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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011734 Bordetella pertussis strain I375 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 26 0

Results visualization

1. NZ_CP011734
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011734_1 252689-252773 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011734_2 627146-627255 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011734_3 2126021-2126148 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011734_4 2911756-2911872 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011734_5 3628625-3628718 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 71085 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 78683 : 137157 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 165942 : 289022 106 Klosneuvirus(11.76%) tRNA,transposase,protease NA
DBSCAN-SWA_4 558456 : 617756 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_5 623911 : 677652 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_6 726590 : 766540 30 Pseudomonas_phage(33.33%) tRNA,transposase,integrase,protease attL 723838:723856|attR 743726:743744
DBSCAN-SWA_7 776467 : 824085 47 Bovine_alphaherpesvirus(10.0%) tRNA,transposase,holin,protease NA
DBSCAN-SWA_8 1008300 : 1102337 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_9 1132722 : 1203692 53 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_10 1251086 : 1331961 59 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_11 1416617 : 1473023 51 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_12 1548483 : 1616566 59 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_13 1652515 : 1708106 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_14 2028230 : 2076245 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_15 2137807 : 2197077 51 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_16 2207317 : 2251640 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_17 2281413 : 2345782 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2510243 : 2568487 54 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_19 2610767 : 2677267 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2876655 : 2949986 53 Catovirus(22.22%) tRNA,transposase,protease NA
DBSCAN-SWA_21 2961711 : 3011324 42 uncultured_Mediterranean_phage(50.0%) tRNA,transposase,holin NA
DBSCAN-SWA_22 3032275 : 3104769 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_23 3118276 : 3172843 45 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_24 3237301 : 3310463 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_25 3321750 : 3423961 109 uncultured_Caudovirales_phage(14.81%) transposase,tRNA,tail,protease,terminase NA
DBSCAN-SWA_26 4034815 : 4077673 36 Planktothrix_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage