVARPVLARATAPASPMAHLLDAGVLPQQQMMQAGKLSSHALTSQYLGRIRSLCSIGARAYPGIEINPDALKIALEMDRERQVHKVRGPLHGIPVVLRDNIATGDRMKTRTQAPLATHASCDSFVAARLRAAGAVIIGKSNLRQWAAVSVPHASASWAGLTILAVDSAADGSIVAPASNCGLVAIKPTGRTAEGQGGEPATAGPMAPSVREAAWLLAALSGERLADGVVLDAAGLHGRRIGVARSLFGLCAGTDAVIGQALLALREQGAELIEMPPAPEPGGIEALLGSHSLDALVGPTCHGVAQAPSALPHITVPAGVAGGLPVGLSFIGPAHGDMQLIAMAYAYEQATLHRRTPALPSSITLALRLP
>NZ_CP019510.1|WP_150130855.1|2350265_2350676_+|hypothetical-protein
MLATLLLTAAVTAIPTPFDAAQLSGSWSDSVNTNSVCEEARHFTRMQLSDDHQRLAIFSDRTWKSKLGETNRFAATVVAETEYSLTLRYDNETRLNAAGKLVEWQLIIVAPGVYRWRETGWAEGKVNGVVGIRCSP
>NZ_CP019510.1|WP_171984972.1|2350741_2351200_+|hypothetical-protein
MSARLLLPLFLGAAVALATLTAHARTPQLSLIEQAQSCDGGHTCPYFPDVYKADYAFRKAFNIGLKKAGLKRQRWVPNGVASPLKPVEIDGKARLLSSVCEPHNCGHRYSILYDPAERSMTGVYIGSDGKGGSRTVYFGEPSIAEADLLFKN
>NZ_CP019510.1|WP_077402051.1|2351199_2351610_+|GNAT-family-N-acetyltransferase
MHAPLRISSERGELDVDMIHRYLSEQSYWKRGVALETVRKGIANALCFGGYVDGQQVAFARVITDYTDFAYLRDVFVLPQYQGRGYGKQIVAAVLGDARVRDVVWMLGTDDAHGLYASFGFAPLEAPHKYMRRPAS
>NZ_CP019510.1|WP_077402054.1|2351830_2352526_+|aquaporin-Z
MKQYGAEFLGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAYAIGHISGCHLNPAVSIGLWAGGRFPANQLLPYIIAQVLGAIVAGGVLYVIASGQAGFDVSKGFASNGFGAHSPGGYSMLSALVIEIVLTMFFLIVILGATDRRAPAGFAPLPIGLALTLIHLISIPVTNTSVNPARSTGVALYVGDWATSQLWLFWLAPIIGALLGALAYRLIAGEKESA
>NZ_CP019510.1|WP_077402057.1|2352563_2353394_-|helix-turn-helix-transcriptional-regulator
MYTQQPAQTHPDGVPFSRSTSSHDYQHVPRPVTAMSRQYAAGDYTAPHSHVRAQLLYATEGVMRVSTEHGVWILPPRRALLIPVGVVHEVHILSELSMRTVYIDAQVAAQYGADCKVLEVSRLLRELILALLAEPIEYALAGRGDWLAHLILSELTAADTVPIAIPWPRDRRLVAVCSAIMDAPGSRRSIEDWAQDAGASARTLIRLFPKETGLHYRQWLQQVHLAEAFCRLDRGEGVAAIAYALGYASPSAFSAMFRRILGRTPQHYLSEWRAAD
>NZ_CP019510.1|WP_077402060.1|2353521_2354763_+|MFS-transporter
MHTTTPAPALATPVPAAPSLHSSQQQSGLAMHILGAVAFVHLLNDLIQALLPSIYPMLKAEFSLSFTQVGLITLTFQCTASLLQPWIGLYTDRRPLPFLLPVGMCFTLAGVLMLSIVSTFPTLLIAAGLIGVGSSTFHPEASRVARMASGGRYGFAQSLFQVGGNVGSALGPLLAAAVIVNRGHGNIAWFSLLAVLAIGVLYKVSHWYSGHLASFKPKTGGHGPNLSRNKVIGALGVLALLVFSKYIYMASLSSYYTFYLIDKFHLSLGDAQLYLFLFLAAVAAGTFMGGPIGDRIGRKRVIWISILGAAPFTLLLPYVDLLWTAVLTVIIGFVISSAFSAIVVFAQELVPGKVGMIAGIFFGLMFGVSGIAAAAMGHLADVSGIAYVYKICSYLPLLGILTVLLPHIEQAKK

Crispr_ID: NZ_CP019510_4

• CRISPR_ID: NZ_CP019510_4
• CRISPR_location: 2892131-2892225
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas3

Consensus repeat of NZ_CP019510_4

Consensus_repeat	Method
CCGCGCCTGGAAGAGGCGGCCGA	CRISPRCasFinder

spacers of NZ_CP019510_4

>4.1|2892154|49|NZ_CP019510|CRISPRCasFinder
GCAGGCGCGCATGGACCTTGCCAAGGCGCAATTCAAGCTTGAAGGCATC

CRISPR arrays and Neighbor proteins around NZ_CP019510_4

CRISPR arrays

The CRISPR arrays of NZ_CP019510_4

>merge|NZ_CP019510|4|2892131-2892225|CRISPRCasFinder
CCGCGCCTGGAAGAGGCGGCCGAGCAGGCGCGCATGGACCTTGCCAAGGCGCAATTCAAGCTTGAAGGCATCCCGCGCCTGGAAGAGGCTGCCGA

>NZ_CP019510|4|4|2892131-2892225|CRISPRCasFinder
CCGCGCCTGGAAGAGGCGGCCGA	GCAGGCGCGCATGGACCTTGCCAAGGCGCAATTCAAGCTTGAAGGCATC
CCGCGCCTGGAAGAGGCTGCCGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019510.1|WP_077403249.1|2882419_2883373_-|cation-transporter	unknown	unknown	gnl|CDD|224151
NZ_CP019510.1|WP_077403269.1|2892646_2893594_+|cupin-like-domain-containing-protein	unknown	unknown	gnl|CDD|372651
NZ_CP019510.1|WP_077409086.1|2898346_2899351_-|tryptophan--tRNA-ligase	unknown	unknown	gnl|CDD|183400
NZ_CP019510.1|WP_077403281.1|2896627_2898217_-|glutamate-decarboxylase	unknown	unknown	gnl|CDD|274791
NZ_CP019510.1|WP_077403293.1|2903488_2904769_-|TCR/Tet-family-MFS-transporter	unknown	unknown	gnl|CDD|340946
NZ_CP019510.1|WP_077403265.1|2890791_2891409_+|LON-peptidase-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|225362
NZ_CP019510.1|WP_077403251.1|2883489_2884365_-|pirin-family-protein	unknown	unknown	gnl|CDD|224655
NZ_CP019510.1|WP_150131115.1|2893705_2894614_+|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl|CDD|377122
NZ_CP019510.1|WP_077409085.1|2889501_2890740_+|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	gnl|CDD|236722
NZ_CP019510.1|WP_077403287.1|2901701_2902559_-|EamA-family-transporter	unknown	unknown	gnl|CDD|274527
NZ_CP019510.1|WP_070311835.1|2884422_2885022_-|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl|CDD|234675
NZ_CP019510.1|WP_077403258.1|2886059_2886908_-|phosphatidylserine-decarboxylase	unknown	unknown	gnl|CDD|234591
NZ_CP019510.1|WP_077403254.1|2885136_2886042_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|176114
NZ_CP019510.1|WP_077403275.1|2894610_2895342_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NZ_CP019510.1|WP_077403246.1|2881531_2882041_-|SMI1/KNR4-family-protein	unknown	unknown	gnl|CDD|226732
NZ_CP019510.1|WP_077403243.1|2879848_2881513_-|ECF-transporter-S-component	unknown	unknown	unknown
NZ_CP019510.1|WP_077403261.1|2887042_2889382_+|TonB-dependent-receptor	unknown	unknown	gnl|CDD|238657
NZ_CP019510.1|WP_077403278.1|2895338_2896592_-|voltage-gated-chloride-channel-family-protein	unknown	unknown	gnl|CDD|239654
NZ_CP019510.1|WP_077403284.1|2899743_2901705_+|CocE/NonD-family-hydrolase	unknown	unknown	gnl|CDD|225487
NZ_CP019510.1|WP_077403290.1|2902566_2903388_-|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|366132

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP019510.1|WP_077409085.1|2889501_2890740_+|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	6.2e-12	39.9	0.3

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019510.1|WP_077403249.1|2882419_2883373_-|cation-transporter	gnl|CDD|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	2.43287e-98
NZ_CP019510.1|WP_077403269.1|2892646_2893594_+|cupin-like-domain-containing-protein	gnl|CDD|372651	pfam13621, Cupin_8, Cupin-like domain. This cupin like domain shares similarity to the JmjC domain.	5.07354e-38
NZ_CP019510.1|WP_077409086.1|2898346_2899351_-|tryptophan--tRNA-ligase	gnl|CDD|183400	PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed.	0
NZ_CP019510.1|WP_077403281.1|2896627_2898217_-|glutamate-decarboxylase	gnl|CDD|274791	TIGR03799, NOD_PanD_pyr, putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent). [Biosynthesis of cofactors, prosthetic groups, and carriers, Pantothenate and coenzyme A].	4.65059e-145
NZ_CP019510.1|WP_077403293.1|2903488_2904769_-|TCR/Tet-family-MFS-transporter	gnl|CDD|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.99508e-123
NZ_CP019510.1|WP_077403265.1|2890791_2891409_+|LON-peptidase-substrate-binding-domain-containing-protein	gnl|CDD|225362	COG2802, COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease [General function prediction only].	1.78099e-34
NZ_CP019510.1|WP_077403251.1|2883489_2884365_-|pirin-family-protein	gnl|CDD|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	6.8798e-88
NZ_CP019510.1|WP_150131115.1|2893705_2894614_+|ADP-ribosylglycohydrolase-family-protein	gnl|CDD|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	1.81098e-75
NZ_CP019510.1|WP_077409085.1|2889501_2890740_+|DEAD/DEAH-box-helicase	gnl|CDD|236722	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional.	7.37333e-159
NZ_CP019510.1|WP_077403287.1|2901701_2902559_-|EamA-family-transporter	gnl|CDD|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	8.03979e-32
NZ_CP019510.1|WP_070311835.1|2884422_2885022_-|NAD(P)H-dependent-oxidoreductase	gnl|CDD|234675	PRK00170, PRK00170, azoreductase; Reviewed.	2.8509e-78
NZ_CP019510.1|WP_077403258.1|2886059_2886908_-|phosphatidylserine-decarboxylase	gnl|CDD|234591	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed.	0
NZ_CP019510.1|WP_077403254.1|2885136_2886042_+|LysR-family-transcriptional-regulator	gnl|CDD|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.00061e-65
NZ_CP019510.1|WP_077403275.1|2894610_2895342_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.99577e-25
NZ_CP019510.1|WP_077403246.1|2881531_2882041_-|SMI1/KNR4-family-protein	gnl|CDD|226732	COG4282, SMI1, Protein involved in beta-1,3-glucan synthesis [Carbohydrate transport and metabolism].	1.46252e-23
NZ_CP019510.1|WP_077403261.1|2887042_2889382_+|TonB-dependent-receptor	gnl|CDD|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	3.30609e-51
NZ_CP019510.1|WP_077403278.1|2895338_2896592_-|voltage-gated-chloride-channel-family-protein	gnl|CDD|239654	cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins. This ClC family presents in bacteria, where it facilitates acid resistance in acidic soil. Mutation of this gene (sycA) in Rhizobium tropici CIAT899 causes serious deficiencies in nodule development, nodulation competitiveness, and N2 fixation on Phaseolus vulgaris plants, due to its reduced ability for acid resistance. This family is part of the ClC chloride channel superfamiy. These proteins catalyse the selective flow of Cl- ions across cell membranes and Cl-/H+ exchange transport. These proteins share two characteristics that are apparently inherent to the entire ClC chloride channel superfamily: a unique double-barreled architecture and voltage-dependent gating mechanism. The gating is conferred by the permeating anion itself, acting as the gating charge.	0
NZ_CP019510.1|WP_077403284.1|2899743_2901705_+|CocE/NonD-family-hydrolase	gnl|CDD|225487	COG2936, COG2936, Predicted acyl esterases [General function prediction only].	1.67456e-122
NZ_CP019510.1|WP_077403290.1|2902566_2903388_-|transporter-substrate-binding-domain-containing-protein	gnl|CDD|366132	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3.	9.7883e-09

Protein sequences

>NZ_CP019510.1|WP_077403265.1|2890791_2891409_+|LON-peptidase-substrate-binding-domain-containing-protein
MTSIPLFPLNTVLYPDGYLPLQIFEVRYLDMIRQCIMGEQPFGVVQLLDGAEVRKPGQQETLAPVGTLARIVDWAAPLSGLLQIKCMGMQRFHIVSSEQLKHGLWVARIETLAPDKTIPIPQEQQNVADALGALIRTLQEQKIPPDQMPLQPPYRLDECGWVANRWCELLSLNAMQKQLLLSQDNPVLRLELVQDMLTENGLLEE
>NZ_CP019510.1|WP_077409085.1|2889501_2890740_+|DEAD/DEAH-box-helicase
MTFSSLGLIDPLVRKLDELGYAKPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLLQRLTLEGVVAPQCVRVLVLVPTRELAEQVYASFRSYGGNLPLRSFVAYGGVPIEPQISKLRKGLDVLVATPGRLLDLQTQGAVKFEQVQTLVLDEADRMLDLGFERELDILLMTMPKQRQTLLFSATFSDAIRAMAKTMLKDPISVEVSARNSTVKAVKQSVIVCDKKRKPELFLHLLKKKRWGQVLVFVKTRKGVELLVNTLLEQGVRADSIHGDKTQPNRLRALARFKSAEVQVLVATDVAARGLDIDQLPVVVNFDLPTVAEDYIHRIGRTGRAGASGEAISLVCADEVELLSAVEALTRQTLKRNEEPGFEAEHRVPGTSAGGTIQKKAVKVLAPKAAERAKKRRFYK
>NZ_CP019510.1|WP_077403261.1|2887042_2889382_+|TonB-dependent-receptor
MFSGNCATRKKLQHNTAACFLAFSHFYSANFFSQVMMPRRCLRLTVLCSAVLLAWNVQAQQSETPAADAAAAPLKAEKAEKFTAPAMQTVEVKGSGYDPRRDDTASKMVVSSEEILKYGDSNVTDVLKRLPGITVSGAAGRTGGEIRMRGLGSGYTQILLNGERAPAGFSLDTLSPDVIERIEILHAASAEYSTQSIAGTINVVLKKAVKTAQRELKLGVQGSDVSFSPSVNLQLSDRDGNFSYSLAASLFRYDYHYDNPGVELGYAPDGRQNLLRRTNGTGDGRPEGINLSPRLNWVLANGDNVTAQFFFNGGRSNHRNFSRAETELGLRPDYDTNTGSSSNHNAFGRSDLTWMHKLAGGAKLELKIGASAARNTSDSLQQGFIDGSGLALERKVGVKATENGVSSTGKYSAPLLPGHALSMGWDGAYTEREETRRQREAALSALGVRPPVDSDEGFDATIQRLALFVQDDWEITPRWSMYAGVRWEGIDTRSAGDTYDEVNQRTSVWSPLLQTLWKLPDTKGDQVRLALTRTYKAQPTSSLIPRRNTSTNNSQTDPDREGNPYLKPELALGIDASYEHYWAEGALLSARASARRIDGYTRQGLLFINDRWVSTPVNDGRANTQTLELEAKFPLRAVLAAPVPAIDLRASVSRNWSQVEQVPGPNNRLDQQTPVSGNFGLDYKTPDGMLTTGGSFNFRNGGPVRITERQSAYTSPRRDLDIYALWKFDAKNQLRLAVSNLLAQDFESTTTYADASGTIVRNSISPSSPQARATLEMKF
>NZ_CP019510.1|WP_077403258.1|2886059_2886908_-|phosphatidylserine-decarboxylase
MSDRLAVLPQYLLPKGALTNFAGRIAGAKGGAMTTRLIRWFVGRYNVNMDEALDPDITHYASFNDFFTRALRPDARPLAQADYVCPVDGRISQFGTIDKDQIFQAKGHHFSTTALVGGDAALAAQFEHGSFANLYLSPRDYHRIHMPCDGRLTRMIYVPGELFSVNPTTARGIPGLFARNERVVCVFDTANGPFVMTLVGATIVGSMATVWHGVVNPPRTGEIRDWSYANDNVVLKQGEELGRFLLGSTVVMLFPKDTVQFNANWQPAGPVQLGEVMGNVPS
>NZ_CP019510.1|WP_077403254.1|2885136_2886042_+|LysR-family-transcriptional-regulator
MDIDPGDLLLFARVVECGSFSRAAVRVDLPKSTLSRRISLLEAKLGERLLLRTTRKLALTEFGASLLEHARKVVEETEAAGALAQHRQAGPSGLLRISMPADFGDTLMRQVLAEFVRRYPAISLELDLSARRVDLLEENFDLAIRMGNLPDDASLAARRVAFSTLALYASPQYTSVHGLPEHPDDLYGHDLLSLPRAVHGLVHWTLIRGKTTWERDLPVRLLANSPELLVRMACTGVGIAASTDRFAKAYVATGELVRVLPEWSFPLVTGWAVFPGRRLMPAKTRAFLDLMEEMYRTDAPV
>NZ_CP019510.1|WP_070311835.1|2884422_2885022_-|NAD(P)H-dependent-oxidoreductase
MNILQINSSARSTGSASTRLADAIVARVQAANPGATLARRDLAAQPHPVLDEPTLQALFTPADKRTPEQAARIALDDALIAQVQAADVIVIGAPMYNFGITVQLKSWFDAIARANVTFKYTENGPVGLLTGKKVYVGLSRGGLHRDSANDSQVPYLNTMFGFLGLTDVQYVYSEGMGMGPEAVAKAQAQADAEINAILV
>NZ_CP019510.1|WP_077403251.1|2883489_2884365_-|pirin-family-protein
MSDTTTVNKPRAVERVIAGQAVMDGAGVKINRVLTQQLQRRLDPFLMLDNFASDKPNDYIAGFPEHPHRGFETVSYMITGRMRHKDSAGHEGLLTSGGVQWMTAGSGVIHSEMPEQEEGVMEGFQLWLNLPARDKMRTPWYRDFDSSEIPRYTTDAGVTVQVIAGTSHGVKGAVQRELTEPLYLDIDLPAGSSFEQPLPPGHNAFIYTFRGEVQVDGKAVPALRMAIFANTPGSDGVRIEAPQGGRVILVAGQPLNEPIAQYGPFVMNTQAEVFQAVQDFREGKFGETAAQ
>NZ_CP019510.1|WP_077403249.1|2882419_2883373_-|cation-transporter
MQPTHTEHDATHLHAHLKGDAKHTHSFEGRSQSILAWALGLTLSFAGIEVAAGFLSNSLALISDAGHMVTDAAALGLALLAQLIARRPPSPRHSFGFGRAEALAAFVNGLAMLCVVGWICYEAVLRFSSPQPVKGGMVFIVAFIGLAINIVVAWVLSKDKQSVNTRAALVHVMGDLLGSVAAIIAGAVIYFTGWMQIDPLLSVLVSLLILKSTFGVLRESYHFLMEGVPMHIDYIEVGTDVEQVDGVIAVHDLHVWDMSPGQPALIGHVEIEHLDHWPKVLRAIKKMLLAKHGIDHITLQPETAAMAGLHADDKTHR
>NZ_CP019510.1|WP_077403246.1|2881531_2882041_-|SMI1/KNR4-family-protein
MKLQWAVLEDWLKKNNPRLWTDLNPPATDEKIRDFQHKVGISLPPDFITCLKRHDGQKGQAEWLFSGYEFLSIDNILLTWLAWNDLLADGDFDDRLPKANDGVENVWWSDAWIPFASNGGGKNLCLDMRPSRSGNVGQVITVYHDFPDRTLIAADFSIWFASFVDIRTT
>NZ_CP019510.1|WP_077403243.1|2879848_2881513_-|ECF-transporter-S-component
METRLSDLREQRLQKLFSDCRQQVIAQVIGPFGLSTAMFEDRNGGNVTTLRNFKREDDSYVATDSDKALHAHSKKDYSVEIREGYEVDTKKKAVEADSTTWQEKRAAKIKVGKDEYTGRAVSEQGTITLKDGKIVRAELDHVVSIKEVHDDPKIHLSLGKTNKDSTGKITVDVSRVRATVNHDDNLALTNQPLNGSKSDNDLLDWGSEKRKDDSTNCDKFDADAKLLNEKHEKAKARIDETADQSLNRKQAEELLTTGTKQAALMAMRQALGLLLTELVNGLFNEIKVLIAHGIEAGKTLFDEIRERMDRIMSSVVKKIPDAVSLMFQGGISGFISNLLTFILNNFLSTAKRLVAVIREGLLGLFHAFKMIFFTPQHMTADQGLQEGLKILGTVIISTIGILLNESVSAFMATVPFLKPLADMITPVLIGIMSGLLSAFLAYQIDCLFDRYRHSLDEKFINELMEDAKRSDEFANNLTALSKSSISNVERYSKSISLYQDIGVAFGAAATAATGAFVSLEQATLTTREQAKKSVAMVAFMCESQAEIDDFLATF
>NZ_CP019510.1|WP_077403269.1|2892646_2893594_+|cupin-like-domain-containing-protein
MPVEKKVPLPLAATPISPRALPPRPPAQFSSPEAALARKQAREGKDAQVRGVTSIDAMRGAIKQAARDLPSITEVPRLAMLDAAAFRARAALGLPFLMRGLVQRWPLSAMGPEVLREQYSHVPVRARVGDYINTAFAADRAMQDMSMGQYLDLVAEGRHALPPYLGNLELRELNRLCHWPAYFDKMGPPRFWVGPAGTVTPLHCDYDDNIFAQVWGRKRIFLSPPHHDEFLYPSEANAILFGSPFDPEAPDFERFPLARQATMIECLVEPGDMLYVPAGWYHQVRALTFSLSSNRWARAVPLALHGEMALRRTEA
>NZ_CP019510.1|WP_150131115.1|2893705_2894614_+|ADP-ribosylglycohydrolase-family-protein
MTSSLNNRYLGAMLALACGDAVGTAVEFAPRGSFAPVTDMTGGGPFGLQPGQWTDDTSMALCLAESLVLKGVFDPADQMVRYLNWWQWGYLSSTGTCFDIGGTVRGALASFQETDNPYSGSTAPMTAGNGSLMRLAPVVLFAYPDVVAVVAYAADSSRTTHAAPEAIESCQLFAALLCSALAGTPKEALMDSVAYRPVEPKLVELASGNFIAKTEGQIRGTGYCVESLEAALWCFFNTDSLEEAVLRAVNLGEDADTTGAIVGQLAGAYYGAQAIPARWLEVLAMRGDIEELAGKLFERARG
>NZ_CP019510.1|WP_077403275.1|2894610_2895342_-|class-I-SAM-dependent-methyltransferase
MTQNIYDNDAFFTAYSQLPRSVGGLDSAPEWPALRALLPDLQGKSVLDLGCGYGWFCRWAAEAGAARVLGVDVSEKMLAQARAMGEHAAVSYARLDLEQLALPPASYDLIYSSLAFHYIEGFATLLAAIRQGLQPGGKLVFSIEHPIFMAPRQPGWLTDAQGRKRWPVDSYQEQGPRVSDWLAPGVIKQHRTLGTTLNALLHAGFELEHVEEWGPGDEQVAQQPSLAEERERPMLLLVGCSLR
>NZ_CP019510.1|WP_077403278.1|2895338_2896592_-|voltage-gated-chloride-channel-family-protein
MQRLSALTDLLKHLFKWLLLASVVAALAGSASAAFLFALDWATRTRLAHAWLIWLLPVAGFAVGWLYLRYGSSVEGGANLLIDEIHDPKKIIPLRMAPLVLGGTVVSHLFGASVGREGTAVQMGGALADQLTRMFRLNNEDRRIILMAGISAGFASVFGTPLAGALFGLEVLAIGRLRYEAMLPCLLAAVIADQVVLLWGPLLHIAHTHYAVPLIPAISAWTLSAIVIAGVLFGVTGNVFAQATHGLSALMKRKIAYAPLRPLIGGLVVALAVWLLGTDKYIGLGIPTIVDALKQPLPAWDFLGKIALTIVSLGTGFKGGEVTPLFFIGATLGNALGPLLHQPVTLLAAIGFVAVFAGAANTPIASTLMAMELFGAEIGVYAAIACVVAYLFSGHAGIYRAQRSGHAKRHPAKDLDT
>NZ_CP019510.1|WP_077403281.1|2896627_2898217_-|glutamate-decarboxylase
MTDTPVEQLLQQHFSIDALQQAPAPLRQALGMLGGWLAAERDAAYPHTPYAELLTQLSGTSLPAHGMPVADFLQELDTTVLANTAQLNHPQYIGHMTQALPWISVLAEAFTATLNQNQVKIETAYVSTLIEKQILGWLHRQVYQQPEHVYTQAMAATSGALGNVVNGGTMGNLTALAVALEQQLPGTRKRGLFAAMQESGWAGLAVIGSARSHYSVKKALATLGLGENALHLVAVDRDNRIDVQALEATIADLKLRNIKVVAMIGIAGTTETGAIDPLAAMAAIAARESIWFHVDAAWGGALLIAEQYRPLYDGIALADSVVIDGHKLLWVPMAQSMVLFKDSASLNLLKHNANYILRDNSGDLGQTSLEGSRRFDALKLWTSFKVLGVSGYTTLLQQAATLSGQLQDLLADQQDFELVTRSDTFILTYRYVPAHLRQRMESLLAGGQVEAATELNKQLNTLNAKLQNRQKAQGHSFVSRTVLESTRYPGPTNVLRVIMTNVKTRPNHLRAILAEQRAIGQTLVTELGL
>NZ_CP019510.1|WP_077409086.1|2898346_2899351_-|tryptophan--tRNA-ligase
MASQSVILTGDRPTGPLHLGHYVGSLRDRVAYQNSYKQFIMLADAQALTDNMDDIDKVHRNVVEVALDYLAVGIDPTKTTVFIQSQIPELAELTFYYLNIVTVARLERNPTVKEEIRLRGFERDIPAGFLTYPASQAADITAFKAGVVPVGEDQIPMIEQTNEIVRRFNRMYNREVLMECKALVPDIGRLPGIDGKAKMSKSLGNTINLGATPAEITAAVKKVYTDPLHLRVEDPGHLEGNIAFTYLDAFDPEKAALAEMKAHYVRGGLGDSIVKKRLDLVLQEMLAPIRARREEFAKDKGQVIQMLKEGTFKAREVAARTADEVKSALGLNYF
>NZ_CP019510.1|WP_077403284.1|2899743_2901705_+|CocE/NonD-family-hydrolase
MRVSSPVRLTGLALLVSTLFSAPLLAQTPQTPQTPPMTPDIGAKLVMPDMNDYVKRVVMIPMRDGVKLYTVIVVPKGAQKAPIMLTRTPYNAARRAQRAASPSMLAALPQGDDTLVENGYIRVFQDVRGKHGSEGDYVMTRPVRGPLNHTKVDNVTDAWDTIDWLVKNVPETNGKVGMLGSSYEGHTVLMALVDPHPALKVAIPMSAMVDGWRGDDWFHNGAFRMPSLSYLAWQTSARGSSEAPALGVYDEYDAYLRIGSAGDYAKKFGIDKLTYTKKLFEHPAYDSYWQEQALDKILAKRPLIVPTMHVVGQWDQEDIYGPYATYTAMEGRDKRNNLNYLAIGPWRHSGVNYDGSSLGALKFDGDTARQFREKVMQPFLNQYLKDGAPDANTAPVVSYQTGTNQWQRLQQWPLACETCDTKLTPIYLQDGSRLGFAVPSGAADAAEGAFDEYVADPAKPVPFVARPVRLMDPDVWKPWLVSDQRGYADRTDVLSYVSEPLKTAVRIAGAPMVNLFAATSGTDADWVVKLIDVYPDEVPSQPAMGGYQLGVAMDIFRGRYRDSFEHPTPIPAGKVERYRFALPNANHVFLPGHRIAVQVQSSWFPLYDRNPQNYVPNIFLADPGHYRKATQRVYHAAGAASAIELPIAPLDAR
>NZ_CP019510.1|WP_077403287.1|2901701_2902559_-|EamA-family-transporter
MSGLVVAVVLFAALLHASWNAIVKSGKDTFLSTVLVSVGAALISLAVLPFVNTPAPASWPYLAASAVAQLAYYSLLAAAYKAGDMSHAYPLMRGSAPLLVALASWPLIGERLSSMQMGAVACISAGIFGLYFAARLPAAAGAATNTGRATAFALGNACVIASYTLIDGIGVRLSGAPAAYTMWIFVLNGAGLLLWTALLRPADLLAYAQTQWRLAALGGFGTLASYGLALWAMTQAPVAAIAALRETSILFAIAIAALFLREKISPRRYLAIGLIAAGAVLMRIA
>NZ_CP019510.1|WP_077403290.1|2902566_2903388_-|transporter-substrate-binding-domain-containing-protein
MTDFYSSAWRRTVAMLALALPSLAGAQCSRDIQVPVSAIGASVVVNGATISGIYPDLLRGMGAKLGCNFIFTAVPRARLEAMFETGKADLLIPASSTLRRDQHGLFIPMLGSRPLLISLQGARPPINTMQELIERRELRVALVRGYDYGAPYQALAKELSSQGRLFYEVDALSVARLMQSGFIDATIMSPTILAGVAQNDARVYGLADRLRLEALPELPWGMSGVYLSRKSLTAEDQATLRELLDRAGRSGSVMEGFQRHHRQELLSLSIRPR
>NZ_CP019510.1|WP_077403293.1|2903488_2904769_-|TCR/Tet-family-MFS-transporter
MSDKTSPDSHPPSSPAPKSAGNLNFILVCVFIDMLGIGLVVPVLPILIGDFVNGKDEQAFWYGIMAAVFGLLQFIFMPMLGAISDRVGRRPVLLYSMAGMGINFLATGWAPNLACLFIGRIIGGVSSASMSVASAYASDVSTHDNRAKSFGKIGAAFGLGFICGPMLGGLLGEINLHLPFYVAAGLSAANFLYGYFCVPESLQPGPRAPFTLARINPFAALLKLVRRVEIRGLVLAFGLMTFAQMMLNTTWVLYTHFRFDWTPRQNGIALFCVGLCAAVVQAGLLGILIKRFGEVRLSLLGMASGALTYLLYGLATQGWMMYALILCNLLAFAAGPALQGIISKSSNASEQGELMGSLQSISSLGIIFMPLLGSMILGEVSHLPPQDWRIGSTFYLCAIMQTLGILVAWRYFKVQRQARLVVSTTK

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	503743 : 512732	8	Acidithiobacillus_phage(57.14%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP019510|503743:512732|DBSCAN-SWA
AATGGACAGAGTTGTGGCACACGTTCGGATAAAAAAAGCGGCAGAAATGTTAGGCGTTACGGCACAAACAGTGCGGAATTGGGTGGCCGCGGGCCGCCTCCCGTCAGTACGGCATCCGATCAACGGCTACCGTCAATTTCGAATAGAAGACATTGAGAAAGTCTTAGCGCTGTCGGATGGAGGCATGACTTGTGAATCTGTCGCGCTCAATGCCACGGAGGTATGCCATGAAGTGGCATCTCAAGGTCCAATTTCGTATTCGTTGAAGGATGGTTTGGGCGTTCGAACAATTCGACTTAGTGATGGCCGCACAGTCTCGACCTCGCTCCCCTCTAACTGGAAGTCTGGAAGCTATGGGGCGGCCGAATATGAGTACGATTGGCTGCGCCTAAAGGTCGCCCCGAAAGCGCCAGAGCTTGGACGGCGAGTCCGAGTAGGCGACGCATTCTGTGGCGGCGGAATATTCTCGTTGGGCGTTGACGAGGCGTTGCGCAGCGTCGGCATGACCCCGGTACATGCATTTGGCCTGGATTTTAACGCGGATGCAATTCGGACCTTCAAGCATAACTTTCCAGGGTCAGTCGCCATGCAGGATGATGTCACAAGTGTGATTAATGGCGAGGTTGGGAAGGCAGAGACGATTGAGGAGTTGCGCTTCCTGGAGGCCGTCGGCGGCAGTGTCGATGTTCTGTTGGCCGGCCCCCCGTGCCAAGGTCACAGCGATCTGAACAACCACACCCGAAGGCAGGATCCGAAAAATAGTCTTTATTTTTCGGTCGTGCGACTTGCCGAATTGCTTCAGCCGGCATTTGTCCTGGTAGAAAATGTTCCGGGTGTCGTTCATGACCAAGGGGCAGTTGTGAACCGGACGAAAGAGGGGTTGGAGGCGCTCGGGTATCATGTTTCGTCGTCACTCGTAGAGCTGATTCACATTGGCGTGCCGCAGAAGCGGAAGCGCTACTTAATGGTCGCTTCGAAAAAAGGTGCGGTTGATATCGCTGGCGCCATCGCAGCTAATTCTTGCGATGTTCGACCCGTGTCTTGGGCGATTGGCGATCTAGACGATGACTACGATGAGTCGGTGATTTATCGGTCTTCCTCAAATCACTCCGCAGAAAATTGTCGGCGCATTTCGTATCTGTTTGAGCACGATTTGTATGAACTGCCGAATAAGGAGCGACCGCCTTGTCACCGCGACAAAGCGCATAGCTATGTTTCCGTCTACGGCCGCATGTGGTGGGATAAGCCGGCCCCGACAATTACAGGTGGTTTCGGTTCAACCGGTCAAGGGCGGTTTGTTCATCCATTGTTCAAGCGCACATTGACTCCTCACGAGGCGTTTCGTCTTCAGTTTGGCCCAGATTTTTTCCATTTTTCAGAAGATACCGGACGACGTGCAATGCAACAGATTATTGGTAATGCCGCTCCTCCGAAGCTCAGTCAAACAATCGTCATCGGTGCGGCAATTCAGGGAGTTTTGCTTTGAAAGTAATGGGCTTATTTAGTGGTATCGGCGGTTTTGAGCTTGCGTTTGCCCGACATGGGGCCGAATGTGTTGGCCTCTGCGAAATCGATGAGGTTGCACGTGCAGTTCTCACGGCGCGTTTTCCAGATGTGCCCCTTTATGGTGACGTAGAAGCGATTGAGTCGTTGAATGACGCGGACGTTGTGACAGCGGGATTTCCATGCCAGGATCTGAGTCAAGCCGGCGGGAGAACGGGCATAAAAGGCTCACGTTCGGTCCTGATTGACCATGTCTTTCGTCTGATAGCGGCAGCAGAAAAGAAGCCCGAATGGGTAGTGCTGGAGAACGTCTCCTACATGCTAAAACTTAAGGGCGGAAACGCCATGCTCCACATTATCGAACAGGCCGAAGCTCTCGGTTATAACTGGGCATACAGAGTCCTAGATGCCAGATGTTTTGGCTTGCCTCAACGGCGCGAGCGGGTAGTGATTCTGCTCTCGCGTACTCAGGATGCATCGCAAGTGCTATTCCCAGCCGGTCGGGTCGAACCTAATGTGGATGATCACGTGGGACTCGTAAGTCCGCAGAGCGTATATGGCTTCTATTGGACCGAGGGGAAGCGCGGCTTGGGGTGGGTGAAGGACGCCGTTCCTACCATTAAAGGCGGCTCCGCACTTGGCATCCCGTCGCCACCGGCGATTTGGAACCCGGCAACCGGCGAATTTGGAACGCCTTCGATCGCTGACGCGGAGCGAATGTTCGGCTTTACCCCTGGCTGGACGGAACCGGCATCAGCCAGTTCAAGCAAGGCAGGCGCCCGTTGGAAGCTCGTCGGCAACACAATATGCGTCCCAATGGTCGAGTGGGTTTGCAAGCAGATCATGGCTCCACGAGGCTTGGAGGCCTTGACAGATGCTCTCGCAGAAACCGCGCGGTTGCCGCTCGTTGCCGCGTACGGCATAGCCGGGCGCCGATATGCCGTGAACGTGTCTAAGTGGGCTATAACAGCACCACCTCCACAGTTAGGACAATTTCTCGTTGATTCGTTAAAGCCCTTATCAGTACGTGCAGCGTCAGGTTTCTACAGCCGAGCGCTTGAAAGTACTACAATTCGGTTCGCGGACGGTTTTCTTACCAGTTTGGCATCGTATATAGAGCGCTCTAAATTGGCTTCGTCGTTGAGCTAACCGAAGGATAGGTATGTCAGAAGAGGTAGTGCAATCTGAAAGTGCTGAGATGCAACGCGACGCCTTTTGGGCGGCGGCGAACGGTTATGCAGAACCGAGTAGCGGCGGGGATTCGAAAGCATCATTGCTGCAGGTCGTTAAGACGCTTGGCGGTCTACCGTCGTCGGCCCATGTCTATGTGGCTAAGCTAACCGCTGCCGGCTTTAACAATCAAATCTGGCAAGGCAAGAGCATTTCACAAGACAACGAAATTCTTGTCTTTATAGACCAGACTTCGAATCCAAATCTTGTTCATCAGGCCGTTCGGAGCCGGCTTAACCCCAGAATTGACAGCGGCTTCGAATGCATTGTTATTGGTGAATCCAGAGCCGAAGACGACTGGGACGTGCATTCTGTAGTCGAATTCGATCATTCCCAGATTGGCGCAAATCTTAGCGCCATACTAGGATCTGCACTCAACGTTGAGCAGGTGCCCGACCCGGCTGTGGCGGCCGCATCGTTGGCGGCTGCCGCGCAGGCGGTCGCTGAACCGTTACCGCCGCCAATAGCGGAAAGTGACCTCACTGCTGCCGAGGTTGTCGAACACCTGTACGAAGCCAAAAACGTCGTCTTGGAGGGCCCACCAGGCACTGGAAAGACTCGGCTTGCGCAGCAAGTCGCGGACGTCCTCGGCGGAGGTGACGCGACACCTTTTCGCCTTGAGACCTTACTCGATGGGTGCGGAGTTGGCGACCGAATCGAGGAGCTACGTGCAGCGCCGGTTGTATGGGAAATTATTCAACTACATCCAGGTTTCGGATATGACGAATTTGTACGGGGGCTCCGTACTAACCCCGAAGCGGAAGGCTTCGACCTTCAGACTGTTGACGGAATCCTTCCGCAAATGGCGCAAGTTGCTTCGTTGCGGAAGGGCAAACCCACGTTGTTGATTATCGACGAGATAAATCGAGGGAATCTGTCAGCAATTTTGGGCGAGACGATATTTGCGATCGACCCCGCTCACCGCGGGCGGGAGGTGCGACTGCAATATGAGGCGCCCCCCGGCGGCAAGGACACGCTCAGTGTGCCGGAGAATCTGTACCTGCTCGCGACTATGAATTCAGCTGACCGTTCGATAGCTATGCTCGATTTTGCAGTGCGGAGGCGGTTTCGCTTCCTCAGACTGCCGCCCTCAGTCAACGCGTTAGCTGCCTTTTACTCGGCAAGTGCGCACCGGGCGCAGCGAGTTAGTTTGCTCTTTCAACTGTTCACAGCCGCAGTCGCTGATCGCGATTTGCAGCCTGGGCACTCGTACTTCATTGTTCGGAATCATAGTGCGCTCACAGACGATGAGTGGGCTCAACAAATAACCGCAAGAGTTGTCCACGATATTAGACCGCTTTTCGATGAGTACCGCGAAGAGGGAATGCAGATTATGCAATCTAGGCTCACGATTGGCGAAGAAGCAATCGACCTGTTAGCGGCGCCGGCGGAAGCGGTCCGAACCGCAATGCTGACTTGGCTTAAACCTTTTACGGAGTCCCAATGAGGAAGGACGAGCTTCAGGAGGCGGTAGCGCGAGCGGCGGGCGTACCGATGAATAAGGTGACAACGAAGCAGCGTCCTGGCACGCAAATCAAGGCAAATGCATTGTGGGAAGGCAGCTGTACGCCGGCCGCGGCCCGTACAGCGGCCGGACTGTTTCTTGCGGAGGACGCGCCAGACTTAGCGTTTGAAGGAGCCATCCGGCGCATGACGCTGCCTCCACCGTTTCCGAATACAATTATTGTTCTTTCCGAGATGGGGTCTGAACTGCCAGGCGTGAAAGTTTTCGGCTACCCCGATAGCTCTTCAGCAAAGTTACTTGCAGCGGCACTAGAGGTGCCGGTCGAATCCGTGCCCAGGCCATTGGTTACGCAAGTCTCTCGGCGACCGACTGAAGCATTTGACATAGACATGCTCTTGTCGAACCTCAGGGAAACGCCAAACATCGTGTTGCAGGGGCCGCCTGGGACCGGCAAGTCAAGCTTGGTCTTGGCGCTAATCCGTTCATTGGCGGAGACCGAGGCTATGACTGCCGAAGAGTGCCGTTTCGGCCGCCTGGTGGCGGAATCCGGCGGTGATGTCGACAGCTTTTTGAAGGATGCGAGCGCCTGCCAGGTGCCCCCTGTCATCTGGGAGTTCGTGCAATTACACCCAGGCTATGCTTATGACGATCTAGTGCGCAAGGTAGTACCACGGACTAAAGATGGGGTAATGCATCTGAGGACCGAAGATAGTTTGCTACCGCGCCTTTGCAAGCTTGCTGAGATGCGTCCCGATAAACCGGTCATTTTAGTTCTTGACGAAATTAATCGGGGGAATCTTGCGGCAATCCTGGGCGAGTTCGTATTCGCCATTGACCCCGGGCACCGCGGTGCGAAAGTACGGCTGCAATATCAAGGCTTGGGCCTTGCGCCGGCGGTTTCTGTTCCTGAGAATCTTTGGATTGTCGGCACGATGAATACCGCCGACCGCTCGATCGCCATGGTTGACTATGCAGTACGGCGCAGGTTCCGTTTTTTGGAAGTACCGGCGAGCCCCACTATTGTTGACCAGTATTATGGTTCGGACTCTGCGGAGGCGACCGTCGCTCGGAAACTGTTTGACGAATGTAATCTTGGCTTGCCCTCCCGCCTCCAAATCGGCCATGCGGCGTTTCTGGAAGACGCTGAGCCCTCTGTGAGTTGGCCGGCCCGAATGGCGCGTAAAGTGGTCTATAACGTGTTCCCGTTACTTTCTGAGTACGTTAAGGAAGGGTTGCGCGACGTCGGTCCGGTTTCTTTTAACGACGAGAAATACGCCCTCGACGGCCAACGCGCAGCAGCGCTAGCTTTGACTTCGTCGATTCGGGGAATGCTCGCGAGCCCTCAATGATCAGCTTTGCTGCAGAAATATTAGTACAAATAGGGCTTGTTGTTTCCGATTCAGCTCCACAATTTGTCTTGGAGTTCAGTGAGCACGAAAGTAGAACGTGCGTGTTGCCTAAGCAGGGCGGCGATACCGTTTTTGAGGACATCCTTGACCTCCTAGGTGATGTGATCCGAAGCGGAATGTTGGCGGTTGAGGCTCAGCGGAACAAAGGCGGTGCAACTCTTCTCGTTGTGCAGTCCTCAAGTATTGTCGGCTTCGCGACGTCGTCGAGCACTGCTGGTGAAAGGGTGTTCGTGCGGGTTCACCCCAAAGTAGGTACAGGACGCATGCTAGAGTTAGCTGTGCTTGCTGAAATGCTTCCAAATTGGAAACTAGGCGGTGCCGATATATCTCCATCAATCGAAGAGGCGCTTTTAGAATGGACTCTTGGCGCATTCGATGAGGGTTTGCGGCGCCTGCTCTTGAAAGGGGGACTTCGCAACACGCATGAACGTATTCGGGCAGAGCTGAAAAACCGCGTGCGCGGACGCTTGCTTCCAGGACCTTGGTTACGTAATGTTGCTAAAGGAAAGCCAAACGTCCTTCCCGCAGAGTTCCCATCGTTAGAGTTTGACAACCCTGCCAATCGGCTCTTGCGATGGGCTATTCATGTTGGAATCGTTGTAGCGCAATCAATGCCCCGGACTAAGGGAATTGCTGAACGGCTGCGGCAAAAGGACCGGCAGTTCGCAGGCGTAATGCTAGCCAAGCCCCGGGCGCCGCTGCTGAACATGAACGGTTTACCTACGAATCTGCGCCACTACGCAGAGAGTTTGTCACTTGCTCGTCAAGTCATCGACAGCGTTCGCTTGGGAATACGACCGGGCGAAGTCGAGGCAATGTCAATTGCGATAGATATGAACGATGTCTACGAGCGCGCATTTTTCAATGGGTTAATGACTCACCAGCCCCAAGCAAGCCGCCACGAGACTTGGAAAATACATTATTCCGCAGCTGTTCCGGTAGAAGAGGGCAAGCATGCTCGTTCAACCGAGATGATTCCGGACGTTTGGATCCAAGGCACACAAGGGCGTTTGCCAATTGTCGTGGACACAAAGTGGAAGAACTTGCTATTTAAACGAGGTCCGGTCGACCTGGGAGACTTGTTGAGCGCGGAAGAGACTAAAACCATCAAGCTACGCCCCGAAGACCTGTACCAGGCGACGGCTTACGCGGTTGAGGCACTGCAGCGCCGACTTGCGGATGGGCACCTGTGTGACGGATGCGTCGCAGCGCTTGTGTACCCGATCACTAGACCAATACCGGACTATGGTCGCGAGATTCAACTTGGGCCGTTCCGGATAATTATCCGAATTGTAGCTTGGAATGTAACCGCGCCACCTTTGGTGGAAATTGGGAAAATCTGGGAGCGCTTGAACATCCTGGCAACAGGTGTGTCGCTTGGAACGCGGTCGACCGATGGCTAGGTTCTAGGCTGAGAGGACCGAATTGAGCGCACCATTCTTTTACTTGAAGGCATAGAAATGGTCGATATTTACGGCAAAGCCAAGCGCAGCAACTTGATGTCGCGTGTAGCTACACGGAACACAGGTCCGGAGATGGTGGTTCGCAGGATTGTGTTTTCGCTAGGGTACAGGTATCGCCTCCATGTGAAAAATCTCCCTAGTAGCCCGGATATAGTATTACCTCGGCACCGGAAGGTCATCTTGGTCCACGGTTGCTTTTGGCATCGACATTGCTGCAGGGCTGGAAGGCCGCCGTCCTCAAACACTGAATTTTGGTTGCCTAAGCTCCAGAAGAACGTTGAGCGGGATCAGCGAAACGTCGTAGCTCTACAGGGGCTTGGATGGCAGTGCCTCATTATTTGGCAGTGCGAGCTTAAGCAGCCAGATGCCGTTGCGTTGAGAATCAAGAGTTTCCTTGCTCCAGAGGGCAGCGAGCGTTAGCAAAAATAAGGAAGAACTTGGGTCAAATTGGGGAAAATTTCCTGGGAATTACTTCCTTCTATCGCTCTTTGTTGCTAGTTGCTGCCCGTTCGTTTAAGCTGTAGTTTCAAGGAGTTGCAGCTGTCACGGGGGCGAGTGGAGGAAACCATGTTGGCCTCCGAAGCCAAGGGTCGTGGGTTCGATCCCCGCCAGCCGCACCAAGATGTCCCGGTCGTTTCCTCCATTTTTCCCCCTCTGTTCGCAGTTGATGGGTCGCGCTGTGCTGTTCGCCTTGCCGTTCTGGCGTCGTGTCGTGCTTGTCCCTGCACAAATTGTTATACTATTTTGGTTGCGTTTATTGCGTTTGACTCGTAAGCTTGAACGAGAAGTAGGGAGGAATACCATGTCGAATGTAATCGATCGTCTGGACAATAAAGAAGACCTGGAACTGGCGAAAGCGGCGCAGCGTTGCCTGGTCAGTGCGCTCGATCATTCGCGTGCCGTGCAGATTGCCGTTCTGGAAGAGGGTGCGCAGGACCTGGGCGACGCCCCCTTGCTGCGCTTGCCGCCGAATGTATTGCGCCTGTTTGCCGATGTGCTGGGCACCTTGGCGCAAGGGAAGGCCGTGACGGTCATGCCCAAGGAGCTCGATGTAACGACCCAGGAAGCGGCGATGTATTTGAATATGTCACGGCCGTATCTGGTGCGCTTGTTTGAAGCGGGGAAAATTCCCTATCATAAGGTGGGTACGCACCGCCGGCTGCGCTTTGAGGATGTGGTGCAGTACAAGGATGAGCGCAAACGGCGTTCGGAACAGGCCTTGCAAGCCTTGGCAGATCAGGCGCAGGAGCTTGAACAGGGGTATTGATGGCCGGATACTACCGTTACACTGCCGTTCTCGATGCCTGTGTGTTATATCCTGCACCCTTGCGCGATCTATTGCTGAGTTTGGCGGCGGACGGTATCTTCAGCGCGCGCTGGACAGCGCAGATACAGGAGGAGTGGCAACGCAACTTGCTGCTCAAGCGACCTGATCTCGACCCTTCGGCGTTGGTGCGCACCAGCGCGCTGATGGCCGAGGCAGTGGAGGATGGCGTGATCGATTCTTACGAATACCTGATCGATACCTTGATCTTGCCCGATCCGGACGACCGGCACGTTCTGGCGGCTGCTATCGTGGGACATGCTGATGCCATCGTCACGTTCAATCTCAAGGATTTCCCGGACGCACTCATGCGCGGGCACAACATTGAAGTCTTGCACCCGGATGATTTTCTGGTGGCCCAGTATGAATTGGCCCCGATACGCATGCTCAGCGTCGTCAAGGAAAACCGGGCACGATTGCGCAAACCGCCCAGATCCTCAGCCGAATTGATTGCCACCTACGAAGCGCAAGGCTTGCCGCAACTGGGCAAGTTGCTGCGTTCCGCGATTGCTTTGCTCTGGCGTCTGCTTCAGCAACCCGGCAATAGCCGTTCCACCGCTCTTCCTCCCTTGAAATACCTGCCTCCGTTTTTCTGA

Protein sequences of DBSCAN-SWA_1

>NZ_CP019510|503743:512732|509285_510752_+|WP_077398560.1|DBSCAN-SWA
MISFAAEILVQIGLVVSDSAPQFVLEFSEHESRTCVLPKQGGDTVFEDILDLLGDVIRSGMLAVEAQRNKGGATLLVVQSSSIVGFATSSSTAGERVFVRVHPKVGTGRMLELAVLAEMLPNWKLGGADISPSIEEALLEWTLGAFDEGLRRLLLKGGLRNTHERIRAELKNRVRGRLLPGPWLRNVAKGKPNVLPAEFPSLEFDNPANRLLRWAIHVGIVVAQSMPRTKGIAERLRQKDRQFAGVMLAKPRAPLLNMNGLPTNLRHYAESLSLARQVIDSVRLGIRPGEVEAMSIAIDMNDVYERAFFNGLMTHQPQASRHETWKIHYSAAVPVEEGKHARSTEMIPDVWIQGTQGRLPIVVDTKWKNLLFKRGPVDLGDLLSAEETKTIKLRPEDLYQATAYAVEALQRRLADGHLCDGCVAALVYPITRPIPDYGREIQLGPFRIIIRIVAWNVTAPPLVEIGKIWERLNILATGVSLGTRSTDG
>NZ_CP019510|503743:512732|503743_505228_+|WP_171984921.1|DBSCAN-SWA
MDRVVAHVRIKKAAEMLGVTAQTVRNWVAAGRLPSVRHPINGYRQFRIEDIEKVLALSDGGMTCESVALNATEVCHEVASQGPISYSLKDGLGVRTIRLSDGRTVSTSLPSNWKSGSYGAAEYEYDWLRLKVAPKAPELGRRVRVGDAFCGGGIFSLGVDEALRSVGMTPVHAFGLDFNADAIRTFKHNFPGSVAMQDDVTSVINGEVGKAETIEELRFLEAVGGSVDVLLAGPPCQGHSDLNNHTRRQDPKNSLYFSVVRLAELLQPAFVLVENVPGVVHDQGAVVNRTKEGLEALGYHVSSSLVELIHIGVPQKRKRYLMVASKKGAVDIAGAIAANSCDVRPVSWAIGDLDDDYDESVIYRSSSNHSAENCRRISYLFEHDLYELPNKERPPCHRDKAHSYVSVYGRMWWDKPAPTITGGFGSTGQGRFVHPLFKRTLTPHEAFRLQFGPDFFHFSEDTGRRAMQQIIGNAAPPKLSQTIVIGAAIQGVLL
>NZ_CP019510|503743:512732|512078_512732_+|WP_077398566.1|DBSCAN-SWA
MAGYYRYTAVLDACVLYPAPLRDLLLSLAADGIFSARWTAQIQEEWQRNLLLKRPDLDPSALVRTSALMAEAVEDGVIDSYEYLIDTLILPDPDDRHVLAAAIVGHADAIVTFNLKDFPDALMRGHNIEVLHPDDFLVAQYELAPIRMLSVVKENRARLRKPPRSSAELIATYEAQGLPQLGKLLRSAIALLWRLLQQPGNSRSTALPPLKYLPPFF
>NZ_CP019510|503743:512732|505233_506394_+|WP_077398554.1|DBSCAN-SWA
MGLFSGIGGFELAFARHGAECVGLCEIDEVARAVLTARFPDVPLYGDVEAIESLNDADVVTAGFPCQDLSQAGGRTGIKGSRSVLIDHVFRLIAAAEKKPEWVVLENVSYMLKLKGGNAMLHIIEQAEALGYNWAYRVLDARCFGLPQRRERVVILLSRTQDASQVLFPAGRVEPNVDDHVGLVSPQSVYGFYWTEGKRGLGWVKDAVPTIKGGSALGIPSPPAIWNPATGEFGTPSIADAERMFGFTPGWTEPASASSSKAGARWKLVGNTICVPMVEWVCKQIMAPRGLEALTDALAETARLPLVAAYGIAGRRYAVNVSKWAITAPPPQLGQFLVDSLKPLSVRAASGFYSRALESTTIRFADGFLTSLASYIERSKLASSLS
>NZ_CP019510|503743:512732|507969_509289_+|WP_171984923.1|DBSCAN-SWA
MNKVTTKQRPGTQIKANALWEGSCTPAAARTAAGLFLAEDAPDLAFEGAIRRMTLPPPFPNTIIVLSEMGSELPGVKVFGYPDSSSAKLLAAALEVPVESVPRPLVTQVSRRPTEAFDIDMLLSNLRETPNIVLQGPPGTGKSSLVLALIRSLAETEAMTAEECRFGRLVAESGGDVDSFLKDASACQVPPVIWEFVQLHPGYAYDDLVRKVVPRTKDGVMHLRTEDSLLPRLCKLAEMRPDKPVILVLDEINRGNLAAILGEFVFAIDPGHRGAKVRLQYQGLGLAPAVSVPENLWIVGTMNTADRSIAMVDYAVRRRFRFLEVPASPTIVDQYYGSDSAEATVARKLFDECNLGLPSRLQIGHAAFLEDAEPSVSWPARMARKVVYNVFPLLSEYVKEGLRDVGPVSFNDEKYALDGQRAAALALTSSIRGMLASPQ
>NZ_CP019510|503743:512732|510809_511232_+|WP_077398562.1|DBSCAN-SWA
MVDIYGKAKRSNLMSRVATRNTGPEMVVRRIVFSLGYRYRLHVKNLPSSPDIVLPRHRKVILVHGCFWHRHCCRAGRPPSSNTEFWLPKLQKNVERDQRNVVALQGLGWQCLIIWQCELKQPDAVALRIKSFLAPEGSER
>NZ_CP019510|503743:512732|506443_507922_+|WP_171984922.1|DBSCAN-SWA
MQRDAFWAAANGYAEPSSGGDSKASLLQVVKTLGGLPSSAHVYVAKLTAAGFNNQIWQGKSISQDNEILVFIDQTSNPNLVHQAVRSRLNPRIDSGFECIVIGESRAEDDWDVHSVVEFDHSQIGANLSAILGSALNVEQVPDPAVAAASLAAAAQAVAEPLPPPIAESDLTAAEVVEHLYEAKNVVLEGPPGTGKTRLAQQVADVLGGGDATPFRLETLLDGCGVGDRIEELRAAPVVWEIIQLHPGFGYDEFVRGLRTNPEAEGFDLQTVDGILPQMAQVASLRKGKPTLLIIDEINRGNLSAILGETIFAIDPAHRGREVRLQYEAPPGGKDTLSVPENLYLLATMNSADRSIAMLDFAVRRRFRFLRLPPSVNALAAFYSASAHRAQRVSLLFQLFTAAVADRDLQPGHSYFIVRNHSALTDDEWAQQITARVVHDIRPLFDEYREEGMQIMQSRLTIGEEAIDLLAAPAEAVRTAMLTWLKPFTESQ
>NZ_CP019510|503743:512732|511614_512079_+|WP_150131078.1|DBSCAN-SWA
MSNVIDRLDNKEDLELAKAAQRCLVSALDHSRAVQIAVLEEGAQDLGDAPLLRLPPNVLRLFADVLGTLAQGKAVTVMPKELDVTTQEAAMYLNMSRPYLVRLFEAGKIPYHKVGTHRRLRFEDVVQYKDERKRRSEQALQALADQAQELEQGY

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171984921.1|503743_505228_+	DNA (cytosine-5-)-methyltransferase	A0A0R6PG08	Moraxella_phage	2.3e-27	31.1
WP_077398554.1|505233_506394_+	DNA (cytosine-5-)-methyltransferase	A0A1P8DJM9	Virus_Rctr41k	1.7e-33	40.5
WP_171984922.1|506443_507922_+	AAA family ATPase	K4I1H4	Acidithiobacillus_phage	5.0e-22	30.6
WP_171984923.1|507969_509289_+	AAA family ATPase	K4I1H4	Acidithiobacillus_phage	9.6e-25	29.0
WP_077398560.1|509285_510752_+	hypothetical protein	NA	NA	NA	NA
WP_077398562.1|510809_511232_+	DNA mismatch endonuclease Vsr	I6NSG0	Burkholderia_phage	1.1e-30	45.6
WP_150131078.1|511614_512079_+	helix-turn-helix domain-containing protein	K4ICM4	Acidithiobacillus_phage	1.1e-23	45.6
WP_077398566.1|512078_512732_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	1.9e-42	48.9