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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013803 Piscirickettsia salmonis strain PM22180B plasmid p2PS13, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP013804 Piscirickettsia salmonis strain PM22180B plasmid p3PS13, complete sequence 0 crisprs NA 0 0 3 0
NZ_CP013801 Piscirickettsia salmonis strain PM22180B, complete genome 2 crisprs DEDDh,cas3,DinG,csa3 0 0 30 0
NZ_CP013802 Piscirickettsia salmonis strain PM22180B plasmid p1PS13, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP013805 Piscirickettsia salmonis strain PM22180B plasmid p4PS13, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP013804
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 60490 59 Streptococcus_phage(34.48%) portal,transposase,integrase attL 13678:13737|attR 53321:54241
DBSCAN-SWA_2 65952 : 127498 58 Streptococcus_phage(52.17%) portal,transposase,integrase attL 53144:53203|attR 106312:107047
DBSCAN-SWA_3 166316 : 171247 7 Streptococcus_phage(42.86%) terminase,portal,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP013803
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 23580 : 37376 18 Moraxella_phage(18.18%) capsid,tail,transposase,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP013805
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 21605 : 32258 14 unidentified_phage(30.0%) terminase,tail,transposase,head,capsid NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP013801
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013801_1 1098273-1098368 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013801_2 1656181-1656290 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3091 : 61662 57 Escherichia_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_2 191890 : 322698 112 Acinetobacter_phage(11.11%) tRNA,transposase,protease,tail NA
DBSCAN-SWA_3 330664 : 384078 49 Staphylococcus_phage(57.14%) transposase NA
DBSCAN-SWA_4 441075 : 563459 105 Staphylococcus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_5 573574 : 679073 108 Bacillus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_6 686428 : 758658 54 Staphylococcus_phage(44.44%) tRNA,transposase NA
DBSCAN-SWA_7 771131 : 831355 51 Acinetobacter_phage(18.18%) transposase NA
DBSCAN-SWA_8 845018 : 903679 48 Bacillus_phage(26.67%) integrase,transposase,protease attL 871097:871156|attR 887254:887750
DBSCAN-SWA_9 909054 : 1045435 115 Staphylococcus_phage(15.38%) tRNA,transposase,protease NA
DBSCAN-SWA_10 1050647 : 1112273 57 unidentified_phage(18.18%) tRNA,transposase,protease NA
DBSCAN-SWA_11 1119137 : 1153279 28 Burkholderia_virus(33.33%) transposase NA
DBSCAN-SWA_12 1193755 : 1242141 40 uncultured_Mediterranean_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_13 1253038 : 1299668 38 uncultured_Caudovirales_phage(12.5%) transposase NA
DBSCAN-SWA_14 1361901 : 1402307 38 Tupanvirus(22.22%) tRNA,transposase NA
DBSCAN-SWA_15 1568537 : 1584108 15 unidentified_phage(25.0%) transposase NA
DBSCAN-SWA_16 1599095 : 1652361 54 Staphylococcus_phage(33.33%) integrase,transposase,protease attL 1600163:1600222|attR 1658729:1659269
DBSCAN-SWA_17 1674721 : 1793217 100 Tupanvirus(11.11%) tRNA,transposase NA
DBSCAN-SWA_18 1806424 : 2009522 179 Staphylococcus_phage(23.81%) tRNA,transposase NA
DBSCAN-SWA_19 2016423 : 2151748 111 Staphylococcus_phage(23.81%) transposase NA
DBSCAN-SWA_20 2159843 : 2211632 47 Burkholderia_virus(22.22%) tRNA,transposase,protease NA
DBSCAN-SWA_21 2236526 : 2280807 41 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_22 2335725 : 2382433 41 Synechococcus_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_23 2388128 : 2424407 34 Acinetobacter_phage(25.0%) transposase,protease NA
DBSCAN-SWA_24 2469553 : 2535164 57 Staphylococcus_phage(18.18%) plate,tRNA,transposase NA
DBSCAN-SWA_25 2539165 : 2602937 52 Planktothrix_phage(10.0%) transposase NA
DBSCAN-SWA_26 2634728 : 2678088 42 Staphylococcus_phage(22.22%) transposase NA
DBSCAN-SWA_27 2730781 : 2766721 31 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_28 2789929 : 2830145 44 Staphylococcus_phage(42.86%) tRNA,transposase,protease NA
DBSCAN-SWA_29 2917550 : 3028388 101 Staphylococcus_phage(13.33%) tRNA,transposase,protease NA
DBSCAN-SWA_30 3061382 : 3122850 56 Acinetobacter_phage(33.33%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage