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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011699 Bordetella pertussis strain H766 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011699
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011699_1 250593-250677 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011699_2 519114-519207 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011699_3 1085528-1085622 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011699_4 1980913-1981040 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011699_5 3517436-3517545 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164894 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233338 : 286926 47 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 676451 : 737641 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_6 742965 : 789156 50 uncultured_Caudovirales_phage(18.18%) tail,transposase,terminase,tRNA NA
DBSCAN-SWA_7 795322 : 850300 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_8 901893 : 950915 43 Acinetobacter_phage(25.0%) transposase,holin NA
DBSCAN-SWA_9 973938 : 1089751 98 Bacillus_phage(12.5%) transposase,holin NA
DBSCAN-SWA_10 1113553 : 1168645 51 uncultured_Mediterranean_phage(37.5%) transposase,tRNA NA
DBSCAN-SWA_11 1174635 : 1246656 57 Planktothrix_phage(18.18%) protease,transposase,tRNA,holin NA
DBSCAN-SWA_12 1406077 : 1474564 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1535055 : 1590543 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_14 1883113 : 1931128 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_15 1992699 : 2051969 51 Klosneuvirus(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_16 2062209 : 2106532 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_17 2135266 : 2199635 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2386102 : 2447450 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_19 2468241 : 2539342 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_20 2623542 : 2674714 48 Salmonella_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_21 2773009 : 2813678 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_22 2817789 : 2899924 60 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_23 2923849 : 2971558 40 Pelagibacter_phage(25.0%) transposase NA
DBSCAN-SWA_24 2979555 : 3043303 55 uncultured_Mediterranean_phage(22.22%) protease,transposase NA
DBSCAN-SWA_25 3052062 : 3097632 45 Bacillus_virus(20.0%) transposase NA
DBSCAN-SWA_26 3467038 : 3520779 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3526934 : 3586234 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3601172 : 3661478 49 Planktothrix_phage(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_29 4026431 : 4079863 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage