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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011207 Bordetella pertussis strain I944 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 35 0

Results visualization

1. NZ_CP011207
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011207_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011207_2 432035-432128 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011207_3 997401-997495 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011207_4 1897017-1897144 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011207_5 3437785-3437894 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164894 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 233337 : 286925 47 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 390858 : 448367 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 591470 : 652661 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 657985 : 704176 50 uncultured_Caudovirales_phage(18.18%) tail,tRNA,transposase,terminase NA
DBSCAN-SWA_8 710342 : 764272 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 886861 : 954836 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 998365 : 1070882 60 Enterococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_11 1074635 : 1135662 51 Catovirus(20.0%) holin,tRNA,transposase NA
DBSCAN-SWA_12 1153232 : 1218816 52 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_13 1317952 : 1383432 55 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1448021 : 1503509 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_15 1695486 : 1759064 48 Klebsiella_phage(11.11%) protease,transposase NA
DBSCAN-SWA_16 1798177 : 1846192 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_17 1849585 : 1912888 55 Lake_Baikal_phage(21.43%) protease,tRNA,transposase NA
DBSCAN-SWA_18 1940671 : 1981362 37 Klosneuvirus(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_19 1992566 : 2041968 45 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_20 2053464 : 2117833 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_21 2304301 : 2365649 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_22 2386440 : 2457594 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_23 2541794 : 2592966 47 Salmonella_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_24 2691261 : 2731929 43 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_25 2736040 : 2818175 60 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_26 2842100 : 2890858 41 Pelagibacter_phage(25.0%) transposase NA
DBSCAN-SWA_27 2898855 : 2962603 55 uncultured_Mediterranean_phage(22.22%) protease,transposase NA
DBSCAN-SWA_28 2971362 : 3030542 56 Bacillus_virus(28.57%) transposase NA
DBSCAN-SWA_29 3127926 : 3191761 55 Pseudomonas_phage(30.0%) protease,tRNA,transposase NA
DBSCAN-SWA_30 3239905 : 3255142 15 Erwinia_phage(100.0%) protease,transposase NA
DBSCAN-SWA_31 3273565 : 3338449 49 Tupanvirus(12.5%) protease,transposase,tRNA,integrase,holin attL 3266959:3266977|attR 3339717:3339735
DBSCAN-SWA_32 3387387 : 3441128 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_33 3447283 : 3506583 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_34 3521521 : 3579594 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_35 4011806 : 4076718 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage