CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009471	Marinitoga sp. 1137, complete genome	4 crisprs	cas4,cas3,cas6,cas8b2,cas7,cas5,cas2,PrimPol,cas1,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh,csa3	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009471_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009471_1

335376-335739

Unclear

Consensus_repeat	Method
GTCTTTAATAATCCATATTGGAATGTAAAT	PILER-CR
GTCTTTAATAATCCATATTGGAATGTAAAT	CRISPRCasFinder
GTCTTTAATAATCCATATTGGAATGTAAAT	CRT

5 spacers

cas2,cas4,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_CP009471_1

>merge|NZ_CP009471|1|335376-335739|PILER-CR,CRISPRCasFinder,CRT
GTCTTTAATAATCCATATTGGAATGTAAATACTGGCATGTGGCATTGGCGCTTGATGTTAAAACTTAAGTCTTTAATAATCCATATTGGAATGTAAATGAGTTTGAGATTGGTAAAGAAGTTGATTTACTTACTGTCTTTAATAATCCATATTGGAATGTAAATTTATTATACACTGCAATGACACCTAACGCAATAATAGTCTTTAATAATCCATATTGGAATGTAAATCGCAGATGCTTATCAACACGCACGCGTCTTGTTTTTTGTCTTTAATAATCCATATTGGAATGTAAATTTTCTGAACGCTGAGAATCGCTTAAAAATCCTCCGATGTCTTTAATAATCCATATTGGAATGTGAAT

>NZ_CP009471|1|1|335376-335739|PILER-CR
GTCTTTAATAATCCATATTGGAATGTAAAT	ACTGGCATGTGGCATTGGCGCTTGATGTTAAAACTTAA
GTCTTTAATAATCCATATTGGAATGTAAAT	GAGTTTGAGATTGGTAAAGAAGTTGATTTACTTACT
GTCTTTAATAATCCATATTGGAATGTAAAT	TTATTATACACTGCAATGACACCTAACGCAATAATA
GTCTTTAATAATCCATATTGGAATGTAAAT	CGCAGATGCTTATCAACACGCACGCGTCTTGTTTTTT
GTCTTTAATAATCCATATTGGAATGTAAAT	TTTCTGAACGCTGAGAATCGCTTAAAAATCCTCCGAT
GTCTTTAATAATCCATATTGGAATGTGAAT

>NZ_CP009471|1|1|335376-335739|CRISPRCasFinder
GTCTTTAATAATCCATATTGGAATGTAAAT	ACTGGCATGTGGCATTGGCGCTTGATGTTAAAACTTAA
GTCTTTAATAATCCATATTGGAATGTAAAT	GAGTTTGAGATTGGTAAAGAAGTTGATTTACTTACT
GTCTTTAATAATCCATATTGGAATGTAAAT	TTATTATACACTGCAATGACACCTAACGCAATAATA
GTCTTTAATAATCCATATTGGAATGTAAAT	CGCAGATGCTTATCAACACGCACGCGTCTTGTTTTTT
GTCTTTAATAATCCATATTGGAATGTAAAT	TTTCTGAACGCTGAGAATCGCTTAAAAATCCTCCGAT
GTCTTTAATAATCCATATTGGAATGTGAAT

>NZ_CP009471|1|1|335376-335739|CRT
GTCTTTAATAATCCATATTGGAATGTAAAT	ACTGGCATGTGGCATTGGCGCTTGATGTTAAAACTTAA
GTCTTTAATAATCCATATTGGAATGTAAAT	GAGTTTGAGATTGGTAAAGAAGTTGATTTACTTACT
GTCTTTAATAATCCATATTGGAATGTAAAT	TTATTATACACTGCAATGACACCTAACGCAATAATA
GTCTTTAATAATCCATATTGGAATGTAAAT	CGCAGATGCTTATCAACACGCACGCGTCTTGTTTTTT
GTCTTTAATAATCCATATTGGAATGTAAAT	TTTCTGAACGCTGAGAATCGCTTAAAAATCCTCCGAT
GTCTTTAATAATCCATATTGGAATGTGAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009471.1\|WP_075780196.1\|342906_343716_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_156865366.1\|345251_345419_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_014295806.1\|336264_336441_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_075780197.1\|343800_345255_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP009471.1\|WP_075780182.1\|324915_326160_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_075780187.1\|330486_331236_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|273860
NZ_CP009471.1\|WP_075780181.1\|323771_324911_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225363
NZ_CP009471.1\|WP_075780185.1\|327928_329626_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187884
NZ_CP009471.1\|WP_014295811.1\|339426_341181_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP009471.1\|WP_075780188.1\|331246_333418_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|187770
NZ_CP009471.1\|WP_075780186.1\|329627_330500_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP009471.1\|WP_075780190.1\|334916_335201_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_CP009471.1\|WP_075780193.1\|336516_337047_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_075780195.1\|341279_342554_-\|TrpB-like-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|237087
NZ_CP009471.1\|WP_075780191.1\|335912_336194_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_075780194.1\|337695_339426_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP009471.1\|WP_075780183.1\|326202_326793_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_075780184.1\|327212_327917_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|224499
NZ_CP009471.1\|WP_075780198.1\|345580_345943_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374235
NZ_CP009471.1\|WP_075780189.1\|333427_333919_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863

Protein	Function_ID	Function_description	E-value
NZ_CP009471.1\|WP_075780197.1\|343800_345255_-\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	1.92026e-36
NZ_CP009471.1\|WP_075780187.1\|330486_331236_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	4.31899e-25
NZ_CP009471.1\|WP_075780181.1\|323771_324911_+\|hypothetical-protein	gnl\|CDD\|225363	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].	6.59542e-75
NZ_CP009471.1\|WP_075780195.1\|341279_342554_-\|TrpB-like-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|237087	PRK12391, PRK12391, TrpB-like pyridoxal phosphate-dependent enzyme.	0
NZ_CP009471.1\|WP_075780188.1\|331246_333418_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	1.07499e-60
NZ_CP009471.1\|WP_075780186.1\|329627_330500_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	2.45901e-58
NZ_CP009471.1\|WP_075780190.1\|334916_335201_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.38957e-28
NZ_CP009471.1\|WP_014295811.1\|339426_341181_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.87323e-180
NZ_CP009471.1\|WP_075780185.1\|327928_329626_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	8.81901e-18
NZ_CP009471.1\|WP_075780194.1\|337695_339426_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.13798e-175
NZ_CP009471.1\|WP_075780184.1\|327212_327917_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|224499	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.08376e-26
NZ_CP009471.1\|WP_075780198.1\|345580_345943_-\|hypothetical-protein	gnl\|CDD\|374235	pfam15933, RnlB_antitoxin, Antitoxin to bacterial toxin RNase LS or RnlA. RnlB_antitoxin, formerly known as yfjO, has been found to be the antidote protein to RNase LS or RnlA in E. coli. Bacterial toxin-antitoxin systems consist of a stable toxin and an unstable antitoxin. In this case, a novel type II system, RnlA is the stable toxin that causes inhibition of cell growth and rapidly degrades T4 late mRNAs to prevent their expression, and this is neutralized by the activity of the unstable antitoxin RnlB.	9.11815e-18
NZ_CP009471.1\|WP_075780189.1\|333427_333919_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.54594e-55

>NZ_CP009471.1|WP_075780190.1|334916_335201_+|CRISPR-associated-endonuclease-Cas2
MYIILVYDIKFDEEGKGQKILPKVFKICKKYLYHIQNSVFEGELTKAEILKLKSELEKVIRKDEDSIIIFKSRHERWLEKDFWGLKEDKTSNFL
>NZ_CP009471.1|WP_075780189.1|333427_333919_+|CRISPR-associated-protein-Cas4
MKNISGIEFYYYFICKRKLWFYSHKILMEEENEDVQIGKIIEENYYKNNTKNIMINDEINIDLIKNKKILHEIKKSQTFEEASIWQLKYYIYYLRNYDIDISEGIIDYPKLRKRIKVKFSEEDKTKIEEIIKNIIQIKETDKIPDVVNKKYCKKCAYYELCYI
>NZ_CP009471.1|WP_075780188.1|331246_333418_+|CRISPR-associated-helicase/endonuclease-Cas3
MKFLAKSNPEETIQEHTDNLLFQLKHLKNIYKQIPINWDLLEYVCLYHDLGKINENFQNKLRYHKRYNKEIPHALLSLLFIDPDELSEKFSDEEIQILYQAVAYHHERNYADYSNEIIENQYESLKKQLKNFKYEKIPNLHLVDYIDDYYFQLGDRTYKENSNFKKYVLIKGLLNKLDYAASAHIDVELKNDFLIENLEKIGYQWNELQKFMIKNREKNVIAIAQTGMGKTEAGLLWIGNNKGFYTLPLKIAINAIYDRIIKKILKKEYIEKVGILHSDTYSEYLKREEILEELDLNYYYTATKQMSLALTITTLDQLLDIVYLYRGFEAKLATLSYSKIVFDEVQMYSADLLSYLLLGIKLITDFDGKFSILTATLPTFLIDFMKKMKINFIIPEKPFINDRIRHSVKVIDEEINSDFIYNIYNKNQKERILVICNTVKKVQEIYNNLKDYGINEINLLHSKFIKKDRLKKEKEIIEFGNNYASNGIWISTQIVEASLDVDFDILITELSDLNSFFQRLGRVYRHRDWEKDGYNTYLFLGGEKNKISGLKSFIDKDIFKLSKEKLKNVDGVLTEKDKIELINSTYTVENLKDTEYYKTLEKMIEYVKSFNPYEAEKKDINKIFRNIENVIVIPEPVYLENKNIIETLISKYNDVNLTKKEKYNVKIKIMEYTSSIWFRELKKIDELKLNKYEKIYIHKCEYSPEVGIYYEKSEEIDDENQFF
>NZ_CP009471.1|WP_075780187.1|330486_331236_+|type-I-B-CRISPR-associated-protein-Cas5
MKAIKIKIEQETANYKIPTSFGLRETYPLPPYSTVIGMIHKLCDFKDYKEMKLSIAGKYNSKTNDLYTRYEFKPGMKFEKGRHQLKIEEYNYGITRGIATTELLVNVELLIHIVPKDESLLEIIENALKYPREYPSLGRREDLAIIRDVKIIDFHKKILEKSIRSNYSYYIPEEYINTIKSINKVSGIKFTGTKYTLNKDYTLQSIGSGKNTKIFRKWNKIKVLYNSNISILRNHEAYIDEDNDVLFLA
>NZ_CP009471.1|WP_075780186.1|329627_330500_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MERKGLTLTIVFEAESANYGEGIGNVTSLKKLSRENGMYTYISRQALRYNIVEQLEEDLAPVVAEGSGDKKVIQFHPDATIEKYPEIDFFGYMKTEKGKGSLTRDAKVRLSNAIALEEFYGDLDFLTNKGLADRLNENMNIAQSEIHRAYYRYTINIDLDEIGIDLNDEINLPNEEKARRIEKLLDTIAFLYRDIKGRREDLKPLFAIGGVYNIKNPFFQNLVEVKNNKIKVEPLVSMLEYPEIKENTLCGVINGKFDNENEIKEKLNAISIPELFKTLKERVRKYYESN
>NZ_CP009471.1|WP_075780185.1|327928_329626_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MEEIKNNFLIFRTSDWLYNAGLVGLIEILGHDNVRYRTNEENEDLDFDEVKISINAFENFEEKFFNYFIETYTNLPWHQLVSYKEAVETLNEKNEYNIKDLELLNKMIDYFKNNLKKNSFKSVYPLIEEKENIKLDILNEIKKLKKIKKVEKIEDIKNNLLILENLINFLNLKSSKKYIVAQNIRYSNLIRNAWDGVSFLNRQTKEKDVYIDYKKHFIDTFFNYINIDDEEFKKYKYKCFSCNRPIKSLEYNMSFLKNIGFDDARKPSNVWNFVNDTYICPICRLVYSCVPAGFTYVYDKGIFINLNHSIEELVRINKKIKMQVLNDPHNNLNNSYSELLKSIYENKNKTASYEYSDIQIVKLKNEKYEFNILSKKILSVLKNSEEELDFLIAQFYFPSNNKNWNEKISIYEEVIYRISNNISLYSLINTLLRLKISNVNNGYFNTFTIKQLIKINLNYLKEVKNMEFPENLVGNANYQGYLLKKEYNRKNSEHKLGGISYKLLNALKVNNKDGFMDVILNCYLYVDKPVPKVIIEALENDEVFKTAGYSFVAGLIGESNTKGEE
>NZ_CP009471.1|WP_075780184.1|327212_327917_+|CRISPR-associated-endoribonuclease-Cas6
MRLKLVFNLKENAFPKDYRRVFMSFIKKSLQSYDEMLYTKYYKNQDPILKDYTFSVYFGKCKFLDFIELENTNLSLFFSTPSYTTGAYFYNAFMNMKFEAFPIKGNSLKLTKIIKIPEKVIHKNEVIVKTLSPILIREHTKETDKFYYFDEDKAIDILKENIKYQYTKLFDYKISDFTIKPLDIKKTTVLNYNKKIKSNLGIFKISGDTKLLGFLYKSGIGSKRSSGFGMVEII
>NZ_CP009471.1|WP_075780183.1|326202_326793_+|hypothetical-protein
MHLKKERYFLGIGIILMFINELNTIGIILQFIGIYLLSEKTNNKKTFYYFVISLFLFYSLISFFVPQSIIMIFKNYPGLANNFDSLFTLKYSLLESIRNYFFVISLSFFIYLISLILERIAYKNLYDITLSKELSIAIKLISVEAVVLTFSYLLLAKFVIDDVIILNLLIILFVLNLTLIFLIKLFEIIGFINIEQ
>NZ_CP009471.1|WP_075780182.1|324915_326160_+|hypothetical-protein
MGYYSKSPEEWKKLDEEKAKKDKLRQIQKRRQKINNMLIIFISILAIAFIFISKKYFPRYNFGFYVLVDKISYSIFSSDKYTYPDPLTVSVSMNNSTTSPIDVKIDSFKFIIYKITGDSSETFYKFEYPKIIKYQLSPYETKKIFDLMNINPLSKIPDGKYIIYSTFNSNGKEIKLHKEIDYIHTVRYNVYLKKGFFLENEYPQLIIEARNYSEETRQFEFKGTIQIYTKKKKLIKEIPVDFGYLTLKSLEKKVNDFNIPRIEKGTYDLYFVSKQFNQAVYIPFPITDKIETKLKNISLSMDTYLFYPVNEKFQGIFYINNKDLKKERFIEITGYSLRLINLDKNTVVFNYENSDKRRIYINSGGKAIVYYLSPYDRPVTLSIPGKYQLIYTVKTNESVIERKVTVYVGINQNK
>NZ_CP009471.1|WP_075780181.1|323771_324911_+|hypothetical-protein
MKSKLEKLAIEQLFTNSTVDFFKKTEDTNSSRLSSFEDIMMYLLNNNISDLHFSSKKSCVTIYYRYNTELIKLSELEKDEYKKILTKIQIMSKIDIINNRDPADGSFTFLNNYFRVSLINNNYGTNCVIRKLKTINDLTVENLKYPEEFLKSIESIKLHKDGLIIFSGPTGSGKTTSLAFIILQLLKEKTKKIITIENPLEYIIPGAEQIEIKNDSQKTSILKNILRHDPDIIMTGEIRTDEFAKLTLESAMTGHYVFSTIHANNVFNAIQRLELLGLNKSYLLDTLKIIYNQRFVKILCSCNKKGCETCKYTGYSDIIPVFEILHINEYTKQMILSNKIDEIKNSIFYISPEIQLNRLLIQGKIDTEEYNQFITSIGG
>NZ_CP009471.1|WP_075780191.1|335912_336194_+|hypothetical-protein
MEKEIDALTYAYRYNSAITDYEDDPYYAEDAAYFREMAMRKLKKVTNPRIKKEATKIIEETDQILKKERKNIIRILSGLSDIDKKELKYLERI
>NZ_CP009471.1|WP_014295806.1|336264_336441_+|hypothetical-protein
MVIKIKKIKLYDYEEYKENAFRKNPRLKEAYDSLEEKYKAISQEIINNMNLVKKDKDI
>NZ_CP009471.1|WP_075780193.1|336516_337047_-|hypothetical-protein
MKKLLTALLVGGLMTGSIFAFNANAPRVYQETSGTVPMYQNYQGVPGGYLFTEENMITVTGVIESIEENEDYPGLLEIKVKTEAGEEIELHANAYFVGSLEIGQTMEVTGWSVEINGEKIFRPAETKIDGEEILLNGFRGSARGTGYASQTQYPAQPGAYAKPAPRGRGHGGRGRF
>NZ_CP009471.1|WP_075780194.1|337695_339426_+|ABC-transporter-ATP-binding-protein
MKSILKYVSQQKRFIIIASLCLIGGVSAELILPYLNKIVIDDIIVGGKRNLLFPVLSGIFFITIFRALMGYSQEFLFDFTGSQISKNIKNDLFKHIQKLPFTYFDKTNTGELMSRIGEDVDNIWNALGFGISIAVEFALYFILGSLVLFYLNWKLALISLISAPAIAYLATKLENEIGKAFDKISDQAAVINTTAQENISGVRLVKAFAREKYEIMKFLKLNNENYELNLEKSRIWGKYFPTIEFLGNGALILVVTVGGALVIKGNISIGTLVAFNGYMWMIVWPMRLIGWLSNIFSQANASAKKIEKILKEDTEDFKGIKIEKLNGEIEFKNVSFKYDNEYILKNINFKIKPGKTLAIMGPTGCGKSTLISLLSRFYEIDEGEILIDGINIKDFSLNTLRKNISYVFQDTFLFSDTVKENIKYGNDNIDDKEIISACKEAQAYDFIMKLPEKFDTIIGERGLGLSGGQKQRLTIARALIKKAPIIIFDDATSALDMDTEYELLKSIYSKELQNTKIIIAHRISAVKNADEIIYLDNGEIIERGTHDELLNMKGRYYEIYAEQFKDFEDLIEDEVV
>NZ_CP009471.1|WP_014295811.1|339426_341181_+|ABC-transporter-ATP-binding-protein
MNLKFEKTKTILRIFSYLKPFFKQTIMVIFLMIIVMGINLINPYFFKIAIDKYIANNNLNGLIIVGVAVMFLNLLSLFISRMRIILMGKITNKIVVNIRHELYEHIQKLSFSFFDTKPVGKILARVVNDVNSLQQLFSNSITSLVPEFLTLVFVAIIMFSMNFKLALASMIILPFLLFGLFLIENISRKRWMNYRKNRSELNAFTHEDISGIRIIKSFTAENKTNKKFRFLTQKMMNSFVNAVKINDWFWAMVLVSWGIGSVVVFYLSTKMIDLNEITVGTVVAFIGYIGMFWRPIMNLSNFYNSLVTNISAAERIFEILDTKPLIVNSKNARIMPEIKGKVEFKNVYFSYDKEIILKDMSFKVNAGETIALVGPTGAGKTTVINLISRFYDPQKGKILIDGIDIKNVDLESLRSQMGIMLQDTFLFSDTIKENIRYGKLDATDEEIINVAKAVHAHEFIMKLEKGYDTKVNERGVRLSIGERQLISFARALLANPKILILDEATSNIDTHTEKLVQDGIKKLLKGRTSFVIAHRLSTIRNADRIFYIDNGKIIESGNHDELMSKKGFYYNLYLSQFKFLEIGA
>NZ_CP009471.1|WP_075780195.1|341279_342554_-|TrpB-like-pyridoxal-phosphate-dependent-enzyme
MGKRERVYLSVEEMPKYWYNALADLPFELDPPLNPQTKEIMKPEELEAIFPKPIVEQEVTKERYIKIPDEVLEEYAIFRPTPLIRATNLEEYLETPARIYYKYEGVSPTGSHKTNTSIPQAYYNRISGVDTLVTETGAGQWGSALSYAGLKFGLNIEVYMVKTSFEQKPMRKHLINLFNGKVTPSPSLDTEFGKKMISMDEDNPGSLGIAISEALEVVFTKKNAKYALGSVLNHVLLHQSIIGLEIKKQLEKINESADVVIGCHGGGSNLGGTILPFVPEKLSNDNIKFLACEPKSCPSLTEGEYRYDNGDTAGLTPLMKMYTLGKEFIPPKIHAGGLRYHGSAPIIARLKHEGLLDAVAFSQDETFEAAKLFAKLEGIVPAPESSHAIAGAIKEAIEAKENKEEKVIVFTLSGHGLLDLTAYS
>NZ_CP009471.1|WP_075780196.1|342906_343716_+|hypothetical-protein
MKINTEIIDTYLMEKNLKKLSNNKIFSLIENGKILFEAPPEESYQKIKNTYNLFKNIIFSFKPCNYNIWKNIFEISDNTDNSFIIFPIIGAPSPYEAMIRYDENGNTLMIFDIYLLEKNIDNPPKLKENISLLITHELAHYYIHQRFQYPQKIENQLKYLFFDEGFAHFLSYSNNIEQINWNEKKYIKKREYSYEMLKEKLKNKLDKNLLIKGITANNYWDKYIAISGMFAIIDFWHSNNKKLDSLKLLYKKGPEYLWNFWEINYLTKT
>NZ_CP009471.1|WP_075780197.1|343800_345255_-|recombinase-family-protein
MKKAAAYARVSTTEQSKTSIDGQLDTIRNFAKFNDIKIVEEFWDKESGGKMSRPNFDIMIENAFAGKYDLILVEKIDRFAREDIEATLLIKQLEDAGIFVMSVLEPADVTTPSGRFQRWIMLGFGKLEREIIADRTKRRMRDTAKRGYWMGGIPPYGYKTVEVKDNEERIRKKLEIVEEEAKVIRKIFELHADGKGLAAIADYLNNKNILTRKGKTWAKTTIYDILRNKKYIGIYEYGRGTKKNHHAKNTKPLIIENVIPPIIDDELWEKSKSQFRTPVRISMIRNYLLRGKIYCAECGAPLVGNGGKKSMYVCSNWKSRKGDHYVGISKNKIEKHVFLHLKHLLIDNKPDFREIANTFNYLYQTKKQSKNKKIKYVENMLNEKYEQRKNIIDAIKKGVMVESLTEEAENIEKEIKRLKLELERLMQNEYFEITEEELEHRWNNLTEMILSDDEDTLKELYDLLIERIEVASDGYIRIINKELL
>NZ_CP009471.1|WP_156865366.1|345251_345419_-|hypothetical-protein
MIIVRVLVSEEDLDLLKEFGFMFWDERKLTQEELYNFYKFLLSLQKVSKEGSEEL
>NZ_CP009471.1|WP_075780198.1|345580_345943_-|hypothetical-protein
MESFKIKKIKNEKYEYLVLSISYINPFEELDKIEKKLKTRKYKGYILFDLYLSHVNNNYRFAEGYFDGEKFVKSKFKWLSDIGENIKKISYKFFSDHPDYIDNSLLSSVDKLYFKEKMFI

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Crispr_ID: NZ_CP009471_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009471_2

437248-439803

TypeIII

Consensus_repeat	Method
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	PILER-CR
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CRISPRCasFinder
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CRT

33 spacers

PrimPol,cas1,cas2,csx1,csm6,cas6,cmr6gr7,cmr5gr11

The CRISPR arrays of NZ_CP009471_2

>merge|NZ_CP009471|2|437248-439803|PILER-CR,CRISPRCasFinder,CRT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACACCTCACGAATTTCAAATTTTTCGTCAAAACTCCCATCATAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTAACCTTGACTTAACTCTATATACATTGATTCTCTTTTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTCTTTTAATTCTATATTATCATTTAAATCTATTAATAACATATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTCTTCTAATAAATGTTTTTCAAATTCTTTACTGAATTTAATATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAATTCATCACTACTGTTATTTGTAAATGTATATGTTGGAGTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACATTATCGACTTTTAATTGAGGCTCTGTTTTCCTCCACTCTAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTTTAAACTCACAATTTCGTTGTTTTCCTTCTCGAAACTCTTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAGTTGATAGTTATTTGCTATCTTGTAAGATATGTTCAAAAAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTAATCTTATAATCGCTATCAAAAATAAACACATCAGGATTTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTGCTTCTAAAATTTCGTCTCCTGATAATCTTTCATTTAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTTCTGCATATTCTTTTATAAGCTTACTGTCTCCAATCGGTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTCTCATCTTCCCACCAGTCATATTTTTCTTTTAATTCTTTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTTATTTTTTTTGCTTGGTCTTTTGCATAACCAAACTCTGAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACCAAATCAAAATTTTTAATTTCAACATGCCTAACTTTTGCCATATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTATTTTTCCTTCTTTGTTCCAATATGTAGAACCACTGTGATCCGAATATAACTACTCTCTGAAAGAGATAGAAACCCTTCACCTACCAATTCCAATACAAAAAATCCTTCTCTAATATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAAGTCGATGAATTTCTTCAAGGTGCTGAAATAATAGAGCACCAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTGGTGTAGGTTGTTCCGAGACCAAAATACTCTACACTATCAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACCACAAATATATACACGCCGAAATATACGTTGGTAATGGATTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACGTCTCCGTATTCTTCTTCTAAGAATTCTTTAATACTCATTTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAGATAAAAGTATTAACAAATCAAGAAATAGAACATCTTGCAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACCCTTTCATACCTCACCACCTCTTTAAATTTTATTTTACAACATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTGCTGTTACATTTACATCTACTCCATGCTTAACGTTCCCTTGATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTATAATCCAGCGAAATCCCTGCTTTTTCTGCAACTTCTTTTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTAACAACTGTAACTCCATATAAATTACTTTTACTTAAATATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAAAAGTTCTCGTGCATCTATTAAATCATCTTTATTCAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTAAGGTTCTTAGGAGGTGTGTTATTAGGTGTCTTACTATTATCCGAATATCACTACTCTCTGAAAGAGATAGAAACGTCAGTGCGTATATACCAGTCATACGCACTATTCGGTGAATATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTTTTTTTCTTTTCATATTTTTCGAGAAGCTTTTCTAACTTCATCCGAATATAACTACTCTCTGAAAGAGATAGAAACAATCATCATTTGAAAATGATATCTAAAATTCAAAAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACATAATTTTATCTTCTACAAATTCATCACTTTCTTTTTTCATATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTAACCTGTATCATCTATGTCTATCCAATTAATATCAAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAATTCATTTTTGAAGCAACTTATTAAATAAAAAATACTTATCCGAATATCACTACTCTCTGAAAGAGATAGAAAG

>NZ_CP009471|2|2|437248-439803|PILER-CR
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	ACCTCACGAATTTCAAATTTTTCGTCAAAACTCCCATCATA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAACCTTGACTTAACTCTATATACATTGATTCTCTTTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TCTTTTAATTCTATATTATCATTTAAATCTATTAATAACAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TCTTCTAATAAATGTTTTTCAAATTCTTTACTGAATTTAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AATTCATCACTACTGTTATTTGTAAATGTATATGTTGGAGT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	ATTATCGACTTTTAATTGAGGCTCTGTTTTCCTCCACTCTA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTTAAACTCACAATTTCGTTGTTTTCCTTCTCGAAACTCTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AGTTGATAGTTATTTGCTATCTTGTAAGATATGTTCAAAAA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAATCTTATAATCGCTATCAAAAATAAACACATCAGGATTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TGCTTCTAAAATTTCGTCTCCTGATAATCTTTCATTTA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTCTGCATATTCTTTTATAAGCTTACTGTCTCCAATCGGT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTCTCATCTTCCCACCAGTCATATTTTTCTTTTAATTCTTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTATTTTTTTTGCTTGGTCTTTTGCATAACCAAACTCTGA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CAAATCAAAATTTTTAATTTCAACATGCCTAACTTTTGCCAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TATTTTTCCTTCTTTGTTCCAATATGTAGAACCACTGTG
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CCTTCACCTACCAATTCCAATACAAAAAATCCTTCTCTAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AAGTCGATGAATTTCTTCAAGGTGCTGAAATAATAGAGCACCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TGGTGTAGGTTGTTCCGAGACCAAAATACTCTACACTATCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CACAAATATATACACGCCGAAATATACGTTGGTAATGGATT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	GTCTCCGTATTCTTCTTCTAAGAATTCTTTAATACTCATTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AGATAAAAGTATTAACAAATCAAGAAATAGAACATCTTGCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CCTTTCATACCTCACCACCTCTTTAAATTTTATTTTACAAC
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TGCTGTTACATTTACATCTACTCCATGCTTAACGTTCCCTTG
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TATAATCCAGCGAAATCCCTGCTTTTTCTGCAACTTCTTTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAACAACTGTAACTCCATATAAATTACTTTTACTTAAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AAAAGTTCTCGTGCATCTATTAAATCATCTTTATTCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTAAGGTTCTTAGGAGGTGTGTTATTAGGTGTCTTACTATT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	GTCAGTGCGTATATACCAGTCATACGCACTATTCGGTGAAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTTTTTTCTTTTCATATTTTTCGAGAAGCTTTTCTAACTTC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	AATCATCATTTGAAAATGATATCTAAAATTCAAAA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	ATAATTTTATCTTCTACAAATTCATCACTTTCTTTTTTCAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAACCTGTATCATCTATGTCTATCCAATTAATATCAA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AATTCATTTTTGAAGCAACTTATTAAATAAAAAATACTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAG

>NZ_CP009471|2|2|437248-439803|CRISPRCasFinder
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	ACCTCACGAATTTCAAATTTTTCGTCAAAACTCCCATCATA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAACCTTGACTTAACTCTATATACATTGATTCTCTTTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TCTTTTAATTCTATATTATCATTTAAATCTATTAATAACAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TCTTCTAATAAATGTTTTTCAAATTCTTTACTGAATTTAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AATTCATCACTACTGTTATTTGTAAATGTATATGTTGGAGT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	ATTATCGACTTTTAATTGAGGCTCTGTTTTCCTCCACTCTA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTTAAACTCACAATTTCGTTGTTTTCCTTCTCGAAACTCTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AGTTGATAGTTATTTGCTATCTTGTAAGATATGTTCAAAAA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAATCTTATAATCGCTATCAAAAATAAACACATCAGGATTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TGCTTCTAAAATTTCGTCTCCTGATAATCTTTCATTTA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTCTGCATATTCTTTTATAAGCTTACTGTCTCCAATCGGT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTCTCATCTTCCCACCAGTCATATTTTTCTTTTAATTCTTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTATTTTTTTTGCTTGGTCTTTTGCATAACCAAACTCTGA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CAAATCAAAATTTTTAATTTCAACATGCCTAACTTTTGCCAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TATTTTTCCTTCTTTGTTCCAATATGTAGAACCACTGTG
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CCTTCACCTACCAATTCCAATACAAAAAATCCTTCTCTAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AAGTCGATGAATTTCTTCAAGGTGCTGAAATAATAGAGCACCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TGGTGTAGGTTGTTCCGAGACCAAAATACTCTACACTATCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CACAAATATATACACGCCGAAATATACGTTGGTAATGGATT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	GTCTCCGTATTCTTCTTCTAAGAATTCTTTAATACTCATTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AGATAAAAGTATTAACAAATCAAGAAATAGAACATCTTGCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CCTTTCATACCTCACCACCTCTTTAAATTTTATTTTACAAC
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TGCTGTTACATTTACATCTACTCCATGCTTAACGTTCCCTTG
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TATAATCCAGCGAAATCCCTGCTTTTTCTGCAACTTCTTTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAACAACTGTAACTCCATATAAATTACTTTTACTTAAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AAAAGTTCTCGTGCATCTATTAAATCATCTTTATTCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTAAGGTTCTTAGGAGGTGTGTTATTAGGTGTCTTACTATT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	GTCAGTGCGTATATACCAGTCATACGCACTATTCGGTGAAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTTTTTTCTTTTCATATTTTTCGAGAAGCTTTTCTAACTTC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	AATCATCATTTGAAAATGATATCTAAAATTCAAAA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	ATAATTTTATCTTCTACAAATTCATCACTTTCTTTTTTCAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAACCTGTATCATCTATGTCTATCCAATTAATATCAA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AATTCATTTTTGAAGCAACTTATTAAATAAAAAATACTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAG

>NZ_CP009471|2|2|437248-439803|CRT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	ACCTCACGAATTTCAAATTTTTCGTCAAAACTCCCATCATA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAACCTTGACTTAACTCTATATACATTGATTCTCTTTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TCTTTTAATTCTATATTATCATTTAAATCTATTAATAACAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TCTTCTAATAAATGTTTTTCAAATTCTTTACTGAATTTAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AATTCATCACTACTGTTATTTGTAAATGTATATGTTGGAGT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	ATTATCGACTTTTAATTGAGGCTCTGTTTTCCTCCACTCTA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTTAAACTCACAATTTCGTTGTTTTCCTTCTCGAAACTCTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AGTTGATAGTTATTTGCTATCTTGTAAGATATGTTCAAAAA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAATCTTATAATCGCTATCAAAAATAAACACATCAGGATTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TGCTTCTAAAATTTCGTCTCCTGATAATCTTTCATTTA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTCTGCATATTCTTTTATAAGCTTACTGTCTCCAATCGGT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTCTCATCTTCCCACCAGTCATATTTTTCTTTTAATTCTTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTATTTTTTTTGCTTGGTCTTTTGCATAACCAAACTCTGA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CAAATCAAAATTTTTAATTTCAACATGCCTAACTTTTGCCAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TATTTTTCCTTCTTTGTTCCAATATGTAGAACCACTGTG
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CCTTCACCTACCAATTCCAATACAAAAAATCCTTCTCTAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AAGTCGATGAATTTCTTCAAGGTGCTGAAATAATAGAGCACCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TGGTGTAGGTTGTTCCGAGACCAAAATACTCTACACTATCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CACAAATATATACACGCCGAAATATACGTTGGTAATGGATT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	GTCTCCGTATTCTTCTTCTAAGAATTCTTTAATACTCATTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AGATAAAAGTATTAACAAATCAAGAAATAGAACATCTTGCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CCTTTCATACCTCACCACCTCTTTAAATTTTATTTTACAAC
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TGCTGTTACATTTACATCTACTCCATGCTTAACGTTCCCTTG
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TATAATCCAGCGAAATCCCTGCTTTTTCTGCAACTTCTTTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAACAACTGTAACTCCATATAAATTACTTTTACTTAAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AAAAGTTCTCGTGCATCTATTAAATCATCTTTATTCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTAAGGTTCTTAGGAGGTGTGTTATTAGGTGTCTTACTATT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	GTCAGTGCGTATATACCAGTCATACGCACTATTCGGTGAAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTTTTTTCTTTTCATATTTTTCGAGAAGCTTTTCTAACTTC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	AATCATCATTTGAAAATGATATCTAAAATTCAAAA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	ATAATTTTATCTTCTACAAATTCATCACTTTCTTTTTTCAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TAACCTGTATCATCTATGTCTATCCAATTAATATCAA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	AATTCATTTTTGAAGCAACTTATTAAATAAAAAATACTT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009471.1\|WP_014295926.1\|449719_450073_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	pfam09701_cmr5gr11_CAS-III-B	gnl\|CDD\|378242
NZ_CP009471.1\|WP_075780258.1\|427502_428180_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP009471.1\|WP_014295909.1\|426544_427501_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|274368
NZ_CP009471.1\|WP_075780259.1\|428190_428853_-\|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl\|CDD\|273990
NZ_CP009471.1\|WP_014295908.1\|425394_426504_-\|Na+/H+-antiporter-NhaD-like-permease	unknown	unknown	gnl\|CDD\|238537
NZ_CP009471.1\|WP_014295916.1\|432384_434556_+\|sodium-translocating-pyrophosphatase	unknown	unknown	gnl\|CDD\|376979
NZ_CP009471.1\|WP_075780264.1\|441595_442600_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP009471.1\|WP_156865379.1\|430449_431319_-\|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl\|CDD\|223646
NZ_CP009471.1\|WP_075780262.1\|435305_436769_+\|DUF2828-family-protein	unknown	unknown	gnl\|CDD\|371536
NZ_CP009471.1\|WP_075780260.1\|428866_429649_-\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224042
NZ_CP009471.1\|WP_075780265.1\|442895_444815_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240017
NZ_CP009471.1\|WP_014295913.1\|429638_430463_-\|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl\|CDD\|223654
NZ_CP009471.1\|WP_156865381.1\|444909_445065_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_014295923.1\|447027_448164_-\|CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	gnl\|CDD\|187873
NZ_CP009471.1\|WP_014295922.1\|445325_447017_-\|DUF1874-domain-containing-protein	csx1	pfam09455_csx1_CAS-III	gnl\|CDD\|378186
NZ_CP009471.1\|WP_083635626.1\|448156_448981_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP009471.1\|WP_075780263.1\|439942_441583_+\|hypothetical-protein	PrimPol	COG4951_PrimPol_CAS-I:CAS-III	gnl\|CDD\|227287
NZ_CP009471.1\|WP_075780261.1\|431332_432163_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS-family-protein	unknown	unknown	gnl\|CDD\|270284
NZ_CP009471.1\|WP_148265128.1\|448964_449723_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|224520
NZ_CP009471.1\|WP_014295920.1\|442600_442879_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856

Protein	Function_ID	Function_description	E-value
NZ_CP009471.1\|WP_014295926.1\|449719_450073_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl\|CDD\|378242	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species.	3.63055e-23
NZ_CP009471.1\|WP_075780258.1\|427502_428180_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.0177e-73
NZ_CP009471.1\|WP_014295909.1\|426544_427501_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	2.61077e-41
NZ_CP009471.1\|WP_075780259.1\|428190_428853_-\|phosphate-signaling-complex-protein-PhoU	gnl\|CDD\|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	2.90961e-50
NZ_CP009471.1\|WP_014295908.1\|425394_426504_-\|Na+/H+-antiporter-NhaD-like-permease	gnl\|CDD\|238537	cd01117, YbiR_permease, Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate sodium, sulfate, arsenite and organic anions. A typical ArsB/NhaD permease is composed of 8-13 transmembrane domains.	3.42496e-55
NZ_CP009471.1\|WP_014295916.1\|432384_434556_+\|sodium-translocating-pyrophosphatase	gnl\|CDD\|376979	pfam03030, H_PPase, Inorganic H+ pyrophosphatase. The H+ pyrophosphatase is an transmembrane proton pump involved in establishing the H+ electrochemical potential difference between the vacuole lumen and the cell cytosol. Vacuolar-type H(+)-translocating inorganic pyrophosphatases have long been considered to be restricted to plants and to a few species of photo-trophic bacteria. However, in recent investigations, these pyrophosphatases have been found in organisms as disparate as thermophilic Archaea and parasitic protists.	0
NZ_CP009471.1\|WP_075780264.1\|441595_442600_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	2.07487e-116
NZ_CP009471.1\|WP_156865379.1\|430449_431319_-\|phosphate-ABC-transporter-permease-subunit-PstC	gnl\|CDD\|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	8.99611e-68
NZ_CP009471.1\|WP_075780262.1\|435305_436769_+\|DUF2828-family-protein	gnl\|CDD\|371536	pfam11443, DUF2828, Domain of unknown function (DUF2828). This is a uncharacterized domain found in eukaryotes and viruses.	4.88586e-97
NZ_CP009471.1\|WP_075780260.1\|428866_429649_-\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	6.2149e-163
NZ_CP009471.1\|WP_075780265.1\|442895_444815_+\|hypothetical-protein	gnl\|CDD\|240017	cd04659, Piwi_piwi-like_ProArk, Piwi_piwi-like_ProArk: PIWI domain, Piwi-like subfamily found in Archaea and Bacteria. RNA silencing refers to a group of related gene-silencing mechanisms mediated by short RNA molecules, including siRNAs, miRNAs, and heterochromatin-related guide RNAs. The central component of the RNA-induced silencing complex (RISC) and related complexes is Argonaute. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the 5' anchoring of the guide RNA and the other, the catalytic site for slicing. This domain is also found in closely related proteins, including the Piwi subfamily, where it is believed to perform a crucial role in germline cells, via a similar mechanism.	4.79032e-15
NZ_CP009471.1\|WP_014295913.1\|429638_430463_-\|phosphate-ABC-transporter-permease-PstA	gnl\|CDD\|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	1.43516e-79
NZ_CP009471.1\|WP_014295923.1\|447027_448164_-\|CRISPR-associated-protein	gnl\|CDD\|187873	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems; also known as APE2256 family.	1.6829e-10
NZ_CP009471.1\|WP_014295922.1\|445325_447017_-\|DUF1874-domain-containing-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	1.79529e-33
NZ_CP009471.1\|WP_083635626.1\|448156_448981_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	8.0964e-14
NZ_CP009471.1\|WP_075780263.1\|439942_441583_+\|hypothetical-protein	gnl\|CDD\|227287	COG4951, COG4951, Uncharacterized protein conserved in bacteria [Function unknown].	2.03975e-17
NZ_CP009471.1\|WP_075780261.1\|431332_432163_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS-family-protein	gnl\|CDD\|270284	cd13566, PBP2_phosphate, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBPII superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.76707e-92
NZ_CP009471.1\|WP_148265128.1\|448964_449723_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|224520	COG1604, COG1604, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.54549e-41
NZ_CP009471.1\|WP_014295920.1\|442600_442879_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.13907e-26

>NZ_CP009471.1|WP_075780262.1|435305_436769_+|DUF2828-family-protein
MNKNFMEALKEEGNVYYTGNGALSLKNSGNSLVDFFYRCGILMNQPKRFEELFLNAFAEDKEKAIKILFYSRDVRGGQGVRRTFRHILKKLGNLYPEIAVQIIKYVPEYGRWDDLYAFVGTKVETEAFEFMYKQIIEDVKNYKDNKPISLLAKWLKSENTSSKHSVKLAKITRKYFKMDSKTYRKMLSELRKYIKIVERDMSENKWDNIEYEIVPSRAMKKYHRAFYKHDAERYEKYLEEVKNNKKKINAGTLYPHDIVKMVLKEENETAEMLWKNLPDYGIEEDAIAVVDTSGSMYGCGESLIPITVAVSLGIYFAERNKGKFKNYFITFSEKPELQEIKGETLYEKVQTLSQAYWDANTNIIKVFELILETAKKGGYTIEDIPEKIYIISDMQFDMAVSDNSKTNFEAIKEMYEKAGYPMPQLIFWNVSSYGNDVPVKFDENGTALISGYNPVILKYILTGKDINPFEIMENVINSERYKNIHIN
>NZ_CP009471.1|WP_014295916.1|432384_434556_+|sodium-translocating-pyrophosphatase
MLLYLLITVPLLALLFAMYNYRSVLKLDEGTERMSEIALAIREGTRTFINHEYTTVGIYIVFISIILAIVTDINTGIAFVIGAIMSGSAGYVGMKMATYANVRVSNSARTTKNIGKTLKVAFQGGSVMGLSVAGFALLGLIIIYIIFGKWQGLLNIENIKVIRNWLGISYIPFAMVISGYALGCSVIAMFDRVGGGIYTKAADMGADLVGKTELALPEDDPRNPATIADNVGDNVGDVAGLGADLLESYIGAIISSVILILYASFILSKNNSIISYETTYKLIVYPVIFAIMGLIGAMLGIFYVIKKKSTDNPHKELNTSLLFSATFTGIFTLIAGYYYLKDLPQNELKLLGFKYGIFSPWLSAMLGIISGIIIGLLAEYYTSDKYKPTQELATFAKGGPAIIISKGMALGMKSVLYPVFMLMFGILLANYFSGLYGVAMAAMGMLSFVAATVSVDSYGPIADNAGGISEMAELDPEVRKITDMLDSVGNTTAAIGKGFAIGSAAFAALSLFASYVYSQINPDMAVDLKTLLNINLISPRTIAGALFGAALPFYFSAYLIDAVVNAAEKMVEEIRRQFREIPGLMEGKNKPDYNKCIKISSEGALKEMKTPALIAVLTPIISGFIFGTEFVGGLLAGTTFSGVMLAIYTANAGGAWDNAKKYIENNNLEGEGKGTEAHKASVVGDTVGDPLKDTVGPSLDILIKIMAVTSLITVSVFKIYHLF
>NZ_CP009471.1|WP_075780261.1|431332_432163_-|phosphate-ABC-transporter-substrate-binding-protein-PstS-family-protein
MKKSIGLFLVLVLAILGKGFAERLIIKGSNTVFPIAQLWIEELKKNNPEIEITLEGAGSSTGIAALFNGTTDIANASRFLKKKEIDKMNREGLYFAPIVVGYDGIAIIVNPRLKINNITLKTLKGIYTGKLRTWNQVDPNLPKKRIVIYSRNTASGTFETFEKKVLDGEKMFPTVKMVESTQFEIDQVARNPYAIAYVGVGYVSEKVKVLTVEGVKPTKLNILTAKYPISRPLYMFIDVTNGWPESGPVKEYITFGLSKKGQELVEKAGYVAAYGF
>NZ_CP009471.1|WP_156865379.1|430449_431319_-|phosphate-ABC-transporter-permease-subunit-PstC
MRELKDKLNFMLINITAFLGIGALILIFVFIIHESIPALKSAGIEIFTSFNWYPTYDEPEYGILTMLINSILLTIFTSLIVIPLGYIVAFFMYEYAKPLEKRLIKSAIDLLSGVPSVIIGMFLVIYLSPLMLEIGAWSPENMLLAVSGLVLLSFPYTASLMEEALSSVDKSLKEGALALGSTRFTAVFKIVTLAALPGIVNSIILTINRVIGETMVVLMAAGGANMLPQSIFDPVRPLTAAIASEMGEVEIGSIHYSALFVSGLVLLVISVILTISSKNFVRSYENGKR
>NZ_CP009471.1|WP_014295913.1|429638_430463_-|phosphate-ABC-transporter-permease-PstA
MARDKVVSVVFRSISYLLFVIVFIIFAFVIFDGIRFFSFGFFIQFPKDMMTEGGIFPAILGSFYLLFLTLAISIPVGVLTGIFLSEYGDNRIGRLLDIAITSLSGVPSIVFGLFGLALFSITMGLKTSLISGALTLSVMALPIISSATKEALKAIPDVLRESAYALGAKKTEMIFKVILPAAKSRILTAVLIGSGRVMGETAPVLLTAAVFYSTQLPGSIKDPVMTLPTHIYNIVMAYGADAQWMAKGTASVLMIVVLIIYSFAFRLRRKINGN
>NZ_CP009471.1|WP_075780260.1|428866_429649_-|phosphate-ABC-transporter-ATP-binding-protein
MATETIIKSCNDIITVRNFNAWYGVKQALKDVNITIKENKISAIIGPSGCGKSTLLRSINRMNDTIPEYRISGEICFEGKNIYDSKIDLTIYRKKVGMVFQKPVPFPMSIYENVAFGLKIHGVKDKQKIDEIVEISLRKAALWKEVKDELHKSALALSGGQQQRLVIARALAVDPEVILLDEPTSALDPIATQRIELLLEELSEKYTIVIVTHNLSQAIRISDYLYFMYQGELIESGKTSEIIENPQNQLTEDYLNGRIG
>NZ_CP009471.1|WP_075780259.1|428190_428853_-|phosphate-signaling-complex-protein-PhoU
MKNIHHFENEILILKADISKMLSLILESFNMSIKALEGNDKMLAKRVLDLDDKIDNLNRKIEEEVYQLIARYNPLAKELRYIITMIKFSNNLERIGDLSCNIAQKTFEFEELNEHAKLNENMLKMIGLSLEMLKEVFRAFNERNIELAIEIWKKDNIIDELEIENRKNILEDFKNGKYDERSIIPYVLIARDIERISDQVTNLCEEIVYIEKGEEILKYI
>NZ_CP009471.1|WP_075780258.1|427502_428180_-|response-regulator-transcription-factor
MASILIVEDDSDIREILRTYLEIEKYDVFEVEDIQEMKAFLSKNRVDIILLDIMLPDGDSVEILPYIRSANRNTGIIIVSAKNTDRDKIYGIESGADDYVTKPFNPREVVARVRALLKRLKNEDEKLEFGPLEIFSGNYVVKHKNNVIDLTAKEFEILLLLAKNNKKIFSREEIIDRIWFDSDYITDRVVDVHISMIRSKIGKGWIKTVRNFGYKFNPQAWEVEE
>NZ_CP009471.1|WP_014295909.1|426544_427501_-|two-component-sensor-histidine-kinase
MDTKILDFIEEAYIELDKIKVKEINKSAMDFGFKKGIELINIITFNEIDEFIKAIINNEDFEIETTVYFFQGESKYCFLKYLSNYNVLIIKDQTEKELVKKVKSDFITSLSHEIRTPLSVAKGNIYLAMDILNDNEAIKPLKKVRDSINKIERILDQLTLLSLAEFENYVLKFEIFDPQKIFEDVKNDLEEKIKRKNVSIDLDLNVEMLKGDPFVIYTILRNLISNAVKYSYENSRVYVSIFEDKIIVKDEGIGIRDEEKERVFERFYRGVDAKKYARGSGLGLAIVKYLCNLAGYKIEYNSQWMVGSTFIIHLNTDM
>NZ_CP009471.1|WP_014295908.1|425394_426504_-|Na+/H+-antiporter-NhaD-like-permease
MVIAIDRVKKYIMEEKLIVFLFVFLIIISFMYKISPVQYPELINWKTIFFLSGLLLITKSIELSNYFHHIAIFMVKKAHYERNLVYFLIIISTFLAMILTNDITLFIVIPLTIKLKKLVNFDFSRIIILEIIAVNIGSSLTPIGNPQNIFIWHNYGTGVFNFILKMMPFFLLEFFLLIVYATFLVKNKKMEIVISDEKYDNNAFFNSLIILLMYIISSNYEDFFYLFLGVIFVYYLITKKSVISKCDWNIILLFILFFINFNILSMIPEIKYFIEHFGLNNGKNLFLFSTGLSQIISNVPATIFLSNYTDNWYYLSYGVNLAGTGFIIGSLANIIGLRISKIENGMKTYHKYAIPYFLISLLLISLIIK
>NZ_CP009471.1|WP_075780263.1|439942_441583_+|hypothetical-protein
MNFKELAFKAEEDFDFEKAIEYYQKAFNELSIKDNSLVRYAYLLFDFQKFEEAEPIFEKIVSEINDSEYMSKLAIIYEENNKFEKALKIYKELGIESKVKELSDKIELKAPSQNAIKRFMTLFSGREDVFSIQYEGGYRPIRRPLNFQDIKNHFSGKKTLGIYLLKKNDTVKFAAYDIDIKKHYLNREDKFVYEENSKKVAKRLSRELNLENITHYFEFTGNRGYHIWIFFDIPVSAYKIKYIMEKILDRIELEEGIDVEIFPKQTSLNGGLGNLIKVPLGVHKKTGKKCLFVDNDFNVIENQIEFLNNIKENKATEINKLFREIFNENDYDDFNVTYKKRTTSSKNSASKKIKSSIRKTLPKSNKNIFTQMIEGCHILKQINEKIEKEAYITEEEEMIFIKSLANLENSKKFIEMKLSQTINFSKKRIDMIIKQSLGVPITCEEIRKIILNKDISLSLENCTCKFQGNYNSPYAIVENIEEMFLDKIDINDIAKKIVEKNAEKFEIEKEIKNLKRMIAKKMGDSKELRTEIGTIKRFGDDIEIIL
>NZ_CP009471.1|WP_075780264.1|441595_442600_+|CRISPR-associated-endonuclease-Cas1
MILYITEQGAVLSKREGRLVISKENSIISEIPLNKIEKINLMGNISLTTPIISYFLDHEIEVIFMTKTGKYRGKLYTDEYRNVLLRLKQYERSYDEKFKLKISKAIVKGKLKNSYDFLINRSRYLPKGTLSKEIASIRKIIEKVDKGKDIDEVRGFEGIGSKYYFEGFKKLIKNENFKFKKRIMHPPRDPVNAMLSFGYYLLYNEVMAAINIVGLDPYFGNLHTIEISKKSLLFDLVEEFRNIIIDNFILKLINRNEISKDDFNKKDENIIYFTDEGMKKFISKYEEMISQKMRYHLDEETNYIRTIFQKQARHYARVVIGDEEEYIPFYRVGN
>NZ_CP009471.1|WP_014295920.1|442600_442879_+|CRISPR-associated-endonuclease-Cas2
MFYVVSYDITNDKRRRKVVKYLESYGVRVQYSVFETELNQDQLKKLIKGLKKQIKKDEDTIRIYPISKESRRYIVTIGIDKGKYYDKDFLII
>NZ_CP009471.1|WP_075780265.1|442895_444815_+|hypothetical-protein
MYLNLYKIDIPKKIKRLYFYNPDMEPKLFARNLSRVNNFKFQDSNDLVWIEIPDIDFQITPKNVFQYKVEKEEIIKEEEDKKLFIKTLYKFIKKLFLDNDFYFKKGNNFISTTEVFSLDSNENVNAHLTYKIKIHNISNEYYLSILPKFTFLSKEPALESAIKSGYLYNIKSGKSFPYISGLDGILKIDIGNNQIVEVAYPENYLFNFTTRDAEKYGFSKEVHEIYKNKVFEGFKKIPKTLGFLNKITNLNENYQLKDGYKIFINVIYKFKNGESRYAKDVFKYSFYKNEQPLKAIFFFSSKKQFFEVQKSLKELFHNKHSVFYRAAAELGFSKVEFLRDSKTKSSAFLYNPEEFTVKNTEFINQIEDNVMAIVLLDKYIGNIDPLVRNFPDNLILQPILKEKLEDIKPFIIKSYVYKMGNFIPECKPFILKKMEDKEKNLYIGIDLSHDTYARKTNLCIAAVDNTGDILYIGKHKNLELNEKMNLDILEKEYIKAFEKYIEKFNVSPENVFILRDGRFIEDIEIIKNFISYNDTKYTLVEVNKNTNINSYDDLKEWIIKLDENTYIYYPKTFLNQKGVEVKILENNTDYTIEEIIEQIYLLTRVAHSTPYTNYKLPYPLHIANKVALTDYEWKLYIPY
>NZ_CP009471.1|WP_156865381.1|444909_445065_-|hypothetical-protein
MKSYKDLMQELLEDEKFREIHFKKEALHHFLDEIVKDEKKKGKFIEALNLL
>NZ_CP009471.1|WP_014295922.1|445325_447017_-|DUF1874-domain-containing-protein
MEKILLLSFLGKGRYNESLYYRLEAENKKAKSYLSPLANAYLEKERGNDVEIKFFITKEVKENFLENPNSEHGQNINNEINNLHQKGISVTFENIPEGRNYNELEEIISIIKKSISEFSEKEIIFDLTHGLRHISTFTTGVIFYLKNLQQDFEEKNIILYYGAYDIRKEFKNKPPEVPILNISSTLELSNLTLALEEFKEYGITKRIEKALRNIQKLVATNKLCNVNKLKFSSLSTELSNFNNIIKIPASPEKIINSILKIKEILDNSIIEFRNCSKSTEKLFFIEPINYFLATLRKIIVEDLFYNIDSIKNDNTLTREKIIFMANFIKLLLKWEMYSEAMIQIRELLIDLHLLAKGQILYYDDKEKRERIFWEDSLKRNEIAERLDKLTKNIIDTRNKIAHAGRGTDDFKKENLKKLLLSYVREIEELSNNIELFEKKEATLKRKVYLLNSIIIPLSKDSETGNFDIEKITKEKFYNFLKNALNEQTLDSAIGHDSIKHFIKEQFDLDIPLERKEIYFAPGEEAIVIKLEKRPEEGKIYTKEEMDYMEENNLIGYYYIKRKF
>NZ_CP009471.1|WP_014295923.1|447027_448164_-|CRISPR-associated-protein
MYSNIVLTGGKSILGKFNLLGKFIEDNNIEHVKNLKSEDVEKWIEKVKVAFQNSKSDPKKVSVEYSLVHTLKEMNKLANNPDISIIHTNTKEGIISAKLNEYIFRKDFNANVILKGVDFDINDRIKLNKQYGEFMDILVTELQKGNIYNTFFSPTPGYKVMSYLGYVAGSFYGYKMGYLYEEGSVFQEVPPIPIKFDIEESIDYLYLIKEIQESEIKYNSLSKMEQEFIDNHTYFFDTIDGVVVLNAFGLFLFKNILTTEIFISDELKEMWDKLDNDKRKFVKTQIFELIRKIKLFKSNNNSYKGELMHNKSWEGKRFNKPYLYKSITGNIFRAVWDTDENKLNLYYIWLDHDKYEREYEKIMQKYQDYKCKNLLELI
>NZ_CP009471.1|WP_083635626.1|448156_448981_-|CRISPR-associated-endoribonuclease-Cas6
MLIEGDTIFYSIVIELKALESGVIPTFPGKKIHGLFFNILKDVDKEISYKLHEDKNYKPFTVSSFLGKKIDEPVTILKGKRYYIRMTFLEEKIFILFTTKIFKNKIFKEKINIEDISFSIIRIIFDKEHSKWANLLTIDDLLKENYDNKISLTFITPTLFKTGDKHLRYPDPEKIFNSLLIKFNKYSPYKLNEKVKEKFNTIKIIQRKTHLKYIYFPNFYLQGFTGNVVFEIPEDNYELKKTANILSDFAFYAGVGYKTTMGLGQTRREEPVNV
>NZ_CP009471.1|WP_148265128.1|448964_449723_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MNLKYYTNYKPENLKNASLYYDKFVYHEANPEDLKKIKDDYKDILINLDKNIIKKNIEIIKNIRIQMINKIKKHYNVKTYIVKNKTPFLIGAGIPSIDEIGFYWSRNYGLPIIPGTSIKGAFRKYIESNNDLKSIIDVVFGNAEKKGYIDFLDAIPINTIKLNIDYQTPHFQEYYMNNQPPNDVYNPIPLNYLNVSNGTFRIDLLISADSNEVINIINIHFKYFLEYFGIGAKTSMGYGRFKIQELSNFDRR
>NZ_CP009471.1|WP_014295926.1|449719_450073_-|type-III-B-CRISPR-module-associated-protein-Cmr5
MKRENSTKLLAKKFVIQKINKKYKDDYRSLIKGLGSMIIQNGLYGTLVFLKAKNKDHHKAVFNDIEQYLKEKGLFKGEDLLTFLENTEELSTIQEKVLEFTNWYRRYVDIFIQTGGE

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Crispr_ID: NZ_CP009471_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009471_3

456273-458309

TypeIII

Consensus_repeat	Method
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	PILER-CR
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CRISPRCasFinder
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CRT

26 spacers

cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas6,csm6,csx1

The CRISPR arrays of NZ_CP009471_3

>merge|NZ_CP009471|3|456273-458309|PILER-CR,CRISPRCasFinder,CRT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTACTTGAAATTTTCATAAACATTATAAATATAATATCCAAGATCCGAATATAACTACTCTCTGAAAGAGATAGAAACATATAAAAGATGTCAATACAAAAAAGATATTAACTATACTATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTATTTATACCATACTCGAAATTTAAAGCCTCTTTCAACAGGATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTCTTATTCATTTTTCTGGTGCGTGACCAGTTTCTTCTTTTATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTAAAACTTTAATTTATTTATCAAAGATGTATTATTTACACCATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTATTGCTGTAGTCCTCAGATTTTCAAATGTATCTTCTAACATATCCGAATATAACTACTCTCTGAAAGAGATAGAAACGTCCCTTTTTCTATCCCACTAAATGTTGTGATTGTTAATTCATCCGAATATAACTACTCTCTGAAAGAGATAGAAACACATAAGCATAGAACGTAACAAAATCAAAGCGCTCCCTTATATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTTTTCTCTCACCTCTACAAGAGCTTATATCGCTATGCCTGTATCCGAATATAACTACTCTCTGAAAGAGATAGAAACAGCTTGAGGAAAGCTGAGGTTTGGGAACGTCCTTCGGCTTTATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTATCTACTACTACTTTAAAATCGATATTTATGATAAATCCGAATATAACTACTCTCTGAAAGAGATAGAAACCCTTTCATAACCCTTTCATCTTTTAATTCTTCGCTTAACATATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTGCTGATATTTCTAACCTGCTTCTAAAATTTTCAAGGATATTATCCGAATATAACTACTCTCTGAAAGAGATAGAAACATCCATTTGATTGAATACTAAAAAATCTCTTTCGTATTTTAAATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTAAAATTCATCTTCTCCATTTTCAATTGCATCTATTATTTCATCCGAATATAACTACTCTCTGAAAGAGATAGAAACCCTACTTATTAGGAGGTGGCCTTTGCTTGCCACTTTTCCAAATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTATTTTTTCATCAATTGTTTTGTGTATTCAGTCATGTCTTTTTCAATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTTGACAGGTTTGGTGAACCATACTGTCAAATTTCCCTCGTAATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTTCATCATCTTCAATATATTCTCTCATTTTGTGATATTCTTATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTTGTTGAACCTTTTTCGAAGCCTTCAACGAAGGCTTCTCTATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTTGTTGAACCTTTTTCGAAGCCTTCAACGAAGGCTTCTCTATCCGAATATAACTACTCTCTGAAAGAGATAGAAACCTTTGTTTGTCTCCTTCTTTGTAGATATAAGGTAAATCAATATCCGAATATCACTACTCTCTGAAAGAGATAGAAACCAAAGGTTCATAAACATCACTGCTTCTTGTGCTGTAATATTATCCGAATATAACTACTCTCTGAAAGAGATAGAAACCTTTGACCTGATTAGCCCACACATCTTCATCTATAGCTCTCAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTTCAGCGATCATAACCTCTTTTCTTATCATTCCAGGTTCAATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTCCGATAAATCTTTTCTAATTGTATTCTGTAATTTTTTATTATCCGAATATCACCACTCTCTAAAAGAGACAAAAAA

>NZ_CP009471|3|3|456273-458232|PILER-CR
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TACTTGAAATTTTCATAAACATTATAAATATAATATCCAAG
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	ATATAAAAGATGTCAATACAAAAAAGATATTAACTATACT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATTTATACCATACTCGAAATTTAAAGCCTCTTTCAACAGG
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TCTTATTCATTTTTCTGGTGCGTGACCAGTTTCTTCTTTT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TAAAACTTTAATTTATTTATCAAAGATGTATTATTTACACC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATTGCTGTAGTCCTCAGATTTTCAAATGTATCTTCTAACAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	GTCCCTTTTTCTATCCCACTAAATGTTGTGATTGTTAATTC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	ACATAAGCATAGAACGTAACAAAATCAAAGCGCTCCCTTAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTTTCTCTCACCTCTACAAGAGCTTATATCGCTATGCCTGT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	AGCTTGAGGAAAGCTGAGGTTTGGGAACGTCCTTCGGCTTT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATCTACTACTACTTTAAAATCGATATTTATGATAA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CCTTTCATAACCCTTTCATCTTTTAATTCTTCGCTTAACAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TGCTGATATTTCTAACCTGCTTCTAAAATTTTCAAGGATATT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	ATCCATTTGATTGAATACTAAAAAATCTCTTTCGTATTTTAA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TAAAATTCATCTTCTCCATTTTCAATTGCATCTATTATTTC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CCTACTTATTAGGAGGTGGCCTTTGCTTGCCACTTTTCCAA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATTTTTTCATCAATTGTTTTGTGTATTCAGTCATGTCTTTTTCA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTGACAGGTTTGGTGAACCATACTGTCAAATTTCCCTCGTA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTCATCATCTTCAATATATTCTCTCATTTTGTGATATTCTT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTGTTGAACCTTTTTCGAAGCCTTCAACGAAGGCTTCTCT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTGTTGAACCTTTTTCGAAGCCTTCAACGAAGGCTTCTCT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CTTTGTTTGTCTCCTTCTTTGTAGATATAAGGTAAATCAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CAAAGGTTCATAAACATCACTGCTTCTTGTGCTGTAATATT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CTTTGACCTGATTAGCCCACACATCTTCATCTATAGCTCTCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTCAGCGATCATAACCTCTTTTCTTATCATTCCAGGTTCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC

>NZ_CP009471|3|3|456273-458309|CRISPRCasFinder
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TACTTGAAATTTTCATAAACATTATAAATATAATATCCAAG
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	ATATAAAAGATGTCAATACAAAAAAGATATTAACTATACT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATTTATACCATACTCGAAATTTAAAGCCTCTTTCAACAGG
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TCTTATTCATTTTTCTGGTGCGTGACCAGTTTCTTCTTTT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TAAAACTTTAATTTATTTATCAAAGATGTATTATTTACACC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATTGCTGTAGTCCTCAGATTTTCAAATGTATCTTCTAACAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	GTCCCTTTTTCTATCCCACTAAATGTTGTGATTGTTAATTC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	ACATAAGCATAGAACGTAACAAAATCAAAGCGCTCCCTTAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTTTCTCTCACCTCTACAAGAGCTTATATCGCTATGCCTGT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	AGCTTGAGGAAAGCTGAGGTTTGGGAACGTCCTTCGGCTTT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATCTACTACTACTTTAAAATCGATATTTATGATAA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CCTTTCATAACCCTTTCATCTTTTAATTCTTCGCTTAACAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TGCTGATATTTCTAACCTGCTTCTAAAATTTTCAAGGATATT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	ATCCATTTGATTGAATACTAAAAAATCTCTTTCGTATTTTAA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TAAAATTCATCTTCTCCATTTTCAATTGCATCTATTATTTC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CCTACTTATTAGGAGGTGGCCTTTGCTTGCCACTTTTCCAA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATTTTTTCATCAATTGTTTTGTGTATTCAGTCATGTCTTTTTCA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTGACAGGTTTGGTGAACCATACTGTCAAATTTCCCTCGTA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTCATCATCTTCAATATATTCTCTCATTTTGTGATATTCTT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTGTTGAACCTTTTTCGAAGCCTTCAACGAAGGCTTCTCT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTGTTGAACCTTTTTCGAAGCCTTCAACGAAGGCTTCTCT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CTTTGTTTGTCTCCTTCTTTGTAGATATAAGGTAAATCAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CAAAGGTTCATAAACATCACTGCTTCTTGTGCTGTAATATT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CTTTGACCTGATTAGCCCACACATCTTCATCTATAGCTCTCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTCAGCGATCATAACCTCTTTTCTTATCATTCCAGGTTCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TCCGATAAATCTTTTCTAATTGTATTCTGTAATTTTTTATT
ATCCGAATATCACCACTCTCTAAAAGAGACAAAAAA

>NZ_CP009471|3|3|456273-458309|CRT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TACTTGAAATTTTCATAAACATTATAAATATAATATCCAAG
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	ATATAAAAGATGTCAATACAAAAAAGATATTAACTATACT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATTTATACCATACTCGAAATTTAAAGCCTCTTTCAACAGG
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TCTTATTCATTTTTCTGGTGCGTGACCAGTTTCTTCTTTT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TAAAACTTTAATTTATTTATCAAAGATGTATTATTTACACC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATTGCTGTAGTCCTCAGATTTTCAAATGTATCTTCTAACAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	GTCCCTTTTTCTATCCCACTAAATGTTGTGATTGTTAATTC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	ACATAAGCATAGAACGTAACAAAATCAAAGCGCTCCCTTAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTTTCTCTCACCTCTACAAGAGCTTATATCGCTATGCCTGT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	AGCTTGAGGAAAGCTGAGGTTTGGGAACGTCCTTCGGCTTT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATCTACTACTACTTTAAAATCGATATTTATGATAA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CCTTTCATAACCCTTTCATCTTTTAATTCTTCGCTTAACAT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TGCTGATATTTCTAACCTGCTTCTAAAATTTTCAAGGATATT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	ATCCATTTGATTGAATACTAAAAAATCTCTTTCGTATTTTAA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TAAAATTCATCTTCTCCATTTTCAATTGCATCTATTATTTC
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CCTACTTATTAGGAGGTGGCCTTTGCTTGCCACTTTTCCAA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TATTTTTTCATCAATTGTTTTGTGTATTCAGTCATGTCTTTTTCA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTGACAGGTTTGGTGAACCATACTGTCAAATTTCCCTCGTA
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTCATCATCTTCAATATATTCTCTCATTTTGTGATATTCTT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTGTTGAACCTTTTTCGAAGCCTTCAACGAAGGCTTCTCT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	TTGTTGAACCTTTTTCGAAGCCTTCAACGAAGGCTTCTCT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CTTTGTTTGTCTCCTTCTTTGTAGATATAAGGTAAATCAAT
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	CAAAGGTTCATAAACATCACTGCTTCTTGTGCTGTAATATT
ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	CTTTGACCTGATTAGCCCACACATCTTCATCTATAGCTCTCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TTTCAGCGATCATAACCTCTTTTCTTATCATTCCAGGTTCA
ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	TCCGATAAATCTTTTCTAATTGTATTCTGTAATTTTTTATT
ATCCGAATATCACCACTCTCTAAAAGAGACAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009471.1\|WP_014295926.1\|449719_450073_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	pfam09701_cmr5gr11_CAS-III-B	gnl\|CDD\|378242
NZ_CP009471.1\|WP_014295929.1\|451887_454248_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_CP009471.1\|WP_014295928.1\|450923_451901_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP009471.1\|WP_075780277.1\|471531_472203_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP009471.1\|WP_075780267.1\|454244_455498_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|224286
NZ_CP009471.1\|WP_075780275.1\|468760_469273_+\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876
NZ_CP009471.1\|WP_075780272.1\|464031_466356_-\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|223343
NZ_CP009471.1\|WP_075780274.1\|467848_468733_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_075780278.1\|472199_473198_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP009471.1\|WP_075780270.1\|460955_463148_-\|DUF4230-domain-containing-protein	unknown	unknown	gnl\|CDD\|379417
NZ_CP009471.1\|WP_148265128.1\|448964_449723_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|224520
NZ_CP009471.1\|WP_156865381.1\|444909_445065_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_075780269.1\|460097_460838_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP009471.1\|WP_014295923.1\|447027_448164_-\|CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	gnl\|CDD\|187873
NZ_CP009471.1\|WP_075780273.1\|466487_467852_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_014295922.1\|445325_447017_-\|DUF1874-domain-containing-protein	csx1	pfam09455_csx1_CAS-III	gnl\|CDD\|378186
NZ_CP009471.1\|WP_014295927.1\|450082_450910_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NZ_CP009471.1\|WP_075780271.1\|463144_464011_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225628
NZ_CP009471.1\|WP_075780268.1\|458372_460040_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|313108
NZ_CP009471.1\|WP_083635626.1\|448156_448981_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848

Protein	Function_ID	Function_description	E-value
NZ_CP009471.1\|WP_014295926.1\|449719_450073_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl\|CDD\|378242	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species.	3.63055e-23
NZ_CP009471.1\|WP_014295929.1\|451887_454248_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	6.32108e-85
NZ_CP009471.1\|WP_014295928.1\|450923_451901_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.55475e-57
NZ_CP009471.1\|WP_075780277.1\|471531_472203_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	9.81743e-24
NZ_CP009471.1\|WP_075780267.1\|454244_455498_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|224286	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.19603e-24
NZ_CP009471.1\|WP_075780272.1\|464031_466356_-\|trypsin-like-serine-protease	gnl\|CDD\|223343	COG0265, DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones].	3.45166e-29
NZ_CP009471.1\|WP_075780278.1\|472199_473198_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	3.7743e-121
NZ_CP009471.1\|WP_075780270.1\|460955_463148_-\|DUF4230-domain-containing-protein	gnl\|CDD\|379417	pfam14014, DUF4230, Protein of unknown function (DUF4230). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 203 and 228 amino acids in length.	6.53283e-05
NZ_CP009471.1\|WP_148265128.1\|448964_449723_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|224520	COG1604, COG1604, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.54549e-41
NZ_CP009471.1\|WP_075780269.1\|460097_460838_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.25398e-28
NZ_CP009471.1\|WP_014295923.1\|447027_448164_-\|CRISPR-associated-protein	gnl\|CDD\|187873	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems; also known as APE2256 family.	1.6829e-10
NZ_CP009471.1\|WP_075780275.1\|468760_469273_+\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	6.49366e-08
NZ_CP009471.1\|WP_014295922.1\|445325_447017_-\|DUF1874-domain-containing-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	1.79529e-33
NZ_CP009471.1\|WP_014295927.1\|450082_450910_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.02789e-68
NZ_CP009471.1\|WP_075780271.1\|463144_464011_-\|hypothetical-protein	gnl\|CDD\|225628	COG3086, RseC, Positive regulator of sigma E activity [Signal transduction mechanisms].	0.00213655
NZ_CP009471.1\|WP_075780268.1\|458372_460040_+\|AAA-family-ATPase	gnl\|CDD\|313108	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase. This family contains many hypothetical bacterial proteins. This family was previously the N-terminal part of the Pfam DUF1703 (pfam08011) family before it was split into two. This region is predicted to be an AAA-ATPase domain.	5.74106e-63
NZ_CP009471.1\|WP_083635626.1\|448156_448981_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	8.0964e-14

>NZ_CP009471.1|WP_075780267.1|454244_455498_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MNILEFELLTTSPMFASRDGKTFSLTPQSVRGVMRFWFRAVVPRVIDIHYYNGERKPYIGLKKAEELIFGSTERKSSFDVIVDLISPTNITNNHDYFTFARINKRNRKINYIYGIYGVEEREFLKEKSKLNITFIIKKQPDKLLNIIINLMNLISLVSGFGAKTRKGFGSFKIELIKTNKENSSEIKNSVKNILNELDENLKRYFSSISDTHFKYSQTEFLDIPEFPVLLSDPKTYRVVSTKKSPIKNFSDIYKKLYATEMQESKKGVYIKVKKKLRTLNNTESFTNALREVEASSKNTIESNIIFYQALMGLPINYKYNITSKKLRNYKGNEYTLTNGERKASPFFFSFHLNEKNEYYVRILMITSKISLNNKIYFEGRRNKLITESPESFEIYNQAMDIFKKEVEKKLTNKGEKK
>NZ_CP009471.1|WP_014295929.1|451887_454248_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MNWEKKIIALLHDPIEKALNLEKHENIANRRLNKLGTYLKDDYKNPDYLSSAADRILFPKEKEHFSKRISINIYHYPEYLHPLNGEKLEDYFKNDFKQKIDKLNSEKITDKLEKLEDFKKTYYKTWWELPEQTELSFMLPGDTRIPSHSIIDHLDSASAMSVSNKMSLLLVSIGPVQEFIAAARKTIDLKVGSYMLSYLTFQGIKVIGEEYGYDNVIFPYMRGNYFVKKEFEKIGIFVETSADPGVASLPNIFTAIVPTKDLEKIKSKIKKAIKDEMSNISQFIKIYIEDLIQSEKKYKETIFQKLEAFKNWDKQISQFPIIITVDQEINNIEKYIEKHYIYTEDENIKKLYQKMKQLESTYQMKDIAFYGMYSELLGIKSSLRKTTRDFIQLFEDDVVNGDDLSGANKAVIEIIDKDEKKERLSALSAIKRLFVEYLNEIGYKEAYEKLKYVKSTEEIAGKYKLAVLLMDGDNMGKWISGTLAPSFKKRLHSKVIKELEREDKEYTKLLENINLVTPSYQRMISRTLNNFSNFVPKVVEEFDGLLIYAGGDDVLALFPSNKVFDAANKLRKVYSGIGEEKVGEYVFKNGWCYKKEKNLEYPVFNMMGKQATMSAGIVISKHNFNLKLALNKAREMEKLAKSNEEKSGRKKDSFAIATIRRSGQINISKSFWELNRFDILLKGLEFIKDFEKEKSIKNIILRLKSEYINYCFDEFGNEILTIEDFKNNIIPFLEKRMEIKKDKLKNSFVKLITLNERFLTGNKLMEYFNTLENIEYARRENIYEKN
>NZ_CP009471.1|WP_014295928.1|450923_451901_-|type-III-B-CRISPR-module-associated-protein-Cmr3
MKKIKTLFIKPVDWVGFRKSKTFSHAEETIFPNPKTFYGAIMTAYMRKKNLTQEEIEQIIKDKKLKIIGPFLTDSESNIYFRMPAIIKQNDITKEFYKGEIDETFTFNLNGKELYGIKYKSMRNLKEPEKTYISLNELEELKKGNLKISNDNSEIYFKEEKIGIALENRKAMEGMLYSYSYFRFIDDAGFAFFIERDELNILNEIEIITLGTKGKMAKIEIKEIETSIFDPIIDTQKGLLLLTPAYFEDGVKPIFDSNIIAIANYKPETIGYWDLKNNHPGEQFKVVPSGSVYVIKGDFEKENYKINFTDKYDEYNFGKYIEIKI
>NZ_CP009471.1|WP_014295927.1|450082_450910_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MSGKVGFLYAVTQIHAGKGMDVGVVDQPIQREVHTGFPIIAGIKGAIRNELSFNKEEEIFGSKPGNNNKESKPGNITFSEAKILFFPLRSINRGLVWITCPMVLSRLKTAFEISGNTEMASKINKFLKTIKNKKEYSTFKSTVVNVEEYAIETEESNELKELMKELKKVSPDEYLQKVLEENVIVLKDEDFSFFVRNATEVLPRIRINPDTGTVAEGALWYEEYLPQDTVMFFLIKSLKNSEELLNEVEKNLDKEYINIGGKASVGKGFSYIKLM
>NZ_CP009471.1|WP_014295926.1|449719_450073_-|type-III-B-CRISPR-module-associated-protein-Cmr5
MKRENSTKLLAKKFVIQKINKKYKDDYRSLIKGLGSMIIQNGLYGTLVFLKAKNKDHHKAVFNDIEQYLKEKGLFKGEDLLTFLENTEELSTIQEKVLEFTNWYRRYVDIFIQTGGE
>NZ_CP009471.1|WP_148265128.1|448964_449723_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MNLKYYTNYKPENLKNASLYYDKFVYHEANPEDLKKIKDDYKDILINLDKNIIKKNIEIIKNIRIQMINKIKKHYNVKTYIVKNKTPFLIGAGIPSIDEIGFYWSRNYGLPIIPGTSIKGAFRKYIESNNDLKSIIDVVFGNAEKKGYIDFLDAIPINTIKLNIDYQTPHFQEYYMNNQPPNDVYNPIPLNYLNVSNGTFRIDLLISADSNEVINIINIHFKYFLEYFGIGAKTSMGYGRFKIQELSNFDRR
>NZ_CP009471.1|WP_083635626.1|448156_448981_-|CRISPR-associated-endoribonuclease-Cas6
MLIEGDTIFYSIVIELKALESGVIPTFPGKKIHGLFFNILKDVDKEISYKLHEDKNYKPFTVSSFLGKKIDEPVTILKGKRYYIRMTFLEEKIFILFTTKIFKNKIFKEKINIEDISFSIIRIIFDKEHSKWANLLTIDDLLKENYDNKISLTFITPTLFKTGDKHLRYPDPEKIFNSLLIKFNKYSPYKLNEKVKEKFNTIKIIQRKTHLKYIYFPNFYLQGFTGNVVFEIPEDNYELKKTANILSDFAFYAGVGYKTTMGLGQTRREEPVNV
>NZ_CP009471.1|WP_014295923.1|447027_448164_-|CRISPR-associated-protein
MYSNIVLTGGKSILGKFNLLGKFIEDNNIEHVKNLKSEDVEKWIEKVKVAFQNSKSDPKKVSVEYSLVHTLKEMNKLANNPDISIIHTNTKEGIISAKLNEYIFRKDFNANVILKGVDFDINDRIKLNKQYGEFMDILVTELQKGNIYNTFFSPTPGYKVMSYLGYVAGSFYGYKMGYLYEEGSVFQEVPPIPIKFDIEESIDYLYLIKEIQESEIKYNSLSKMEQEFIDNHTYFFDTIDGVVVLNAFGLFLFKNILTTEIFISDELKEMWDKLDNDKRKFVKTQIFELIRKIKLFKSNNNSYKGELMHNKSWEGKRFNKPYLYKSITGNIFRAVWDTDENKLNLYYIWLDHDKYEREYEKIMQKYQDYKCKNLLELI
>NZ_CP009471.1|WP_014295922.1|445325_447017_-|DUF1874-domain-containing-protein
MEKILLLSFLGKGRYNESLYYRLEAENKKAKSYLSPLANAYLEKERGNDVEIKFFITKEVKENFLENPNSEHGQNINNEINNLHQKGISVTFENIPEGRNYNELEEIISIIKKSISEFSEKEIIFDLTHGLRHISTFTTGVIFYLKNLQQDFEEKNIILYYGAYDIRKEFKNKPPEVPILNISSTLELSNLTLALEEFKEYGITKRIEKALRNIQKLVATNKLCNVNKLKFSSLSTELSNFNNIIKIPASPEKIINSILKIKEILDNSIIEFRNCSKSTEKLFFIEPINYFLATLRKIIVEDLFYNIDSIKNDNTLTREKIIFMANFIKLLLKWEMYSEAMIQIRELLIDLHLLAKGQILYYDDKEKRERIFWEDSLKRNEIAERLDKLTKNIIDTRNKIAHAGRGTDDFKKENLKKLLLSYVREIEELSNNIELFEKKEATLKRKVYLLNSIIIPLSKDSETGNFDIEKITKEKFYNFLKNALNEQTLDSAIGHDSIKHFIKEQFDLDIPLERKEIYFAPGEEAIVIKLEKRPEEGKIYTKEEMDYMEENNLIGYYYIKRKF
>NZ_CP009471.1|WP_156865381.1|444909_445065_-|hypothetical-protein
MKSYKDLMQELLEDEKFREIHFKKEALHHFLDEIVKDEKKKGKFIEALNLL
>NZ_CP009471.1|WP_075780268.1|458372_460040_+|AAA-family-ATPase
MKELKSLPLGESNFKTIMENNMYFIDKSMLIKDILSAGRVILITRPRRFGKTLNMSMLEHFFSMKENSENLFKDLKIWNEKKIIEKYLNNYPVIFISFKGLKKKKYEDMKNGIRELISKLYTKYVYLLNTDKITQWDKKRIIGILDKTAEDAVFEDGIKNLTEYLYIYHGKKVILLIDEYDTPIQQSYLNGYYDELIDFIGNILGNALKDNEYLEKAVLTGITRVAKESIFTGVNNLQISTVLSRLFNDKFGMTKEELHEALKYYGMEYEEEKIIEWYNGFNFGGFEIYNPYSIMNLIFEKEIKNYWINTSGNKLIKDLIAKGSAEIKSKIYDLIEGETVTTTINENLVYGDLNVNVEESVWTLFLFTGYLTWIDKIGEGNSAEYRLKITNKEALDFFKKTVVNILEDSGFKYKTLLKDLIEENYEEFKENFKELVENTISYFDVSGKEPERFYHGLILGLSVGLQKEYIIKSNRESGYGRADLILIPKKRSNPGIIFEFKKYYKKDGDLKSSAEKGMKQIEEKNYETEIKSHGIERIIKVAIAFDKKDVEIVIK
>NZ_CP009471.1|WP_075780269.1|460097_460838_-|sulfite-exporter-TauE/SafE-family-protein
MLYILVFLAGLSSGFINIIAGGGSLITLPILNLLGLPMDIANGTNRIGIIFQNITATTKFKKSEVLDLKRAIFLAVPATLGALVGASIVVNIDKTLLKSIVGFILIIMSIFLVKKPDLWTKERVVKRNNILSFIVFFIIGIYGGFIQAGVGFFLMIALVLLEGYDLVKTNAIKVFLVLIYTIFAFIIFAVNDQVNYLAGFVLALGSITGGYFGSAFSVKKGAKWIQKILFIVLIVIGFYYIYNALK
>NZ_CP009471.1|WP_075780270.1|460955_463148_-|DUF4230-domain-containing-protein
MKKMIIRILTLALIIGAAFLVSRYNIISNFFAKSKEASVQIPSLNIEAIRDLSQLRVFSYNMDFLFIAKDENNNYYVAIYPYTVEAGIDLNKIKSEEKVYSKGVIYFPSPEIFYYGESFDKKPIIVTDQIKIDSSYYKDNIKEGFKMYSRDVAINKGIYEKTEKALKEYLKKFVPEEYDLKFSEPDNNFTKINAERFQAYFKLTNELYRKYKFSDENGKYFAEFLNKEDPEIKFTFNFSQEYKKDHKTFFNDVESKFKGELCYKLVNPDNPFDYNYSFKINRNKNTLIGFILNGGDLINFKFNTQNEEDFKKYTSDFIYYMFSYRNSQNKNYTEVGKYKDFINYLYKSQIAIDEEKINTLENLGENILSLQRDVYSEYGNLFINLEKLIEKNIDTSENINDYNLKLLAKAYYYINNKDKRIIELIDDLKTWFEKNENIENAFEPYLMQEYYNWNINEKISLLKDKVMTYLMINYKNYLKNDEIEKYKREIINEGIYYSNVWNNIINSDIERKEYLKRIYLNIVKNQKLEHYLYYDKDKKLVRIKDFNDPDFYLSDIYYDFQVKDKYNNIILDSDSLANAFVEMYEKFSEKEKENFKSLIKDNFDDEYYFFSDVNSKKFFKNNFIIVLTRNAFNLPKNAFKVYTVFVFGKNGLLLFETSKKIFGDGFKLKYQKFIEYSELPEKLEHKNASIKAILDVLNDTESNNLTEEICENLKYLIRFILRNKVNVFVL
>NZ_CP009471.1|WP_075780271.1|463144_464011_-|hypothetical-protein
MDEQDKVKKKNGMLKRFAVILFYIGIFILFVFIFNYFFPVENEVSAPKKSYFDNIEYIVFKEIQFNNYIVYKDNNQSKARVYYIKGRAEIKFNVEDLKKRIESDPVTGKEIVYISIPQKDMLKIDVEIENSKEIDTFPIEIKSNNSNLMDITEKFSPVVGTVLGAWIGSKLTNISILKNFKAINIVGTLGGAVGGYLLTKHFVRKLEKSSSQSSNTVNDLSLGLDEEIKAKAKDLIALEFLYGNDNEFKKDIIEYYKSEFLKAVKPLYSIQDENVEVVWDNSLLEVIQ
>NZ_CP009471.1|WP_075780272.1|464031_466356_-|trypsin-like-serine-protease
MKKSFFLLFIVLLIFSIFSFGDIKILNISMEDRDELFYYAPIVTNNYIILASPGTPDKDYNDAGIYLLDKENLEILDVFKTYSPVSIVSGECFYPGYFSTYYAYYDNTLISFYVSDSEKISVEWKKSFEYKDIEITNDFDNDFIIKENKLNARKNDIIIKINDEYLYNYSDMAKYLENYSEDVATLHLLRNNSNISYVYKTNIVTKPDYIISGVIYRDEFDFSDNLFIQTEKYIYQLDYEGNIINRYYAEKKSHKLPPTFSDLNQDGKIEVVFFEDNYIKILDNGNLIKIDFDYWYQDEEDIFAPISTVYYADVDNDYYPEGVFVDKNFTINYIEYDPTTKSYYISYSELPNKGNYKYPLVSGNVVYDFNFTGDLLTLITYNKEIYMLSSNEKIISKKILKFPIISRPYIYWKNGWFIVLTQYDFDNEKTFLTKLKYKDEKFEIIDTYEYNGFYLLEGYIPYNDNIYALLCSSENTILQYIEKDGTEIFEAYETYMSNNNNFIDYIQTFKKHDLKNKLLIAESGEEIISPEEIAKKMESVVRINNYVYSSDEELEASGSGFIIAEDDFYYYIATNAHVVSTIGEDITKDISYYGLSITFFNGETVSPEEVFINTTFKDIAILSISKFYLDNTYPVLPLGLYSHTIGTKVYALGNPKGLDFSFTQGIISAIRFARINEAYKINNDKFFELIQTDTAINHGNSGGPLVDKYGNVIGINSLGGDKNITEGLNFAISANDLYYEIKKDNFIKLFYDSRLPNDWLFKTLKNKFSKYYNY
>NZ_CP009471.1|WP_075780273.1|466487_467852_+|hypothetical-protein
MDEKIIFSILNHENDIIYKKYLNNEFLFGESIETTITPLHAAIISDNIEVIKLMEKSGYNIVYALLNNNDILNPYILAKRLDREEIVEYFDEILEQNLNTDLKNTENFKYIEIEKVFEDILKDAENKQKIQEFLEKFLKHPKNLLLETNIAKRIFCEIPNEELVFFIKKIIDVLTDEYCSMFLYEFLDPKCKLASVYALIRIKESQNIAVYYNEKYINRLIDIYDIFMLNDDEDKITYLETINRFYIEELSEDIKDLFFETQNDKLKYITYKILLKYELEELFEITKEAMKSDYLPLKELATLIYILKYENNCKKQDNIKFENLREEDYIAISLFDTPYAEDIIYKKFSTFSYDTKLNIIHNLIIISSKRRYNMLLDIYKFEKNPEIKAEIIYQFIIREIYTPEILKVFIEDFIKNLDEYNSYDDNEDFNIFSALGHYFANVLMKKELFEEDNV
>NZ_CP009471.1|WP_075780274.1|467848_468733_+|hypothetical-protein
MKKILLFFLLSFLTVFVYAQTLLSTEGKKILEEELNRFNIEVINEIDNTTEKIYNKIADYEKYSKIFVEDITDLGSTSKSIYYMSKDSLLKLIKRNSNSYENYIKKMFEHHFFNEEKIKKIIVDEINIFNIKINEKLYTFIENLDKKLSMEDKKILENDDDFKSFVNAFDVNGIFKNNNEIFSEQIINLVSTHQNSILKKKLFSATLKSGSIVGSFLISLSTQNPIFAATSIFYTIILTLNSEKNNIKKEELAVEISSQIEKYADNISNIVKKLLSQTIDTEINKIKKSFNLLY
>NZ_CP009471.1|WP_075780275.1|468760_469273_+|DUF1232-domain-containing-protein
MPNNNFKDFENEVNSYENKVEIESGSFYKKLRNKIKKWAGKNKDNKILEYILLAPDLFYFFLTVLKDKDVYVDYKLKITGYLAYFISPIDIMPEMVLGPAGYLDDVLMGLLFLRTLLKELPYEYVEEKWPGDKEVLKNVSVMIDNIQTIIDSKIFRSVMSYFSKNIEKKK
>NZ_CP009471.1|WP_075780277.1|471531_472203_+|Crp/Fnr-family-transcriptional-regulator
MQQIFEQISKTPIFKSLKITEIEELISSEKMIIKSYEKDEIIRFRGEKVNEVMILLSGQVKAEMSDTQGKIIEIEEIKAPNLLAVGATFSKNSIIPVDIIAIEKSTVAFINKDEVLNLCMHNKDFLQELIEYLGTKFVFISQRLWFITLNNIKDKILFHIKGKLKDSSDDYVILEYSVEQLSHLFGVTRPSLSRAFSKLEEEGIIKKEGNKIYILNKNIFKDI
>NZ_CP009471.1|WP_075780278.1|472199_473198_-|LacI-family-transcriptional-regulator
MKRINIKDVAKEAGVSISTVSRVINKSAPVKEELRKKVEEAIKKLEYKPSIVARSLRKGKAKTIGLVIPDITDPYFPHIVKGIEDYLKKEDYTLLLSNSGQDLEQETKIIETFESNHIDGVIFIGSGLTNPYLKHLKERGIKVVYLDRILKGIDVSYVVSDNKQGMHDLLQYLYDTNHRSFHFVNGNENTFSAQVRYEAFAEFMEKNNIKSYKHIYSCFSYDAGYQYGKEIDLKKLPDVIMGGNDLIAYGLMDALDERGVKIPDDVSITGFNDIPFSRHYKPSLTTVRQPIYKMGYTAANLIIQIINSDGPVFKGIVLKTELIIRNSTKKRD

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Crispr_ID: NZ_CP009471_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009471_4

469908-470941

TypeIII

Consensus_repeat	Method
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	PILER-CR
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	CRISPRCasFinder
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	CRT

13 spacers

cmr1gr7,cas10

The CRISPR arrays of NZ_CP009471_4

>merge|NZ_CP009471|4|469908-470941|PILER-CR,CRISPRCasFinder,CRT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACACTGATTTGAAACTTTTTATCAAAACTTCCATCGTAGAGGCTATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACTATCTCCGTTGGATATGATTATATCCCAATCTTCTGTTTCTATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACTATTTTATGAATTTCATATGTGTATCTAATATAGGTTTTATATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACTAGTATTCCAACCATTCCTCCATTGAGTTAAATCCTTCTTTATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACGCTCTTATCATGCGTTCAGAAACATTAGTAAGAGCTTGGTCATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACTACCTTCCCTCTATGTGGTGGGCGTGACGCACAAATTCACCCGTATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACTCAATTAATTCTTTTTTATTATTAGGTTGTATCATATTAATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACCTAACCCCTTCATATACAAAAGGGACGTAGTCTCGTGTCTTATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACTCTCTTTCTACCCACCCGAATATTCTAAGGTGGGCATCAATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACATATATAACACTATTATCAACAACTATTCTTAGTGAATCAATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACTCTGGGATGACAACGTCATCCCATATAAAAATCTTTTTTACATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACATTATCATACCATTGATAACGGATTAATTCTTCATCATCAGATCCGAATATAACTGCTCTCTGAAAGAGATAGAAACCGTTGAATAGAATCCCATTCAACGTTTAAAACTTTCTTAATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC

>NZ_CP009471|4|4|469908-470941|PILER-CR
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	ACTGATTTGAAACTTTTTATCAAAACTTCCATCGTAGAGGCT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TATCTCCGTTGGATATGATTATATCCCAATCTTCTGTTTCT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TATTTTATGAATTTCATATGTGTATCTAATATAGGTTTTAT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TAGTATTCCAACCATTCCTCCATTGAGTTAAATCCTTCTTT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	GCTCTTATCATGCGTTCAGAAACATTAGTAAGAGCTTGGTC
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TACCTTCCCTCTATGTGGTGGGCGTGACGCACAAATTCACCCGT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TCAATTAATTCTTTTTTATTATTAGGTTGTATCATATTA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	CTAACCCCTTCATATACAAAAGGGACGTAGTCTCGTGTCTT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TCTCTTTCTACCCACCCGAATATTCTAAGGTGGGCATCA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	ATATATAACACTATTATCAACAACTATTCTTAGTGAATCA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TCTGGGATGACAACGTCATCCCATATAAAAATCTTTTTTAC
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	ATTATCATACCATTGATAACGGATTAATTCTTCATCATCAG
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	CGTTGAATAGAATCCCATTCAACGTTTAAAACTTTCTTA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC

>NZ_CP009471|4|4|469908-470941|CRISPRCasFinder
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	ACTGATTTGAAACTTTTTATCAAAACTTCCATCGTAGAGGCT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TATCTCCGTTGGATATGATTATATCCCAATCTTCTGTTTCT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TATTTTATGAATTTCATATGTGTATCTAATATAGGTTTTAT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TAGTATTCCAACCATTCCTCCATTGAGTTAAATCCTTCTTT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	GCTCTTATCATGCGTTCAGAAACATTAGTAAGAGCTTGGTC
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TACCTTCCCTCTATGTGGTGGGCGTGACGCACAAATTCACCCGT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TCAATTAATTCTTTTTTATTATTAGGTTGTATCATATTA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	CTAACCCCTTCATATACAAAAGGGACGTAGTCTCGTGTCTT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TCTCTTTCTACCCACCCGAATATTCTAAGGTGGGCATCA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	ATATATAACACTATTATCAACAACTATTCTTAGTGAATCA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TCTGGGATGACAACGTCATCCCATATAAAAATCTTTTTTAC
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	ATTATCATACCATTGATAACGGATTAATTCTTCATCATCAG
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	CGTTGAATAGAATCCCATTCAACGTTTAAAACTTTCTTA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC

>NZ_CP009471|4|4|469908-470941|CRT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	ACTGATTTGAAACTTTTTATCAAAACTTCCATCGTAGAGGCT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TATCTCCGTTGGATATGATTATATCCCAATCTTCTGTTTCT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TATTTTATGAATTTCATATGTGTATCTAATATAGGTTTTAT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TAGTATTCCAACCATTCCTCCATTGAGTTAAATCCTTCTTT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	GCTCTTATCATGCGTTCAGAAACATTAGTAAGAGCTTGGTC
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TACCTTCCCTCTATGTGGTGGGCGTGACGCACAAATTCACCCGT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TCAATTAATTCTTTTTTATTATTAGGTTGTATCATATTA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	CTAACCCCTTCATATACAAAAGGGACGTAGTCTCGTGTCTT
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TCTCTTTCTACCCACCCGAATATTCTAAGGTGGGCATCA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	ATATATAACACTATTATCAACAACTATTCTTAGTGAATCA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	TCTGGGATGACAACGTCATCCCATATAAAAATCTTTTTTAC
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	ATTATCATACCATTGATAACGGATTAATTCTTCATCATCAG
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC	CGTTGAATAGAATCCCATTCAACGTTTAAAACTTTCTTA
ATCCGAATATAACTGCTCTCTGAAAGAGATAGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009471.1\|WP_075780280.1\|476160_477231_+\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NZ_CP009471.1\|WP_014295929.1\|451887_454248_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_CP009471.1\|WP_041638749.1\|478081_480004_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP009471.1\|WP_075780277.1\|471531_472203_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP009471.1\|WP_075780267.1\|454244_455498_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|224286
NZ_CP009471.1\|WP_014295942.1\|474556_476098_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_CP009471.1\|WP_083635627.1\|480115_481420_+\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|237999
NZ_CP009471.1\|WP_075780272.1\|464031_466356_-\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|223343
NZ_CP009471.1\|WP_075780278.1\|472199_473198_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP009471.1\|WP_075780270.1\|460955_463148_-\|DUF4230-domain-containing-protein	unknown	unknown	gnl\|CDD\|379417
NZ_CP009471.1\|WP_014295948.1\|482737_483745_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340831
NZ_CP009471.1\|WP_075780279.1\|473369_474500_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277318
NZ_CP009471.1\|WP_075780275.1\|468760_469273_+\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876
NZ_CP009471.1\|WP_075780273.1\|466487_467852_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_075780274.1\|467848_468733_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009471.1\|WP_075780269.1\|460097_460838_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP009471.1\|WP_075780271.1\|463144_464011_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225628
NZ_CP009471.1\|WP_075780791.1\|477652_478045_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129116
NZ_CP009471.1\|WP_075780268.1\|458372_460040_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|313108
NZ_CP009471.1\|WP_014295947.1\|481440_482727_+\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|237999

Protein	Function_ID	Function_description	E-value
NZ_CP009471.1\|WP_075780280.1\|476160_477231_+\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP009471.1\|WP_014295929.1\|451887_454248_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	6.32108e-85
NZ_CP009471.1\|WP_075780277.1\|471531_472203_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	9.81743e-24
NZ_CP009471.1\|WP_075780267.1\|454244_455498_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|224286	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.19603e-24
NZ_CP009471.1\|WP_083635627.1\|480115_481420_+\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	1.00967e-11
NZ_CP009471.1\|WP_014295942.1\|474556_476098_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	1.09392e-45
NZ_CP009471.1\|WP_075780278.1\|472199_473198_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	3.7743e-121
NZ_CP009471.1\|WP_075780270.1\|460955_463148_-\|DUF4230-domain-containing-protein	gnl\|CDD\|379417	pfam14014, DUF4230, Protein of unknown function (DUF4230). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 203 and 228 amino acids in length.	6.53283e-05
NZ_CP009471.1\|WP_014295948.1\|482737_483745_+\|glycosyltransferase	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.65422e-32
NZ_CP009471.1\|WP_041638749.1\|478081_480004_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP009471.1\|WP_075780269.1\|460097_460838_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.25398e-28
NZ_CP009471.1\|WP_075780275.1\|468760_469273_+\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	6.49366e-08
NZ_CP009471.1\|WP_075780272.1\|464031_466356_-\|trypsin-like-serine-protease	gnl\|CDD\|223343	COG0265, DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones].	3.45166e-29
NZ_CP009471.1\|WP_075780279.1\|473369_474500_-\|hypothetical-protein	gnl\|CDD\|277318	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.1454e-26
NZ_CP009471.1\|WP_075780271.1\|463144_464011_-\|hypothetical-protein	gnl\|CDD\|225628	COG3086, RseC, Positive regulator of sigma E activity [Signal transduction mechanisms].	0.00213655
NZ_CP009471.1\|WP_075780791.1\|477652_478045_+\|hypothetical-protein	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	1.93657e-45
NZ_CP009471.1\|WP_075780268.1\|458372_460040_+\|AAA-family-ATPase	gnl\|CDD\|313108	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase. This family contains many hypothetical bacterial proteins. This family was previously the N-terminal part of the Pfam DUF1703 (pfam08011) family before it was split into two. This region is predicted to be an AAA-ATPase domain.	5.74106e-63
NZ_CP009471.1\|WP_014295947.1\|481440_482727_+\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	2.14142e-15

>NZ_CP009471.1|WP_075780275.1|468760_469273_+|DUF1232-domain-containing-protein
MPNNNFKDFENEVNSYENKVEIESGSFYKKLRNKIKKWAGKNKDNKILEYILLAPDLFYFFLTVLKDKDVYVDYKLKITGYLAYFISPIDIMPEMVLGPAGYLDDVLMGLLFLRTLLKELPYEYVEEKWPGDKEVLKNVSVMIDNIQTIIDSKIFRSVMSYFSKNIEKKK
>NZ_CP009471.1|WP_075780274.1|467848_468733_+|hypothetical-protein
MKKILLFFLLSFLTVFVYAQTLLSTEGKKILEEELNRFNIEVINEIDNTTEKIYNKIADYEKYSKIFVEDITDLGSTSKSIYYMSKDSLLKLIKRNSNSYENYIKKMFEHHFFNEEKIKKIIVDEINIFNIKINEKLYTFIENLDKKLSMEDKKILENDDDFKSFVNAFDVNGIFKNNNEIFSEQIINLVSTHQNSILKKKLFSATLKSGSIVGSFLISLSTQNPIFAATSIFYTIILTLNSEKNNIKKEELAVEISSQIEKYADNISNIVKKLLSQTIDTEINKIKKSFNLLY
>NZ_CP009471.1|WP_075780273.1|466487_467852_+|hypothetical-protein
MDEKIIFSILNHENDIIYKKYLNNEFLFGESIETTITPLHAAIISDNIEVIKLMEKSGYNIVYALLNNNDILNPYILAKRLDREEIVEYFDEILEQNLNTDLKNTENFKYIEIEKVFEDILKDAENKQKIQEFLEKFLKHPKNLLLETNIAKRIFCEIPNEELVFFIKKIIDVLTDEYCSMFLYEFLDPKCKLASVYALIRIKESQNIAVYYNEKYINRLIDIYDIFMLNDDEDKITYLETINRFYIEELSEDIKDLFFETQNDKLKYITYKILLKYELEELFEITKEAMKSDYLPLKELATLIYILKYENNCKKQDNIKFENLREEDYIAISLFDTPYAEDIIYKKFSTFSYDTKLNIIHNLIIISSKRRYNMLLDIYKFEKNPEIKAEIIYQFIIREIYTPEILKVFIEDFIKNLDEYNSYDDNEDFNIFSALGHYFANVLMKKELFEEDNV
>NZ_CP009471.1|WP_075780272.1|464031_466356_-|trypsin-like-serine-protease
MKKSFFLLFIVLLIFSIFSFGDIKILNISMEDRDELFYYAPIVTNNYIILASPGTPDKDYNDAGIYLLDKENLEILDVFKTYSPVSIVSGECFYPGYFSTYYAYYDNTLISFYVSDSEKISVEWKKSFEYKDIEITNDFDNDFIIKENKLNARKNDIIIKINDEYLYNYSDMAKYLENYSEDVATLHLLRNNSNISYVYKTNIVTKPDYIISGVIYRDEFDFSDNLFIQTEKYIYQLDYEGNIINRYYAEKKSHKLPPTFSDLNQDGKIEVVFFEDNYIKILDNGNLIKIDFDYWYQDEEDIFAPISTVYYADVDNDYYPEGVFVDKNFTINYIEYDPTTKSYYISYSELPNKGNYKYPLVSGNVVYDFNFTGDLLTLITYNKEIYMLSSNEKIISKKILKFPIISRPYIYWKNGWFIVLTQYDFDNEKTFLTKLKYKDEKFEIIDTYEYNGFYLLEGYIPYNDNIYALLCSSENTILQYIEKDGTEIFEAYETYMSNNNNFIDYIQTFKKHDLKNKLLIAESGEEIISPEEIAKKMESVVRINNYVYSSDEELEASGSGFIIAEDDFYYYIATNAHVVSTIGEDITKDISYYGLSITFFNGETVSPEEVFINTTFKDIAILSISKFYLDNTYPVLPLGLYSHTIGTKVYALGNPKGLDFSFTQGIISAIRFARINEAYKINNDKFFELIQTDTAINHGNSGGPLVDKYGNVIGINSLGGDKNITEGLNFAISANDLYYEIKKDNFIKLFYDSRLPNDWLFKTLKNKFSKYYNY
>NZ_CP009471.1|WP_075780271.1|463144_464011_-|hypothetical-protein
MDEQDKVKKKNGMLKRFAVILFYIGIFILFVFIFNYFFPVENEVSAPKKSYFDNIEYIVFKEIQFNNYIVYKDNNQSKARVYYIKGRAEIKFNVEDLKKRIESDPVTGKEIVYISIPQKDMLKIDVEIENSKEIDTFPIEIKSNNSNLMDITEKFSPVVGTVLGAWIGSKLTNISILKNFKAINIVGTLGGAVGGYLLTKHFVRKLEKSSSQSSNTVNDLSLGLDEEIKAKAKDLIALEFLYGNDNEFKKDIIEYYKSEFLKAVKPLYSIQDENVEVVWDNSLLEVIQ
>NZ_CP009471.1|WP_075780270.1|460955_463148_-|DUF4230-domain-containing-protein
MKKMIIRILTLALIIGAAFLVSRYNIISNFFAKSKEASVQIPSLNIEAIRDLSQLRVFSYNMDFLFIAKDENNNYYVAIYPYTVEAGIDLNKIKSEEKVYSKGVIYFPSPEIFYYGESFDKKPIIVTDQIKIDSSYYKDNIKEGFKMYSRDVAINKGIYEKTEKALKEYLKKFVPEEYDLKFSEPDNNFTKINAERFQAYFKLTNELYRKYKFSDENGKYFAEFLNKEDPEIKFTFNFSQEYKKDHKTFFNDVESKFKGELCYKLVNPDNPFDYNYSFKINRNKNTLIGFILNGGDLINFKFNTQNEEDFKKYTSDFIYYMFSYRNSQNKNYTEVGKYKDFINYLYKSQIAIDEEKINTLENLGENILSLQRDVYSEYGNLFINLEKLIEKNIDTSENINDYNLKLLAKAYYYINNKDKRIIELIDDLKTWFEKNENIENAFEPYLMQEYYNWNINEKISLLKDKVMTYLMINYKNYLKNDEIEKYKREIINEGIYYSNVWNNIINSDIERKEYLKRIYLNIVKNQKLEHYLYYDKDKKLVRIKDFNDPDFYLSDIYYDFQVKDKYNNIILDSDSLANAFVEMYEKFSEKEKENFKSLIKDNFDDEYYFFSDVNSKKFFKNNFIIVLTRNAFNLPKNAFKVYTVFVFGKNGLLLFETSKKIFGDGFKLKYQKFIEYSELPEKLEHKNASIKAILDVLNDTESNNLTEEICENLKYLIRFILRNKVNVFVL
>NZ_CP009471.1|WP_075780269.1|460097_460838_-|sulfite-exporter-TauE/SafE-family-protein
MLYILVFLAGLSSGFINIIAGGGSLITLPILNLLGLPMDIANGTNRIGIIFQNITATTKFKKSEVLDLKRAIFLAVPATLGALVGASIVVNIDKTLLKSIVGFILIIMSIFLVKKPDLWTKERVVKRNNILSFIVFFIIGIYGGFIQAGVGFFLMIALVLLEGYDLVKTNAIKVFLVLIYTIFAFIIFAVNDQVNYLAGFVLALGSITGGYFGSAFSVKKGAKWIQKILFIVLIVIGFYYIYNALK
>NZ_CP009471.1|WP_075780268.1|458372_460040_+|AAA-family-ATPase
MKELKSLPLGESNFKTIMENNMYFIDKSMLIKDILSAGRVILITRPRRFGKTLNMSMLEHFFSMKENSENLFKDLKIWNEKKIIEKYLNNYPVIFISFKGLKKKKYEDMKNGIRELISKLYTKYVYLLNTDKITQWDKKRIIGILDKTAEDAVFEDGIKNLTEYLYIYHGKKVILLIDEYDTPIQQSYLNGYYDELIDFIGNILGNALKDNEYLEKAVLTGITRVAKESIFTGVNNLQISTVLSRLFNDKFGMTKEELHEALKYYGMEYEEEKIIEWYNGFNFGGFEIYNPYSIMNLIFEKEIKNYWINTSGNKLIKDLIAKGSAEIKSKIYDLIEGETVTTTINENLVYGDLNVNVEESVWTLFLFTGYLTWIDKIGEGNSAEYRLKITNKEALDFFKKTVVNILEDSGFKYKTLLKDLIEENYEEFKENFKELVENTISYFDVSGKEPERFYHGLILGLSVGLQKEYIIKSNRESGYGRADLILIPKKRSNPGIIFEFKKYYKKDGDLKSSAEKGMKQIEEKNYETEIKSHGIERIIKVAIAFDKKDVEIVIK
>NZ_CP009471.1|WP_075780267.1|454244_455498_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MNILEFELLTTSPMFASRDGKTFSLTPQSVRGVMRFWFRAVVPRVIDIHYYNGERKPYIGLKKAEELIFGSTERKSSFDVIVDLISPTNITNNHDYFTFARINKRNRKINYIYGIYGVEEREFLKEKSKLNITFIIKKQPDKLLNIIINLMNLISLVSGFGAKTRKGFGSFKIELIKTNKENSSEIKNSVKNILNELDENLKRYFSSISDTHFKYSQTEFLDIPEFPVLLSDPKTYRVVSTKKSPIKNFSDIYKKLYATEMQESKKGVYIKVKKKLRTLNNTESFTNALREVEASSKNTIESNIIFYQALMGLPINYKYNITSKKLRNYKGNEYTLTNGERKASPFFFSFHLNEKNEYYVRILMITSKISLNNKIYFEGRRNKLITESPESFEIYNQAMDIFKKEVEKKLTNKGEKK
>NZ_CP009471.1|WP_014295929.1|451887_454248_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MNWEKKIIALLHDPIEKALNLEKHENIANRRLNKLGTYLKDDYKNPDYLSSAADRILFPKEKEHFSKRISINIYHYPEYLHPLNGEKLEDYFKNDFKQKIDKLNSEKITDKLEKLEDFKKTYYKTWWELPEQTELSFMLPGDTRIPSHSIIDHLDSASAMSVSNKMSLLLVSIGPVQEFIAAARKTIDLKVGSYMLSYLTFQGIKVIGEEYGYDNVIFPYMRGNYFVKKEFEKIGIFVETSADPGVASLPNIFTAIVPTKDLEKIKSKIKKAIKDEMSNISQFIKIYIEDLIQSEKKYKETIFQKLEAFKNWDKQISQFPIIITVDQEINNIEKYIEKHYIYTEDENIKKLYQKMKQLESTYQMKDIAFYGMYSELLGIKSSLRKTTRDFIQLFEDDVVNGDDLSGANKAVIEIIDKDEKKERLSALSAIKRLFVEYLNEIGYKEAYEKLKYVKSTEEIAGKYKLAVLLMDGDNMGKWISGTLAPSFKKRLHSKVIKELEREDKEYTKLLENINLVTPSYQRMISRTLNNFSNFVPKVVEEFDGLLIYAGGDDVLALFPSNKVFDAANKLRKVYSGIGEEKVGEYVFKNGWCYKKEKNLEYPVFNMMGKQATMSAGIVISKHNFNLKLALNKAREMEKLAKSNEEKSGRKKDSFAIATIRRSGQINISKSFWELNRFDILLKGLEFIKDFEKEKSIKNIILRLKSEYINYCFDEFGNEILTIEDFKNNIIPFLEKRMEIKKDKLKNSFVKLITLNERFLTGNKLMEYFNTLENIEYARRENIYEKN
>NZ_CP009471.1|WP_075780277.1|471531_472203_+|Crp/Fnr-family-transcriptional-regulator
MQQIFEQISKTPIFKSLKITEIEELISSEKMIIKSYEKDEIIRFRGEKVNEVMILLSGQVKAEMSDTQGKIIEIEEIKAPNLLAVGATFSKNSIIPVDIIAIEKSTVAFINKDEVLNLCMHNKDFLQELIEYLGTKFVFISQRLWFITLNNIKDKILFHIKGKLKDSSDDYVILEYSVEQLSHLFGVTRPSLSRAFSKLEEEGIIKKEGNKIYILNKNIFKDI
>NZ_CP009471.1|WP_075780278.1|472199_473198_-|LacI-family-transcriptional-regulator
MKRINIKDVAKEAGVSISTVSRVINKSAPVKEELRKKVEEAIKKLEYKPSIVARSLRKGKAKTIGLVIPDITDPYFPHIVKGIEDYLKKEDYTLLLSNSGQDLEQETKIIETFESNHIDGVIFIGSGLTNPYLKHLKERGIKVVYLDRILKGIDVSYVVSDNKQGMHDLLQYLYDTNHRSFHFVNGNENTFSAQVRYEAFAEFMEKNNIKSYKHIYSCFSYDAGYQYGKEIDLKKLPDVIMGGNDLIAYGLMDALDERGVKIPDDVSITGFNDIPFSRHYKPSLTTVRQPIYKMGYTAANLIIQIINSDGPVFKGIVLKTELIIRNSTKKRD
>NZ_CP009471.1|WP_075780279.1|473369_474500_-|hypothetical-protein
MKKYILLFILLFSALYLFSKSLFLWPPYITYNGKDLFLNFKTNGIIKGLSIHIIDKNLNEVYSIKLQENELYHMPINIDYVNENFEYIIKQNSKVIYKNTFNEFNPLKKDFTFVVYGDTRYYDKLHRMIVDKIIEEKPDFVINVGDMVENGENINYWTNFFNTIKGLNIPYFPIPGNHEKNSKYYYDAFILPEGGGFQNKQWYSFKYGNLNFILLDSIIINNSELFKQETIWLEQTLKNNKNYINIIIFHYPFWNNSIYAWRRDNKILEKKWRPIFEKYNVKLVFNGHVHAYERFKLNDITYITTGGGGAPFDPGHKEKLNPYTQKIHYGYLEYVLLKVKAGKITVITKAVGKSDNYKMNNVKSLDMVLDFFEIDK
>NZ_CP009471.1|WP_014295942.1|474556_476098_+|iron-ABC-transporter-permease
MRRIHLYIIIFAILWVFPVSILMINYFDFHTFLNVFFRARTLRILKNTVYQASLSTVFSFIISILPAIYVANNKNTLSKILENSFFIPFFFPPISTIISFSILYGNNGIINKIFGLNILYTLTAIIIAHSFYNSPIFVKYISDALRNIPKNYIENAIIDGASKKDIIRFIKVPLIIPSVLKGGFLVFMYSFVSFAIVLSLGGIKYSTFEVAIFTTLRSSLNFSKALSYALIQFLILIILNFIISLPKIHEIPSEELYVSKTSMITFFISIFYVLFEYSIVFVGIFSGFYDFINNRFTIKGLYNLFSKSLNKYYPVIKSIYNTTLIALIVGIISIFLSYIILRNIKNHKDMRFANIFIISSLGVSSTFIAMSLLILNIEFSIPYAILLIIGYLVISIPLGYTFLQQRVLSFDNSIIEAAKIDGANKFQTFLFIEMPILKNSLISSFLQIFAIVFGEFTISYTMQVSNYFPIVSNINYTLSNARYYLESQAMSSITVIIIFLIFYISTSLLKEEV
>NZ_CP009471.1|WP_075780280.1|476160_477231_+|peptide-chain-release-factor-1
MEILSFKEKVLEKLKEVEEKLADPEVTSNLDLLQSLGKEHNRLSTLKELFEKYESVNEDIKALEELKHAEEIDEEEYNSMVEEAEKNLKNYYLEILSLLIPGNEINERNIIMEIRAGTGGEEAALFASDLMRMYLRYAENKGWKHEIMELSDTGIGGTKNAVIKIKGKGVFGRLKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEATDVDVKIEDKDLRIDTYRAGGAGGQHVNKTESAVRIVHLPTGIVVTCQNERSQHQNKEAAMSILRAKLYEEALRKQHEELTSQRRSQIGTGERSEKIRTYNFPQNRVTDHRIGYTSYRLGFILDGDLDEIIDKLMEWDLTEKLENLEI
>NZ_CP009471.1|WP_075780791.1|477652_478045_+|hypothetical-protein
MRLKLFNNKKSVTPKNFSAVGPYSHAILKDDELFISGQLPINYETNEMPESFVEQTKQVMENIKTILKSSGFSLKDVVQVQVFLTDMSKFNEFNVVYENYFKKIYPARFVIEVSKLPKDAMVEIACIAKK
>NZ_CP009471.1|WP_041638749.1|478081_480004_+|threonine--tRNA-ligase
MIKIVLPDGSEKEYKKGITAAEIAKGISEGLYRQSVGALVNGELYDLTRPIEVDATVKLITDKDPEAPVIFRHTMAHIMAQAVMRIYGKDVKLAIGPVIENGFYYDFDMEEKISEEDLEKIEAEMKKIIKEDLKIERFEISKEEAKKMFEEMNQPYKVELLEDIEDDTVTYYKQGEFIDLCRGPHLPSTGKIKQFKLLSVSGAYWRGDERNKMLQRIYGTAFAKKAQLDEYLKMLEEAKKRDHRKLGPKLELFMFDSELAPAMPFFLPRGAKVINQLIEFSRELHKKYGYEEILTPLMMNVKLWHQSGHWDHYKENMYFTEKDEMEYAIKPMNCPGHILIYKSKVVSYRDLPIRYSEFGKVHRYERSGVVHGLFRVRAFTQDDAHIFCTKDQIEEEVIKVMDFTNELYNAFGFEYEANLSTMPEDHMGDEKTWEIATNALKAALEKSGINYNINEGDGAFYGPKIDFQIKDSLGRKWQCATIQLDFQMPERFDIHYVDHNNELQRPVMIHRAIYGSIERFFGILIENFAGAFPTWLAPEQVAVIPVSDKYVEFSKEIAAKLDKEGIRVKLDDSNATVGYKIRNAQLLKIPYMIVIGEKEVESNKFNVRTREGNTVEDISLEDIIKTIHEEVKNRSLKLSY
>NZ_CP009471.1|WP_083635627.1|480115_481420_+|cyclic-nucleotide-binding-domain-containing-protein
MESIGGIFMIKKYKNDEILQLENEDPIALVVLKNGHLLSESKFCNYKKVFIKKGIFSEEFLFNIKTIESLRNVRNSEVELITDKKEAEEFLKNNKELLSLAIKKRIKMLVNMNDKIATDFFTKKNQRRLAEDFKTEIEVEEVKKIFKKIYKYNWHYFSDDFIQKYISARELILSEEYEEAYENLKNIDLSNIEDKYFKAEIEIWKIYCLYFMQNNNYEKMFETLHYKYDFLNELISFFILNKSIKDKKIDSNLKTYFKKGYLIPAKTVLFFEGEEGDWSFLNVSGSVYISKFLDNKEILLNILTEGEIVGEIAVIENVQRTATVFTKTPLQFIYITSDNLESLINESYLLGRNILKALIKRVDFQKKLIANTDLIDKTKVLINKYSRQRLNKFKLTPQQFLNLSGLTMDISEFITILSKNKISTIRPDGTLYFK
>NZ_CP009471.1|WP_014295947.1|481440_482727_+|cyclic-nucleotide-binding-domain-containing-protein
MKERLYAPETILVNEGNEVENLIILKEGMLETTSSFCAHHSYETKGIFGAELLIPGIKSFESIRVIENSRVLLLEKELVEKFLLSNSSLVIYLIKKYIEKIISLNKKIFGDIKKENENKKNSEHLIDKNLDVVDISKKYLKRHRRREYTSIKDHNIQLYENGRKLFNAGKIKEALNEFKKIQFNKFDMYFQAEVEIWKDLCMILISPDKKYYLEKTLREKYPFIKELFSFMVFESVITNKPLIKPLVTYLKSGYLLPSHTVLFHEGEEGDWAFMILSGNVRVSKFSPHGEKLLAILSNEEIVGEIACFKDVERTATVFTSTPLQMIKIEKNNLDSLVTNDPGFGLKIVKKLIMRLEFERYWASPMNFDEKLTYMIKKYGKNTLNKSHLKIEEILSLFRITDKKPNEVIDYLFKSNIARLRTDGTLKFI
>NZ_CP009471.1|WP_014295948.1|482737_483745_+|glycosyltransferase
MKILLFSEGKNMFQRSGVGKALQLQQEALKLAGVDYTLNPEDNYDIVHINTIGFTSEKILKEAKKKGKKIIVHTHTTYEDFRNSFIFSNQLAFFIKKRLIKMYSNADFLISPTKYTQNLVRSYGIKTKSAVVSNGVDTNKFKYNAKSAIKFKEKYKLNKPLILSVGLPFERKGILDFYKLAKKLPQFQFIWLGAKMKIVPKKIRKILNEKSIKNLLFPGYIPTEDLINAYSAADIFLFPSYEENEGIVVLEALSSQTPLIIRDIPVYKDWLTNEVNCLKSSSLEDFEKNIFKIINKEIDVEKLKENERIVALERDLKVIGEKLKNIYGDLYAEKV

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

89321 : 101381

Marinitoga_camini_virus(63.64%)

portal,terminase,capsid

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075780060.1\|89321_89780_+	hypothetical protein	A0A139ZPJ8	Marinitoga_camini_virus	1.3e-58	75.8
WP_075780061.1\|89863_90928_+	DUF2800 domain-containing protein	NA	NA	NA	NA
WP_075780062.1\|90928_91771_+	hypothetical protein	NA	NA	NA	NA
WP_075780063.1\|91840_92680_+	hypothetical protein	A0A139ZPL0	Marinitoga_camini_virus	5.5e-50	83.8
WP_075780064.1\|92684_93215_+	hypothetical protein	NA	NA	NA	NA
WP_075780065.1\|93219_93675_+	single-stranded DNA-binding protein	A0A139ZPL3	Marinitoga_camini_virus	7.6e-22	40.3
WP_075780066.1\|93686_93974_+	hypothetical protein	A0A139ZPL7	Marinitoga_camini_virus	7.6e-12	43.4
WP_075780067.1\|93975_94227_+	hypothetical protein	A0A139ZPD3	Marinitoga_camini_virus	4.9e-07	40.5
WP_075780068.1\|94223_94589_+	RusA family crossover junction endodeoxyribonuclease	A0A139ZPL9	Marinitoga_camini_virus	3.8e-32	53.7
WP_156865348.1\|94585_94843_+	hypothetical protein	A0A139ZPD5	Marinitoga_camini_virus	6.6e-15	52.1
WP_075780070.1\|94914_95382_+	hypothetical protein	NA	NA	NA	NA
WP_075780071.1\|95891_96353_+	hypothetical protein	NA	NA	NA	NA
WP_156865350.1\|96432_97674_+\|terminase	phage terminase large subunit	A0A2H4J7G6	uncultured_Caudovirales_phage	2.4e-78	41.1
WP_075780073.1\|97683_99630_+\|portal	phage portal protein	A0A1B1IQE4	uncultured_Mediterranean_phage	1.7e-54	26.7
WP_083635608.1\|99599_100295_+	hypothetical protein	A0A1B1IQC0	uncultured_Mediterranean_phage	3.3e-16	40.1
WP_075780075.1\|100298_101381_+\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	9.2e-34	31.8

DBSCAN-SWA_2

345251 : 360741

Marinitoga_camini_virus(81.25%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156865366.1\|345251_345419_-	hypothetical protein	A0A139ZPH6	Marinitoga_camini_virus	1.3e-19	85.2
WP_075780198.1\|345580_345943_-	hypothetical protein	A0A139ZPH7	Marinitoga_camini_virus	8.1e-51	81.7
WP_075780199.1\|345954_347406_-	hypothetical protein	A0A2H4JH24	uncultured_Caudovirales_phage	9.5e-34	38.0
WP_075780200.1\|347480_348299_-	hypothetical protein	NA	NA	NA	NA
WP_014295820.1\|348378_348999_-	helix-turn-helix domain-containing protein	A0A139ZPI6	Marinitoga_camini_virus	3.0e-45	45.3
WP_075780201.1\|349183_349387_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075780202.1\|349428_349701_+	hypothetical protein	NA	NA	NA	NA
WP_075780203.1\|349697_350714_-	hypothetical protein	NA	NA	NA	NA
WP_075780204.1\|350736_351075_-	helix-turn-helix transcriptional regulator	A0A139ZPJ2	Marinitoga_camini_virus	4.6e-48	92.0
WP_156865368.1\|351190_351442_+	helix-turn-helix domain-containing protein	A0A139ZPJ3	Marinitoga_camini_virus	3.9e-28	89.9
WP_156865370.1\|351465_351630_+	hypothetical protein	NA	NA	NA	NA
WP_075780206.1\|351656_352115_+	hypothetical protein	A0A139ZPJ8	Marinitoga_camini_virus	1.9e-28	48.0
WP_075780207.1\|352193_352685_+	hypothetical protein	NA	NA	NA	NA
WP_156865373.1\|352668_353577_+	phage recombination protein Bet	A0A141E1Q9	Streptococcus_phage	1.2e-13	32.4
WP_075780209.1\|353732_354464_+	hypothetical protein	A0A139ZPL0	Marinitoga_camini_virus	3.7e-18	51.4
WP_075780210.1\|354468_354723_+	hypothetical protein	NA	NA	NA	NA
WP_075780211.1\|354676_355948_+	replicative DNA helicase	A0A139ZPD0	Marinitoga_camini_virus	4.4e-160	67.2
WP_075780212.1\|355959_356427_+	single-stranded DNA-binding protein	A0A139ZPL3	Marinitoga_camini_virus	3.6e-59	74.5
WP_075780066.1\|356438_356726_+	hypothetical protein	A0A139ZPL7	Marinitoga_camini_virus	7.6e-12	43.4
WP_075780067.1\|356727_356979_+	hypothetical protein	A0A139ZPD3	Marinitoga_camini_virus	4.9e-07	40.5
WP_075780068.1\|356975_357341_+	RusA family crossover junction endodeoxyribonuclease	A0A139ZPL9	Marinitoga_camini_virus	3.8e-32	53.7
WP_156865348.1\|357337_357595_+	hypothetical protein	A0A139ZPD5	Marinitoga_camini_virus	6.6e-15	52.1
WP_075780070.1\|357666_358134_+	hypothetical protein	NA	NA	NA	NA
WP_075780213.1\|358946_359408_+	hypothetical protein	NA	NA	NA	NA
WP_156865375.1\|359487_360741_+\|terminase	phage terminase large subunit	A0A2H4J7G6	uncultured_Caudovirales_phage	3.2e-78	41.3

DBSCAN-SWA_3

366230 : 385082

Marinitoga_camini_virus(94.12%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075780223.1\|366230_367196_+	hypothetical protein	A0A139ZPN6	Marinitoga_camini_virus	1.5e-157	87.5
WP_075780224.1\|367213_367564_+	hypothetical protein	A0A139ZPN7	Marinitoga_camini_virus	4.7e-56	94.8
WP_075780225.1\|367580_368078_+	hypothetical protein	A0A139ZPN8	Marinitoga_camini_virus	4.3e-63	69.8
WP_075780226.1\|368090_372170_+\|tail	phage tail tape measure protein	A0A139ZPN9	Marinitoga_camini_virus	0.0e+00	54.3
WP_075780227.1\|372245_372890_-	helix-turn-helix domain-containing protein	A0A139ZPI7	Marinitoga_camini_virus	2.2e-46	49.3
WP_075780228.1\|373060_373264_+	helix-turn-helix transcriptional regulator	A0A0A8WFG2	Clostridium_phage	2.9e-05	49.2
WP_075780229.1\|373279_374155_+	hypothetical protein	A0A139ZPH1	Marinitoga_camini_virus	1.2e-143	87.9
WP_075780230.1\|374188_374527_+	hypothetical protein	A0A139ZPP1	Marinitoga_camini_virus	4.0e-36	68.5
WP_075780231.1\|374532_375270_+	hypothetical protein	NA	NA	NA	NA
WP_075780232.1\|375232_376306_+	hypothetical protein	A0A139ZPP2	Marinitoga_camini_virus	6.6e-32	31.9
WP_075780233.1\|376354_379870_+	hypothetical protein	A0A139ZPP3	Marinitoga_camini_virus	0.0e+00	56.0
WP_075780234.1\|379869_380274_+	hypothetical protein	NA	NA	NA	NA
WP_075780235.1\|380270_380504_+	hypothetical protein	NA	NA	NA	NA
WP_075780236.1\|380496_381060_+	C40 family peptidase	NA	NA	NA	NA
WP_075780237.1\|381182_381824_+	SocA family protein	A0A139ZPG5	Marinitoga_camini_virus	1.5e-52	51.2
WP_075780238.1\|381820_382261_+	hypothetical protein	A0A139ZPG6	Marinitoga_camini_virus	1.6e-13	33.8
WP_075780239.1\|382321_383089_+	DNA repair exonuclease	A0A139ZPP5	Marinitoga_camini_virus	7.8e-120	79.2
WP_014295863.1\|383093_383354_+	hypothetical protein	NA	NA	NA	NA
WP_014295864.1\|383358_383736_+	hypothetical protein	A0A139ZPG9	Marinitoga_camini_virus	8.4e-51	75.4
WP_083635622.1\|383897_384236_+	hypothetical protein	A0A139ZPH2	Marinitoga_camini_virus	1.1e-14	44.3
WP_156865377.1\|384282_384522_+	hypothetical protein	A0A142LP18	Marinitoga_camini_virus	2.3e-17	51.3
WP_075780242.1\|384518_385082_+	hypothetical protein	A0A139ZPH4	Marinitoga_camini_virus	1.9e-83	78.1

DBSCAN-SWA_4

410938 : 422409

Synechococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075780252.1\|410938_411349_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.1e-17	46.9
WP_041638732.1\|411351_412053_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SPE1	Cyanophage	3.1e-38	41.5
WP_014295896.1\|412049_412316_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_148265185.1\|412315_412987_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_075780253.1\|412973_415130_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.3e-135	38.6
WP_014295899.1\|415132_416488_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	3.0e-50	30.9
WP_014295900.1\|416505_417471_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FZ01	Synechococcus_phage	5.9e-56	41.7
WP_014295901.1\|417485_418073_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.7e-29	44.7
WP_075780254.1\|418053_419553_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.2e-61	46.2
WP_075780255.1\|419562_420804_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_075780256.1\|421143_422409_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-53	51.4

DBSCAN-SWA_5

666289 : 674902

Bacillus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075780364.1\|666289_666982_-	response regulator transcription factor	W8CYM9	Bacillus_phage	4.7e-31	34.2
WP_083635635.1\|667046_667943_-	HD domain-containing protein	NA	NA	NA	NA
WP_014296115.1\|668252_669203_+\|tRNA	tRNA lysidine(34) synthetase TilS	A0A2H4UTJ2	Bodo_saltans_virus	4.3e-11	27.9
WP_075780365.1\|669189_671097_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	5.3e-117	42.1
WP_148265135.1\|671029_671494_+	hypothetical protein	NA	NA	NA	NA
WP_014296118.1\|671524_672253_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.0e-36	38.3
WP_014296119.1\|672309_673608_+	PAS domain-containing protein	W8CYF6	Bacillus_phage	5.2e-31	33.3
WP_014296120.1\|673582_674902_+	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	2.2e-122	53.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009471

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection