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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011195 Bordetella pertussis strain H806 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011195
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011195_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011195_2 432035-432128 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011195_3 994254-994348 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011195_4 1890962-1891089 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011195_5 3427532-3427641 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_4 233337 : 286925 47 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 390858 : 448367 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 588323 : 649513 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 654837 : 701028 50 uncultured_Caudovirales_phage(18.18%) tail,transposase,terminase,tRNA NA
DBSCAN-SWA_8 707194 : 761124 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 812717 : 884730 60 Acinetobacter_phage(20.0%) transposase,holin NA
DBSCAN-SWA_10 892364 : 955445 54 Bacillus_phage(25.0%) transposase,holin NA
DBSCAN-SWA_11 974867 : 1115117 117 uncultured_Mediterranean_phage(17.65%) transposase,holin,protease,tRNA NA
DBSCAN-SWA_12 1316135 : 1384622 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1445113 : 1500601 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_14 1793171 : 1841186 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_15 1844579 : 1906833 54 Lake_Baikal_phage(21.43%) transposase,protease,tRNA NA
DBSCAN-SWA_16 1934616 : 1975307 37 Klosneuvirus(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_17 1986511 : 2035907 45 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_18 2047403 : 2111772 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2298240 : 2359588 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_20 2380379 : 2451533 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_21 2535734 : 2598035 55 Salmonella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_22 2684152 : 2724821 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_23 2780287 : 2853157 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_24 2856300 : 2923111 49 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_25 2953497 : 2997188 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_26 3377134 : 3430875 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3437030 : 3496330 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3511268 : 3570390 48 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_29 4025705 : 4079137 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage