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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011752 Bordetella pertussis strain J016 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011752
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011752_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011752_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011752_3 996350-996444 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011752_4 1892762-1892889 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011752_5 3428273-3428382 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233335 : 286923 47 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590419 : 651609 56 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 656933 : 703124 51 uncultured_Caudovirales_phage(18.18%) terminase,transposase,tail,tRNA NA
DBSCAN-SWA_8 709290 : 763220 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 885809 : 953785 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 997314 : 1069816 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1073569 : 1134596 52 Catovirus(20.0%) transposase,tRNA,holin NA
DBSCAN-SWA_12 1152166 : 1217750 53 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1316886 : 1382315 55 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1446913 : 1502401 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_15 1794971 : 1842986 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_16 1904548 : 1963818 51 Klosneuvirus(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_17 1974058 : 2031555 57 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_18 2047105 : 2111474 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2297942 : 2359290 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_20 2380081 : 2451235 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_21 2535436 : 2586608 47 Salmonella_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_22 2684903 : 2725565 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_23 2729676 : 2811811 60 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_24 2835736 : 2892709 45 Pelagibacter_phage(20.0%) protease,transposase NA
DBSCAN-SWA_25 2900208 : 3022080 117 uncultured_Mediterranean_phage(12.5%) transposase,protease NA
DBSCAN-SWA_26 3377875 : 3431616 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3437771 : 3497071 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3512009 : 3570082 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_29 4002294 : 4067206 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage