Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011729 Bordetella pertussis strain I289 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 30 0

Results visualization

1. NZ_CP011729
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011729_1 251640-251724 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011729_2 433083-433176 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011729_3 997400-997494 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011729_4 2174699-2174826 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011729_5 3431444-3431553 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164893 : 219510 47 Diachasmimorpha_longicaudata_entomopoxvirus(14.29%) protease,tRNA,transposase NA
DBSCAN-SWA_4 225502 : 287973 54 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 391906 : 449415 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 591469 : 652660 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 657984 : 704175 50 uncultured_Caudovirales_phage(18.18%) tail,tRNA,terminase,transposase NA
DBSCAN-SWA_8 710341 : 764271 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 815864 : 887877 60 Acinetobacter_phage(20.0%) holin,transposase NA
DBSCAN-SWA_10 895511 : 958591 54 Bacillus_phage(25.0%) holin,transposase NA
DBSCAN-SWA_11 978013 : 1048280 57 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_12 1060498 : 1117880 47 uncultured_Mediterranean_phage(37.5%) holin,protease,tRNA,transposase NA
DBSCAN-SWA_13 1157579 : 1219863 49 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_14 1318999 : 1387486 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_15 1447977 : 1503465 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_16 1598162 : 1666248 59 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_17 1702197 : 1757788 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_18 2077957 : 2135236 49 Klosneuvirus(14.29%) tRNA,transposase NA
DBSCAN-SWA_19 2186485 : 2245755 51 Klosneuvirus(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_20 2255995 : 2300318 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_21 2330091 : 2394460 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_22 2543122 : 2607338 60 Salmonella_phage(16.67%) protease,tRNA,transposase NA
DBSCAN-SWA_23 2687015 : 2727684 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_24 2783149 : 2856019 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_25 2859162 : 2925973 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_26 2956359 : 3000050 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_27 3381046 : 3434787 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_28 3440942 : 3500242 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_29 3515180 : 3573253 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_30 4028568 : 4082000 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage