CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019405	Salmonella enterica subsp. enterica serovar Bergen str. ST350 chromosome, complete genome	5 crisprs	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL,PD-DExK	0	12	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019405_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019405_1

306986-307626

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

10 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP019405_1

>merge|NZ_CP019405|1|306986-307626|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAGGCAAACGGCAGGTTGCGCGCCAGTTGAGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCTTATTAATGAGTTTGCGGCGGTGTTAATGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGCTTTGACAATGGCCTGGTTAAGTTGGAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTACGAGGCACTATTCGGCAAGAAACCGCACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAGCCACAGCGCAAAAGAGGTCTATTCCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAACAGGGGGGGGCGACAGCGTACTGGGTAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAGCGCGTAAGCTGCTGGCTGTGTCGGTCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGAAACCAAAATCGACGCCGCGACAGCACCTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGTTTCGACGCCTCGTAACAACATCATATAGGTGTTCCCCGCGCTAGCGGGGATAAACCGCACGAGTGGCAAATTGATTTCGACGAAAAACCGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP019405|1|1|306986-307565|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCAAACGGCAGGTTGCGCGCCAGTTGAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCTTATTAATGAGTTTGCGGCGGTGTTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCTTTGACAATGGCCTGGTTAAGTTGGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTACGAGGCACTATTCGGCAAGAAACCGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAGCCACAGCGCAAAAGAGGTCTATTCCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAACAGGGGGGGGCGACAGCGTACTGGGTAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCGCGTAAGCTGCTGGCTGTGTCGGTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGAAACCAAAATCGACGCCGCGACAGCACCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGTTTCGACGCCTCGTAACAACATCATATAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG

>NZ_CP019405|1|1|306986-307626|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCAAACGGCAGGTTGCGCGCCAGTTGAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCTTATTAATGAGTTTGCGGCGGTGTTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCTTTGACAATGGCCTGGTTAAGTTGGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTACGAGGCACTATTCGGCAAGAAACCGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAGCCACAGCGCAAAAGAGGTCTATTCCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAACAGGGGGGGGCGACAGCGTACTGGGTAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCGCGTAAGCTGCTGGCTGTGTCGGTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGAAACCAAAATCGACGCCGCGACAGCACCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGTTTCGACGCCTCGTAACAACATCATATAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CACGAGTGGCAAATTGATTTCGACGAAAAACC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP019405|1|1|306986-307626|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCAAACGGCAGGTTGCGCGCCAGTTGAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCTTATTAATGAGTTTGCGGCGGTGTTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCTTTGACAATGGCCTGGTTAAGTTGGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTACGAGGCACTATTCGGCAAGAAACCGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAGCCACAGCGCAAAAGAGGTCTATTCCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAACAGGGGGGGGCGACAGCGTACTGGGTAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCGCGTAAGCTGCTGGCTGTGTCGGTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGAAACCAAAATCGACGCCGCGACAGCACCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGTTTCGACGCCTCGTAACAACATCATATAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CACGAGTGGCAAATTGATTTCGACGAAAAACC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019405.1\|WP_001199961.1\|306155_306827_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP019405.1\|WP_000036734.1\|304721_306020_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP019405.1\|WP_000832396.1\|296204_296675_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP019405.1\|WP_076936904.1\|311193_312906_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP019405.1\|WP_064042870.1\|307723_308521_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP019405.1\|WP_000210454.1\|301973_302774_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP019405.1\|WP_076936908.1\|315226_317890_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP019405.1\|WP_076936910.1\|320031_321090_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP019405.1\|WP_076936902.1\|298001_300701_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP019405.1\|WP_000842511.1\|300780_301368_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP019405.1\|WP_076936905.1\|313007_313742_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019405.1\|WP_000108313.1\|308608_308971_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP019405.1\|WP_076936903.1\|309394_311194_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP019405.1\|WP_076936909.1\|317901_319461_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP019405.1\|WP_023202651.1\|296689_297196_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP019405.1\|WP_076936906.1\|313829_314783_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP019405.1\|WP_000117946.1\|319457_320018_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP019405.1\|WP_000210863.1\|303001_304639_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP019405.1\|WP_001044459.1\|297215_297989_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP019405.1\|WP_076936901.1\|295671_296208_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168

Protein	Function_ID	Function_description	E-value
NZ_CP019405.1\|WP_001199961.1\|306155_306827_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP019405.1\|WP_000036734.1\|304721_306020_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP019405.1\|WP_000832396.1\|296204_296675_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
NZ_CP019405.1\|WP_076936904.1\|311193_312906_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP019405.1\|WP_064042870.1\|307723_308521_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	2.55787e-103
NZ_CP019405.1\|WP_000210454.1\|301973_302774_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.36327e-159
NZ_CP019405.1\|WP_076936908.1\|315226_317890_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP019405.1\|WP_076936910.1\|320031_321090_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.93818e-137
NZ_CP019405.1\|WP_076936902.1\|298001_300701_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP019405.1\|WP_000842511.1\|300780_301368_-\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	6.76622e-100
NZ_CP019405.1\|WP_076936905.1\|313007_313742_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.18387e-137
NZ_CP019405.1\|WP_000108313.1\|308608_308971_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP019405.1\|WP_076936903.1\|309394_311194_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP019405.1\|WP_076936909.1\|317901_319461_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.11267e-173
NZ_CP019405.1\|WP_023202651.1\|296689_297196_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	9.68477e-105
NZ_CP019405.1\|WP_076936906.1\|313829_314783_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP019405.1\|WP_000117946.1\|319457_320018_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP019405.1\|WP_000210863.1\|303001_304639_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP019405.1\|WP_001044459.1\|297215_297989_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP019405.1\|WP_076936901.1\|295671_296208_-\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	9.12259e-120

>NZ_CP019405.1|WP_001199961.1|306155_306827_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP019405.1|WP_000036734.1|304721_306020_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP019405.1|WP_000210863.1|303001_304639_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP019405.1|WP_000210454.1|301973_302774_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP019405.1|WP_000842511.1|300780_301368_-|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDSILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP019405.1|WP_076936902.1|298001_300701_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGVDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDLPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP019405.1|WP_001044459.1|297215_297989_-|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP019405.1|WP_023202651.1|296689_297196_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP019405.1|WP_000832396.1|296204_296675_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP019405.1|WP_076936901.1|295671_296208_-|fimbrial-protein
MNRIFQTAGYLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLAMEPSSEASGFAIGVETAAQQPVSINATEGTAFVLKEGITTINLQARLQKYAGEDVMPGEFSGSATVSFEYQ
>NZ_CP019405.1|WP_064042870.1|307723_308521_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP019405.1|WP_000108313.1|308608_308971_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP019405.1|WP_076936903.1|309394_311194_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVATPSQSVATGSVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVSDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP019405.1|WP_076936904.1|311193_312906_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESELHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKVKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP019405.1|WP_076936905.1|313007_313742_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNDLPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFLETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP019405.1|WP_076936906.1|313829_314783_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDYALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP019405.1|WP_076936908.1|315226_317890_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSGLRVRQSWWSKHKDEFERLDGELLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP019405.1|WP_076936909.1|317901_319461_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLKRIMTARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP019405.1|WP_000117946.1|319457_320018_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP019405.1|WP_076936910.1|320031_321090_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYVQETAFKDFNVMNQQGSMKDVLDFICA

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Crispr_ID: NZ_CP019405_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019405_2

323786-324931

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

18 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP019405_2

>merge|NZ_CP019405|2|323786-324931|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGCCGCACAGGAAGTAGCCGAAAAGGTGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCAGCGAGAAACGCACGCCGACACACTCGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCTAATGGTTATAGATATCCATGCGGGGAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGACGTGTTCGCCATTCTCTCGCGTGCTGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAATGGCATTTCTATCCCTTCGGCTGATTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGGCCAGTAGATTGGCCGCGTAATTGGTGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCAGCGCCGTGCCTGCGGTGCAGTTCGTTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCACGAGGTGCTCCCGTTTGCCACCAACAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGATAACAATTACATAACAGGTGTGACAGACGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGAAAAATTGACGCTATCAGGGAGAGCGCCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCAGACGGCTGAAAAATTAGGGCTGGCGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGACACGGCGGCGGCGCTGGGCCACTCCGAAGAAGTGTTCCCCGCGCCAGCGGGGGTAAACCGCTTGGATTGTGGCGCATCCTCCCACGTTGAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTGTCCACGCCGACATGTGTTCCCCCAAGGTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCCAGTTTGAGCAAATCCCGGATAATATCCGGTTATGTCGATTGACAATGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAGTTAATCTAACCAGGTTAATTAATGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTAAAACTTCCTGAAATTTACGCTCTAGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCTTTGCTGGCAACATTCACCACATAGCCCGTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP019405|2|2|323786-324608|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCCGCACAGGAAGTAGCCGAAAAGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGCGAGAAACGCACGCCGACACACTCGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTAATGGTTATAGATATCCATGCGGGGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGACGTGTTCGCCATTCTCTCGCGTGCTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATGGCATTTCTATCCCTTCGGCTGATTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGCCAGTAGATTGGCCGCGTAATTGGTGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGCGCCGTGCCTGCGGTGCAGTTCGTTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACGAGGTGCTCCCGTTTGCCACCAACAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATAACAATTACATAACAGGTGTGACAGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAAAATTGACGCTATCAGGGAGAGCGCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCAGACGGCTGAAAAATTAGGGCTGGCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACGGCGGCGGCGCTGGGCCACTCCGAAGAA
GTGTTCCCCGCGCCAGCGGGGGTAAACCG	CTTGGATTGTGGCGCATCCTCCCACGTTGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGTCCACGCCGACATGTGTTCCCCCAAGGTTCGTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCAGTTTGAGCAAATCCCGGATAATATCCGGTTATGTCGATTGACAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAGTTAATCTAACCAGGTTAATTAATGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTAAAACTTCCTGAAATTTACGCTCTAGTGC


>NZ_CP019405|2|2|323786-324931|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCCGCACAGGAAGTAGCCGAAAAGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGCGAGAAACGCACGCCGACACACTCGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTAATGGTTATAGATATCCATGCGGGGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGACGTGTTCGCCATTCTCTCGCGTGCTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATGGCATTTCTATCCCTTCGGCTGATTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGCCAGTAGATTGGCCGCGTAATTGGTGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGCGCCGTGCCTGCGGTGCAGTTCGTTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACGAGGTGCTCCCGTTTGCCACCAACAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATAACAATTACATAACAGGTGTGACAGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAAAATTGACGCTATCAGGGAGAGCGCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCAGACGGCTGAAAAATTAGGGCTGGCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACGGCGGCGGCGCTGGGCCACTCCGAAGAA
GTGTTCCCCGCGCCAGCGGGGGTAAACCG	CTTGGATTGTGGCGCATCCTCCCACGTTGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCACGCCGACATGTGTTCCCCCAAGGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCAGTTTGAGCAAATCCCGGATAATATCCGGTTATGTCGATTGACAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAGTTAATCTAACCAGGTTAATTAATGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTAAAACTTCCTGAAATTTACGCTCTAGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCTTTGCTGGCAACATTCACCACATAGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP019405|2|2|323786-324931|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCCGCACAGGAAGTAGCCGAAAAGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGCGAGAAACGCACGCCGACACACTCGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTAATGGTTATAGATATCCATGCGGGGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGACGTGTTCGCCATTCTCTCGCGTGCTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATGGCATTTCTATCCCTTCGGCTGATTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGCCAGTAGATTGGCCGCGTAATTGGTGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGCGCCGTGCCTGCGGTGCAGTTCGTTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACGAGGTGCTCCCGTTTGCCACCAACAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATAACAATTACATAACAGGTGTGACAGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAAAATTGACGCTATCAGGGAGAGCGCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCAGACGGCTGAAAAATTAGGGCTGGCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACGGCGGCGGCGCTGGGCCACTCCGAAGAA
GTGTTCCCCGCGCCAGCGGGGGTAAACCG	CTTGGATTGTGGCGCATCCTCCCACGTTGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCACGCCGACATGTGTTCCCCCAAGGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCAGTTTGAGCAAATCCCGGATAATATCCGGTTATGTCGATTGACAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAGTTAATCTAACCAGGTTAATTAATGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTAAAACTTCCTGAAATTTACGCTCTAGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCTTTGCTGGCAACATTCACCACATAGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP019405|2|3|324641-324870|PILER-CR
	CTGGCCGCACAGGAAGTAGCCGAAAAGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGCGAGAAACGCACGCCGACACACTCGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTAATGGTTATAGATATCCATGCGGGGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGACGTGTTCGCCATTCTCTCGCGTGCTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATGGCATTTCTATCCCTTCGGCTGATTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGCCAGTAGATTGGCCGCGTAATTGGTGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGCGCCGTGCCTGCGGTGCAGTTCGTTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACGAGGTGCTCCCGTTTGCCACCAACAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATAACAATTACATAACAGGTGTGACAGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAAAATTGACGCTATCAGGGAGAGCGCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCAGACGGCTGAAAAATTAGGGCTGGCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACGGCGGCGGCGCTGGGCCACTCCGAAGAA
GTGTTCCCCGCGCCAGCGGGGGTAAACCG	CTTGGATTGTGGCGCATCCTCCCACGTTGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGTCCACGCCGACATGTGTTCCCCCAAGGTTCGTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCAGTTTGAGCAAATCCCGGATAATATCCGGTTATGTCGATTGACAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAGTTAATCTAACCAGGTTAATTAATGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTAAAACTTCCTGAAATTTACGCTCTAGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019405.1\|WP_001537530.1\|329241_329565_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP019405.1\|WP_076936911.1\|321100_321847_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP019405.1\|WP_076936912.1\|326241_327150_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP019405.1\|WP_001219244.1\|330795_331275_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP019405.1\|WP_076936908.1\|315226_317890_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP019405.1\|WP_076936910.1\|320031_321090_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP019405.1\|WP_000517480.1\|329755_330067_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP019405.1\|WP_076936909.1\|317901_319461_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP019405.1\|WP_076936906.1\|313829_314783_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP019405.1\|WP_076936905.1\|313007_313742_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019405.1\|WP_045342082.1\|331271_332321_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP019405.1\|WP_000117946.1\|319457_320018_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP019405.1\|WP_001221537.1\|332301_333063_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP019405.1\|WP_064013262.1\|321828_322479_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP019405.1\|WP_001092269.1\|327159_328599_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP019405.1\|WP_000490481.1\|324945_325992_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP019405.1\|WP_000144832.1\|322475_323396_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP019405.1\|WP_001518648.1\|323395_323689_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP019405.1\|WP_001173663.1\|328585_329191_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP019405.1\|WP_000741652.1\|330085_330796_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670

Protein	Function_ID	Function_description	E-value
NZ_CP019405.1\|WP_001537530.1\|329241_329565_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
NZ_CP019405.1\|WP_076936911.1\|321100_321847_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.74492e-48
NZ_CP019405.1\|WP_076936912.1\|326241_327150_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP019405.1\|WP_001219244.1\|330795_331275_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP019405.1\|WP_076936908.1\|315226_317890_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP019405.1\|WP_076936910.1\|320031_321090_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.93818e-137
NZ_CP019405.1\|WP_000517480.1\|329755_330067_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP019405.1\|WP_076936909.1\|317901_319461_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.11267e-173
NZ_CP019405.1\|WP_076936906.1\|313829_314783_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP019405.1\|WP_076936905.1\|313007_313742_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.18387e-137
NZ_CP019405.1\|WP_045342082.1\|331271_332321_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP019405.1\|WP_000117946.1\|319457_320018_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP019405.1\|WP_001221537.1\|332301_333063_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
NZ_CP019405.1\|WP_064013262.1\|321828_322479_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	8.78501e-77
NZ_CP019405.1\|WP_001092269.1\|327159_328599_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP019405.1\|WP_000490481.1\|324945_325992_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP019405.1\|WP_000144832.1\|322475_323396_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NZ_CP019405.1\|WP_001518648.1\|323395_323689_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP019405.1\|WP_001173663.1\|328585_329191_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP019405.1\|WP_000741652.1\|330085_330796_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.50232e-119

>NZ_CP019405.1|WP_001518648.1|323395_323689_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP019405.1|WP_000144832.1|322475_323396_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP019405.1|WP_064013262.1|321828_322479_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVLNDPALFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP019405.1|WP_076936911.1|321100_321847_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDQFNTLKLTLPGLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP019405.1|WP_076936910.1|320031_321090_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYVQETAFKDFNVMNQQGSMKDVLDFICA
>NZ_CP019405.1|WP_000117946.1|319457_320018_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP019405.1|WP_076936909.1|317901_319461_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLKRIMTARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP019405.1|WP_076936908.1|315226_317890_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSGLRVRQSWWSKHKDEFERLDGELLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP019405.1|WP_076936906.1|313829_314783_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDYALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP019405.1|WP_076936905.1|313007_313742_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNDLPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFLETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP019405.1|WP_000490481.1|324945_325992_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP019405.1|WP_076936912.1|326241_327150_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQLGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQVGSMELKKRQGYF
>NZ_CP019405.1|WP_001092269.1|327159_328599_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP019405.1|WP_001173663.1|328585_329191_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP019405.1|WP_001537530.1|329241_329565_+|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP019405.1|WP_000517480.1|329755_330067_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP019405.1|WP_000741652.1|330085_330796_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKTAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP019405.1|WP_001219244.1|330795_331275_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP019405.1|WP_045342082.1|331271_332321_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELLITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP019405.1|WP_001221537.1|332301_333063_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: NZ_CP019405_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019405_3

808570-808659

Orphan

Consensus_repeat	Method
TTGTCCAACGGATGTCCAACGGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019405_3

>merge|NZ_CP019405|3|808570-808659|CRISPRCasFinder
TTGTCCAACGGATGTCCAACGGATGTCCAACGCAAACACCAGTAATGACGCGGCTCACAGCAAATGTTGTCCAACGGATGTCCAACGATT

>NZ_CP019405|3|3|808570-808659|CRISPRCasFinder
TTGTCCAACGGATGTCCAACGGAT	GTCCAACGCAAACACCAGTAATGACGCGGCTCACAGCAAATG
TTGTCCAACGGATGTCCAACGATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019405.1\|WP_038989108.1\|804052_804640_+\|superinfection-exclusion-B-family-protein	unknown	unknown	gnl\|CDD\|379492
NZ_CP019405.1\|WP_000386647.1\|811906_812266_+\|DUF2591-family-protein	unknown	unknown	gnl\|CDD\|107039
NZ_CP019405.1\|WP_000424165.1\|807722_808001_+\|lambda-phage-CII-family-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP019405.1\|WP_076937042.1\|803643_803838_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|287970
NZ_CP019405.1\|WP_001535921.1\|813156_813447_+\|DUF1364-domain-containing-protein	unknown	unknown	gnl\|CDD\|377777
NZ_CP019405.1\|WP_023228640.1\|804652_805015_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019405.1\|WP_023206529.1\|808035_808182_+\|DUF2740-family-protein	unknown	unknown	gnl\|CDD\|287804
NZ_CP019405.1\|WP_000950962.1\|812265_812442_+\|protein-ninF	unknown	unknown	gnl\|CDD\|283468
NZ_CP019405.1\|WP_042948990.1\|807373_807592_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP019405.1\|WP_076937047.1\|811727_811904_+\|NinE-family-protein	unknown	unknown	gnl\|CDD\|283078
NZ_CP019405.1\|WP_076937048.1\|812434_813157_+\|phage-antirepressor-KilAC-domain-containing-protein	unknown	unknown	gnl\|CDD\|226171
NZ_CP019405.1\|WP_076937044.1\|805693_806557_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019405.1\|WP_076937045.1\|806620_807268_-\|LexA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224885
NZ_CP019405.1\|WP_023259230.1\|811165_811591_+\|recombination-protein-NinB	unknown	unknown	gnl\|CDD\|368607
NZ_CP019405.1\|WP_001580121.1\|810576_811164_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379158
NZ_CP019405.1\|WP_076937041.1\|803059_803560_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379158
NZ_CP019405.1\|WP_000679702.1\|811587_811761_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340181
NZ_CP019405.1\|WP_076937046.1\|809063_810500_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP019405.1\|WP_076937043.1\|805361_805565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019405.1\|WP_001008199.1\|813443_813806_+\|RusA-family-crossover-junction-endodeoxyribonuclease	unknown	unknown	gnl\|CDD\|182075

Protein	Function_ID	Function_description	E-value
NZ_CP019405.1\|WP_038989108.1\|804052_804640_+\|superinfection-exclusion-B-family-protein	gnl\|CDD\|379492	pfam14163, SieB, Super-infection exclusion protein B. This family includes superinfection exclusion proteins. These proteins prevent the growth of superinfecting phage which are insensitive to repression. It aborts lytic development of superinfecting phage.	3.93075e-25
NZ_CP019405.1\|WP_000386647.1\|811906_812266_+\|DUF2591-family-protein	gnl\|CDD\|107039	PHA01519, PHA01519, hypothetical protein.	3.12748e-21
NZ_CP019405.1\|WP_000424165.1\|807722_808001_+\|lambda-phage-CII-family-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	6.66957e-42
NZ_CP019405.1\|WP_076937042.1\|803643_803838_-\|restriction-endonuclease	gnl\|CDD\|287970	pfam11058, Ral, Antirestriction protein Ral. Ral alleviates restriction and enhances modification by the E.Coli restriction and modification system.	1.27389e-31
NZ_CP019405.1\|WP_001535921.1\|813156_813447_+\|DUF1364-domain-containing-protein	gnl\|CDD\|377777	pfam07102, DUF1364, Protein of unknown function (DUF1364). This family consists of several bacterial and phage proteins of around 95 residues in length. The function of this family is unknown.	3.61897e-50
NZ_CP019405.1\|WP_076937046.1\|809063_810500_+\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	0
NZ_CP019405.1\|WP_023206529.1\|808035_808182_+\|DUF2740-family-protein	gnl\|CDD\|287804	pfam10872, DUF2740, Protein of unknown function (DUF2740). This family of proteins with unknown function has a highly conserved sequence.	2.98231e-16
NZ_CP019405.1\|WP_000950962.1\|812265_812442_+\|protein-ninF	gnl\|CDD\|283468	pfam05810, NinF, NinF protein. This family consists of several bacteriophage NinF proteins as well as related sequences from E. coli.	3.34566e-20
NZ_CP019405.1\|WP_042948990.1\|807373_807592_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.217e-08
NZ_CP019405.1\|WP_076937047.1\|811727_811904_+\|NinE-family-protein	gnl\|CDD\|283078	pfam05322, NinE, NINE Protein. This family consists of NINE proteins from several bacteriophages and from E. coli.	2.67925e-26
NZ_CP019405.1\|WP_076937048.1\|812434_813157_+\|phage-antirepressor-KilAC-domain-containing-protein	gnl\|CDD\|226171	COG3645, COG3645, Uncharacterized phage-encoded protein [Function unknown].	1.35639e-49
NZ_CP019405.1\|WP_076937045.1\|806620_807268_-\|LexA-family-transcriptional-regulator	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	2.55908e-49
NZ_CP019405.1\|WP_076937041.1\|803059_803560_-\|HNH-endonuclease	gnl\|CDD\|379158	pfam13392, HNH_3, HNH endonuclease. This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases.	6.91357e-08
NZ_CP019405.1\|WP_001580121.1\|810576_811164_+\|HNH-endonuclease	gnl\|CDD\|379158	pfam13392, HNH_3, HNH endonuclease. This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases.	9.14574e-13
NZ_CP019405.1\|WP_023259230.1\|811165_811591_+\|recombination-protein-NinB	gnl\|CDD\|368607	pfam05772, NinB, NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	3.65996e-48
NZ_CP019405.1\|WP_000679702.1\|811587_811761_+\|hypothetical-protein	gnl\|CDD\|340181	pfam17466, NinD, Family of unknown function. This is a family of unknown function found in Enterobacteria phage P22 and Enterobacteria phage lambda.	5.83527e-32
NZ_CP019405.1\|WP_001008199.1\|813443_813806_+\|RusA-family-crossover-junction-endodeoxyribonuclease	gnl\|CDD\|182075	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed.	4.00861e-41

>NZ_CP019405.1|WP_023206529.1|808035_808182_+|DUF2740-family-protein
MPKQLSPDQDKIHKHILRDRFLSSFKQPGRFRAELEKVKLMQKEKGHE
>NZ_CP019405.1|WP_000424165.1|807722_808001_+|lambda-phage-CII-family-protein
MELTSTRKKANAITSSILNRIAIRGQRKVADALGINESQISRWKGDFIPKIGMLLAVLEWGVEDEELAELAKKVAHLLTKEKAPKNGEFFEA
>NZ_CP019405.1|WP_042948990.1|807373_807592_+|helix-turn-helix-transcriptional-regulator
MNNIAKQRKEIGVSQAALASAIGWGQSRIANYELNIRTPSLSDCRSIVEGLKKLGCKCSLDDVFPPSESKAA
>NZ_CP019405.1|WP_076937045.1|806620_807268_-|LexA-family-transcriptional-regulator
MKTMHEIIGERIKSLREAKGLSQAQLAKLCGWAAPSRLGNYELGTRKVSADDALTLGQVLGVPPSQILFGDSTGAIFREYNYPVFSHVQAGMFSPELRTFTQRDAEGWVSTTKKASDAAFWLEVDGHSMTAPAGSRPSFPEGMLILVDPEEPVDPGDFCIARLDGDEFTFKRLIKDSGQVYLQPLNPQFPMMPCNENCRVVGKVVASQWPDETFG
>NZ_CP019405.1|WP_076937044.1|805693_806557_-|hypothetical-protein
MEDGVLQDIKISLRYDGKDALNHEIDLNCLGESLKGFSKVLSTAASFSATQKYSKLVTYQEVKVYAREARANCFTLDAVLNFVTQNQLFSGIAATILGAILQYIFARNSNKKDEMKALQQVLEKAIESLGNKDAGTIDKLISVIDKMAVELRPSVRQAVSPIGNTCDQISIATNIDGCLVKVNEQDKAQIDKLDDDEVLGLREYRAYLTEFDAQNMTAKIILDGDESKKRITSDISDPAASKKNNPYLNALSAYISTKGDVSSIFTITAKATVKKGQINRLFIVDAK
>NZ_CP019405.1|WP_076937043.1|805361_805565_+|hypothetical-protein
MKSEDEFFAELRPQVIEILGTAVMQVLVEQREPSREALIEMIQVLWQEDDVDLAVELAIDVLSLPKE
>NZ_CP019405.1|WP_023228640.1|804652_805015_-|hypothetical-protein
MTRRTAFNGSASGRRRERRAALQNAVTASSEVLHRPTLSRAQIQAKGKHETPKRIEDAKSLQFMAKDAFWQLEEYRRNLERAAIVYANEFGHKPPETGVCLPDVALYAAGHRKSKQITAR
>NZ_CP019405.1|WP_038989108.1|804052_804640_+|superinfection-exclusion-B-family-protein
MNNSWWQELMHFFLQGMTLKQLIHMLIILILLIVVMPVSVKEWVNLHNPEILPHYWMYYILLFCVSYVLNGVFNSVYHAVTERIEALTAQRRKVREEKVVRDLFDSLTPGERAYLAFAVAANNQLKTEKGSPESISLLEKGLITRLPSVIGYPDIDRFVIPEKYFNECYMRFAGKSDILMNELIAQDEQAKKITT
>NZ_CP019405.1|WP_076937042.1|803643_803838_-|restriction-endonuclease
MTTTIDTNQWCSRFVKCKGCKLDAECMVKPEEMALVRVDGKIVDKWAIRTTAMIARELEKLKST
>NZ_CP019405.1|WP_076937041.1|803059_803560_-|HNH-endonuclease
MNSADLSKILEYEPSTGVFRWNKSKGTALAGDVAGSVNHHGYREITIDGKKLQANRLAWLFVTGMFPNGVIDHINRVRDDNRFSNLRDISVAENNLNKSIRLDNKSGTSGVNWDIKREKWRATGQINRKQKHLGYFKNIDDAIEARRIFFRKYHLTSKEYAYEVTE
>NZ_CP019405.1|WP_076937046.1|809063_810500_+|AAA-family-ATPase
MTDNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKILFEEITRMHREQKPVDGLTLFDELERKSLTVSVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINRMTEATELLYSRNGMTATQKYEAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVGDLEKRFDPSGEQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKKAALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANRLSEIDLLYIDDTPGLSLAQIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLAYGMITKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGNTGTVYCIQANGAIYDTDQQSAEMRRREREEPQSKKKGGF
>NZ_CP019405.1|WP_001580121.1|810576_811164_+|HNH-endonuclease
MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPINQITQQRLKEVLLYDELTGKFTWKVKKCQRMNAGDIAGHKSSEGYWVIKVDGKLYKAHRLAWLYMNGSLPKSDIDHINLVRDDNRIANLRLATRSQNIQNVNKKANNKSGYKGVSWDKKSRKWRAQIVINKRKVNLGFYDDPKEAHKVYANKADECFGEFARY
>NZ_CP019405.1|WP_023259230.1|811165_811591_+|recombination-protein-NinB
MKCVKYHLTNESIRYNAIQYLRTCDLDIIVEFKQRNRSLDQNRKLWACLGDVSRQVNWHGRWLDAESWKCVFTAALKQQDVVPNLSGNGFVVIGQSTSRMRVSEFAELLELIQAFGTERGVKWSDEARLALEWKARFGDAA
>NZ_CP019405.1|WP_000679702.1|811587_811761_+|hypothetical-protein
MKHCYRCGESKDDYRFRPNQPYWHQWCIRCERSPVGNFPLPETKEDVWHDSDEVSPT
>NZ_CP019405.1|WP_076937047.1|811727_811904_+|NinE-family-protein
MARQRRSITDIICENCKYIPTKRSRNKPKPIPKESDVKTFNYTAHLWDIRWLRERARK
>NZ_CP019405.1|WP_000386647.1|811906_812266_+|DUF2591-family-protein
MDYSQLSDFEINVAVFEAIHNGSPDYKEGENGAMVFISFEGDIVNGDAVEVEVERGSFNPCANPADAWPIIEKYRISIINLDEDEWGARGVAYCKSKRAIHENPLRAAMIVFLMMQRIQ
>NZ_CP019405.1|WP_000950962.1|812265_812442_+|protein-ninF
MLSPSQSLQYQKESVERALTCANCGQKLHVLEVHVCEHCCAELMSDPNSSMYEEEDDE
>NZ_CP019405.1|WP_076937048.1|812434_813157_+|phage-antirepressor-KilAC-domain-containing-protein
MNELINGNAIKMTSIEIAELVGKRHDNVKRTIETLAKNGVIRLPQIEVSGRINNLGFNVQYEHYVFEGEQGKRDSIVVVAQLSPEFTARLVDRWRELEEAVVNIPKTLPEALRLAADLAEQKMQLENQLAIAAPKVEFADRVGEASGILIGNFAKVVGIGPNKLFAWMRDHKILIASGSRRNVPMQEYMDRGYFTVKETAVNTNHGIQISFTTKITGRGQQWLTRKLLDNGMLKVTGEAA
>NZ_CP019405.1|WP_001535921.1|813156_813447_+|DUF1364-domain-containing-protein
MANLRKEARGRECQVRIYGVCNGNPETTVLAHYRMAGICGTGMKPDDLIGAWACSACHDEIDRRTYNLDNKDARLYHLEGVIRTQAILLKEGKIKS
>NZ_CP019405.1|WP_001008199.1|813443_813806_+|RusA-family-crossover-junction-endodeoxyribonuclease
MNEYQFVLPYPPSVNTYWRRRGSQYYISDKGQKYRKDVQQIIRQLKLDIFTKSRLRIKVIADVPDSRRRDLDNILKGLLDSLIHAGFAEDDEQFDDIRVIRGVKVPGGRLGIKITELENA

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Crispr_ID: NZ_CP019405_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019405_4

4205377-4205471

Unclear

Consensus_repeat	Method
ACCGGGTCTACTGGCTCAGGGTCTAC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP019405_4

>merge|NZ_CP019405|4|4205377-4205471|CRISPRCasFinder
ACCGGGTCTACTGGCTCAGGGTCTACTGGATCAGGGTCCACCGGATCGGGAATCACAGGGTCAGGGATAACCGGGTCTACTGGATCAGGGTCTAC

>NZ_CP019405|4|4|4205377-4205471|CRISPRCasFinder
ACCGGGTCTACTGGCTCAGGGTCTAC	TGGATCAGGGTCCACCGGATCGGGAATCACAGGGTCAGGGATA
ACCGGGTCTACTGGATCAGGGTCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019405.1\|WP_000535970.1\|4195443_4196346_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP019405.1\|WP_001068433.1\|4221308_4221998_-\|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH	unknown	unknown	gnl\|CDD\|236837
NZ_CP019405.1\|WP_000834256.1\|4209895_4211278_+\|glycoside-pentoside-hexuronide-family-transporter	unknown	unknown	gnl\|CDD\|183145
NZ_CP019405.1\|WP_000115428.1\|4215540_4216932_-\|xanthine/proton-symporter-XanP	unknown	unknown	gnl\|CDD\|273276
NZ_CP019405.1\|WP_076937721.1\|4197766_4200493_+\|magnesium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|237914
NZ_CP019405.1\|WP_076937727.1\|4219221_4221303_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP019405.1\|WP_000766665.1\|4213710_4215420_-\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|282957
NZ_CP019405.1\|WP_000749540.1\|4194459_4195401_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP019405.1\|WP_001521985.1\|4203787_4204252_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019405.1\|WP_076937720.1\|4196851_4197547_+\|MgtC-family-protein	unknown	unknown	gnl\|CDD\|185283
NZ_CP019405.1\|WP_076937725.1\|4207273_4207891_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225360
NZ_CP019405.1\|WP_078056657.1\|4202919_4203777_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226233
NZ_CP019405.1\|WP_000462251.1\|4217159_4218365_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
NZ_CP019405.1\|WP_188317990.1\|4208620_4208758_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366690
NZ_CP019405.1\|WP_001082118.1\|4200514_4200607_+\|protein-MgtR	unknown	unknown	unknown
NZ_CP019405.1\|WP_001541135.1\|4202753_4202867_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019405.1\|WP_076937722.1\|4200807_4201287_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019405.1\|WP_076937726.1\|4218367_4219219_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019405.1\|WP_076937723.1\|4201454_4202135_-\|hydrolase	unknown	unknown	gnl\|CDD\|238494
NZ_CP019405.1\|WP_000703003.1\|4211289_4213608_+\|alpha-xylosidase	unknown	unknown	gnl\|CDD\|236731

Protein	Function_ID	Function_description	E-value
NZ_CP019405.1\|WP_000535970.1\|4195443_4196346_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.62239e-50
NZ_CP019405.1\|WP_001068433.1\|4221308_4221998_-\|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH	gnl\|CDD\|236837	PRK11081, PRK11081, tRNA guanosine-2'-O-methyltransferase; Provisional.	1.84412e-177
NZ_CP019405.1\|WP_000834256.1\|4209895_4211278_+\|glycoside-pentoside-hexuronide-family-transporter	gnl\|CDD\|183145	PRK11462, PRK11462, putative transporter; Provisional.	0
NZ_CP019405.1\|WP_000115428.1\|4215540_4216932_-\|xanthine/proton-symporter-XanP	gnl\|CDD\|273276	TIGR00801, Uric_acid_permease, uracil-xanthine permease. The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40) Most of the functionally characterized members of the NCS2 family are transporters specific for nucleobases including both purines and pyrimidines. However, two closely related rat members of the family, SVCT1 and SVCT2, localized to different tissues of the body, cotransport L-ascorbate and Na+ with a high degree of specificity and high affinity for the vitamin. The NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39). [Transport and binding proteins, Nucleosides, purines and pyrimidines].	2.19228e-145
NZ_CP019405.1\|WP_076937721.1\|4197766_4200493_+\|magnesium-translocating-P-type-ATPase	gnl\|CDD\|237914	PRK15122, PRK15122, magnesium-transporting ATPase; Provisional.	0
NZ_CP019405.1\|WP_076937727.1\|4219221_4221303_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP019405.1\|WP_000766665.1\|4213710_4215420_-\|AsmA-family-protein	gnl\|CDD\|282957	pfam05170, AsmA, AsmA family. The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.	4.4399e-21
NZ_CP019405.1\|WP_000749540.1\|4194459_4195401_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	1.67877e-146
NZ_CP019405.1\|WP_076937723.1\|4201454_4202135_-\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	2.90277e-58
NZ_CP019405.1\|WP_076937720.1\|4196851_4197547_+\|MgtC-family-protein	gnl\|CDD\|185283	PRK15385, PRK15385, MgtC family protein.	1.87288e-154
NZ_CP019405.1\|WP_076937725.1\|4207273_4207891_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225360	COG2771, CsgD, DNA-binding HTH domain-containing proteins [Transcription].	0.00174271
NZ_CP019405.1\|WP_078056657.1\|4202919_4203777_+\|transcriptional-regulator	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	5.85532e-40
NZ_CP019405.1\|WP_000462251.1\|4217159_4218365_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019405.1\|WP_188317990.1\|4208620_4208758_-\|hypothetical-protein	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	0.000104924
NZ_CP019405.1\|WP_000703003.1\|4211289_4213608_+\|alpha-xylosidase	gnl\|CDD\|236731	PRK10658, PRK10658, putative alpha-glucosidase; Provisional.	0

>NZ_CP019405.1|WP_001521985.1|4203787_4204252_+|hypothetical-protein
MLACLTLLFLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQANLTLDFMYSLKKRTGVVSISGTYYVDNKMSGVIRRDVSYVWSENKDSTHFISTDINKVTRDETLSDAVIETVLPDFYVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH
>NZ_CP019405.1|WP_078056657.1|4202919_4203777_+|transcriptional-regulator
MSCYAATASDYTQWCLLTLSNYVMFWHGNNAMLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWEEDGMVVSANTLYQNISIIRRGLRTVGENEDTLIITVPRRGFQIEPGVSLMTIRKDFAQTIEKKGEAPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQTVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFASYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGDTGCVTLFFRGVTHG
>NZ_CP019405.1|WP_001541135.1|4202753_4202867_+|hypothetical-protein
MIFSPQYKTGDLTNKKTKRTFTPESAIMRKAVSTLTC
>NZ_CP019405.1|WP_076937723.1|4201454_4202135_-|hydrolase
MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARASALAKIATLCNMPVITTASVPQGPNGPLIPEIHANAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMARVVQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA
>NZ_CP019405.1|WP_076937722.1|4200807_4201287_+|hypothetical-protein
MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGEHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
>NZ_CP019405.1|WP_001082118.1|4200514_4200607_+|protein-MgtR
MNRSPDKIIALIFLLISLLVLCLALWQIVL
>NZ_CP019405.1|WP_076937721.1|4197766_4200493_+|magnesium-translocating-P-type-ATPase
MTDMNIENRKLNRPASENDKQHKKVFPIEAEAFHSPEETLARLNSHRQGLTIEEASERLKVYGRNEVAHEQVPPVLVQLLQAFNNPFIYVLMALAGVSFITDYWLPLRRGEETDLTGVLIILTMVSLSGLLRFWQEFRTNRAAQALKKMVRTTATVLRRGPGNIGAVQEEIPIEELVPGDVVFLAAGDLVPADVRLLASRDLFISQSILSGESLPVEKYDVMADVAGKDSEQLPDKDKSLLDLGNICLMGTNVTSGRAQAVVVATGSRTWFGSLAKSIVGTRTQTAFDRGVNSVSWLLIRFMLIMVPVVLLINGFSKGDWVEASLFALAVAVGLTPEMLPMIVSSNLAKGAIAMSRRKVIVKRLNAIQNFGAMDVLCTDKTGTLTQDNIFLEHHLDVSGVKSGRVLMLAWLNSSSQSGARNVMDRAILRFGEGRIAPSTKARFVKRDELPFDFVRRRVSVLVEDAQHGDRCLICKGAVEEMMMVATHLREGDRVVALTETRRELLLAKTEDYNAQGFRVLLIATRKLDGSGNNPTLSVEDETELTIEGMLTFLDPPKESAGKAIAALRDNGVAVKVLTGDNPVVTARICLEVGIDTHDILTGTQVEAMSDAELGSEVEKRAVFARLTPLQKTRILQALQRNGHTVGFLGDGINDAPALRDADVGISVDSAADIAKESSDIILLEKDLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLIQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWYVFAANNVEAQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSRATLPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPLSYFPWLVATLLSYCLVAQGMKRFYIKRFGQWF
>NZ_CP019405.1|WP_076937720.1|4196851_4197547_+|MgtC-family-protein
MEERMLMFPYILNLLAAMLLGALIGAERQWRQRMAGLRTNALVATGAAVFILSSMTTSPDSPGRIAAQIVSGIGFLGAGVIMREGMNVRGLNTAATLWCSAGIGVLCGLGQFKNALAATIIILCANILLREAAQRINQLPVSAEGKKRYILKVTCNKEDESAVRQWLLNIVKEAAICLQGLGSVPAQEQGYKEIRAELVGHADYRKTRELIISRIGDNDNITAIHWSIDSQ
>NZ_CP019405.1|WP_000535970.1|4195443_4196346_-|EamA-family-transporter
MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFAGLILVTFSFMHGDKIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALARRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRARAA
>NZ_CP019405.1|WP_000749540.1|4194459_4195401_+|Rpn-family-recombination-promoting-nuclease/putative-transposase
MKKSPTSTPHDAVFKTFLRHPDTARDFLNIHLPHSLRIRCDLTTLKLAPDSFIEKNLRAFYSDVLWSLKTCEGDGYIYVVIEHQSTPDAHMAFRLMRYATAAMQRHLDAGHKTLPLVIPMLFYHGAKSPYPFSLCWLDEFDDPALARQLYATAFPLVDITVVPDNEIMQHRRIAMLELVQKHIRQRDLMGLVERLAVLLITGNANDSQLKALFNYLLIQHGSTPRFGKFIREVARRVPQHKERLMTIVDRIRESGRRKGKREGVQQGIQQGIHQGKQEEALRIAHTMLEQGIEREMVLMITGLSDEEIKAKRH
>NZ_CP019405.1|WP_076937725.1|4207273_4207891_-|helix-turn-helix-transcriptional-regulator
MMRKPSQIIHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFTDLQWADSLANSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLKRFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL
>NZ_CP019405.1|WP_188317990.1|4208620_4208758_-|hypothetical-protein
MCKSRLTEHQNIAVIKLVEAGRAVKDICQEADISEVTDDIYGHWV
>NZ_CP019405.1|WP_000834256.1|4209895_4211278_+|glycoside-pentoside-hexuronide-family-transporter
MKSEILSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLLARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSLNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVKLIGGENKALGFQGGIAALSVVAFLMLAFCFFTTKERVEAPATHTSMREDLRDIWHNDQWRIVGLLTILNILAVCVRGGAMMYYVTWILGKPGVFVAFLTTYCVGNLIGSALAKPLTDWKCKVSVFCWTNALLAVISVAMFFVPMHATIAMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLALGGALIGWMLAGGGYDAAAKTQNSATISIIIALFTIVPAICYLLSAAIAKRYYTLKSPFLKTILEQLAQGAHRNEQEFTHKELQN
>NZ_CP019405.1|WP_000703003.1|4211289_4213608_+|alpha-xylosidase
MKISDGNWLIQPGLNLIHPVQVFDVEQHGNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGVIGVRMEHFQGALDNGPHYPLNVLQDINVEMQNNAEFAELKSGSLSVRVTKGELWSLDFLRNGVRITGSQLKNNGYVQDTNSGRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQSYKNIPFYITNRGYGVLVNHPQCVSFEIGSEKVSKVQFSVESEYLEYFVIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPVTFPDPKGMIRRLKAKGLKVCVWINPYIGQKSPVFQELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPQACEWYADKLKGLVEMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKETVGVEEAVLFARSASVGAQQFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTEQKCRMMPYLYREAARANEAGTPMMRAMMLEFPDDPACDYLDRQYMLGDAVMVAPVFSEAGDVEFYLPEGRWTHLWRNDEVQGSRWHKQQHDFLSLPVYVRDNTLLALGNNSQKPDYAWHEGTAFQLFHLDDGCEAVCEVPATDGSTIFTLQAKRTGNTITVSGEGEARNWTLCLRNITQISGTKCGSYAGSELGVVVTPQGNEVVITL
>NZ_CP019405.1|WP_000766665.1|4213710_4215420_-|AsmA-family-protein
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHVSNWVSENSGYHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVAKTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFEADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVLGNKAQIQLSAGSLTLNDVPATNVLIEGSIDHNQVMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSEFFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQGVALRQFTTRWEGGMVRTSGAWLREGKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPAFPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTGKGILEATASVSQLPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQLTASGNIQADAPLKPTVNGQLHAVNAQKQQITQTMQAGVVSGGEVTSTEPAL
>NZ_CP019405.1|WP_000115428.1|4215540_4216932_-|xanthine/proton-symporter-XanP
MSVNAIEPADAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVLSRILHLARRIITPLVSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLAIIILLNRQRNPYLRVASLVIAMAAGYLLAWFMGMLPENNAPVSQDILMVPTPLYYGLGIDWNLLLPLMLVFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPQILQFAPEWVKNLLSSGIAAGGITAIVLNLILPPEKP
>NZ_CP019405.1|WP_000462251.1|4217159_4218365_+|sodium/glutamate-symporter
MFELDTLSTLVAATLVLLLGRKLVQSVSLLKKYTIPEPVAGGLLVAVALLVLKKSVGWEVNFDMTLRDPLMLAFFATIGLNANLASLRKGGRVVGVFLVVVVGLLLMQNAIGIGMASLLGLDPLMGLIAGSITLSGGHGTGAAWSKLFVERYGFANATEVAMACATFGLVLGGLIGGPVARYLVKHSTTPDGMPDDQAVPTAFEKPDVGRMITSLVLIETIALIAICLTVGKIVAQLLAGTVLELPVFVCVLFVGVILSNGLALVGFYRVFERAVSVLGNVSLSLFLAMALMSLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPMFAG
>NZ_CP019405.1|WP_076937726.1|4218367_4219219_+|hypothetical-protein
MKKRCRQPETLRERCRHIFGDEPPVLNVWEVEFDYADAELQALAATDWRQITDWHLSVYYVLNLVYHEPMQPELFRYLFPLCLACWRETLLTHGYGDHFEESFLRALRRPYLWREMMDAAQRQQVRHFLLETMLARINHERGFNSPLTWLDTFNVLGGIAPFIRSLWNQWWLLDTPGKAVCALQYAAHLIYPVEVNPLWPEGSWQWQPPLGATEEPWLENNLAFLTRQLTPEMILDGVQKAAEMLRDEPESAMATRISRDALAAQDVIAIQIEDLLLDLSRGE
>NZ_CP019405.1|WP_076937727.1|4219221_4221303_-|ATP-dependent-DNA-helicase-RecG
MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALRAGAQRYHTQPLSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRPPVTTVAIPDTRRHEIIDRVRNACTTEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRIARHIHERYPQQAQALIERWMPETERYSNA
>NZ_CP019405.1|WP_001068433.1|4221308_4221998_-|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH
MNPKRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEDEQQRLLFEGGYPVLAKVAKRKGLPYPRVNQQGEIDADADWWATMQAAG

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Crispr_ID: NZ_CP019405_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019405_5

4709771-4709871

Orphan

Consensus_repeat	Method
GCTTCAGTGGCGAACGTCGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019405_5

>merge|NZ_CP019405|5|4709771-4709871|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAAGGCGGTCGTAATTTCAGCGGAGAACGTCGTGAAGGTGGTCGTGGCGATGGTCGTCGCTTCAGCGGCGAACGTCGTGAA

>NZ_CP019405|5|5|4709771-4709871|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAA	GGCGGTCGTAATTTCAGCGGAGAACGTCGTGAAGGTGGTCGTGGCGATGGTCGTC
GCTTCAGCGGCGAACGTCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019405.1\|WP_001031038.1\|4698300_4699803_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP019405.1\|WP_000207657.1\|4695849_4697193_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP019405.1\|WP_076937809.1\|4703127_4704072_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235333
NZ_CP019405.1\|WP_010723222.1\|4707968_4708049_+\|protein-YrbN	unknown	unknown	gnl\|CDD\|380282
NZ_CP019405.1\|WP_077905270.1\|4713960_4714857_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP019405.1\|WP_000380404.1\|4717422_4717866_+\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP019405.1\|WP_000884721.1\|4716059_4716584_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP019405.1\|WP_000133064.1\|4699827_4702506_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP019405.1\|WP_000802069.1\|4706978_4707863_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NZ_CP019405.1\|WP_001670767.1\|4704733_4706869_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP019405.1\|WP_076937810.1\|4712775_4713783_-\|luciferase-like-monooxygenase	unknown	unknown	gnl\|CDD\|182505
NZ_CP019405.1\|WP_001294028.1\|4711389_4711920_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019405.1\|WP_076935700.1\|4710084_4711329_+\|tryptophan-permease	unknown	unknown	gnl\|CDD\|182492
NZ_CP019405.1\|WP_000105461.1\|4697820_4698273_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP019405.1\|WP_000532745.1\|4712078_4712798_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP019405.1\|WP_000421309.1\|4714847_4715843_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP019405.1\|WP_001040208.1\|4702726_4703128_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP019405.1\|WP_000908562.1\|4716577_4717081_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP019405.1\|WP_000059465.1\|4704222_4704492_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP019405.1\|WP_000928379.1\|4717067_4717385_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979

Protein	Function_ID	Function_description	E-value
NZ_CP019405.1\|WP_001031038.1\|4698300_4699803_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP019405.1\|WP_000207657.1\|4695849_4697193_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP019405.1\|WP_076937809.1\|4703127_4704072_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235333	PRK05033, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP019405.1\|WP_010723222.1\|4707968_4708049_+\|protein-YrbN	gnl\|CDD\|380282	NF033440, small_YrbN, protein YrbN. YrbN, a small protein of only 26 amino acids, is found in at least these genera: Escherichia, Salmonella, Enterobacter, Klebsiella, and Yersinia. It is known to be expressed in E. coli.	1.66225e-08
NZ_CP019405.1\|WP_077905270.1\|4713960_4714857_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP019405.1\|WP_000380404.1\|4717422_4717866_+\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	1.36854e-99
NZ_CP019405.1\|WP_000884721.1\|4716059_4716584_+\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	1.82299e-84
NZ_CP019405.1\|WP_000133064.1\|4699827_4702506_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP019405.1\|WP_000802069.1\|4706978_4707863_+\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	0
NZ_CP019405.1\|WP_001670767.1\|4704733_4706869_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP019405.1\|WP_076937810.1\|4712775_4713783_-\|luciferase-like-monooxygenase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP019405.1\|WP_000532745.1\|4712078_4712798_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.17265e-108
NZ_CP019405.1\|WP_076935700.1\|4710084_4711329_+\|tryptophan-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	0
NZ_CP019405.1\|WP_000105461.1\|4697820_4698273_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	4.39218e-79
NZ_CP019405.1\|WP_000421309.1\|4714847_4715843_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	3.77757e-116
NZ_CP019405.1\|WP_001040208.1\|4702726_4703128_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.271e-52
NZ_CP019405.1\|WP_000908562.1\|4716577_4717081_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	7.2703e-63
NZ_CP019405.1\|WP_000059465.1\|4704222_4704492_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	7.70279e-54
NZ_CP019405.1\|WP_000928379.1\|4717067_4717385_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	4.3214e-44

>NZ_CP019405.1|WP_010723222.1|4707968_4708049_+|protein-YrbN
MKIADQFHDELCRLAAINFEAHVLHG
>NZ_CP019405.1|WP_000802069.1|4706978_4707863_+|lipoprotein-NlpI
MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPYRSLWLYLVEQKLNEKQAKEALKARFEKSDKEQWGWNIVEFYLGDISEATLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ
>NZ_CP019405.1|WP_001670767.1|4704733_4706869_+|polyribonucleotide-nucleotidyltransferase
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
>NZ_CP019405.1|WP_000059465.1|4704222_4704492_+|30S-ribosomal-protein-S15
MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR
>NZ_CP019405.1|WP_076937809.1|4703127_4704072_+|tRNA-pseudouridine(55)-synthase-TruB
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQLIDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDEGRVAPRRLVVEYPA
>NZ_CP019405.1|WP_001040208.1|4702726_4703128_+|30S-ribosome-binding-factor-RbfA
MAKEFGRPQRVAQEMQKEIALILQREIKDPRVGMMTTVSGVEMSRDLAYAKVFVTFLNDQDEAAVKNGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED
>NZ_CP019405.1|WP_000133064.1|4699827_4702506_+|translation-initiation-factor-IF-2
MTDVTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVSNQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA
>NZ_CP019405.1|WP_001031038.1|4698300_4699803_+|transcription-termination/antitermination-protein-NusA
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMAGNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMAFKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA
>NZ_CP019405.1|WP_000105461.1|4697820_4698273_+|ribosome-maturation-factor-RimP
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>NZ_CP019405.1|WP_000207657.1|4695849_4697193_-|argininosuccinate-synthase
MTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDESVKIPAEVVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHSHGRQLGKLLYQGRWFDSQALMLRDGLQRWVASQITGEVTLELRRGNDYSILNTVSDNLTYKPERLTMEKGDSVFSPDDRIGQLTMRNLDITDTREKLFGYAKAGLLTASSATGLPQVENLENKGK
>NZ_CP019405.1|WP_076935700.1|4710084_4711329_+|tryptophan-permease
MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFAFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESHASYTPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALALYSVWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRFKTALLTFVPPIVGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKSRERFGSPKFRVWGGKPMIVLILLFGVGNALVHILSSFNLLPVYQ
>NZ_CP019405.1|WP_001294028.1|4711389_4711920_-|hypothetical-protein
MSEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCNSGESEKNIYAEHINFNKETQIVTMDHIFLSESYEMFMPLMACVRGIEKFITPGENNFALIYYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDEHGEALAEELYNKQGFI
>NZ_CP019405.1|WP_000532745.1|4712078_4712798_+|murein-L,D-transpeptidase
MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTTLP
>NZ_CP019405.1|WP_076937810.1|4712775_4713783_-|luciferase-like-monooxygenase
MTDKTIPFSVLDLAPIPEGSSAKEAFTHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLVANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQPTMRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEQIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRTQFKPSARLAKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIENLETFWSPSEQYGVQQALSMSLVGDKAKVRHGLVSILRETQADEIMVNGQIFDHQARLHSFDLAMDVKEELLG
>NZ_CP019405.1|WP_077905270.1|4713960_4714857_-|U32-family-peptidase
MAVRGAMKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVALSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVFSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGLVDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
>NZ_CP019405.1|WP_000421309.1|4714847_4715843_-|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKAAPQNFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP019405.1|WP_000884721.1|4716059_4716584_+|SCP2-domain-containing-protein
MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC
>NZ_CP019405.1|WP_000908562.1|4716577_4717081_+|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQVHRLAEDALEGVTGLVEYHDHFNRF
>NZ_CP019405.1|WP_000928379.1|4717067_4717385_-|GIY-YIG-nuclease-family-protein
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
>NZ_CP019405.1|WP_000380404.1|4717422_4717866_+|YhbP-family-protein
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	MW013502	Salmonella virus L cI-40 13-am43, complete genome	31672-31713	0	1.0
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	NC_004348	Enterobacteria phage ST64T, complete genome	14874-14915	0	1.0
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	MW013503	Salmonella virus L cII-101, complete genome	31673-31714	0	1.0
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	14874-14915	0	1.0
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	MF188997	Salmonella phage vB_SalP_PM43, complete genome	14769-14810	0	1.0
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	NZ_CP045723	Pantoea eucalypti strain LMG 24197 plasmid unnamed3, complete sequence	14460-14491	2	0.938
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	NC_011802	Salmonella enterica bacteriophage SE1, complete genome	15034-15075	2	0.952
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	CP051278	Salmonella phage ST-87, complete genome	25843-25884	2	0.952
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	CP051288	Salmonella phage ST-29, complete genome	38685-38726	2	0.952
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	CP051285	Salmonella phage ST-32, complete genome	31779-31820	2	0.952
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	NC_014900	Salmonella phage ST160, complete genome	15102-15143	2	0.952
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	CP051272	Salmonella phage SW-70, complete genome	35832-35873	2	0.952
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	NC_005262	Burkholderia cepacia phage Bcep22, complete genome	14066-14097	3	0.906
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	NZ_CP009882	Pantoea sp. PSNIH1 plasmid pPSP-26e, complete sequence	66816-66847	3	0.906
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	MN855721	Myoviridae sp. isolate 53, complete genome	26418-26449	4	0.875
NZ_CP019405_2	2.1\|323815\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323815-323846	32	NC_014213	Meiothermus silvanus DSM 9946 plasmid pMESIL01, complete sequence	164416-164447	6	0.812
NZ_CP019405_2	2.2\|323876\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323876-323907	32	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	318089-318120	6	0.812
NZ_CP019405_2	2.2\|323876\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323876-323907	32	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	246347-246378	6	0.812
NZ_CP019405_2	2.2\|323876\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323876-323907	32	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	408332-408363	6	0.812
NZ_CP019405_2	2.2\|323876\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323876-323907	32	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	411179-411210	6	0.812
NZ_CP019405_2	2.2\|323876\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323876-323907	32	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	393790-393821	6	0.812
NZ_CP019405_2	2.2\|323876\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323876-323907	32	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	393790-393821	6	0.812
NZ_CP019405_2	2.2\|323876\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323876-323907	32	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	348603-348634	6	0.812
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	NZ_CP042508	Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence	12228-12259	6	0.812
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	NZ_CP040893	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_2, complete sequence	56941-56972	6	0.812
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	NC_016160	Escherichia phage HK75, complete genome	28592-28633	6	0.857
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	NC_019705	Enterobacteria phage mEpX2, complete genome	29046-29087	6	0.857
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	KY979108	Escherichia phage ECP1, complete genome	427-468	6	0.857
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	NC_019719	Enterobacteria phage HK633, complete genome	31740-31781	6	0.857
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	JF974339	Enterobacteria phage IME10, complete genome	9723-9764	6	0.857
NZ_CP019405_3	3.1\|808594\|42\|NZ_CP019405\|CRISPRCasFinder	808594-808635	42	NC_005344	Enterobacteria phage Sf6, complete genome	28410-28451	6	0.857
NZ_CP019405_2	2.1\|323815\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323815-323846	32	NZ_CP014061	Pseudomonas monteilii strain FDAARGOS_171 plasmid unnamed, complete sequence	25756-25787	7	0.781
NZ_CP019405_2	2.4\|323998\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323998-324029	32	NZ_CP048421	Sphingomonas insulae strain KCTC 12872 plasmid unnamed3, complete sequence	118874-118905	7	0.781
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1655546-1655577	8	0.75
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1565948-1565979	8	0.75
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1565949-1565980	8	0.75
NZ_CP019405_2	2.7\|324181\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324181-324212	32	NZ_LR134459	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence	168095-168126	8	0.75
NZ_CP019405_2	2.7\|324181\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324181-324212	32	NC_008759	Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence	96851-96882	8	0.75
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	343177-343208	8	0.75
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	NZ_CP049032	Fluviibacterium aquatile strain SC52 plasmid pSC52_4, complete sequence	56168-56199	8	0.75
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	NZ_CP020695	Sulfitobacter sp. D7 plasmid p1SUD7, complete sequence	28118-28149	8	0.75
NZ_CP019405_2	2.18\|324871\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	324871-324902	32	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1831742-1831773	8	0.75
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1578348-1578379	9	0.719
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1496565-1496596	9	0.719
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1568471-1568502	9	0.719
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1495587-1495618	9	0.719
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1496557-1496588	9	0.719
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1495910-1495941	9	0.719
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1496547-1496578	9	0.719
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1578515-1578546	9	0.719
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1578498-1578529	9	0.719
NZ_CP019405_1	1.10\|307566\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	307566-307597	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1578478-1578509	9	0.719
NZ_CP019405_2	2.1\|323815\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323815-323846	32	KF787095	Achromobacter phage JWAlpha, complete genome	3464-3495	9	0.719
NZ_CP019405_2	2.1\|323815\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323815-323846	32	KF787094	Achromobacter phage JWDelta, complete genome	3506-3537	9	0.719
NZ_CP019405_2	2.1\|323815\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323815-323846	32	MT457552	Shewanella phage Thanatos-1, complete genome	91946-91977	9	0.719
NZ_CP019405_2	2.3\|323937\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323937-323968	32	MN692954	Marine virus AFVG_117M44, complete genome	24265-24296	9	0.719
NZ_CP019405_2	2.5\|324059\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324059-324090	32	MN369757	Streptomyces phage Bordeaux, complete genome	76801-76832	9	0.719
NZ_CP019405_2	2.5\|324059\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324059-324090	32	MN484599	Streptomyces phage Wipeout, complete genome	77017-77048	9	0.719
NZ_CP019405_2	2.5\|324059\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324059-324090	32	MH590599	Streptomyces phage Karimac, complete genome	76910-76941	9	0.719
NZ_CP019405_2	2.5\|324059\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324059-324090	32	MN428060	Streptomyces phage IchabodCrane, complete genome	76373-76404	9	0.719
NZ_CP019405_2	2.5\|324059\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324059-324090	32	NC_048721	Streptomyces phage StarPlatinum, complete genome	77545-77576	9	0.719
NZ_CP019405_2	2.5\|324059\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324059-324090	32	MK801722	Streptomyces phage Birchlyn, complete genome	74532-74563	9	0.719
NZ_CP019405_2	2.5\|324059\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324059-324090	32	MH590597	Streptomyces phage LukeCage, complete genome	76667-76698	9	0.719
NZ_CP019405_2	2.5\|324059\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324059-324090	32	MN369750	Streptomyces phage TomSawyer, complete genome	76693-76724	9	0.719
NZ_CP019405_2	2.5\|324059\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324059-324090	32	MH576964	Streptomyces phage Starbow, complete genome	76648-76679	9	0.719
NZ_CP019405_2	2.7\|324181\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324181-324212	32	NZ_CP027240	Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed2, complete sequence	45794-45825	9	0.719
NZ_CP019405_2	2.7\|324181\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324181-324212	32	NZ_CP025617	Micrococcus luteus strain SGAir0127 plasmid pSGAir0127	15486-15517	9	0.719
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	MN693013	Marine virus AFVG_117M80, complete genome	6645-6676	9	0.719
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	MN693031	Marine virus AFVG_117M81, complete genome	6550-6581	9	0.719
NZ_CP019405_2	2.18\|324871\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	324871-324902	32	MK962626	Achromobacter phage vB_AxyP_19-32_Axy04, complete genome	43938-43969	9	0.719
NZ_CP019405_2	2.18\|324871\|32\|NZ_CP019405\|CRISPRCasFinder,CRT	324871-324902	32	KT321317	Achromobacter phage phiAxp-3, complete genome	43460-43491	9	0.719
NZ_CP019405_1	1.3\|307138\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	307138-307169	32	MK482690	Escherichia phage vB_EcoM_LMP34, partial genome	9521-9552	10	0.688
NZ_CP019405_1	1.3\|307138\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	307138-307169	32	MK482689	Escherichia phage vB_EcoM_LMP33, complete genome	68795-68826	10	0.688
NZ_CP019405_1	1.3\|307138\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	307138-307169	32	MK482688	Escherichia phage vB_EcoM_LMP25, complete genome	84709-84740	10	0.688
NZ_CP019405_1	1.3\|307138\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	307138-307169	32	KT184316	Enterobacteria phage XTG1, complete genome	83623-83654	10	0.688
NZ_CP019405_2	2.4\|323998\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	323998-324029	32	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	415868-415899	10	0.688
NZ_CP019405_2	2.7\|324181\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324181-324212	32	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	137765-137796	10	0.688
NZ_CP019405_2	2.9\|324303\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324303-324334	32	AP013386	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51	33355-33386	10	0.688
NZ_CP019405_2	2.9\|324303\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324303-324334	32	GU943014	Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence	17161-17192	10	0.688
NZ_CP019405_2	2.9\|324303\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324303-324334	32	AP014420	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, * SEQUENCING IN PROGRESS *, 5 ordered pieces	1562-1593	10	0.688
NZ_CP019405_2	2.9\|324303\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324303-324334	32	GU943017	Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence	8843-8874	10	0.688
NZ_CP019405_2	2.9\|324303\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324303-324334	32	AP014417	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, * SEQUENCING IN PROGRESS *, 5 ordered pieces	32057-32088	10	0.688
NZ_CP019405_2	2.9\|324303\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324303-324334	32	GU943022	Uncultured phage MedDCM-OCT-S04-C890 genomic sequence	8806-8837	10	0.688
NZ_CP019405_2	2.9\|324303\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324303-324334	32	GU943013	Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence	10844-10875	10	0.688
NZ_CP019405_2	2.9\|324303\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324303-324334	32	AP014416	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, * SEQUENCING IN PROGRESS *, 4 ordered pieces	9238-9269	10	0.688
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	59535-59566	10	0.688
NZ_CP019405_2	2.12\|324487\|32\|NZ_CP019405\|PILER-CR,CRISPRCasFinder,CRT	324487-324518	32	NZ_CP054030	Rhizobium sp. JKLM19E plasmid pPR19E03	65633-65664	10	0.688

1. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

2. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

3. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

4. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

5. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

6. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045723 (Pantoea eucalypti strain LMG 24197 plasmid unnamed3, complete sequence) position: , mismatch: 2, identity: 0.938

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
acacggcggcggcgttgggccactccgaagta	Protospacer
**************.*************** *

7. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to NC_011802 (Salmonella enterica bacteriophage SE1, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

8. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to CP051278 (Salmonella phage ST-87, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

9. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to CP051288 (Salmonella phage ST-29, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

10. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to CP051285 (Salmonella phage ST-32, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

11. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to NC_014900 (Salmonella phage ST160, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

12. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to CP051272 (Salmonella phage SW-70, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

13. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NC_005262 (Burkholderia cepacia phage Bcep22, complete genome) position: , mismatch: 3, identity: 0.906

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
acacggcggcggcgttgggccactccgaaata	Protospacer
**************.**************. *

14. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009882 (Pantoea sp. PSNIH1 plasmid pPSP-26e, complete sequence) position: , mismatch: 3, identity: 0.906

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
atacgacggcggcgttgggccactccgaagaa	Protospacer
*.***.********.*****************

15. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MN855721 (Myoviridae sp. isolate 53, complete genome) position: , mismatch: 4, identity: 0.875

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
acacggcggcgtcgctgggccactccatagta	Protospacer
*********** **************. ** *

16. spacer 2.1|323815|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NC_014213 (Meiothermus silvanus DSM 9946 plasmid pMESIL01, complete sequence) position: , mismatch: 6, identity: 0.812

--ctggccgcacaggaagtagccgaaaaggtggt	CRISPR spacer
gtcgggcag--caggaagtggccgaaaagctggt	Protospacer
  * *** *  ********.********* ****

17. spacer 2.2|323876|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcagcgagaaacgcacgccgacacactcgca	CRISPR spacer
gtcagcgggaaacgcccgccgacacttttgcc	Protospacer
*******.******* ********* .*.**

18. spacer 2.2|323876|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 6, identity: 0.812

gtcagcgagaaacgcacgccgacacactcgca	CRISPR spacer
gtcagcgggaaacgcccgccgacacttttgcc	Protospacer
*******.******* ********* .*.**

19. spacer 2.2|323876|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcagcgagaaacgcacgccgacacactcgca	CRISPR spacer
gtcagcgggaaacgcccgccgacacttttgcc	Protospacer
*******.******* ********* .*.**

20. spacer 2.2|323876|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 6, identity: 0.812

gtcagcgagaaacgcacgccgacacactcgca	CRISPR spacer
gtcagcgggaaacgcccgccgacacttttgcc	Protospacer
*******.******* ********* .*.**

21. spacer 2.2|323876|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcagcgagaaacgcacgccgacacactcgca	CRISPR spacer
gtcagcgggaaacgcccgccgacacttttgcc	Protospacer
*******.******* ********* .*.**

22. spacer 2.2|323876|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 6, identity: 0.812

gtcagcgagaaacgcacgccgacacactcgca	CRISPR spacer
gtcagcgggaaacgcccgccgacacttttgcc	Protospacer
*******.******* ********* .*.**

23. spacer 2.2|323876|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 6, identity: 0.812

gtcagcgagaaacgcacgccgacacactcgca	CRISPR spacer
gtcagcgggaaacgcccgccgacacttttgcc	Protospacer
*******.******* ********* .*.**

24. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042508 (Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence) position: , mismatch: 6, identity: 0.812

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
caacggcggcgtcgttgggccactccgaagtg	Protospacer
  ********* **.*************** .

25. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040893 (Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_2, complete sequence) position: , mismatch: 6, identity: 0.812

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
caacggcggcgtcgttgggccactccgaagtg	Protospacer
  ********* **.*************** .

26. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to NC_016160 (Escherichia phage HK75, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

27. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to NC_019705 (Enterobacteria phage mEpX2, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

28. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to KY979108 (Escherichia phage ECP1, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

29. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to NC_019719 (Enterobacteria phage HK633, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

30. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

31. spacer 3.1|808594|42|NZ_CP019405|CRISPRCasFinder matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

32. spacer 2.1|323815|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014061 (Pseudomonas monteilii strain FDAARGOS_171 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ctggccgcacaggaagtagccgaaaaggtggt	CRISPR spacer
ctggccgcactggatgtagccgaaaccggttt	Protospacer
********** *** **********  *   *

33. spacer 2.4|323998|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048421 (Sphingomonas insulae strain KCTC 12872 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

cggacgtgttcgccattctctcgcgtgctgag	CRISPR spacer
cggacgtgttcgccatgatctcgaaggccgac	Protospacer
****************  ***** . **.**

34. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.75

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
ccagagcggcaaatggatttcgacgacctacg	Protospacer
*  ***.******* ***********   **

35. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
ccagagcggcaaatggatttcgacgacctacg	Protospacer
*  ***.******* ***********   **

36. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
ccagagcggcaaatggatttcgacgacctacg	Protospacer
*  ***.******* ***********   **

37. spacer 2.7|324181|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 8, identity: 0.75

ttcagcgccgtgcctgcggtgcagttcgttgc	CRISPR spacer
gtcgacgccgtggctgcggtgcaggtcggcga	Protospacer
 **..******* *********** *** .*

38. spacer 2.7|324181|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NC_008759 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence) position: , mismatch: 8, identity: 0.75

ttcagcg--ccgtgcctgcggtgcagttcgttgc	CRISPR spacer
--cagcgccccgtgcctgcgatgcagttcccgtt	Protospacer
  *****  ***********.******** .  .

39. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 8, identity: 0.75

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
gaggcgaggccgcgctgggccactccgacgaa	Protospacer
. .  * *** ***************** ***

40. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049032 (Fluviibacterium aquatile strain SC52 plasmid pSC52_4, complete sequence) position: , mismatch: 8, identity: 0.75

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
tcacccgggcggcgctggcccaccccgaagcc	Protospacer
 ***   *********** ****.******

41. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020695 (Sulfitobacter sp. D7 plasmid p1SUD7, complete sequence) position: , mismatch: 8, identity: 0.75

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
agacggcggcggagctgggccattcggcggcg	Protospacer
* ********** *********.** * .* .

42. spacer 2.18|324871|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 8, identity: 0.75

ccgctttgctggcaacattcaccacatagccc	CRISPR spacer
gttcggtgccggcaacattcaccacatagctg	Protospacer
 . *  ***.********************.

43. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

44. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

45. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

46. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

47. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

48. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

49. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

50. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

51. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

52. spacer 1.10|307566|32|NZ_CP019405|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

53. spacer 2.1|323815|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to KF787095 (Achromobacter phage JWAlpha, complete genome) position: , mismatch: 9, identity: 0.719

ctggccgcacaggaagtagccgaaaaggtggt	CRISPR spacer
ctggccgcacaggccgtagccgatgccatgac	Protospacer
*************  ******** .  .**..

54. spacer 2.1|323815|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to KF787094 (Achromobacter phage JWDelta, complete genome) position: , mismatch: 9, identity: 0.719

ctggccgcacaggaagtagccgaaaaggtggt	CRISPR spacer
ctggccgcacaggccgtagccgatgccatgac	Protospacer
*************  ******** .  .**..

55. spacer 2.1|323815|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MT457552 (Shewanella phage Thanatos-1, complete genome) position: , mismatch: 9, identity: 0.719

ctggccgcacaggaagtagccgaaaaggtggt	CRISPR spacer
tttgataatcaggaagtagccaaaaagatggt	Protospacer
.* * ..  ************.*****.****

56. spacer 2.3|323937|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MN692954 (Marine virus AFVG_117M44, complete genome) position: , mismatch: 9, identity: 0.719

ggctaatggttatagatatccatgcggggaaa	CRISPR spacer
tcgcaatggaaatagatatccatgcggaagaa	Protospacer
   .*****  ****************...**

57. spacer 2.5|324059|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MN369757 (Streptomyces phage Bordeaux, complete genome) position: , mismatch: 9, identity: 0.719

ggaatggcatttctatcccttcggctgatttt	CRISPR spacer
atagagccatttcgatcccttcggttgattac	Protospacer
. *. * ****** **********.***** .

58. spacer 2.5|324059|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MN484599 (Streptomyces phage Wipeout, complete genome) position: , mismatch: 9, identity: 0.719

ggaatggcatttctatcccttcggctgatttt	CRISPR spacer
atagagccatttcgatcccttcggttgattac	Protospacer
. *. * ****** **********.***** .

59. spacer 2.5|324059|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MH590599 (Streptomyces phage Karimac, complete genome) position: , mismatch: 9, identity: 0.719

ggaatggcatttctatcccttcggctgatttt	CRISPR spacer
atagagccatttcgatcccttcggttgattac	Protospacer
. *. * ****** **********.***** .

60. spacer 2.5|324059|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MN428060 (Streptomyces phage IchabodCrane, complete genome) position: , mismatch: 9, identity: 0.719

ggaatggcatttctatcccttcggctgatttt	CRISPR spacer
atagagccatttcgatcccttcggttgattac	Protospacer
. *. * ****** **********.***** .

61. spacer 2.5|324059|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NC_048721 (Streptomyces phage StarPlatinum, complete genome) position: , mismatch: 9, identity: 0.719

ggaatggcatttctatcccttcggctgatttt	CRISPR spacer
acagagccatttctgtcccttcggttgattac	Protospacer
. *. * *******.*********.***** .

62. spacer 2.5|324059|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MK801722 (Streptomyces phage Birchlyn, complete genome) position: , mismatch: 9, identity: 0.719

ggaatggcatttctatcccttcggctgatttt	CRISPR spacer
atagagccatttcgatcccttcggttgattac	Protospacer
. *. * ****** **********.***** .

63. spacer 2.5|324059|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MH590597 (Streptomyces phage LukeCage, complete genome) position: , mismatch: 9, identity: 0.719

ggaatggcatttctatcccttcggctgatttt	CRISPR spacer
atagagccatctctatcccttcggttgattac	Protospacer
. *. * ***.*************.***** .

64. spacer 2.5|324059|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MN369750 (Streptomyces phage TomSawyer, complete genome) position: , mismatch: 9, identity: 0.719

ggaatggcatttctatcccttcggctgatttt	CRISPR spacer
atagagccatttcgatcccttcggttgattac	Protospacer
. *. * ****** **********.***** .

65. spacer 2.5|324059|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MH576964 (Streptomyces phage Starbow, complete genome) position: , mismatch: 9, identity: 0.719

ggaatggcatttctatcccttcggctgatttt	CRISPR spacer
atagagccatttcgatcccttcggttgattac	Protospacer
. *. * ****** **********.***** .

66. spacer 2.7|324181|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027240 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttcagcgccgtgcctgcggtgcagttcgttgc	CRISPR spacer
gccagcgccgggcctgcggtgccgtcagtccg	Protospacer
 .******** *********** **. **.

67. spacer 2.7|324181|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025617 (Micrococcus luteus strain SGAir0127 plasmid pSGAir0127) position: , mismatch: 9, identity: 0.719

ttcagcgccgtgcctgcggtgcagttcgttgc	CRISPR spacer
gccagcgccgggcctgcggtgccgtcagtccg	Protospacer
 .******** *********** **. **.

68. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MN693013 (Marine virus AFVG_117M80, complete genome) position: , mismatch: 9, identity: 0.719

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
atccttcgccggcgctggggcactccgaaatg	Protospacer
*. *  ** ********** *********. .

69. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MN693031 (Marine virus AFVG_117M81, complete genome) position: , mismatch: 9, identity: 0.719

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
atccttcgccggcgctggggcactccgaaatg	Protospacer
*. *  ** ********** *********. .

70. spacer 2.18|324871|32|NZ_CP019405|CRISPRCasFinder,CRT matches to MK962626 (Achromobacter phage vB_AxyP_19-32_Axy04, complete genome) position: , mismatch: 9, identity: 0.719

ccgctttgctggcaacattcaccacatagccc	CRISPR spacer
caggagcagtggcagcattcaccacattgccc	Protospacer
* *   .. *****.************ ****

71. spacer 2.18|324871|32|NZ_CP019405|CRISPRCasFinder,CRT matches to KT321317 (Achromobacter phage phiAxp-3, complete genome) position: , mismatch: 9, identity: 0.719

ccgctttgctggcaacattcaccacatagccc	CRISPR spacer
caggagcagtggcagcattcaccacattgccc	Protospacer
* *   .. *****.************ ****

72. spacer 1.3|307138|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MK482690 (Escherichia phage vB_EcoM_LMP34, partial genome) position: , mismatch: 10, identity: 0.688

aggctttgacaatggcctggttaagttggagt	CRISPR spacer
gtctgtgaacaatggcctgtttaagtttgaga	Protospacer
.  . * .*********** ******* ***

73. spacer 1.3|307138|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MK482689 (Escherichia phage vB_EcoM_LMP33, complete genome) position: , mismatch: 10, identity: 0.688

aggctttgacaatggcctggttaagttggagt	CRISPR spacer
gtctgtgaacaatggcctgtttaagtttgaga	Protospacer
.  . * .*********** ******* ***

74. spacer 1.3|307138|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to MK482688 (Escherichia phage vB_EcoM_LMP25, complete genome) position: , mismatch: 10, identity: 0.688

aggctttgacaatggcctggttaagttggagt	CRISPR spacer
gtctgtgaacaatggcctgtttaagtttgaga	Protospacer
.  . * .*********** ******* ***

75. spacer 1.3|307138|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to KT184316 (Enterobacteria phage XTG1, complete genome) position: , mismatch: 10, identity: 0.688

aggctttgacaatggcctggttaagttggagt	CRISPR spacer
gtctgtgaacaatggcctgtttaagtttgaga	Protospacer
.  . * .*********** ******* ***

76. spacer 2.4|323998|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 10, identity: 0.688

cggacgtgttcgccattctctcgcgtgctgag	CRISPR spacer
gggacgagttcgccgttctctcgctctcctgc	Protospacer
 ***** *******.********* . *. .

77. spacer 2.7|324181|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

ttcagcgccgtgcctgcggtgcagttcgttgc	CRISPR spacer
gtggtcgccgtggcttcggtgcagttcggctt	Protospacer
 * . ******* ** ************ . .

78. spacer 2.9|324303|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to AP013386 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51) position: , mismatch: 10, identity: 0.688

ggataacaattacataacaggtgtgacagacg	CRISPR spacer
aacctgcaattacataacagatgttacagata	Protospacer
.. . .**************.*** *****..

79. spacer 2.9|324303|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to GU943014 (Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence) position: , mismatch: 10, identity: 0.688

ggataacaattacataacaggtgtgacagacg	CRISPR spacer
aacctgcaattacataacagatgttacagata	Protospacer
.. . .**************.*** *****..

80. spacer 2.9|324303|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to AP014420 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 10, identity: 0.688

ggataacaattacataacaggtgtgacagacg	CRISPR spacer
aacctgcaattacataacagatgttacagata	Protospacer
.. . .**************.*** *****..

81. spacer 2.9|324303|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to GU943017 (Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence) position: , mismatch: 10, identity: 0.688

ggataacaattacataacaggtgtgacagacg	CRISPR spacer
aacctgcaattacataacagatgttacagata	Protospacer
.. . .**************.*** *****..

82. spacer 2.9|324303|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to AP014417 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 10, identity: 0.688

ggataacaattacataacaggtgtgacagacg	CRISPR spacer
aacctgcaattacataacagatgttacagata	Protospacer
.. . .**************.*** *****..

83. spacer 2.9|324303|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to GU943022 (Uncultured phage MedDCM-OCT-S04-C890 genomic sequence) position: , mismatch: 10, identity: 0.688

ggataacaattacataacaggtgtgacagacg	CRISPR spacer
aacctgcaattacataacagatgttacagata	Protospacer
.. . .**************.*** *****..

84. spacer 2.9|324303|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to GU943013 (Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence) position: , mismatch: 10, identity: 0.688

ggataacaattacataacaggtgtgacagacg	CRISPR spacer
aacctgcaattacataacagatgttacagata	Protospacer
.. . .**************.*** *****..

85. spacer 2.9|324303|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to AP014416 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 10, identity: 0.688

ggataacaattacataacaggtgtgacagacg	CRISPR spacer
aacctgcaattacataacagatgttacagata	Protospacer
.. . .**************.*** *****..

86. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 10, identity: 0.688

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
gagcggccgcggcgctgggccactgcgccatt	Protospacer
. .**** **************** **  .

87. spacer 2.12|324487|32|NZ_CP019405|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054030 (Rhizobium sp. JKLM19E plasmid pPR19E03) position: , mismatch: 10, identity: 0.688

acacggcggcggcgctgggccactccgaagaa	CRISPR spacer
ctccggcggctgcgcagggccactccacccac	Protospacer
 . ******* **** **********.   *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2319 : 25498

Escherichia_phage(66.67%)

holin,plate,tRNA,terminase,lysis,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076936847.1\|2319_3063_+\|terminase	terminase endonuclease subunit	A0A0F7LBP7	Escherichia_phage	7.3e-123	97.6
WP_000846409.1\|3670_3874_+\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_000123123.1\|3877_4159_+\|holin	phage holin family protein	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
WP_001144101.1\|4158_4656_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_076936848.1\|5082_5508_+\|lysis	LysB family phage lysis regulatory protein	Q7Y4E2	Escherichia_virus	1.0e-65	95.7
WP_000917179.1\|5615_6083_+\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	3.0e-82	100.0
WP_032230352.1\|6075_6528_+	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	1.8e-76	99.3
WP_076936849.1\|6594_7236_+\|plate	phage baseplate assembly protein V	A0A0F7LBP2	Escherichia_phage	1.0e-96	89.8
WP_000127163.1\|7232_7580_+	GPW/gp25 family protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_076936850.1\|7584_8493_+\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	3.7e-161	99.3
WP_076936851.1\|8485_9097_+\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.1e-116	99.5
WP_076936852.1\|9093_10380_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	9.2e-182	70.3
WP_021530855.1\|10379_10982_+\|tail	tail fiber assembly protein	K7P870	Enterobacteria_phage	8.3e-93	86.9
WP_021530854.1\|10953_11391_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	4.8e-50	64.8
WP_076936853.1\|11393_11804_-	hypothetical protein	F1BUP1	Erwinia_phage	7.3e-08	51.6
WP_076936854.1\|11831_12425_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	3.9e-103	96.4
WP_076936855.1\|12484_13675_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.4e-224	99.5
WP_001251405.1\|13687_14206_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	5.5e-93	99.4
WP_001031303.1\|14262_14538_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_000785970.1\|14570_14690_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_076936856.1\|14682_17130_+\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	95.1
WP_001774113.1\|17144_17624_+\|tail	phage tail protein	A0A0F7LBX3	Escherichia_phage	1.9e-84	98.7
WP_076936857.1\|17623_18790_+	phage late control D family protein	U5N3V4	Enterobacteria_phage	5.8e-199	96.4
WP_023135249.1\|18856_19075_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	4.3e-39	100.0
WP_000237776.1\|19433_19940_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_001519776.1\|20063_21911_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_039589272.1\|22060_23806_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.4e-71	38.2
WP_001144069.1\|24041_24257_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_001264389.1\|24484_25498_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.2e-109	59.5

DBSCAN-SWA_2

795974 : 840471

Salmonella_phage(53.85%)

holin,integrase,terminase,portal,lysis,coat,protease,tail

attL 818134:818150|attR 839498:839514

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076937030.1\|795974_796913_+\|protease	omptin family outer membrane protease PgtE	NA	NA	NA	NA
WP_001208732.1\|797174_797378_-	hypothetical protein	C6ZR24	Salmonella_phage	2.7e-32	97.0
WP_076937032.1\|797474_797825_-	hypothetical protein	A0A192Y649	Salmonella_phage	7.0e-60	98.3
WP_188317994.1\|797895_798711_-	ead/Ea22-like family protein	A0A0P0ZD75	Stx2-converting_phage	2.3e-45	57.2
WP_076937033.1\|798707_799298_-	Eae-like protein	Q5G8U6	Enterobacteria_phage	3.6e-64	67.8
WP_001214770.1\|799294_799465_-	DUF2737 family protein	I6S642	Salmonella_phage	6.1e-25	100.0
WP_076937035.1\|799475_799769_-	DUF2856 family protein	A0A192Y654	Salmonella_phage	4.1e-45	90.7
WP_078056620.1\|799836_800334_-	HNH endonuclease	A0A192Y847	Salmonella_phage	1.5e-92	99.4
WP_076937036.1\|800396_800867_-	single-stranded DNA-binding protein	A0A192Y5Y5	Salmonella_phage	6.1e-59	100.0
WP_076937038.1\|800867_801575_-	recombinase	Q76H40	Enterobacteria_phage	2.9e-137	97.9
WP_000902089.1\|801571_801715_-	hypothetical protein	A0A1R3Y5R4	Salmonella_virus	1.6e-18	95.7
WP_076937039.1\|801704_801893_-	DUF5444 family protein	I6S647	Salmonella_phage	6.9e-30	95.2
WP_024147252.1\|801873_802032_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q76H38	Enterobacteria_phage	1.2e-22	98.1
WP_076937040.1\|802116_802431_-	superinfection exclusion protein	E7C9Q4	Salmonella_phage	1.6e-55	99.0
WP_179127213.1\|802580_802739_-	hypothetical protein	K7PMD4	Enterobacterial_phage	2.9e-21	98.1
WP_000713611.1\|802738_803026_-	hypothetical protein	Q76H36	Enterobacteria_phage	7.8e-49	98.9
WP_076937041.1\|803059_803560_-	HNH endonuclease	A5H1L2	Xanthomonas_virus	6.8e-32	44.5
WP_076937042.1\|803643_803838_-	restriction endonuclease	Q76H34	Enterobacteria_phage	1.6e-29	98.4
WP_038989108.1\|804052_804640_+	superinfection exclusion B family protein	A0A0M4R594	Salmonella_phage	2.8e-85	99.0
WP_023228640.1\|804652_805015_-	hypothetical protein	C6ZR44	Salmonella_phage	1.2e-57	95.0
WP_076937043.1\|805361_805565_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	1.1e-25	91.0
WP_076937044.1\|805693_806557_-	hypothetical protein	M9NYX6	Enterobacteria_phage	1.3e-94	63.5
WP_076937045.1\|806620_807268_-	LexA family transcriptional regulator	K7PH19	Enterobacteria_phage	3.6e-86	70.8
WP_042948990.1\|807373_807592_+	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.5e-28	84.7
WP_000424165.1\|807722_808001_+	lambda phage CII family protein	A0A220NRS4	Escherichia_phage	4.9e-40	92.4
WP_023206529.1\|808035_808182_+	DUF2740 family protein	A0A0M4S617	Salmonella_phage	9.5e-19	95.8
WP_006789497.1\|808174_809074_+	hypothetical protein	A0A220NQX5	Salmonella_phage	1.5e-154	99.3
WP_076937046.1\|809063_810500_+	AAA family ATPase	K7PGR8	Enterobacteria_phage	5.7e-273	99.4
WP_001580121.1\|810576_811164_+	HNH endonuclease	A0A1B1W266	Salmonella_phage	1.8e-36	47.8
WP_023259230.1\|811165_811591_+	recombination protein NinB	C6ZR55	Salmonella_phage	1.5e-59	79.3
WP_000679702.1\|811587_811761_+	hypothetical protein	C6ZR56	Salmonella_phage	5.2e-32	100.0
WP_076937047.1\|811727_811904_+	NinE family protein	C6ZR57	Salmonella_phage	7.9e-28	98.3
WP_000386647.1\|811906_812266_+	DUF2591 family protein	G8EYI2	Enterobacteria_phage	5.9e-62	95.8
WP_000950962.1\|812265_812442_+	protein ninF	A0A220NRM2	Escherichia_phage	1.9e-26	100.0
WP_076937048.1\|812434_813157_+	phage antirepressor KilAC domain-containing protein	K7P7L0	Enterobacteria_phage	1.0e-129	98.8
WP_001535921.1\|813156_813447_+	DUF1364 domain-containing protein	A0A192Y6R9	Salmonella_phage	3.8e-51	99.0
WP_001008199.1\|813443_813806_+	RusA family crossover junction endodeoxyribonuclease	A5VW85	Enterobacteria_phage	9.2e-63	100.0
WP_000994516.1\|813802_813991_+	protein ninH	A5VW84	Enterobacteria_phage	5.5e-27	100.0
WP_076937049.1\|813987_814506_+	DUF1133 family protein	A0A1R3Y5U9	Salmonella_virus	5.9e-95	99.4
WP_000658765.1\|814700_815213_+	HNH endonuclease	K7PL52	Enterobacteria_phage	4.7e-97	100.0
WP_000738703.1\|815663_815990_+\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_017441427.1\|815973_816411_+	lysozyme	Q5G8R3	Enterobacteria_phage	8.2e-74	97.9
WP_076937839.1\|816428_816881_+\|lysis	lysis protein	Q56118	Enterobacteria_phage	6.5e-58	81.2
WP_076937050.1\|817093_817624_+	KilA-N domain-containing protein	B8K1H1	Salmonella_phage	1.8e-91	97.7
WP_058115777.1\|817987_818230_+	DUF2560 family protein	A0A1R3Y5V5	Salmonella_virus	3.7e-36	98.8
818134:818150	attL	NA	NA	NA	NA
WP_000091987.1\|818231_818411_+	hypothetical protein	A0A088CPS9	Enterobacteria_phage	3.7e-25	100.0
WP_000729924.1\|818434_818923_+	DNA-packaging protein	A8CGG1	Salmonella_phage	2.9e-88	100.0
WP_076937051.1\|818900_820400_+\|terminase	terminase large subunit	C6ZR07	Salmonella_phage	1.4e-306	99.8
WP_076937052.1\|820399_822577_+\|portal	portal protein	I6R968	Salmonella_phage	0.0e+00	98.2
WP_076937053.1\|822590_823502_+	scaffolding protein	A0A1R3Y5R6	Salmonella_virus	7.0e-160	99.3
WP_001196933.1\|823501_824794_+\|coat	coat protein	C6ZR10	Salmonella_phage	1.1e-243	99.8
WP_076937054.1\|824834_825395_+	hypothetical protein	I6S1J7	Salmonella_phage	5.4e-102	98.4
WP_001166101.1\|825378_825879_+	packaged DNA stabilization gp4 family protein	I1TEJ0	Salmonella_phage	5.5e-90	98.8
WP_076937055.1\|825838_827257_+	packaged DNA stabilization protein gp10	I1TEJ1	Salmonella_phage	1.8e-271	97.9
WP_076937056.1\|827260_827899_+\|tail	phage tail protein	A0A088CPT1	Enterobacteria_phage	1.4e-85	93.4
WP_076937057.1\|827898_828354_+	DUF2824 family protein	I6R0L6	Salmonella_phage	1.3e-85	98.0
WP_076937058.1\|828356_829046_+	DNA transfer protein	B9UDK9	Salmonella_phage	4.3e-93	89.1
WP_076937840.1\|829088_830396_+	phage DNA ejection protein	I6RSG0	Salmonella_phage	2.0e-163	73.5
WP_001334102.1\|832245_832614_-	hypothetical protein	I6S5X4	Salmonella_phage	2.9e-64	98.4
WP_021548181.1\|832719_833580_-	helix-turn-helix domain-containing protein	K7P850	Enterobacteria_phage	4.6e-20	35.1
WP_021548180.1\|833677_833851_+	hypothetical protein	NA	NA	NA	NA
WP_058216842.1\|833924_834563_+	hypothetical protein	H6WRU8	Salmonella_phage	1.2e-97	83.5
WP_021548178.1\|834647_835421_+	ORF6N domain-containing protein	H6WRU9	Salmonella_phage	1.1e-78	65.7
WP_063916533.1\|835454_835703_-	Arc family DNA-binding protein	E7C9U8	Salmonella_phage	7.3e-27	84.2
WP_188317995.1\|835838_837971_+	hypothetical protein	A0A0M4RD19	Salmonella_phage	3.0e-60	51.4
WP_076937059.1\|838046_839216_-\|integrase	tyrosine-type recombinase/integrase	I6R0M2	Salmonella_phage	2.7e-228	99.5
WP_000377772.1\|839529_840471_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.4e-147	88.2
839498:839514	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1076839 : 1086010

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1076839_1077787_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
WP_000824854.1\|1077770_1078502_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1078482_1078590_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1078649_1079381_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|1079603_1081289_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|1081285_1082005_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1082051_1082519_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_069721497.1\|1082575_1083106_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1083277_1083736_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_076937102.1\|1083976_1086010_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

1281225 : 1288466

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023252613.1\|1281225_1281645_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.1e-35	60.5
WP_076937159.1\|1281647_1282916_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.9e-227	92.2
WP_000208509.1\|1283361_1283574_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131163.1\|1283584_1283773_+	hypothetical protein	NA	NA	NA	NA
WP_076937160.1\|1284032_1285226_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	3.3e-109	56.0
WP_000107435.1\|1285875_1286187_+	hypothetical protein	NA	NA	NA	NA
WP_039519912.1\|1286266_1286962_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	6.2e-07	27.1
WP_001157305.1\|1287035_1288466_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_5

2891504 : 2935865

Salmonella_phage(60.0%)

holin,integrase,plate,head,terminase,lysis,tail

attL 2890004:2890022|attR 2931977:2931995

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2890004:2890022	attL	NA	NA	NA	NA
WP_000143174.1\|2891504_2892080_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.5e-96	91.0
WP_000049936.1\|2893611_2894292_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	8.1e-129	98.7
WP_063267817.1\|2894288_2895488_-\|plate	baseplate J/gp47 family protein	A0A0M4RD32	Salmonella_phage	1.1e-213	97.2
WP_001270643.1\|2895488_2895842_-	hypothetical protein	A0A0M4R339	Salmonella_phage	2.1e-59	97.4
WP_000301076.1\|2895841_2896594_-	hypothetical protein	A0A0M5M1K7	Salmonella_phage	1.2e-93	71.7
WP_023135366.1\|2896816_2897182_+	hypothetical protein	NA	NA	NA	NA
WP_063267818.1\|2897201_2897534_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	2.9e-23	70.9
WP_063267819.1\|2897530_2898604_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	1.3e-184	95.8
WP_063267820.1\|2898606_2898909_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	1.2e-52	99.0
WP_000353826.1\|2898908_2899484_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	2.4e-97	100.0
WP_063267821.1\|2899483_2901493_-	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	0.0e+00	99.7
WP_000389018.1\|2901670_2902123_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	5.1e-79	100.0
WP_000501635.1\|2902126_2902567_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	9.4e-78	100.0
WP_063267822.1\|2902577_2903729_-	DUF3383 family protein	A0A0M4RD26	Salmonella_phage	9.6e-215	99.7
WP_057935452.1\|2903731_2904298_-	hypothetical protein	A0A0M4R331	Salmonella_phage	8.9e-105	98.9
WP_001142474.1\|2904272_2904662_-	hypothetical protein	A0A0M3ULK0	Salmonella_phage	6.0e-68	97.7
WP_000008736.1\|2904648_2905203_-	hypothetical protein	A0A0M4S631	Salmonella_phage	1.8e-94	99.5
WP_001125677.1\|2905199_2905607_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	1.0e-70	96.3
WP_001040702.1\|2905572_2905941_-	hypothetical protein	A0A0M4RTX5	Salmonella_phage	8.7e-61	100.0
WP_063267823.1\|2905982_2906924_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	9.1e-179	99.7
WP_000128057.1\|2906935_2907433_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	8.7e-88	99.4
WP_000873159.1\|2907437_2908670_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.6e-228	99.5
WP_138010671.1\|2908684_2909422_-\|head	phage head morphogenesis protein	A0A0M4REK0	Salmonella_phage	7.8e-101	88.1
WP_063267824.1\|2909306_2910776_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	2.2e-280	99.2
WP_063267825.1\|2910775_2912398_-	hypothetical protein	A0A0M5M1R6	Salmonella_phage	0.0e+00	98.7
WP_063267826.1\|2912400_2912973_-\|terminase	terminase small subunit	A0A2H4J480	uncultured_Caudovirales_phage	1.0e-60	68.5
WP_063267827.1\|2912993_2913482_-\|lysis	lysis protein	Q8HA85	Salmonella_phage	4.5e-73	91.9
WP_063267828.1\|2913478_2914093_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	5.3e-95	83.8
WP_020844532.1\|2914092_2914374_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	8.2e-35	79.3
WP_001294874.1\|2914360_2914750_-\|holin	phage holin family protein	K7PHB9	Enterobacterial_phage	1.8e-40	71.0
WP_000658039.1\|2914839_2915028_-	hypothetical protein	NA	NA	NA	NA
WP_001244502.1\|2915613_2916048_-	antitermination protein Q	B6SD39	Bacteriophage	4.5e-40	58.9
WP_063267829.1\|2916336_2918523_-	replication protein	B6SCY1	Bacteriophage	1.6e-173	71.5
WP_000170999.1\|2918526_2918739_-	helix-turn-helix transcriptional regulator	A0A0R6PHL1	Moraxella_phage	6.0e-06	42.9
WP_000049987.1\|2918859_2919483_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	1.1e-36	45.3
WP_023135388.1\|2920026_2920551_+	hypothetical protein	C9EH97	Sodalis_phage	8.4e-41	48.8
WP_063267830.1\|2920809_2921712_+	hypothetical protein	NA	NA	NA	NA
WP_063267831.1\|2921714_2923016_+	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	1.6e-133	56.4
WP_063267832.1\|2923030_2923579_+	DUF2815 family protein	Q775A5	Bordetella_phage	3.5e-66	64.8
WP_063267833.1\|2923628_2924267_+	hypothetical protein	H6WRY3	Salmonella_phage	2.0e-76	71.0
WP_063267834.1\|2924341_2926408_+	DNA polymerase	Q775A3	Bordetella_phage	2.8e-273	67.8
WP_000077590.1\|2926412_2926625_+	hypothetical protein	NA	NA	NA	NA
WP_000873865.1\|2926621_2926825_+	hypothetical protein	NA	NA	NA	NA
WP_000007248.1\|2926835_2927051_+	ANR family transcriptional regulator	NA	NA	NA	NA
WP_063267835.1\|2927051_2927531_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	6.7e-69	80.1
WP_063267836.1\|2927533_2927842_+	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	2.2e-25	64.7
WP_109208487.1\|2927799_2928555_-	hypothetical protein	NA	NA	NA	NA
WP_000070075.1\|2928591_2929992_+	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	6.0e-211	73.4
WP_024136027.1\|2930000_2930177_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_001046411.1\|2930183_2930651_-	hypothetical protein	NA	NA	NA	NA
WP_000772661.1\|2930651_2931824_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	5.0e-110	49.0
WP_076937484.1\|2932168_2933416_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.5e-99	47.9
2931977:2931995	attR	NA	NA	NA	NA
WP_076937485.1\|2933427_2934531_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.1e-61	39.8
WP_001043667.1\|2934812_2935865_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.6e-113	58.8

DBSCAN-SWA_6

3394206 : 3480333

Salmonella_phage(31.58%)

integrase,tRNA,transposase,protease,tail

attL 3454162:3454177|attR 3471911:3471926

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001094606.1\|3394206_3395220_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_000841654.1\|3395220_3395994_-	Uxu operon transcriptional regulator	NA	NA	NA	NA
WP_023193204.1\|3396343_3397018_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_076937567.1\|3397014_3397476_-	DUF302 domain-containing protein	NA	NA	NA	NA
WP_020898330.1\|3397680_3398592_-	hypothetical protein	NA	NA	NA	NA
WP_023138505.1\|3398867_3399863_-	hypothetical protein	NA	NA	NA	NA
WP_000864866.1\|3400114_3400723_-	DUF1062 domain-containing protein	NA	NA	NA	NA
WP_076937568.1\|3401210_3401468_+	YjhX family toxin	NA	NA	NA	NA
WP_078056645.1\|3401472_3403104_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000532939.1\|3403664_3404381_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_078056668.1\|3405205_3405808_+	DUF1819 family protein	NA	NA	NA	NA
WP_000566905.1\|3405804_3406407_+	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_076937571.1\|3406418_3410060_+	BREX system P-loop protein BrxC	NA	NA	NA	NA
WP_076937572.1\|3410104_3413749_+	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
WP_076937573.1\|3413748_3414837_+	ATP-binding protein	K7PHD1	Enterobacteria_phage	1.8e-05	27.3
WP_078056646.1\|3414814_3415636_+	DUF4435 domain-containing protein	NA	NA	NA	NA
WP_076937869.1\|3415638_3418236_+	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_001193068.1\|3418246_3420331_+\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_094742629.1\|3421606_3422862_-\|transposase	IS3 family transposase	B6DZX3	Stx2-converting_phage	1.7e-18	30.3
WP_076937576.1\|3424122_3425223_+	hypothetical protein	NA	NA	NA	NA
WP_076937870.1\|3429321_3429441_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.6e-14	94.9
WP_188317985.1\|3429455_3429710_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	3.4e-32	91.7
WP_076937577.1\|3429812_3430328_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	9.0e-88	94.7
WP_076937578.1\|3430337_3431510_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.8e-207	92.8
WP_076937871.1\|3432639_3433014_+\|tail	tail fiber assembly protein	A0A0M4S6V4	Salmonella_phage	1.2e-25	72.7
WP_078056648.1\|3432985_3433108_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	5.3e-07	83.3
WP_076937579.1\|3433240_3434446_-	acyltransferase	A0A088CPR9	Enterobacteria_phage	6.9e-22	27.2
WP_076937580.1\|3434567_3434984_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.2e-37	56.7
WP_076937581.1\|3435286_3435571_+\|transposase	transposase	U5P4I9	Shigella_phage	4.0e-13	44.8
WP_078056649.1\|3435567_3436422_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.4e-77	55.0
WP_001199743.1\|3437244_3437553_-	CcdB family protein	NA	NA	NA	NA
WP_000016244.1\|3437555_3437795_-	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA
WP_023203347.1\|3437903_3438152_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_076937583.1\|3438216_3439050_-	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_001194750.1\|3439165_3439507_-	toxin	NA	NA	NA	NA
WP_000380486.1\|3439550_3439892_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_076937584.1\|3439914_3440136_-	DUF987 family protein	NA	NA	NA	NA
WP_023240991.1\|3440132_3440633_-	DNA repair protein RadC	NA	NA	NA	NA
WP_076937585.1\|3440645_3441467_-	DUF945 domain-containing protein	K4F5L3	Cronobacter_phage	4.0e-45	39.0
WP_078056650.1\|3441551_3442568_-	hypothetical protein	NA	NA	NA	NA
WP_076937586.1\|3442530_3442734_-	hypothetical protein	NA	NA	NA	NA
WP_023892166.1\|3442750_3442897_-	hypothetical protein	NA	NA	NA	NA
WP_076937587.1\|3442969_3443683_-	WYL domain-containing protein	NA	NA	NA	NA
WP_076937588.1\|3444036_3444330_-	hypothetical protein	NA	NA	NA	NA
WP_149866838.1\|3444435_3445395_-	hypothetical protein	NA	NA	NA	NA
WP_076937590.1\|3445894_3446530_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_001620335.1\|3446634_3446841_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_076937591.1\|3446897_3447473_+	hypothetical protein	NA	NA	NA	NA
WP_149866839.1\|3448164_3449346_-	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	2.0e-10	38.1
WP_076937593.1\|3450015_3453429_+	DEAD/DEAH box helicase family protein	Q6NDX2	Leptospira_phage	1.9e-16	26.3
3454162:3454177	attL	NA	NA	NA	NA
WP_188317986.1\|3455120_3456338_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_076937594.1\|3456334_3458026_+	ATP-binding protein	NA	NA	NA	NA
WP_076937595.1\|3458015_3458942_+	HNH endonuclease	NA	NA	NA	NA
WP_076937596.1\|3459043_3460009_+	5'-nucleotidase	NA	NA	NA	NA
WP_076937597.1\|3460086_3460962_-	HNH endonuclease	NA	NA	NA	NA
WP_076937598.1\|3461177_3462443_-\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	5.5e-78	39.3
WP_000152563.1\|3462936_3463956_+	NAD(P)-dependent alcohol dehydrogenase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	1.3e-42	30.1
WP_076937599.1\|3463983_3464514_-	gluconokinase	NA	NA	NA	NA
WP_076937600.1\|3464730_3465762_+	L-idonate 5-dehydrogenase	NA	NA	NA	NA
WP_000998688.1\|3465786_3466551_+	gluconate 5-dehydrogenase	NA	NA	NA	NA
WP_001128356.1\|3466612_3467932_+	gnt-II system L-idonate transporter	NA	NA	NA	NA
WP_001244065.1\|3467995_3468994_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001182242.1\|3469189_3470272_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_000584132.1\|3470271_3471372_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_000397158.1\|3471766_3473278_+	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	8.3e-49	38.7
3471911:3471926	attR	NA	NA	NA	NA
WP_001523689.1\|3473414_3473858_+	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_020898298.1\|3473857_3476713_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.0e-140	37.1
WP_001534452.1\|3476854_3478042_-	DUF898 domain-containing protein	NA	NA	NA	NA
WP_078056651.1\|3478236_3478740_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000826193.1\|3478846_3479335_+	DUF3617 domain-containing protein	NA	NA	NA	NA
WP_023257565.1\|3479568_3480333_-\|tRNA	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	NA	NA	NA	NA

DBSCAN-SWA_7

4753014 : 4800033

Escherichia_phage(51.22%)

holin,integrase,plate,head,terminase,portal,lysis,capsid,tail

attL 4748834:4748848|attR 4776567:4776581

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4748834:4748848	attL	NA	NA	NA	NA
WP_000785626.1\|4753014_4753413_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_000031219.1\|4753415_4753721_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_000877297.1\|4753762_4754131_-	DUF1090 domain-containing protein	NA	NA	NA	NA
WP_000917516.1\|4754275_4754659_-	EnvZ/OmpR regulon moderator MzrA	NA	NA	NA	NA
WP_000422143.1\|4754662_4755325_-	DedA family protein	NA	NA	NA	NA
WP_000235363.1\|4755774_4757019_-	serine/threonine transporter SstT	NA	NA	NA	NA
WP_001098833.1\|4757273_4758242_-	TerC family protein	I7HPH5	Enterobacteria_phage	5.0e-39	34.9
WP_000617682.1\|4758511_4759510_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000951045.1\|4759598_4760291_-	vancomycin high temperature exclusion protein	NA	NA	NA	NA
WP_000202966.1\|4760442_4760940_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_023206299.1\|4761025_4762162_+	23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA	NA	NA	NA
WP_023206298.1\|4762242_4764261_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_076937817.1\|4764431_4765811_-	putrescine aminotransferase	A0A1V0SKB7	Klosneuvirus	3.8e-32	29.0
WP_076937818.1\|4766240_4767761_+	PAS domain-containing methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	8.4e-33	47.8
WP_000478462.1\|4768148_4769717_+	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.2e-12	33.5
WP_000983434.1\|4769713_4770361_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_076937819.1\|4770592_4771360_+	siderophore-interacting protein	NA	NA	NA	NA
WP_076937820.1\|4771556_4772594_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	6.7e-199	97.4
WP_076937821.1\|4772593_4773172_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	9.2e-65	63.6
WP_000135597.1\|4773302_4773566_+	hypothetical protein	A0A218M4I5	Erwinia_phage	3.3e-38	89.7
WP_000459332.1\|4773596_4774106_+	phage regulatory CII family protein	A0A0M4QWN1	Salmonella_phage	6.2e-89	98.8
WP_000920168.1\|4774113_4774341_+	DUF2724 domain-containing protein	A0A0M4RTI3	Salmonella_phage	2.1e-36	97.3
WP_000085639.1\|4774327_4774528_+	hypothetical protein	A0A0M5M7U3	Salmonella_phage	2.3e-31	98.5
WP_001246237.1\|4774597_4774825_+	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	6.8e-32	100.0
WP_000752604.1\|4774824_4775049_+	TraR/DksA family transcriptional regulator	Q6K1F5	Salmonella_virus	6.5e-35	100.0
WP_153259982.1\|4775070_4775664_-	hypothetical protein	NA	NA	NA	NA
WP_076937823.1\|4775689_4777909_+	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	95.8
4776567:4776581	attR	NA	NA	NA	NA
WP_023135274.1\|4778027_4778468_+	DinI family protein	A0A218M4I0	Erwinia_phage	2.7e-69	98.5
WP_076937824.1\|4778549_4779281_+	hypothetical protein	Q37850	Escherichia_phage	1.4e-129	94.7
WP_000038161.1\|4779757_4780792_-\|portal	phage portal protein	A0A0F7LDI7	Escherichia_phage	1.9e-201	100.0
WP_000156861.1\|4780791_4782564_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
WP_076937826.1\|4782737_4783592_+\|capsid	GPO family capsid scaffolding protein	Q94MB7	Escherichia_virus	7.1e-138	88.4
WP_076937827.1\|4783650_4784724_+\|capsid	phage major capsid protein, P2 family	Q94MK2	Enterobacteria_phage	3.3e-201	99.7
WP_076936847.1\|4784727_4785471_+\|terminase	terminase endonuclease subunit	A0A0F7LBP7	Escherichia_phage	7.3e-123	97.6
WP_076937828.1\|4785570_4786080_+\|head	head completion/stabilization protein	A0A0F7L9Y3	Escherichia_phage	5.6e-90	99.4
WP_000846409.1\|4786079_4786283_+\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_000123123.1\|4786286_4786568_+\|holin	phage holin family protein	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
WP_001144101.1\|4786567_4787065_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_001598741.1\|4787079_4787505_+	hypothetical protein	A0A0F7LDU9	Escherichia_phage	5.0e-60	97.2
WP_076936848.1\|4787492_4787918_+\|lysis	LysB family phage lysis regulatory protein	Q7Y4E2	Escherichia_virus	1.0e-65	95.7
WP_000917179.1\|4788025_4788493_+\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	3.0e-82	100.0
WP_032230352.1\|4788485_4788938_+	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	1.8e-76	99.3
WP_076936849.1\|4789004_4789646_+\|plate	phage baseplate assembly protein V	A0A0F7LBP2	Escherichia_phage	1.0e-96	89.8
WP_000127163.1\|4789642_4789990_+	GPW/gp25 family protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_076936850.1\|4789994_4790903_+\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	3.7e-161	99.3
WP_076936851.1\|4790895_4791507_+\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.1e-116	99.5
WP_021530854.1\|4792702_4793140_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	4.8e-50	64.8
WP_021530855.1\|4793111_4793714_-\|tail	tail fiber assembly protein	K7P870	Enterobacteria_phage	8.3e-93	86.9
WP_076937829.1\|4793713_4794211_-\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	3.3e-55	69.3
WP_076936854.1\|4794241_4794835_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	3.9e-103	96.4
WP_076936855.1\|4794894_4796085_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.4e-224	99.5
WP_001251405.1\|4796097_4796616_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	5.5e-93	99.4
WP_001031303.1\|4796672_4796948_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_000785970.1\|4796980_4797100_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001774113.1\|4799553_4800033_+\|tail	phage tail protein	A0A0F7LBX3	Escherichia_phage	1.9e-84	98.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019405

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection