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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011732 Bordetella pertussis strain I331 chromosome, complete genome 3 crisprs DinG,csa3,DEDDh,cas3 0 0 29 0

Results visualization

1. NZ_CP011732
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011732_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011732_2 623999-624108 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011732_3 3615419-3615512 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_4 233336 : 286924 47 Bacillus_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_5 555309 : 614609 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 620764 : 675554 49 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 724492 : 764442 31 Pseudomonas_phage(33.33%) tRNA,protease,transposase,integrase attL 721740:721758|attR 741628:741646
DBSCAN-SWA_8 774369 : 821987 47 Bovine_alphaherpesvirus(10.0%) tRNA,protease,holin,transposase NA
DBSCAN-SWA_9 963939 : 1038915 60 Klebsiella_phage(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_10 1042668 : 1103695 53 Catovirus(20.0%) tRNA,holin,transposase NA
DBSCAN-SWA_11 1121265 : 1186847 53 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_12 1285983 : 1354470 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1674477 : 1744129 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_14 1755625 : 1805021 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_15 1816225 : 1856916 36 Klosneuvirus(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_16 1884699 : 1950248 58 Lake_Baikal_phage(20.0%) tRNA,protease,transposase NA
DBSCAN-SWA_17 2265902 : 2327250 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_18 2348041 : 2419195 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2503395 : 2565691 54 Salmonella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_20 2651808 : 2692477 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_21 2747942 : 2820812 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_22 2823955 : 2890766 50 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_23 2921152 : 2958476 36 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_24 3026979 : 3099473 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_25 3230956 : 3299959 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_26 3315405 : 3415518 108 uncultured_Caudovirales_phage(14.29%) tRNA,transposase,protease,terminase,tail NA
DBSCAN-SWA_27 3487419 : 3533560 45 Bacillus_phage(20.0%) transposase NA
DBSCAN-SWA_28 3698862 : 3837157 122 uncultured_Mediterranean_phage(10.0%) tRNA,transposase,integrase attL 3748874:3748891|attR 3793514:3793531
DBSCAN-SWA_29 4003270 : 4068182 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage