CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP013240	Clostridium butyricum strain CDC_51208 plasmid pNPD4_1, complete sequence	0 crisprs	NA	0	0
NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	4 crisprs	cas14j,RT,DEDDh,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,csa3	105	62
NZ_CP013239	Clostridium butyricum strain CDC_51208 chromosome, complete genome	6 crisprs	cas3,csx1,WYL,DinG,DEDDh,csa3	1	8

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013238_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013238_1

493734-493825

Orphan

Consensus_repeat	Method
TTTTACCCTTGCGAACGGTGATTTTTGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013238_1

>merge|NZ_CP013238|1|493734-493825|CRISPRCasFinder
TTTTACCCTTGCGAACGGTGATTTTTGTAACTTGTGAACGAAGTTATCACGTTTATAAGTATTTTACCCTTGCGAACGGTGATTTTAGTAAT

>NZ_CP013238|1|1|493734-493825|CRISPRCasFinder
TTTTACCCTTGCGAACGGTGATTTTTGTAA	CTTGTGAACGAAGTTATCACGTTTATAAGTA
TTTTACCCTTGCGAACGGTGATTTTAGTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013238.1\|WP_003411410.1\|485520_486213_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411324.1\|502005_502848_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP013238.1\|WP_071981821.1\|490442_491396_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|334163
NZ_CP013238.1\|WP_003411340.1\|492341_493454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411453.1\|505627_506173_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_CP013238.1\|WP_003411375.1\|489286_490294_+\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|319265
NZ_CP013238.1\|WP_003411305.1\|488203_489178_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379293
NZ_CP013238.1\|WP_003411390.1\|484940_485450_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP013238.1\|WP_002581761.1\|503417_504164_+\|energy-coupling-factor-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181384
NZ_CP013238.1\|WP_002581746.1\|478941_479268_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411322.1\|483375_484590_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_CP013238.1\|WP_003411464.1\|506233_507097_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223566
NZ_CP013238.1\|WP_003411363.1\|494477_495941_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411329.1\|501225_501996_+\|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl\|CDD\|274139
NZ_CP013238.1\|WP_003413593.1\|496025_496514_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411316.1\|486216_487368_-\|ParM/StbA-family-protein	unknown	unknown	gnl\|CDD\|212669
NZ_CP013238.1\|WP_071981820.1\|480492_482403_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP013238.1\|WP_003430651.1\|496965_497889_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP013238.1\|WP_002581762.1\|504165_504480_+\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|179494
NZ_CP013238.1\|WP_003411462.1\|505096_505573_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207

Protein	Function_ID	Function_description	E-value
NZ_CP013238.1\|WP_003411324.1\|502005_502848_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.88523e-97
NZ_CP013238.1\|WP_003411462.1\|505096_505573_+\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	1.08937e-96
NZ_CP013238.1\|WP_071981821.1\|490442_491396_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|334163	pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324.	1.80237e-14
NZ_CP013238.1\|WP_003411453.1\|505627_506173_+\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	1.00497e-78
NZ_CP013238.1\|WP_003430651.1\|496965_497889_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.31237e-43
NZ_CP013238.1\|WP_003411305.1\|488203_489178_+\|AAA-family-ATPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.31915e-48
NZ_CP013238.1\|WP_003411390.1\|484940_485450_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	8.64972e-07
NZ_CP013238.1\|WP_002581761.1\|503417_504164_+\|energy-coupling-factor-ABC-transporter-permease	gnl\|CDD\|181384	PRK08319, PRK08319, energy-coupling factor ABC transporter permease.	6.40713e-110
NZ_CP013238.1\|WP_003411322.1\|483375_484590_+\|sodium/glutamate-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	1.25391e-123
NZ_CP013238.1\|WP_003411464.1\|506233_507097_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	1.91877e-64
NZ_CP013238.1\|WP_003411316.1\|486216_487368_-\|ParM/StbA-family-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	2.0864e-26
NZ_CP013238.1\|WP_003411329.1\|501225_501996_+\|cobalt-ECF-transporter-T-component-CbiQ	gnl\|CDD\|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	9.86638e-35
NZ_CP013238.1\|WP_071981820.1\|480492_482403_-\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP013238.1\|WP_003411375.1\|489286_490294_+\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|319265	cd16408, ParB_N_like, ParB N-terminal, parA -binding, -like domain of bacterial and plasmid parABS partitioning systems. This family represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	8.7118e-18
NZ_CP013238.1\|WP_002581762.1\|504165_504480_+\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	gnl\|CDD\|179494	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein.	3.26606e-24

>NZ_CP013238.1|WP_003411340.1|492341_493454_-|hypothetical-protein
MSTKLSNEHITRISKDCNEYKILDVYIILAHISSEVKSGKYLIQSYSSKKSDLINIVHKYCPKAAYKTIHNCIEKLEFMNILIYDESLCAWCLKNMENMTKSKDEAETLEERETLTGYTNIRKFFLTDEFFNMKAREKRVIIYICQLLDSKASRNYKNISINLLKFNSSWLKILKTKCKYYAKNTIENMLEKYKDIFNDFSSLVREKDIAPKTVTSFKFTFTCESLNNRNSEEDMLELIKLKNPKEYALVKDKVEFAQITLSKQKIMHIVRAISTIKEWFLKERVTQLIINKYIAIQIHHSRENIKSLPAYSAAVVKAVVNEYNDFKEKFNKHSSDSHINNYYDTYIENDSFSSTVTEDIQYALSMLKAV
>NZ_CP013238.1|WP_071981821.1|490442_491396_-|tyrosine-type-recombinase/integrase
MNITKKQFEEFPKVDYIFGEYMYKYKMHMDKEYRCFSKDDTFIDVKKIKAWQHSYKINYYNIMLFDKYLYMQYKDTDFSIRDIREIHIQEFLDFSYNVMKNKPITINQKLVSLRMIMKYICKYYNVLPYNIALMVPKLKIDSVKPTSISYSDIKKILSILREKNYGIRDVCICKIIMTTGMKITSVFNMKVNDVDLNNRLLRYDNLGKEFFYPIQDTLYNDLCSYMDFRSSINPKCNNLFVNSSGKPKNIRSFQIAFRNAVIKADLDEAYTAQNLRASFLYEMGRILNDENELSELTDQKIVKQYIALKENHFNDII
>NZ_CP013238.1|WP_003411375.1|489286_490294_+|ParB-N-terminal-domain-containing-protein
MVKKNNNSTFNLRTNRNTEKKSSGIASSFFSSNTNETHVDNNISHTSDAPNYTDSIVNHLVNASSGLDSVLVNIDDLYSAPDDWNFYDRLPAGKMQELIESIISIGLQEPVIVWKKDDSGKYMILSGHNRVHAYKILSENQDSEKYSKIHAVIKDKNLSEEEAKEIIVDTNWVQRQLTTIQKARSINFKYRKLKKDSLEKKLKFDINSVIADEYQITSRQLISYKSLGNLTETAQNAVDNAKLSIKAGVAISKLMPEDQDYIINNFDISILNKNYSKIKSACDSESGVVDKSKLSSLLTEEELGSITIKVPIEYKDSLIAEIEALKKKYNIKKIN
>NZ_CP013238.1|WP_003411305.1|488203_489178_+|AAA-family-ATPase
MKGKLYYKLIKDKRNELDITQKQICDELNIQLEEYKKMESGDFIPKKSSLNKICTYLKLDINEIYMENFRDTKVISVMSNKGGVGKTSVTSSVSFCLAELGYKVLCIDADMQGNLTHSFNLETDEEKNLAIALKNELDLKDCIINSQYENLDFVVYNTALSAIDMLMFTKNAREYILKRILTNTINEGLYDFVVIDTNPSLSILNFNVINVTNYCIVPVQLGAFGLEGVGILLNFIDDAKQFNPNFIDYKLVINNYDSRKSITKKSQEWLEENYGDILLESIIRVDTNIENAQVGSMPVLAYNSNCRISNEFRLLAKEILKIIK
>NZ_CP013238.1|WP_003411316.1|486216_487368_-|ParM/StbA-family-protein
MKKELYIAVDPGFDTVKVIANGQFFKFPFNTEKTDEKRISNMTVADDFILYRNKDNETWRIGQYARELIFEKKDSSDIEDKMKSFYSEKRFVSDEFTIGLRTAIAMAVLRLNLYKHLKDIKIYIMVALPHSVRDNYSTQVKSILCGSHDYFVKIGKEEEEEYTFVIEEDNIFTVSQTVASILGETSDDEGNIDEDKFYYLSDGPTLVIDGGFYTIGEVAVDRGGSINEEKTFSDINHAMKNINMEIAKELENQRPDIKYYVIEYLMTKNEGKLKYLKNGKAQIIDLNVLKKEKIKEMSSRFIESLNKKYNNLLDFNYVLVTGGTGARYYEHLKEYYVGKGIVEEDRLILTNNILNGKRFDIEYAIAAGAYKGLKGKVAVLVEQ
>NZ_CP013238.1|WP_003411410.1|485520_486213_-|hypothetical-protein
MKSERIGLRFSKKDEDIISWFLMLRENKIEQSFAVKALLKAFFLQETINGGSIKIRHNVKMEPTSIAINEIDLNDDIIKMKTKGIKLASFTKDIIRLYINISDIDKAPQISELQQIHTKYKLKYLNNIVYEQSQEIKVNIESSPKFKKNIINNIKNENNIIAEESNSNDKDINSNYENLIKEKNNMDMNFQSSSKITFFDEESNNLQEVSKIENDKKVKSKKRNPLLAQI
>NZ_CP013238.1|WP_003411390.1|484940_485450_-|helix-turn-helix-transcriptional-regulator
MNYKYMNELKKFDNIDEFEKMNFVLLSNDIISNTIDNNLQKLLLAKRITISELSRKTGVSKQVISSSIVKNTKIDLDSAIKISRVLKTPIEDIFMLKKNSWVDVYIVNGKTVYLNMKTLTMVSSEEKNMYIKTHKVKYYNPIDDSLSYRKLNENYNELFIKVGKRIEQL
>NZ_CP013238.1|WP_003411322.1|483375_484590_+|sodium/glutamate-symporter
MELNFNIYETMALVSIVLYIGKYIRNKFSILSQYCIPPSVVGGFTFAMLILVLKLTNIGVINLDITLQNLFMTAFFTSIGFTASIKILKKGGIKVITFLCLAILLVILQNIVGVTLASLFKLTPLLGLCTGSIPMIGGHGTAGSFGPILESLGITGATTVSVASATFGLIMGSIVGGLVAKALIHNHKLKTIRDEHSETPPSEVGDYNEENHNILSFKKLTNGACLLFIAMGIGSVVSDFIQQTGLTFPSYIGAMIVAAIIRNIYDFANKEIVEKEIETLGGLSLSFFLTMALMGLKLWQLFDLALPLMIMLFAQVLLVGLFAYFIAYRVMGKNYEAAVFASATCGFGMGATPNAIANMDELTNRYGFVHTPYFVVPIVGCLFIDFVNSGIITIFINFISYYIY
>NZ_CP013238.1|WP_071981820.1|480492_482403_-|threonine--tRNA-ligase
MLINVKLKDGSIKEIEDNSTVFDLAQSISRNLGKSALVGEVNGCLVDLNYKLKNNDEVNILSDDSEKAVEVIRHSSAHIMAQAVKRLYKNAKLAIGPSIANGFYYDFDIDTPIIKEDLEKIEKEMNKIVKENLKFERIDVSKEEALKIMKDNDEIYKVELINDLPEGEKISLYKQGDYIDLCRGPHIPSTKYAKAFKLISVAGAYWRGNEKNKMLQRVYGVAFSNLKELDIHLHNLEEAKKRDHRKLGKELKLFTFAEEGPGFPFFLPKGVILKNSLIDFWRKIHYEAGYVEVETPIMLNKKLWETSGHWYHYKENMYTSMIDDEEFALKPMNCPGGMIVYKSDSHSYRDFPMRVGELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKSEIKGVVELIDKVYSIFGFKYHVELSTRPEDSMGSDEEWKMAEDSLRGALDELNLQYVINEGDGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQLPQRFELEYVGSDNEKHRPIVIHRVIFGSIERFIGILIEHFAGKFPTWLAPVQVKVLPISDKFNNYCDEVVKQFNENGIRVEIDQRNEKIGYKIREARNERVPYIVIIGEKEEGEGNISLRSRKNGDEGSINVKDLIERINNEIKNKYI
>NZ_CP013238.1|WP_002581746.1|478941_479268_-|hypothetical-protein
MKEERFTELDKDDIKRIIPCRQYKWLDDMESEYSEYRFFLEKLKSIKDVKYIGTRDMVYVVSSDYKYKDIKFTMIVDLEYESVDFLVDDCKKVEDIRNLIEGIIKECM
>NZ_CP013238.1|WP_003411363.1|494477_495941_+|hypothetical-protein
MDKDDRLFKEDMIKLFKNVYEVLVKKEKFTDFYETLDNDLANLKDTGKREVIYKNLTNSIKRTKTRWLNKYVNGSNNSLSEDIEYAEHFYKRVLEGVYEPDKFVMIYGVNNIDEYKKKMFNELYTWRDNEDALLSSYKYIGTFQKRSITLAFRSDILKLYYDFLTNNAKSVITIPSVLSNFSIDTTNKKDYLKDDEKEFLDDNLSLEGTIDRLIVNKENQQKLLMKLEKQVYLRIEEGKDSLDIITQIALLKAIKQLNSLDTRIISHYYTHFYNIVADKSVDKYIGDLVSELGLSDSKKNTDAVIKSLLKIGSIRLESENYEGREIKGTLFEVSISERDGRKFAQVFLGGFLRTLIIMDSSFNFNKDVFDLLSNDAQQIAIWLQNRRLKMVLESEDFKDVIAIQRFTDAILMSTKSIYKKRDRIINALDELKQYKLIVKNYEYIKKNYEFVISYIELPESVIKKIKNKEFKTGELIEGQIHADYTVE
>NZ_CP013238.1|WP_003413593.1|496025_496514_-|hypothetical-protein
MFICICFLKHIYENDSIPTDKKHIERYLYKLLIYFNFKLYVATALIIYNTKQKIINTSIILKIFKILNFSLTILEYIIQNKKIIPITFKSFLIFFIVSLLFYIVSHIICYHFFPKYHIIFLKFFIKITFVWLFSQISIVYPKIYSSNNLIVSKIIIEFFLYI
>NZ_CP013238.1|WP_003430651.1|496965_497889_+|HAMP-domain-containing-histidine-kinase
MEILKTPQEYLYKNLVKKSEDLEATILELKKTIDDKNIIYKDYEKRTKHEEVKNEVLANISHEFKTPVNVIYSAVQTQDLIKNTANIEELLKYNKIIKQNCNRLTRLINNFIDTTRFEKENVKTEFTCENIVEITEYLTMCVVPFANSKKLNLIFDTSDEELYSLIDKELYDRMILNLLSNAIKYSRINGNIKVMIKDDNKFIKITIEDDGIGIDKYHLKDIFSIFERVDKSYSRNTEGSGLGLNIAKKIIDIHNGNISIESIKEKGTSVIVSIPKCSEKYVDNISHRLQDNTYVKYEVEVEMSDIY
>NZ_CP013238.1|WP_003411329.1|501225_501996_+|cobalt-ECF-transporter-T-component-CbiQ
MERKIDSYAYKSKLRKINPAFKVIFAFLTLLICIIADNIYVSLAIIVSMGFITIFKGGIKFHEYMSLMSIPVVFMILGSIAIAFGVSMSPIGDYNLHLCGFYLYTSDENIMKTMEIVMKAFGAISAMYMMTLSTNTSEIISVLRKSHIPKIIIELMNMIYRFIFILIDVQCKMKNSAQSRLGYIDFKTSCYSFGSTASNLLIVSLKKANTYYNAMESRCYNGDMLFFEEEKKVKTIHVVLACIYFSILIFIWYIAK
>NZ_CP013238.1|WP_003411324.1|502005_502848_+|ABC-transporter-ATP-binding-protein
MDDKIKEIILQIKELCYSYTGEKNTLNNINLKIHRGEKIAVLGSNGAGKSTFFLNINGVLTPKSGKIIYKGKAITKKNLNELRKNIGIVFQDADNQIIASTVLAEVSFGPMNLKLPKDEVIKRVNEALDYMNISEFKERPPHYLSGGEKKRVSIADIIAMKSEVIIFDEPTAALDPLNAEMLEEVLKKLSLENKTLLISTHDVDFAYRWADRVVVFSKGGIIGDGTPLEIFKNEEILKNSNLKRPIMLDVYETLIEKRILTNDNLYPKNINEFKKIFNKY
>NZ_CP013238.1|WP_002581761.1|503417_504164_+|energy-coupling-factor-ABC-transporter-permease
MKNQNKIIKIAILLVLMFGITPAANAMHIMEGYLPAKYCIGWGIICLPFLIGGFLSIKKSLDKDRKSVTILAMAGAFIFVISSLKIPSVTGSCSHMTGTGLGAILFGPLAVSVLGIIVLIFQAILLAHGGITTLGANTFSMSIAGPLLSFGLYKLCVKLKINRKVSVFIAAALGDLFTYCITSFQLAMAYPSPEGGVFASAVKFLGVFAPTQLPLAIIEGILTVIVIIGLETYAKSELTGLGFLKEEK
>NZ_CP013238.1|WP_002581762.1|504165_504480_+|energy-coupling-factor-ABC-transporter-substrate-binding-protein
MTKNKKTVIILLIIALAIAIIPLFALKGAEFGGSDDAGSVMVEEINGEAYEPWFTPVMETWIDGELPGEVESLLFCVQTGIGVGIFAFFMGRFVERKKWENKKE
>NZ_CP013238.1|WP_003411462.1|505096_505573_+|glutathione-peroxidase
MEFYDLSATKMNGRKVSMEEYRGKVVLVVNTASKCGLTPQFTELEELYNEYKDNGFEILGFPCNQFAKQDPGSNKEIGEFCLRNYGVSFTMFEKIDVNGQNTHPIYKFLKNEAGGLIGSDIKWNFTKFLIDSEGNVIKRYSPITKPSSIKKDIYSLIK
>NZ_CP013238.1|WP_003411453.1|505627_506173_+|glutathione-peroxidase
MNIYDYKYKEISGKEVLLEDYRNKAIVIVNIASKCGFTPQLEDLQKIYEKYKEQGLEIIGFPCNQFSEQSPGSNSDLNTFCKRNYGVTFNLSEKIDVRGSNSHPLFNYLTEKCPFKGFNKENITEKMLYSITEENYPEYLVGDSIKWNFTKFLVDKNGNVVKRYESHIEPLDMIKDIEELL
>NZ_CP013238.1|WP_003411464.1|506233_507097_+|NAD(P)/FAD-dependent-oxidoreductase
MERYDLAIIGSGPAGVSAALNAKIRKKNFIIFGSKELSNKLTKAEKINNYLGFYGKSGAQIRDEFIKHMESMDISITEEKINNIYAMGDYFSLIANDKMYEASAIILATGVNFGRPFKGEEELLGKGVGYCATCDAPLYKDKIFTIIAYNKHEEDEVNFISTIASKVYYIPMYKEKVEVDEKVEIINDIPVEIIGKERVEKLILKNSEIETDGIFILRDSVSPSQLVPGLELDENHVKVDRKMTTNLQGCFAAGDIVGAPYQYIKAAGEGNIAALSAVSYIDNLNKK

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Crispr_ID: NZ_CP013238_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013238_2

493908-494018

Orphan

Consensus_repeat	Method
TTTTACCCTTGCGAACGGTGATTTTTGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013238_2

>merge|NZ_CP013238|2|493908-494018|CRISPRCasFinder
TTTTACCCTTGCGAACGGAAATACAAGTCACGAAACGCAATTTTTAATAAAAATAATAGTAAAAAGGAGTTGAATTTTGTTTTTTACCCTCGCGAACGGTGGGTTTTGGTC

>NZ_CP013238|2|2|493908-494018|CRISPRCasFinder
TTTTACCCTTGCGAACGGAAATACAAGTCA	CGAAACGCAATTTTTAATAAAAATAATAGTAAAAAGGAGTTGAATTTTGTT
TTTTACCCTCGCGAACGGTGGGTTTTGGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013238.1\|WP_003411410.1\|485520_486213_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411324.1\|502005_502848_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP013238.1\|WP_071981821.1\|490442_491396_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|334163
NZ_CP013238.1\|WP_003411340.1\|492341_493454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411453.1\|505627_506173_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_CP013238.1\|WP_003411375.1\|489286_490294_+\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|319265
NZ_CP013238.1\|WP_003411305.1\|488203_489178_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379293
NZ_CP013238.1\|WP_003411390.1\|484940_485450_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP013238.1\|WP_002581761.1\|503417_504164_+\|energy-coupling-factor-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181384
NZ_CP013238.1\|WP_002581746.1\|478941_479268_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411322.1\|483375_484590_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_CP013238.1\|WP_003411464.1\|506233_507097_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223566
NZ_CP013238.1\|WP_003411363.1\|494477_495941_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411329.1\|501225_501996_+\|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl\|CDD\|274139
NZ_CP013238.1\|WP_003413593.1\|496025_496514_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_003411316.1\|486216_487368_-\|ParM/StbA-family-protein	unknown	unknown	gnl\|CDD\|212669
NZ_CP013238.1\|WP_071981820.1\|480492_482403_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP013238.1\|WP_003430651.1\|496965_497889_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP013238.1\|WP_002581762.1\|504165_504480_+\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|179494
NZ_CP013238.1\|WP_003411462.1\|505096_505573_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207

Protein	Function_ID	Function_description	E-value
NZ_CP013238.1\|WP_003411324.1\|502005_502848_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.88523e-97
NZ_CP013238.1\|WP_003411462.1\|505096_505573_+\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	1.08937e-96
NZ_CP013238.1\|WP_071981821.1\|490442_491396_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|334163	pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324.	1.80237e-14
NZ_CP013238.1\|WP_003411453.1\|505627_506173_+\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	1.00497e-78
NZ_CP013238.1\|WP_003430651.1\|496965_497889_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.31237e-43
NZ_CP013238.1\|WP_003411305.1\|488203_489178_+\|AAA-family-ATPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.31915e-48
NZ_CP013238.1\|WP_003411390.1\|484940_485450_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	8.64972e-07
NZ_CP013238.1\|WP_002581761.1\|503417_504164_+\|energy-coupling-factor-ABC-transporter-permease	gnl\|CDD\|181384	PRK08319, PRK08319, energy-coupling factor ABC transporter permease.	6.40713e-110
NZ_CP013238.1\|WP_003411322.1\|483375_484590_+\|sodium/glutamate-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	1.25391e-123
NZ_CP013238.1\|WP_003411464.1\|506233_507097_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	1.91877e-64
NZ_CP013238.1\|WP_003411316.1\|486216_487368_-\|ParM/StbA-family-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	2.0864e-26
NZ_CP013238.1\|WP_003411329.1\|501225_501996_+\|cobalt-ECF-transporter-T-component-CbiQ	gnl\|CDD\|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	9.86638e-35
NZ_CP013238.1\|WP_071981820.1\|480492_482403_-\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP013238.1\|WP_003411375.1\|489286_490294_+\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|319265	cd16408, ParB_N_like, ParB N-terminal, parA -binding, -like domain of bacterial and plasmid parABS partitioning systems. This family represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	8.7118e-18
NZ_CP013238.1\|WP_002581762.1\|504165_504480_+\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	gnl\|CDD\|179494	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein.	3.26606e-24

>NZ_CP013238.1|WP_003411340.1|492341_493454_-|hypothetical-protein
MSTKLSNEHITRISKDCNEYKILDVYIILAHISSEVKSGKYLIQSYSSKKSDLINIVHKYCPKAAYKTIHNCIEKLEFMNILIYDESLCAWCLKNMENMTKSKDEAETLEERETLTGYTNIRKFFLTDEFFNMKAREKRVIIYICQLLDSKASRNYKNISINLLKFNSSWLKILKTKCKYYAKNTIENMLEKYKDIFNDFSSLVREKDIAPKTVTSFKFTFTCESLNNRNSEEDMLELIKLKNPKEYALVKDKVEFAQITLSKQKIMHIVRAISTIKEWFLKERVTQLIINKYIAIQIHHSRENIKSLPAYSAAVVKAVVNEYNDFKEKFNKHSSDSHINNYYDTYIENDSFSSTVTEDIQYALSMLKAV
>NZ_CP013238.1|WP_071981821.1|490442_491396_-|tyrosine-type-recombinase/integrase
MNITKKQFEEFPKVDYIFGEYMYKYKMHMDKEYRCFSKDDTFIDVKKIKAWQHSYKINYYNIMLFDKYLYMQYKDTDFSIRDIREIHIQEFLDFSYNVMKNKPITINQKLVSLRMIMKYICKYYNVLPYNIALMVPKLKIDSVKPTSISYSDIKKILSILREKNYGIRDVCICKIIMTTGMKITSVFNMKVNDVDLNNRLLRYDNLGKEFFYPIQDTLYNDLCSYMDFRSSINPKCNNLFVNSSGKPKNIRSFQIAFRNAVIKADLDEAYTAQNLRASFLYEMGRILNDENELSELTDQKIVKQYIALKENHFNDII
>NZ_CP013238.1|WP_003411375.1|489286_490294_+|ParB-N-terminal-domain-containing-protein
MVKKNNNSTFNLRTNRNTEKKSSGIASSFFSSNTNETHVDNNISHTSDAPNYTDSIVNHLVNASSGLDSVLVNIDDLYSAPDDWNFYDRLPAGKMQELIESIISIGLQEPVIVWKKDDSGKYMILSGHNRVHAYKILSENQDSEKYSKIHAVIKDKNLSEEEAKEIIVDTNWVQRQLTTIQKARSINFKYRKLKKDSLEKKLKFDINSVIADEYQITSRQLISYKSLGNLTETAQNAVDNAKLSIKAGVAISKLMPEDQDYIINNFDISILNKNYSKIKSACDSESGVVDKSKLSSLLTEEELGSITIKVPIEYKDSLIAEIEALKKKYNIKKIN
>NZ_CP013238.1|WP_003411305.1|488203_489178_+|AAA-family-ATPase
MKGKLYYKLIKDKRNELDITQKQICDELNIQLEEYKKMESGDFIPKKSSLNKICTYLKLDINEIYMENFRDTKVISVMSNKGGVGKTSVTSSVSFCLAELGYKVLCIDADMQGNLTHSFNLETDEEKNLAIALKNELDLKDCIINSQYENLDFVVYNTALSAIDMLMFTKNAREYILKRILTNTINEGLYDFVVIDTNPSLSILNFNVINVTNYCIVPVQLGAFGLEGVGILLNFIDDAKQFNPNFIDYKLVINNYDSRKSITKKSQEWLEENYGDILLESIIRVDTNIENAQVGSMPVLAYNSNCRISNEFRLLAKEILKIIK
>NZ_CP013238.1|WP_003411316.1|486216_487368_-|ParM/StbA-family-protein
MKKELYIAVDPGFDTVKVIANGQFFKFPFNTEKTDEKRISNMTVADDFILYRNKDNETWRIGQYARELIFEKKDSSDIEDKMKSFYSEKRFVSDEFTIGLRTAIAMAVLRLNLYKHLKDIKIYIMVALPHSVRDNYSTQVKSILCGSHDYFVKIGKEEEEEYTFVIEEDNIFTVSQTVASILGETSDDEGNIDEDKFYYLSDGPTLVIDGGFYTIGEVAVDRGGSINEEKTFSDINHAMKNINMEIAKELENQRPDIKYYVIEYLMTKNEGKLKYLKNGKAQIIDLNVLKKEKIKEMSSRFIESLNKKYNNLLDFNYVLVTGGTGARYYEHLKEYYVGKGIVEEDRLILTNNILNGKRFDIEYAIAAGAYKGLKGKVAVLVEQ
>NZ_CP013238.1|WP_003411410.1|485520_486213_-|hypothetical-protein
MKSERIGLRFSKKDEDIISWFLMLRENKIEQSFAVKALLKAFFLQETINGGSIKIRHNVKMEPTSIAINEIDLNDDIIKMKTKGIKLASFTKDIIRLYINISDIDKAPQISELQQIHTKYKLKYLNNIVYEQSQEIKVNIESSPKFKKNIINNIKNENNIIAEESNSNDKDINSNYENLIKEKNNMDMNFQSSSKITFFDEESNNLQEVSKIENDKKVKSKKRNPLLAQI
>NZ_CP013238.1|WP_003411390.1|484940_485450_-|helix-turn-helix-transcriptional-regulator
MNYKYMNELKKFDNIDEFEKMNFVLLSNDIISNTIDNNLQKLLLAKRITISELSRKTGVSKQVISSSIVKNTKIDLDSAIKISRVLKTPIEDIFMLKKNSWVDVYIVNGKTVYLNMKTLTMVSSEEKNMYIKTHKVKYYNPIDDSLSYRKLNENYNELFIKVGKRIEQL
>NZ_CP013238.1|WP_003411322.1|483375_484590_+|sodium/glutamate-symporter
MELNFNIYETMALVSIVLYIGKYIRNKFSILSQYCIPPSVVGGFTFAMLILVLKLTNIGVINLDITLQNLFMTAFFTSIGFTASIKILKKGGIKVITFLCLAILLVILQNIVGVTLASLFKLTPLLGLCTGSIPMIGGHGTAGSFGPILESLGITGATTVSVASATFGLIMGSIVGGLVAKALIHNHKLKTIRDEHSETPPSEVGDYNEENHNILSFKKLTNGACLLFIAMGIGSVVSDFIQQTGLTFPSYIGAMIVAAIIRNIYDFANKEIVEKEIETLGGLSLSFFLTMALMGLKLWQLFDLALPLMIMLFAQVLLVGLFAYFIAYRVMGKNYEAAVFASATCGFGMGATPNAIANMDELTNRYGFVHTPYFVVPIVGCLFIDFVNSGIITIFINFISYYIY
>NZ_CP013238.1|WP_071981820.1|480492_482403_-|threonine--tRNA-ligase
MLINVKLKDGSIKEIEDNSTVFDLAQSISRNLGKSALVGEVNGCLVDLNYKLKNNDEVNILSDDSEKAVEVIRHSSAHIMAQAVKRLYKNAKLAIGPSIANGFYYDFDIDTPIIKEDLEKIEKEMNKIVKENLKFERIDVSKEEALKIMKDNDEIYKVELINDLPEGEKISLYKQGDYIDLCRGPHIPSTKYAKAFKLISVAGAYWRGNEKNKMLQRVYGVAFSNLKELDIHLHNLEEAKKRDHRKLGKELKLFTFAEEGPGFPFFLPKGVILKNSLIDFWRKIHYEAGYVEVETPIMLNKKLWETSGHWYHYKENMYTSMIDDEEFALKPMNCPGGMIVYKSDSHSYRDFPMRVGELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKSEIKGVVELIDKVYSIFGFKYHVELSTRPEDSMGSDEEWKMAEDSLRGALDELNLQYVINEGDGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQLPQRFELEYVGSDNEKHRPIVIHRVIFGSIERFIGILIEHFAGKFPTWLAPVQVKVLPISDKFNNYCDEVVKQFNENGIRVEIDQRNEKIGYKIREARNERVPYIVIIGEKEEGEGNISLRSRKNGDEGSINVKDLIERINNEIKNKYI
>NZ_CP013238.1|WP_002581746.1|478941_479268_-|hypothetical-protein
MKEERFTELDKDDIKRIIPCRQYKWLDDMESEYSEYRFFLEKLKSIKDVKYIGTRDMVYVVSSDYKYKDIKFTMIVDLEYESVDFLVDDCKKVEDIRNLIEGIIKECM
>NZ_CP013238.1|WP_003411363.1|494477_495941_+|hypothetical-protein
MDKDDRLFKEDMIKLFKNVYEVLVKKEKFTDFYETLDNDLANLKDTGKREVIYKNLTNSIKRTKTRWLNKYVNGSNNSLSEDIEYAEHFYKRVLEGVYEPDKFVMIYGVNNIDEYKKKMFNELYTWRDNEDALLSSYKYIGTFQKRSITLAFRSDILKLYYDFLTNNAKSVITIPSVLSNFSIDTTNKKDYLKDDEKEFLDDNLSLEGTIDRLIVNKENQQKLLMKLEKQVYLRIEEGKDSLDIITQIALLKAIKQLNSLDTRIISHYYTHFYNIVADKSVDKYIGDLVSELGLSDSKKNTDAVIKSLLKIGSIRLESENYEGREIKGTLFEVSISERDGRKFAQVFLGGFLRTLIIMDSSFNFNKDVFDLLSNDAQQIAIWLQNRRLKMVLESEDFKDVIAIQRFTDAILMSTKSIYKKRDRIINALDELKQYKLIVKNYEYIKKNYEFVISYIELPESVIKKIKNKEFKTGELIEGQIHADYTVE
>NZ_CP013238.1|WP_003413593.1|496025_496514_-|hypothetical-protein
MFICICFLKHIYENDSIPTDKKHIERYLYKLLIYFNFKLYVATALIIYNTKQKIINTSIILKIFKILNFSLTILEYIIQNKKIIPITFKSFLIFFIVSLLFYIVSHIICYHFFPKYHIIFLKFFIKITFVWLFSQISIVYPKIYSSNNLIVSKIIIEFFLYI
>NZ_CP013238.1|WP_003430651.1|496965_497889_+|HAMP-domain-containing-histidine-kinase
MEILKTPQEYLYKNLVKKSEDLEATILELKKTIDDKNIIYKDYEKRTKHEEVKNEVLANISHEFKTPVNVIYSAVQTQDLIKNTANIEELLKYNKIIKQNCNRLTRLINNFIDTTRFEKENVKTEFTCENIVEITEYLTMCVVPFANSKKLNLIFDTSDEELYSLIDKELYDRMILNLLSNAIKYSRINGNIKVMIKDDNKFIKITIEDDGIGIDKYHLKDIFSIFERVDKSYSRNTEGSGLGLNIAKKIIDIHNGNISIESIKEKGTSVIVSIPKCSEKYVDNISHRLQDNTYVKYEVEVEMSDIY
>NZ_CP013238.1|WP_003411329.1|501225_501996_+|cobalt-ECF-transporter-T-component-CbiQ
MERKIDSYAYKSKLRKINPAFKVIFAFLTLLICIIADNIYVSLAIIVSMGFITIFKGGIKFHEYMSLMSIPVVFMILGSIAIAFGVSMSPIGDYNLHLCGFYLYTSDENIMKTMEIVMKAFGAISAMYMMTLSTNTSEIISVLRKSHIPKIIIELMNMIYRFIFILIDVQCKMKNSAQSRLGYIDFKTSCYSFGSTASNLLIVSLKKANTYYNAMESRCYNGDMLFFEEEKKVKTIHVVLACIYFSILIFIWYIAK
>NZ_CP013238.1|WP_003411324.1|502005_502848_+|ABC-transporter-ATP-binding-protein
MDDKIKEIILQIKELCYSYTGEKNTLNNINLKIHRGEKIAVLGSNGAGKSTFFLNINGVLTPKSGKIIYKGKAITKKNLNELRKNIGIVFQDADNQIIASTVLAEVSFGPMNLKLPKDEVIKRVNEALDYMNISEFKERPPHYLSGGEKKRVSIADIIAMKSEVIIFDEPTAALDPLNAEMLEEVLKKLSLENKTLLISTHDVDFAYRWADRVVVFSKGGIIGDGTPLEIFKNEEILKNSNLKRPIMLDVYETLIEKRILTNDNLYPKNINEFKKIFNKY
>NZ_CP013238.1|WP_002581761.1|503417_504164_+|energy-coupling-factor-ABC-transporter-permease
MKNQNKIIKIAILLVLMFGITPAANAMHIMEGYLPAKYCIGWGIICLPFLIGGFLSIKKSLDKDRKSVTILAMAGAFIFVISSLKIPSVTGSCSHMTGTGLGAILFGPLAVSVLGIIVLIFQAILLAHGGITTLGANTFSMSIAGPLLSFGLYKLCVKLKINRKVSVFIAAALGDLFTYCITSFQLAMAYPSPEGGVFASAVKFLGVFAPTQLPLAIIEGILTVIVIIGLETYAKSELTGLGFLKEEK
>NZ_CP013238.1|WP_002581762.1|504165_504480_+|energy-coupling-factor-ABC-transporter-substrate-binding-protein
MTKNKKTVIILLIIALAIAIIPLFALKGAEFGGSDDAGSVMVEEINGEAYEPWFTPVMETWIDGELPGEVESLLFCVQTGIGVGIFAFFMGRFVERKKWENKKE
>NZ_CP013238.1|WP_003411462.1|505096_505573_+|glutathione-peroxidase
MEFYDLSATKMNGRKVSMEEYRGKVVLVVNTASKCGLTPQFTELEELYNEYKDNGFEILGFPCNQFAKQDPGSNKEIGEFCLRNYGVSFTMFEKIDVNGQNTHPIYKFLKNEAGGLIGSDIKWNFTKFLIDSEGNVIKRYSPITKPSSIKKDIYSLIK
>NZ_CP013238.1|WP_003411453.1|505627_506173_+|glutathione-peroxidase
MNIYDYKYKEISGKEVLLEDYRNKAIVIVNIASKCGFTPQLEDLQKIYEKYKEQGLEIIGFPCNQFSEQSPGSNSDLNTFCKRNYGVTFNLSEKIDVRGSNSHPLFNYLTEKCPFKGFNKENITEKMLYSITEENYPEYLVGDSIKWNFTKFLVDKNGNVVKRYESHIEPLDMIKDIEELL
>NZ_CP013238.1|WP_003411464.1|506233_507097_+|NAD(P)/FAD-dependent-oxidoreductase
MERYDLAIIGSGPAGVSAALNAKIRKKNFIIFGSKELSNKLTKAEKINNYLGFYGKSGAQIRDEFIKHMESMDISITEEKINNIYAMGDYFSLIANDKMYEASAIILATGVNFGRPFKGEEELLGKGVGYCATCDAPLYKDKIFTIIAYNKHEEDEVNFISTIASKVYYIPMYKEKVEVDEKVEIINDIPVEIIGKERVEKLILKNSEIETDGIFILRDSVSPSQLVPGLELDENHVKVDRKMTTNLQGCFAAGDIVGAPYQYIKAAGEGNIAALSAVSYIDNLNKK

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Crispr_ID: NZ_CP013238_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013238_3

676959-683324

TypeI-B

III-B

Consensus_repeat	Method
GATTAACAGTAACATTAGATGTATTTAAAT	PILER-CR
GATTAACAGTAACATTAGATGTATTTAAAT	CRISPRCasFinder
GATTAACAGTAACATTAGATGTATTTAAAT	CRT
GATTAACAGTAACATTAGATGTATTTAAAT	PILER-CR

97 spacers

cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NZ_CP013238_3

>merge|NZ_CP013238|3|676959-683324|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GATTAACAGTAACATTAGATGTATTTAAATTGGGTTGAAGGTGGAGACACAGATAAAGATATTGCAGATTAACAGTAACATTAGATGTATTTAAATGCAAATTTATTCTCTAATGCATTAAAAGCACTTGGGATTAACAGTAACATTAGATGTATTTAAATTAAAACAGAAGAAGCTAAAGAAGGATTTAGTTGGGGATTAACAGTAACATTAGATGTATTTAAATGGAAAAGCACCTAATATAGCAATAGGAGGATTAGAGATTAACAGTAACATTAGATGTATTTAAATGCTGTAACAGAAATAGAAACAGTTGTTAATACTGGTGATTAACAGTAACATTAGATGTATTTAAATGAACTGGACCATTTCACCTCTAAAGCTGCCGGTGTGATTAACAGTAACATTAGATGTATTTAAATTTATTATAAACAGACAGGTGATATTGCTACTCTGGATTAACAGTAACATTAGATGTATTTAAATGGTCTACCTCTGTATATAGAACCATCTAACCTTATAGATTAACAGTAACATTAGATGTATTTAAATTAATTAATAGCCATGAAGTACCTAATATCATTTTGATTAACAGTAACATTAGATGTATTTAAATTGTTTTAAGTTATCTAACGATGTTTCTGCATAAATGATTAACAGTAACATTAGATGTATTTAAATTTATATATTATTTCTCCCTTATTTCCATTATTGAGATTAACAGTAACATTAGATGTATTTAAATGATAATAATTTACTTGAATATTTAAATGGAGCTGGATTAACAGTAACATTAGATGTATTTAAATAAAGAATGGCTATTTTCCTTACTTTCTTGAACCTGGGATTAACAGTAACATTAGATGTATTTAAATGTTAGATTATCTCCCTATTAGGGGATTTTATAACGGATTAACAGTAACATTAGATGTATTTAAATTTTTTTGGAAGTACATTAGGGAAAGGTCTTACTGGATTAACAGTAACATTAGATGTATTTAAATTAGCAGAGAAAATATAAAATCATTACCAGCATATGCGATTAACAGTAACATTAGATGTATTTAAATAACTATTAAAGAATTCGAAGATAATGTAGAAATTATGATTAACAGTAACATTAGATGTATTTAAATATTACATTTTCTAAATAAATAAAATAAATAAAAGGATTAACAGTAACATTAGATGTATTTAAATGAAGATAAAGGAACACCATAAGGGATATTATCAAGATTAACAGTAACATTAGATGTATTTAAATATAGATGAAAAACAAAAGCGATTAAAAACACTATTGATTAACAGTAACATTAGATGTATTTAAATTGTGGATCAAACATGCAAATGAGATATGGTCCCAAAGATTAACAGTAACATTAGATGTATTTAAATAGCAGCACTGAAATGCAGATGAATGAAAATAAGATGATTAACAGTAACATTAGATGTATTTAAATAATAGAAATCGATAAAGGAACGTGTATAGCATGTGGGATTAACAGTAACATTAGATGTATTTAAATTGGGCAGTAGGACATTTATTACAACTTAAAGATATAGATTAACAGTAACATTAGATGTATTTAAATAGTAAAGATTTAATAATGTTTTTAACAAGCGTTGCGATTAACAGTAACATTAGATGTATTTAAATAGCATGCCCACCTGAACCTCCTTTGTTAAAAGTTACTGATTAACAGTAACATTAGATGTATTTAAATGGATTAACTGGTAAAATAAAAAATAAATCAGAAAGATTAACAGTAACATTAGATGTATTTAAATACAGTTTAGAATAATAGATAAAGATACATCTAATGAGATTAACAGTAACATTAGATGTATTTAAATGACAGATTTATTAAAAATGGAGCTGGCTGAAAATAGATTAACAGTAACATTAGATGTATTTAAATGTTGCTTGGAAGAAATTACTACCATTACCAGCTGTGATTAACAGTAACATTAGATGTATTTAAATAAAATATTCTCTATGAGTAGACAACCAAAAATAAGAGATTAACAGTAACATTAGATGTATTTAAATTAATGAACATATGAGATATAATTGGGTAGAAATTGATTAACAGTAACATTAGATGTATTTAAATTCTAGTATATTCCAATTTAAGCCATCATTTGATCCGATTAACAGTAACATTAGATGTATTTAAATTACCTTGAGCGATATAATGTATATCAGTAGAATCAAGATTAACAGTAACATTAGATGTATTTAAATAAGAATCCCATATATACTGGTTCTACATATTTACTAGATTAACAGTAACATTAGATGTATTTAAATTTAAGTTGAACTAAAAAACTTGTATTACACTTCTAGGATTAACAGTAACATTAGATGTATTTAAATATATTAAAATAATCCATTAAAGATTGATTGATTAAACGATTAACAGTAACATTAGATGTATTTAAATACTAACTACCCAAGTGATTATTATTATCCAGATGAAGATTAACAGTAACATTAGATGTATTTAAATGGAGATAGTTTTTTATAAGTTTTAGATAATTTAATCAGATTAACAGTAACATTAGATGTATTTAAATTACATTAACATGCAGAGCAGTTGAGGAGGGTGAGGCTGATTAACAGTAACATTAGATGTATTTAAATTTTTTTGGAAGCACATTAGGAAAAGGTCTTACTGCACGATTAACAGTAACATTAGATGTATTTAAATGAAAGCGAAAAAGAAAGATTAGATGAGTTATCATCGATTAACAGTAACATTAGATGTATTTAAATTTTTCATTTTCACATTTTAAGCCATACAGTAAACCGATTAACAGTAACATTAGATGTATTTAAATATACTGGATTTGAAGAAGTATCTTGGGGTAATAGTGGATTAACAGTAACATTAGATGTATTTAAATAGTGAAGTTATTACTAGAGTTGCAGTTTACGATAGTGATTAACAGTAACATTAGATGTATTTAAATGCATATGCCGATACAGAGCATAGGTTAAATGATAAAGATTAACAGTAACATTAGATGTATTTAAATCTCCAAATTACACAAAAAATACTATATTAGAAAAAGATTAACAGTAACATTAGATGTATTTAAATCAGGAGCTGTAATACCAGCTTTGATAGCATTAAGGATTAACAGTAACATTAGATGTATTTAAATGATATGAAATATCAATTCTAGATAAAAATAATGTGATTAACAGTAACATTAGATGTATTTAAATTTTCCCCATTGGCGTGCACTATTCATTTTTCTTTCTGATTAACAGTAACATTAGATGTATTTAAATATAAAATACCCTTTAAGATAGGTCGGCTATCATCGATTAACAGTAACATTAGATGTATTTAAATAGAAACTCCAATATCTATATGTAGAAAGTTAGGTGGATTAACAGTAACATTAGATGTATTTAAATAATAAAATTGCTATTTTACTTCTACTTACTACCCGATTAACAGTAACATTAGATGTATTTAAATTAATACCAATCAAGATATGAATTTTTTTCTTGTATGATTAACAGTAACATTAGATGTATTTAAATGCATAAAAATCTATTTCGCTTTTTGTTTTTCCGAGATTAACAGTAACATTAGATGTATTTAAATCAAGGAAGAAATATGGTTATGATAAACGGAGGACAAGATTAACAGTAACATTAGATGTATTTAAATAAACCATACAGAACATTTTAAAATAATTTATACCACGATTAACAGTAACATTAGATGTATTTAAATTTAGCAAGGTAGAAAAATTCTCCACCCTGCTTACCGATTAACAGTAACATTAGATGTATTTAAATGTTATTCCAGTTATAACCGTTGAGCTATCACTTCGATTAACAGTAACATTAGATGTATTTAAATAAAGCACAATCTTTAGGAACAGATAAAGTCAATGAAGATTAACAGTAACATTAGATGTATTTAAATTTTAGTTTAAATCATACAACTCCTTATAGTGGCAGATTAACAGTAACATTAGATGTATTTAAATATATAATTGGGTATCAAATATGGAACAAGAAGCAAAGGATTAACAGTAACATTAGATGTATTTAAATCCTTAAAACCAAAGGTGAGGATTGGAAAATGATAGATTAACAGTAACATTAGATGTATTTAAATCCATTTTAACACCAAAGTTTTAGTTAACTATACACCAAGATTAACAGTAACATTAGATGTATTTAAATGGGCTATATTACAGATAGATATACAAGCTTTACACCGATTAACAGTAACATTAGATGTATTTAAATAATTTAACCTTGATACTGAAAAGTATGGAAGTGTATGATTAACAGTAACATTAGATGTATTTAAATAAAAGAAAATGATAAAAATATAAGTGGTTATATTATGATTAACAGTAACATTAGATGTATTTAAATGGAAATCCATGTCAATACGCTAGTTTTCAGACAGCGATTAACAGTAACATTAGATGTATTTAAATAAATATCTAGTTGTTATATTTTTCATTTTAAGCATTGATTAACAGTAACATTAGATGTATTTAAATGGGAATACTGCAAATAAAAAAGTAAGAACTTTACCGATTAACAGTAACATTAGATGTATTTAAATAGACATGAACCTATTTTATCACCACGCTTTTTAAGATTAACAGTAACATTAGATGTATTTAAATGGCAAAACTGAAACCTTAGGAAACTCTAAAACTTGAGATTAACAGTAACATTAGATGTATTTAAATGAAAGTAATTGTGAAAAAGGAATTTTAAAGTTGTGTGATTAACAGTAACATTAGATGTATTTAAATAGAAAACTTTACGCAAGAAGCTCTCGCTGAATCTTTGATTAACAGTAACATTAGATGTATTTAAATAAATGATTGACTTAATAATACCTATTACAAGGTCGGATTAACAGTAACATTAGATGTATTTAAATTAACATCTTCTTAGCATTCCTCTCCAATATTCATAAGGATTAACAGTAACATTAGATGTATTTAAATGATATAACATTAGAACCAGATAGTGGAGAAGGAAGATTAACAGTAACATTAGATGTATTTAAATGAAGAAGACAACAGAGAACTTTTATGTAAAGAGGATTAACAGTAACATTAGATGTATTTAAATGACAAATATTCAGTTAATTTATATAAGTTTTTAAGATTAACAGTAACATTAGATGTATTTAAATGATGATGATAATAATGATGATGATAAGCTATTTAAGATTAACAGTAACATTAGATGTATTTAAATAGAAGTGGACTAGAAGAAGTAGTAAATAAATTAAGATTAACAGTAACATTAGATGTATTTAAATAATATCTGCATAAGGTGCAGCAGCTCTACACTCGTTGATTAACAGTAACATTAGATGTATTTAAATGGTGGAAATTTTGAACAGCTTTCTTTTGAAACATTTGATTAACAGTAACATTAGATGTATTTAAATTATAATCATCCTCTCTTATAGCTTATGAACGAATTTGATTAACAGTAACATTAGATGTATTTAAATAACTGGGAATTAGCTCCATGTGCTGATACAACAAAAGATTAACAGTAACATTAGATGTATTTAAATTGTTTAATTACTGCTGCTATCAAATTAGGATCAACGATTAACAGTAACATTAGATGTATTTAAATGCAAATTTATTCTCTAATGCATTAAAAGCACTTGGCGATTAACAGTAACATTAGATGTATTTAAATTTAGAAAAAGATTTAGATAGTAGGATATGGGAAGAGATTAACAGTAACATTAGATGTATTTAAATGAGGATGCACTGAAAGAGATAAGAAAAATATAAGAGCGATTAACAGTAACATTAGATGTATTTAAATGTTGGAGAATCTGTTGTGCTAAATTTATTACTACTGATTAACAGTAACATTAGATGTATTTAAATCTACATGTATTTTTTACACCTTCCCATGTTTCACCGATTAACAGTAACATTAGATGTATTTAAATATGTATCATATCCACTTTCACCTAAATCAAATCTTGGATTAACAGTAACATTAGATGTATTTAAATTAACTATAAGCTCTTAACACACAACCGCCTTTAAGATTAACAGTAACATTAGATGTATTTAAATTGATATCTTTCTTCTTCCGGAGCCTGAACTCCTCCGATTAACAGTAACATTAGATGTATTTAAATATCCACCCTTGATAGAACTTAGTTTCCTTCTGAGGATTAACAGTAACATTAGATGTATTTAAATATCTTTCTAATCATAATTGTTTCAATGTCTTCTAATGATTAACAGTAACATTAGATGTATTTAGATGGGTTAGCAGAAAAAGGATTTTAATAGAGAATTAACGATTAACAGGAACTAGATTGTCAACACCTT

>NZ_CP013238|3|1|676959-682147|PILER-CR
GATTAACAGTAACATTAGATGTATTTAAAT	TGGGTTGAAGGTGGAGACACAGATAAAGATATTGCA
GATTAACAGTAACATTAGATGTATTTAAAT	GCAAATTTATTCTCTAATGCATTAAAAGCACTTGG
GATTAACAGTAACATTAGATGTATTTAAAT	TAAAACAGAAGAAGCTAAAGAAGGATTTAGTTGGG
GATTAACAGTAACATTAGATGTATTTAAAT	GGAAAAGCACCTAATATAGCAATAGGAGGATTAGA
GATTAACAGTAACATTAGATGTATTTAAAT	GCTGTAACAGAAATAGAAACAGTTGTTAATACTGGT
GATTAACAGTAACATTAGATGTATTTAAAT	GAACTGGACCATTTCACCTCTAAAGCTGCCGGTGT
GATTAACAGTAACATTAGATGTATTTAAAT	TTATTATAAACAGACAGGTGATATTGCTACTCTG
GATTAACAGTAACATTAGATGTATTTAAAT	GGTCTACCTCTGTATATAGAACCATCTAACCTTATA
GATTAACAGTAACATTAGATGTATTTAAAT	TAATTAATAGCCATGAAGTACCTAATATCATTTT
GATTAACAGTAACATTAGATGTATTTAAAT	TGTTTTAAGTTATCTAACGATGTTTCTGCATAAAT
GATTAACAGTAACATTAGATGTATTTAAAT	TTATATATTATTTCTCCCTTATTTCCATTATTGA
GATTAACAGTAACATTAGATGTATTTAAAT	GATAATAATTTACTTGAATATTTAAATGGAGCTG
GATTAACAGTAACATTAGATGTATTTAAAT	AAAGAATGGCTATTTTCCTTACTTTCTTGAACCTGG
GATTAACAGTAACATTAGATGTATTTAAAT	GTTAGATTATCTCCCTATTAGGGGATTTTATAACG
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTTTGGAAGTACATTAGGGAAAGGTCTTACTG
GATTAACAGTAACATTAGATGTATTTAAAT	TAGCAGAGAAAATATAAAATCATTACCAGCATATGC
GATTAACAGTAACATTAGATGTATTTAAAT	AACTATTAAAGAATTCGAAGATAATGTAGAAATTAT
GATTAACAGTAACATTAGATGTATTTAAAT	ATTACATTTTCTAAATAAATAAAATAAATAAAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GAAGATAAAGGAACACCATAAGGGATATTATCAA
GATTAACAGTAACATTAGATGTATTTAAAT	ATAGATGAAAAACAAAAGCGATTAAAAACACTATT
GATTAACAGTAACATTAGATGTATTTAAAT	TGTGGATCAAACATGCAAATGAGATATGGTCCCAAA
GATTAACAGTAACATTAGATGTATTTAAAT	AGCAGCACTGAAATGCAGATGAATGAAAATAAGAT
GATTAACAGTAACATTAGATGTATTTAAAT	AATAGAAATCGATAAAGGAACGTGTATAGCATGTGG
GATTAACAGTAACATTAGATGTATTTAAAT	TGGGCAGTAGGACATTTATTACAACTTAAAGATATA
GATTAACAGTAACATTAGATGTATTTAAAT	AGTAAAGATTTAATAATGTTTTTAACAAGCGTTGC
GATTAACAGTAACATTAGATGTATTTAAAT	AGCATGCCCACCTGAACCTCCTTTGTTAAAAGTTACT
GATTAACAGTAACATTAGATGTATTTAAAT	GGATTAACTGGTAAAATAAAAAATAAATCAGAAA
GATTAACAGTAACATTAGATGTATTTAAAT	ACAGTTTAGAATAATAGATAAAGATACATCTAATGA
GATTAACAGTAACATTAGATGTATTTAAAT	GACAGATTTATTAAAAATGGAGCTGGCTGAAAATA
GATTAACAGTAACATTAGATGTATTTAAAT	GTTGCTTGGAAGAAATTACTACCATTACCAGCTGT
GATTAACAGTAACATTAGATGTATTTAAAT	AAAATATTCTCTATGAGTAGACAACCAAAAATAAGA
GATTAACAGTAACATTAGATGTATTTAAAT	TAATGAACATATGAGATATAATTGGGTAGAAATT
GATTAACAGTAACATTAGATGTATTTAAAT	TCTAGTATATTCCAATTTAAGCCATCATTTGATCC
GATTAACAGTAACATTAGATGTATTTAAAT	TACCTTGAGCGATATAATGTATATCAGTAGAATCAA
GATTAACAGTAACATTAGATGTATTTAAAT	AAGAATCCCATATATACTGGTTCTACATATTTACTA
GATTAACAGTAACATTAGATGTATTTAAAT	TTAAGTTGAACTAAAAAACTTGTATTACACTTCTAG
GATTAACAGTAACATTAGATGTATTTAAAT	ATATTAAAATAATCCATTAAAGATTGATTGATTAAAC
GATTAACAGTAACATTAGATGTATTTAAAT	ACTAACTACCCAAGTGATTATTATTATCCAGATGAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGAGATAGTTTTTTATAAGTTTTAGATAATTTAATCA
GATTAACAGTAACATTAGATGTATTTAAAT	TACATTAACATGCAGAGCAGTTGAGGAGGGTGAGGCT
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTTTGGAAGCACATTAGGAAAAGGTCTTACTGCAC
GATTAACAGTAACATTAGATGTATTTAAAT	GAAAGCGAAAAAGAAAGATTAGATGAGTTATCATC
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTCATTTTCACATTTTAAGCCATACAGTAAACC
GATTAACAGTAACATTAGATGTATTTAAAT	ATACTGGATTTGAAGAAGTATCTTGGGGTAATAGTG
GATTAACAGTAACATTAGATGTATTTAAAT	AGTGAAGTTATTACTAGAGTTGCAGTTTACGATAGT
GATTAACAGTAACATTAGATGTATTTAAAT	GCATATGCCGATACAGAGCATAGGTTAAATGATAAA
GATTAACAGTAACATTAGATGTATTTAAAT	CTCCAAATTACACAAAAAATACTATATTAGAAAAA
GATTAACAGTAACATTAGATGTATTTAAAT	CAGGAGCTGTAATACCAGCTTTGATAGCATTAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GATATGAAATATCAATTCTAGATAAAAATAATGT
GATTAACAGTAACATTAGATGTATTTAAAT	TTTCCCCATTGGCGTGCACTATTCATTTTTCTTTCT
GATTAACAGTAACATTAGATGTATTTAAAT	ATAAAATACCCTTTAAGATAGGTCGGCTATCATC
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAACTCCAATATCTATATGTAGAAAGTTAGGTG
GATTAACAGTAACATTAGATGTATTTAAAT	AATAAAATTGCTATTTTACTTCTACTTACTACCC
GATTAACAGTAACATTAGATGTATTTAAAT	TAATACCAATCAAGATATGAATTTTTTTCTTGTAT
GATTAACAGTAACATTAGATGTATTTAAAT	GCATAAAAATCTATTTCGCTTTTTGTTTTTCCGA
GATTAACAGTAACATTAGATGTATTTAAAT	CAAGGAAGAAATATGGTTATGATAAACGGAGGACAA
GATTAACAGTAACATTAGATGTATTTAAAT	AAACCATACAGAACATTTTAAAATAATTTATACCAC
GATTAACAGTAACATTAGATGTATTTAAAT	TTAGCAAGGTAGAAAAATTCTCCACCCTGCTTACC
GATTAACAGTAACATTAGATGTATTTAAAT	GTTATTCCAGTTATAACCGTTGAGCTATCACTTC
GATTAACAGTAACATTAGATGTATTTAAAT	AAAGCACAATCTTTAGGAACAGATAAAGTCAATGAA
GATTAACAGTAACATTAGATGTATTTAAAT	TTTAGTTTAAATCATACAACTCCTTATAGTGGCA
GATTAACAGTAACATTAGATGTATTTAAAT	ATATAATTGGGTATCAAATATGGAACAAGAAGCAAAG
GATTAACAGTAACATTAGATGTATTTAAAT	CCTTAAAACCAAAGGTGAGGATTGGAAAATGATA
GATTAACAGTAACATTAGATGTATTTAAAT	CCATTTTAACACCAAAGTTTTAGTTAACTATACACCAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGGCTATATTACAGATAGATATACAAGCTTTACACC
GATTAACAGTAACATTAGATGTATTTAAAT	AATTTAACCTTGATACTGAAAAGTATGGAAGTGTAT
GATTAACAGTAACATTAGATGTATTTAAAT	AAAAGAAAATGATAAAAATATAAGTGGTTATATTAT
GATTAACAGTAACATTAGATGTATTTAAAT	GGAAATCCATGTCAATACGCTAGTTTTCAGACAGC
GATTAACAGTAACATTAGATGTATTTAAAT	AAATATCTAGTTGTTATATTTTTCATTTTAAGCATT
GATTAACAGTAACATTAGATGTATTTAAAT	GGGAATACTGCAAATAAAAAAGTAAGAACTTTACC
GATTAACAGTAACATTAGATGTATTTAAAT	AGACATGAACCTATTTTATCACCACGCTTTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGCAAAACTGAAACCTTAGGAAACTCTAAAACTTGA
GATTAACAGTAACATTAGATGTATTTAAAT	GAAAGTAATTGTGAAAAAGGAATTTTAAAGTTGTGT
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAAACTTTACGCAAGAAGCTCTCGCTGAATCTTT
GATTAACAGTAACATTAGATGTATTTAAAT	AAATGATTGACTTAATAATACCTATTACAAGGTCG
GATTAACAGTAACATTAGATGTATTTAAAT	TAACATCTTCTTAGCATTCCTCTCCAATATTCATAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GATATAACATTAGAACCAGATAGTGGAGAAGGAA
GATTAACAGTAACATTAGATGTATTTAAAT	GAAGAAGACAACAGAGAACTTTTATGTAAAGAG
GATTAACAGTAACATTAGATGTATTTAAAT	GACAAATATTCAGTTAATTTATATAAGTTTTTAA
GATTAACAGTAACATTAGATGTATTTAAATGATGATGATAATAATGATGATGATAAGCTATTTAAGATTAACAGTAACATTAGATGTATTTAAAT	AGAAGTGGACTAGAAGAAGTAGTAAATAAATTAA
GATTAACAGTAACATTAGATGTATTTAAAT	AATATCTGCATAAGGTGCAGCAGCTCTACACTCGTT
GATTAACAGTAACATTAGATGTATTTAAAT	GGTGGAAATTTTGAACAGCTTTCTTTTGAAACATTT
GATTAACAGTAACATTAGATGTATTTAAAT	TATAATCATCCTCTCTTATAGCTTATGAACGAATTT
GATTAACAGTAACATTAGATGTATTTAAAT	AACTGGGAATTAGCTCCATGTGCTGATACAACAAAA
GATTAACAGTAACATTAGATGTATTTAAAT	TGTTTAATTACTGCTGCTATCAAATTAGGATCAAC
GATTAACAGTAACATTAGATGTATTTAAAT	GCAAATTTATTCTCTAATGCATTAAAAGCACTTGGC
GATTAACAGTAACATTAGATGTATTTAAAT	TTAGAAAAAGATTTAGATAGTAGGATATGGGAAGA
GATTAACAGTAACATTAGATGTATTTAAAT	GAGGATGCACTGAAAGAGATAAGAAAAATATAAGAGC
GATTAACAGTAACATTAGATGTATTTAAAT	GTTGGAGAATCTGTTGTGCTAAATTTATTACTACT
GATTAACAGTAACATTAGATGTATTTAAAT	CTACATGTATTTTTTACACCTTCCCATGTTTCACC
GATTAACAGTAACATTAGATGTATTTAAAT	ATGTATCATATCCACTTTCACCTAAATCAAATCTTG
GATTAACAGTAACATTAGATGTATTTAAAT	TAACTATAAGCTCTTAACACACAACCGCCTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	TGATATCTTTCTTCTTCCGGAGCCTGAACTCCTCC
GATTAACAGTAACATTAGATGTATTTAAAT	ATCCACCCTTGATAGAACTTAGTTTCCTTCTGAG


>NZ_CP013238|3|3|676959-683258|CRISPRCasFinder
GATTAACAGTAACATTAGATGTATTTAAAT	TGGGTTGAAGGTGGAGACACAGATAAAGATATTGCA
GATTAACAGTAACATTAGATGTATTTAAAT	GCAAATTTATTCTCTAATGCATTAAAAGCACTTGG
GATTAACAGTAACATTAGATGTATTTAAAT	TAAAACAGAAGAAGCTAAAGAAGGATTTAGTTGGG
GATTAACAGTAACATTAGATGTATTTAAAT	GGAAAAGCACCTAATATAGCAATAGGAGGATTAGA
GATTAACAGTAACATTAGATGTATTTAAAT	GCTGTAACAGAAATAGAAACAGTTGTTAATACTGGT
GATTAACAGTAACATTAGATGTATTTAAAT	GAACTGGACCATTTCACCTCTAAAGCTGCCGGTGT
GATTAACAGTAACATTAGATGTATTTAAAT	TTATTATAAACAGACAGGTGATATTGCTACTCTG
GATTAACAGTAACATTAGATGTATTTAAAT	GGTCTACCTCTGTATATAGAACCATCTAACCTTATA
GATTAACAGTAACATTAGATGTATTTAAAT	TAATTAATAGCCATGAAGTACCTAATATCATTTT
GATTAACAGTAACATTAGATGTATTTAAAT	TGTTTTAAGTTATCTAACGATGTTTCTGCATAAAT
GATTAACAGTAACATTAGATGTATTTAAAT	TTATATATTATTTCTCCCTTATTTCCATTATTGA
GATTAACAGTAACATTAGATGTATTTAAAT	GATAATAATTTACTTGAATATTTAAATGGAGCTG
GATTAACAGTAACATTAGATGTATTTAAAT	AAAGAATGGCTATTTTCCTTACTTTCTTGAACCTGG
GATTAACAGTAACATTAGATGTATTTAAAT	GTTAGATTATCTCCCTATTAGGGGATTTTATAACG
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTTTGGAAGTACATTAGGGAAAGGTCTTACTG
GATTAACAGTAACATTAGATGTATTTAAAT	TAGCAGAGAAAATATAAAATCATTACCAGCATATGC
GATTAACAGTAACATTAGATGTATTTAAAT	AACTATTAAAGAATTCGAAGATAATGTAGAAATTAT
GATTAACAGTAACATTAGATGTATTTAAAT	ATTACATTTTCTAAATAAATAAAATAAATAAAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GAAGATAAAGGAACACCATAAGGGATATTATCAA
GATTAACAGTAACATTAGATGTATTTAAAT	ATAGATGAAAAACAAAAGCGATTAAAAACACTATT
GATTAACAGTAACATTAGATGTATTTAAAT	TGTGGATCAAACATGCAAATGAGATATGGTCCCAAA
GATTAACAGTAACATTAGATGTATTTAAAT	AGCAGCACTGAAATGCAGATGAATGAAAATAAGAT
GATTAACAGTAACATTAGATGTATTTAAAT	AATAGAAATCGATAAAGGAACGTGTATAGCATGTGG
GATTAACAGTAACATTAGATGTATTTAAAT	TGGGCAGTAGGACATTTATTACAACTTAAAGATATA
GATTAACAGTAACATTAGATGTATTTAAAT	AGTAAAGATTTAATAATGTTTTTAACAAGCGTTGC
GATTAACAGTAACATTAGATGTATTTAAAT	AGCATGCCCACCTGAACCTCCTTTGTTAAAAGTTACT
GATTAACAGTAACATTAGATGTATTTAAAT	GGATTAACTGGTAAAATAAAAAATAAATCAGAAA
GATTAACAGTAACATTAGATGTATTTAAAT	ACAGTTTAGAATAATAGATAAAGATACATCTAATGA
GATTAACAGTAACATTAGATGTATTTAAAT	GACAGATTTATTAAAAATGGAGCTGGCTGAAAATA
GATTAACAGTAACATTAGATGTATTTAAAT	GTTGCTTGGAAGAAATTACTACCATTACCAGCTGT
GATTAACAGTAACATTAGATGTATTTAAAT	AAAATATTCTCTATGAGTAGACAACCAAAAATAAGA
GATTAACAGTAACATTAGATGTATTTAAAT	TAATGAACATATGAGATATAATTGGGTAGAAATT
GATTAACAGTAACATTAGATGTATTTAAAT	TCTAGTATATTCCAATTTAAGCCATCATTTGATCC
GATTAACAGTAACATTAGATGTATTTAAAT	TACCTTGAGCGATATAATGTATATCAGTAGAATCAA
GATTAACAGTAACATTAGATGTATTTAAAT	AAGAATCCCATATATACTGGTTCTACATATTTACTA
GATTAACAGTAACATTAGATGTATTTAAAT	TTAAGTTGAACTAAAAAACTTGTATTACACTTCTAG
GATTAACAGTAACATTAGATGTATTTAAAT	ATATTAAAATAATCCATTAAAGATTGATTGATTAAAC
GATTAACAGTAACATTAGATGTATTTAAAT	ACTAACTACCCAAGTGATTATTATTATCCAGATGAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGAGATAGTTTTTTATAAGTTTTAGATAATTTAATCA
GATTAACAGTAACATTAGATGTATTTAAAT	TACATTAACATGCAGAGCAGTTGAGGAGGGTGAGGCT
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTTTGGAAGCACATTAGGAAAAGGTCTTACTGCAC
GATTAACAGTAACATTAGATGTATTTAAAT	GAAAGCGAAAAAGAAAGATTAGATGAGTTATCATC
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTCATTTTCACATTTTAAGCCATACAGTAAACC
GATTAACAGTAACATTAGATGTATTTAAAT	ATACTGGATTTGAAGAAGTATCTTGGGGTAATAGTG
GATTAACAGTAACATTAGATGTATTTAAAT	AGTGAAGTTATTACTAGAGTTGCAGTTTACGATAGT
GATTAACAGTAACATTAGATGTATTTAAAT	GCATATGCCGATACAGAGCATAGGTTAAATGATAAA
GATTAACAGTAACATTAGATGTATTTAAAT	CTCCAAATTACACAAAAAATACTATATTAGAAAAA
GATTAACAGTAACATTAGATGTATTTAAAT	CAGGAGCTGTAATACCAGCTTTGATAGCATTAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GATATGAAATATCAATTCTAGATAAAAATAATGT
GATTAACAGTAACATTAGATGTATTTAAAT	TTTCCCCATTGGCGTGCACTATTCATTTTTCTTTCT
GATTAACAGTAACATTAGATGTATTTAAAT	ATAAAATACCCTTTAAGATAGGTCGGCTATCATC
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAACTCCAATATCTATATGTAGAAAGTTAGGTG
GATTAACAGTAACATTAGATGTATTTAAAT	AATAAAATTGCTATTTTACTTCTACTTACTACCC
GATTAACAGTAACATTAGATGTATTTAAAT	TAATACCAATCAAGATATGAATTTTTTTCTTGTAT
GATTAACAGTAACATTAGATGTATTTAAAT	GCATAAAAATCTATTTCGCTTTTTGTTTTTCCGA
GATTAACAGTAACATTAGATGTATTTAAAT	CAAGGAAGAAATATGGTTATGATAAACGGAGGACAA
GATTAACAGTAACATTAGATGTATTTAAAT	AAACCATACAGAACATTTTAAAATAATTTATACCAC
GATTAACAGTAACATTAGATGTATTTAAAT	TTAGCAAGGTAGAAAAATTCTCCACCCTGCTTACC
GATTAACAGTAACATTAGATGTATTTAAAT	GTTATTCCAGTTATAACCGTTGAGCTATCACTTC
GATTAACAGTAACATTAGATGTATTTAAAT	AAAGCACAATCTTTAGGAACAGATAAAGTCAATGAA
GATTAACAGTAACATTAGATGTATTTAAAT	TTTAGTTTAAATCATACAACTCCTTATAGTGGCA
GATTAACAGTAACATTAGATGTATTTAAAT	ATATAATTGGGTATCAAATATGGAACAAGAAGCAAAG
GATTAACAGTAACATTAGATGTATTTAAAT	CCTTAAAACCAAAGGTGAGGATTGGAAAATGATA
GATTAACAGTAACATTAGATGTATTTAAAT	CCATTTTAACACCAAAGTTTTAGTTAACTATACACCAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGGCTATATTACAGATAGATATACAAGCTTTACACC
GATTAACAGTAACATTAGATGTATTTAAAT	AATTTAACCTTGATACTGAAAAGTATGGAAGTGTAT
GATTAACAGTAACATTAGATGTATTTAAAT	AAAAGAAAATGATAAAAATATAAGTGGTTATATTAT
GATTAACAGTAACATTAGATGTATTTAAAT	GGAAATCCATGTCAATACGCTAGTTTTCAGACAGC
GATTAACAGTAACATTAGATGTATTTAAAT	AAATATCTAGTTGTTATATTTTTCATTTTAAGCATT
GATTAACAGTAACATTAGATGTATTTAAAT	GGGAATACTGCAAATAAAAAAGTAAGAACTTTACC
GATTAACAGTAACATTAGATGTATTTAAAT	AGACATGAACCTATTTTATCACCACGCTTTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGCAAAACTGAAACCTTAGGAAACTCTAAAACTTGA
GATTAACAGTAACATTAGATGTATTTAAAT	GAAAGTAATTGTGAAAAAGGAATTTTAAAGTTGTGT
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAAACTTTACGCAAGAAGCTCTCGCTGAATCTTT
GATTAACAGTAACATTAGATGTATTTAAAT	AAATGATTGACTTAATAATACCTATTACAAGGTCG
GATTAACAGTAACATTAGATGTATTTAAAT	TAACATCTTCTTAGCATTCCTCTCCAATATTCATAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GATATAACATTAGAACCAGATAGTGGAGAAGGAA
GATTAACAGTAACATTAGATGTATTTAAAT	GAAGAAGACAACAGAGAACTTTTATGTAAAGAG
GATTAACAGTAACATTAGATGTATTTAAAT	GACAAATATTCAGTTAATTTATATAAGTTTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	GATGATGATAATAATGATGATGATAAGCTATTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAGTGGACTAGAAGAAGTAGTAAATAAATTAA
GATTAACAGTAACATTAGATGTATTTAAAT	AATATCTGCATAAGGTGCAGCAGCTCTACACTCGTT
GATTAACAGTAACATTAGATGTATTTAAAT	GGTGGAAATTTTGAACAGCTTTCTTTTGAAACATTT
GATTAACAGTAACATTAGATGTATTTAAAT	TATAATCATCCTCTCTTATAGCTTATGAACGAATTT
GATTAACAGTAACATTAGATGTATTTAAAT	AACTGGGAATTAGCTCCATGTGCTGATACAACAAAA
GATTAACAGTAACATTAGATGTATTTAAAT	TGTTTAATTACTGCTGCTATCAAATTAGGATCAAC
GATTAACAGTAACATTAGATGTATTTAAAT	GCAAATTTATTCTCTAATGCATTAAAAGCACTTGGC
GATTAACAGTAACATTAGATGTATTTAAAT	TTAGAAAAAGATTTAGATAGTAGGATATGGGAAGA
GATTAACAGTAACATTAGATGTATTTAAAT	GAGGATGCACTGAAAGAGATAAGAAAAATATAAGAGC
GATTAACAGTAACATTAGATGTATTTAAAT	GTTGGAGAATCTGTTGTGCTAAATTTATTACTACT
GATTAACAGTAACATTAGATGTATTTAAAT	CTACATGTATTTTTTACACCTTCCCATGTTTCACC
GATTAACAGTAACATTAGATGTATTTAAAT	ATGTATCATATCCACTTTCACCTAAATCAAATCTTG
GATTAACAGTAACATTAGATGTATTTAAAT	TAACTATAAGCTCTTAACACACAACCGCCTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	TGATATCTTTCTTCTTCCGGAGCCTGAACTCCTCC
GATTAACAGTAACATTAGATGTATTTAAAT	ATCCACCCTTGATAGAACTTAGTTTCCTTCTGAG
GATTAACAGTAACATTAGATGTATTTAAAT	ATCTTTCTAATCATAATTGTTTCAATGTCTTCTAAT
GATTAACAGTAACATTAGATGTATTTAGAT

>NZ_CP013238|3|1|676959-683324|CRT
GATTAACAGTAACATTAGATGTATTTAAAT	TGGGTTGAAGGTGGAGACACAGATAAAGATATTGCA
GATTAACAGTAACATTAGATGTATTTAAAT	GCAAATTTATTCTCTAATGCATTAAAAGCACTTGG
GATTAACAGTAACATTAGATGTATTTAAAT	TAAAACAGAAGAAGCTAAAGAAGGATTTAGTTGGG
GATTAACAGTAACATTAGATGTATTTAAAT	GGAAAAGCACCTAATATAGCAATAGGAGGATTAGA
GATTAACAGTAACATTAGATGTATTTAAAT	GCTGTAACAGAAATAGAAACAGTTGTTAATACTGGT
GATTAACAGTAACATTAGATGTATTTAAAT	GAACTGGACCATTTCACCTCTAAAGCTGCCGGTGT
GATTAACAGTAACATTAGATGTATTTAAAT	TTATTATAAACAGACAGGTGATATTGCTACTCTG
GATTAACAGTAACATTAGATGTATTTAAAT	GGTCTACCTCTGTATATAGAACCATCTAACCTTATA
GATTAACAGTAACATTAGATGTATTTAAAT	TAATTAATAGCCATGAAGTACCTAATATCATTTT
GATTAACAGTAACATTAGATGTATTTAAAT	TGTTTTAAGTTATCTAACGATGTTTCTGCATAAAT
GATTAACAGTAACATTAGATGTATTTAAAT	TTATATATTATTTCTCCCTTATTTCCATTATTGA
GATTAACAGTAACATTAGATGTATTTAAAT	GATAATAATTTACTTGAATATTTAAATGGAGCTG
GATTAACAGTAACATTAGATGTATTTAAAT	AAAGAATGGCTATTTTCCTTACTTTCTTGAACCTGG
GATTAACAGTAACATTAGATGTATTTAAAT	GTTAGATTATCTCCCTATTAGGGGATTTTATAACG
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTTTGGAAGTACATTAGGGAAAGGTCTTACTG
GATTAACAGTAACATTAGATGTATTTAAAT	TAGCAGAGAAAATATAAAATCATTACCAGCATATGC
GATTAACAGTAACATTAGATGTATTTAAAT	AACTATTAAAGAATTCGAAGATAATGTAGAAATTAT
GATTAACAGTAACATTAGATGTATTTAAAT	ATTACATTTTCTAAATAAATAAAATAAATAAAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GAAGATAAAGGAACACCATAAGGGATATTATCAA
GATTAACAGTAACATTAGATGTATTTAAAT	ATAGATGAAAAACAAAAGCGATTAAAAACACTATT
GATTAACAGTAACATTAGATGTATTTAAAT	TGTGGATCAAACATGCAAATGAGATATGGTCCCAAA
GATTAACAGTAACATTAGATGTATTTAAAT	AGCAGCACTGAAATGCAGATGAATGAAAATAAGAT
GATTAACAGTAACATTAGATGTATTTAAAT	AATAGAAATCGATAAAGGAACGTGTATAGCATGTGG
GATTAACAGTAACATTAGATGTATTTAAAT	TGGGCAGTAGGACATTTATTACAACTTAAAGATATA
GATTAACAGTAACATTAGATGTATTTAAAT	AGTAAAGATTTAATAATGTTTTTAACAAGCGTTGC
GATTAACAGTAACATTAGATGTATTTAAAT	AGCATGCCCACCTGAACCTCCTTTGTTAAAAGTTACT
GATTAACAGTAACATTAGATGTATTTAAAT	GGATTAACTGGTAAAATAAAAAATAAATCAGAAA
GATTAACAGTAACATTAGATGTATTTAAAT	ACAGTTTAGAATAATAGATAAAGATACATCTAATGA
GATTAACAGTAACATTAGATGTATTTAAAT	GACAGATTTATTAAAAATGGAGCTGGCTGAAAATA
GATTAACAGTAACATTAGATGTATTTAAAT	GTTGCTTGGAAGAAATTACTACCATTACCAGCTGT
GATTAACAGTAACATTAGATGTATTTAAAT	AAAATATTCTCTATGAGTAGACAACCAAAAATAAGA
GATTAACAGTAACATTAGATGTATTTAAAT	TAATGAACATATGAGATATAATTGGGTAGAAATT
GATTAACAGTAACATTAGATGTATTTAAAT	TCTAGTATATTCCAATTTAAGCCATCATTTGATCC
GATTAACAGTAACATTAGATGTATTTAAAT	TACCTTGAGCGATATAATGTATATCAGTAGAATCAA
GATTAACAGTAACATTAGATGTATTTAAAT	AAGAATCCCATATATACTGGTTCTACATATTTACTA
GATTAACAGTAACATTAGATGTATTTAAAT	TTAAGTTGAACTAAAAAACTTGTATTACACTTCTAG
GATTAACAGTAACATTAGATGTATTTAAAT	ATATTAAAATAATCCATTAAAGATTGATTGATTAAAC
GATTAACAGTAACATTAGATGTATTTAAAT	ACTAACTACCCAAGTGATTATTATTATCCAGATGAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGAGATAGTTTTTTATAAGTTTTAGATAATTTAATCA
GATTAACAGTAACATTAGATGTATTTAAAT	TACATTAACATGCAGAGCAGTTGAGGAGGGTGAGGCT
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTTTGGAAGCACATTAGGAAAAGGTCTTACTGCAC
GATTAACAGTAACATTAGATGTATTTAAAT	GAAAGCGAAAAAGAAAGATTAGATGAGTTATCATC
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTCATTTTCACATTTTAAGCCATACAGTAAACC
GATTAACAGTAACATTAGATGTATTTAAAT	ATACTGGATTTGAAGAAGTATCTTGGGGTAATAGTG
GATTAACAGTAACATTAGATGTATTTAAAT	AGTGAAGTTATTACTAGAGTTGCAGTTTACGATAGT
GATTAACAGTAACATTAGATGTATTTAAAT	GCATATGCCGATACAGAGCATAGGTTAAATGATAAA
GATTAACAGTAACATTAGATGTATTTAAAT	CTCCAAATTACACAAAAAATACTATATTAGAAAAA
GATTAACAGTAACATTAGATGTATTTAAAT	CAGGAGCTGTAATACCAGCTTTGATAGCATTAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GATATGAAATATCAATTCTAGATAAAAATAATGT
GATTAACAGTAACATTAGATGTATTTAAAT	TTTCCCCATTGGCGTGCACTATTCATTTTTCTTTCT
GATTAACAGTAACATTAGATGTATTTAAAT	ATAAAATACCCTTTAAGATAGGTCGGCTATCATC
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAACTCCAATATCTATATGTAGAAAGTTAGGTG
GATTAACAGTAACATTAGATGTATTTAAAT	AATAAAATTGCTATTTTACTTCTACTTACTACCC
GATTAACAGTAACATTAGATGTATTTAAAT	TAATACCAATCAAGATATGAATTTTTTTCTTGTAT
GATTAACAGTAACATTAGATGTATTTAAAT	GCATAAAAATCTATTTCGCTTTTTGTTTTTCCGA
GATTAACAGTAACATTAGATGTATTTAAAT	CAAGGAAGAAATATGGTTATGATAAACGGAGGACAA
GATTAACAGTAACATTAGATGTATTTAAAT	AAACCATACAGAACATTTTAAAATAATTTATACCAC
GATTAACAGTAACATTAGATGTATTTAAAT	TTAGCAAGGTAGAAAAATTCTCCACCCTGCTTACC
GATTAACAGTAACATTAGATGTATTTAAAT	GTTATTCCAGTTATAACCGTTGAGCTATCACTTC
GATTAACAGTAACATTAGATGTATTTAAAT	AAAGCACAATCTTTAGGAACAGATAAAGTCAATGAA
GATTAACAGTAACATTAGATGTATTTAAAT	TTTAGTTTAAATCATACAACTCCTTATAGTGGCA
GATTAACAGTAACATTAGATGTATTTAAAT	ATATAATTGGGTATCAAATATGGAACAAGAAGCAAAG
GATTAACAGTAACATTAGATGTATTTAAAT	CCTTAAAACCAAAGGTGAGGATTGGAAAATGATA
GATTAACAGTAACATTAGATGTATTTAAAT	CCATTTTAACACCAAAGTTTTAGTTAACTATACACCAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGGCTATATTACAGATAGATATACAAGCTTTACACC
GATTAACAGTAACATTAGATGTATTTAAAT	AATTTAACCTTGATACTGAAAAGTATGGAAGTGTAT
GATTAACAGTAACATTAGATGTATTTAAAT	AAAAGAAAATGATAAAAATATAAGTGGTTATATTAT
GATTAACAGTAACATTAGATGTATTTAAAT	GGAAATCCATGTCAATACGCTAGTTTTCAGACAGC
GATTAACAGTAACATTAGATGTATTTAAAT	AAATATCTAGTTGTTATATTTTTCATTTTAAGCATT
GATTAACAGTAACATTAGATGTATTTAAAT	GGGAATACTGCAAATAAAAAAGTAAGAACTTTACC
GATTAACAGTAACATTAGATGTATTTAAAT	AGACATGAACCTATTTTATCACCACGCTTTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGCAAAACTGAAACCTTAGGAAACTCTAAAACTTGA
GATTAACAGTAACATTAGATGTATTTAAAT	GAAAGTAATTGTGAAAAAGGAATTTTAAAGTTGTGT
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAAACTTTACGCAAGAAGCTCTCGCTGAATCTTT
GATTAACAGTAACATTAGATGTATTTAAAT	AAATGATTGACTTAATAATACCTATTACAAGGTCG
GATTAACAGTAACATTAGATGTATTTAAAT	TAACATCTTCTTAGCATTCCTCTCCAATATTCATAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GATATAACATTAGAACCAGATAGTGGAGAAGGAA
GATTAACAGTAACATTAGATGTATTTAAAT	GAAGAAGACAACAGAGAACTTTTATGTAAAGAG
GATTAACAGTAACATTAGATGTATTTAAAT	GACAAATATTCAGTTAATTTATATAAGTTTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	GATGATGATAATAATGATGATGATAAGCTATTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAGTGGACTAGAAGAAGTAGTAAATAAATTAA
GATTAACAGTAACATTAGATGTATTTAAAT	AATATCTGCATAAGGTGCAGCAGCTCTACACTCGTT
GATTAACAGTAACATTAGATGTATTTAAAT	GGTGGAAATTTTGAACAGCTTTCTTTTGAAACATTT
GATTAACAGTAACATTAGATGTATTTAAAT	TATAATCATCCTCTCTTATAGCTTATGAACGAATTT
GATTAACAGTAACATTAGATGTATTTAAAT	AACTGGGAATTAGCTCCATGTGCTGATACAACAAAA
GATTAACAGTAACATTAGATGTATTTAAAT	TGTTTAATTACTGCTGCTATCAAATTAGGATCAAC
GATTAACAGTAACATTAGATGTATTTAAAT	GCAAATTTATTCTCTAATGCATTAAAAGCACTTGGC
GATTAACAGTAACATTAGATGTATTTAAAT	TTAGAAAAAGATTTAGATAGTAGGATATGGGAAGA
GATTAACAGTAACATTAGATGTATTTAAAT	GAGGATGCACTGAAAGAGATAAGAAAAATATAAGAGC
GATTAACAGTAACATTAGATGTATTTAAAT	GTTGGAGAATCTGTTGTGCTAAATTTATTACTACT
GATTAACAGTAACATTAGATGTATTTAAAT	CTACATGTATTTTTTACACCTTCCCATGTTTCACC
GATTAACAGTAACATTAGATGTATTTAAAT	ATGTATCATATCCACTTTCACCTAAATCAAATCTTG
GATTAACAGTAACATTAGATGTATTTAAAT	TAACTATAAGCTCTTAACACACAACCGCCTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	TGATATCTTTCTTCTTCCGGAGCCTGAACTCCTCC
GATTAACAGTAACATTAGATGTATTTAAAT	ATCCACCCTTGATAGAACTTAGTTTCCTTCTGAG
GATTAACAGTAACATTAGATGTATTTAAAT	ATCTTTCTAATCATAATTGTTTCAATGTCTTCTAAT
GATTAACAGTAACATTAGATGTATTTAGAT	GGGTTAGCAGAAAAAGGATTTTAATAGAGAATTAAC
GATTAACAGGAACTAGATTGTCAACACCTT

>NZ_CP013238|3|2|682183-683192|PILER-CR
	TGGGTTGAAGGTGGAGACACAGATAAAGATATTGCA
GATTAACAGTAACATTAGATGTATTTAAAT	GCAAATTTATTCTCTAATGCATTAAAAGCACTTGG
GATTAACAGTAACATTAGATGTATTTAAAT	TAAAACAGAAGAAGCTAAAGAAGGATTTAGTTGGG
GATTAACAGTAACATTAGATGTATTTAAAT	GGAAAAGCACCTAATATAGCAATAGGAGGATTAGA
GATTAACAGTAACATTAGATGTATTTAAAT	GCTGTAACAGAAATAGAAACAGTTGTTAATACTGGT
GATTAACAGTAACATTAGATGTATTTAAAT	GAACTGGACCATTTCACCTCTAAAGCTGCCGGTGT
GATTAACAGTAACATTAGATGTATTTAAAT	TTATTATAAACAGACAGGTGATATTGCTACTCTG
GATTAACAGTAACATTAGATGTATTTAAAT	GGTCTACCTCTGTATATAGAACCATCTAACCTTATA
GATTAACAGTAACATTAGATGTATTTAAAT	TAATTAATAGCCATGAAGTACCTAATATCATTTT
GATTAACAGTAACATTAGATGTATTTAAAT	TGTTTTAAGTTATCTAACGATGTTTCTGCATAAAT
GATTAACAGTAACATTAGATGTATTTAAAT	TTATATATTATTTCTCCCTTATTTCCATTATTGA
GATTAACAGTAACATTAGATGTATTTAAAT	GATAATAATTTACTTGAATATTTAAATGGAGCTG
GATTAACAGTAACATTAGATGTATTTAAAT	AAAGAATGGCTATTTTCCTTACTTTCTTGAACCTGG
GATTAACAGTAACATTAGATGTATTTAAAT	GTTAGATTATCTCCCTATTAGGGGATTTTATAACG
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTTTGGAAGTACATTAGGGAAAGGTCTTACTG
GATTAACAGTAACATTAGATGTATTTAAAT	TAGCAGAGAAAATATAAAATCATTACCAGCATATGC
GATTAACAGTAACATTAGATGTATTTAAAT	AACTATTAAAGAATTCGAAGATAATGTAGAAATTAT
GATTAACAGTAACATTAGATGTATTTAAAT	ATTACATTTTCTAAATAAATAAAATAAATAAAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GAAGATAAAGGAACACCATAAGGGATATTATCAA
GATTAACAGTAACATTAGATGTATTTAAAT	ATAGATGAAAAACAAAAGCGATTAAAAACACTATT
GATTAACAGTAACATTAGATGTATTTAAAT	TGTGGATCAAACATGCAAATGAGATATGGTCCCAAA
GATTAACAGTAACATTAGATGTATTTAAAT	AGCAGCACTGAAATGCAGATGAATGAAAATAAGAT
GATTAACAGTAACATTAGATGTATTTAAAT	AATAGAAATCGATAAAGGAACGTGTATAGCATGTGG
GATTAACAGTAACATTAGATGTATTTAAAT	TGGGCAGTAGGACATTTATTACAACTTAAAGATATA
GATTAACAGTAACATTAGATGTATTTAAAT	AGTAAAGATTTAATAATGTTTTTAACAAGCGTTGC
GATTAACAGTAACATTAGATGTATTTAAAT	AGCATGCCCACCTGAACCTCCTTTGTTAAAAGTTACT
GATTAACAGTAACATTAGATGTATTTAAAT	GGATTAACTGGTAAAATAAAAAATAAATCAGAAA
GATTAACAGTAACATTAGATGTATTTAAAT	ACAGTTTAGAATAATAGATAAAGATACATCTAATGA
GATTAACAGTAACATTAGATGTATTTAAAT	GACAGATTTATTAAAAATGGAGCTGGCTGAAAATA
GATTAACAGTAACATTAGATGTATTTAAAT	GTTGCTTGGAAGAAATTACTACCATTACCAGCTGT
GATTAACAGTAACATTAGATGTATTTAAAT	AAAATATTCTCTATGAGTAGACAACCAAAAATAAGA
GATTAACAGTAACATTAGATGTATTTAAAT	TAATGAACATATGAGATATAATTGGGTAGAAATT
GATTAACAGTAACATTAGATGTATTTAAAT	TCTAGTATATTCCAATTTAAGCCATCATTTGATCC
GATTAACAGTAACATTAGATGTATTTAAAT	TACCTTGAGCGATATAATGTATATCAGTAGAATCAA
GATTAACAGTAACATTAGATGTATTTAAAT	AAGAATCCCATATATACTGGTTCTACATATTTACTA
GATTAACAGTAACATTAGATGTATTTAAAT	TTAAGTTGAACTAAAAAACTTGTATTACACTTCTAG
GATTAACAGTAACATTAGATGTATTTAAAT	ATATTAAAATAATCCATTAAAGATTGATTGATTAAAC
GATTAACAGTAACATTAGATGTATTTAAAT	ACTAACTACCCAAGTGATTATTATTATCCAGATGAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGAGATAGTTTTTTATAAGTTTTAGATAATTTAATCA
GATTAACAGTAACATTAGATGTATTTAAAT	TACATTAACATGCAGAGCAGTTGAGGAGGGTGAGGCT
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTTTGGAAGCACATTAGGAAAAGGTCTTACTGCAC
GATTAACAGTAACATTAGATGTATTTAAAT	GAAAGCGAAAAAGAAAGATTAGATGAGTTATCATC
GATTAACAGTAACATTAGATGTATTTAAAT	TTTTCATTTTCACATTTTAAGCCATACAGTAAACC
GATTAACAGTAACATTAGATGTATTTAAAT	ATACTGGATTTGAAGAAGTATCTTGGGGTAATAGTG
GATTAACAGTAACATTAGATGTATTTAAAT	AGTGAAGTTATTACTAGAGTTGCAGTTTACGATAGT
GATTAACAGTAACATTAGATGTATTTAAAT	GCATATGCCGATACAGAGCATAGGTTAAATGATAAA
GATTAACAGTAACATTAGATGTATTTAAAT	CTCCAAATTACACAAAAAATACTATATTAGAAAAA
GATTAACAGTAACATTAGATGTATTTAAAT	CAGGAGCTGTAATACCAGCTTTGATAGCATTAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GATATGAAATATCAATTCTAGATAAAAATAATGT
GATTAACAGTAACATTAGATGTATTTAAAT	TTTCCCCATTGGCGTGCACTATTCATTTTTCTTTCT
GATTAACAGTAACATTAGATGTATTTAAAT	ATAAAATACCCTTTAAGATAGGTCGGCTATCATC
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAACTCCAATATCTATATGTAGAAAGTTAGGTG
GATTAACAGTAACATTAGATGTATTTAAAT	AATAAAATTGCTATTTTACTTCTACTTACTACCC
GATTAACAGTAACATTAGATGTATTTAAAT	TAATACCAATCAAGATATGAATTTTTTTCTTGTAT
GATTAACAGTAACATTAGATGTATTTAAAT	GCATAAAAATCTATTTCGCTTTTTGTTTTTCCGA
GATTAACAGTAACATTAGATGTATTTAAAT	CAAGGAAGAAATATGGTTATGATAAACGGAGGACAA
GATTAACAGTAACATTAGATGTATTTAAAT	AAACCATACAGAACATTTTAAAATAATTTATACCAC
GATTAACAGTAACATTAGATGTATTTAAAT	TTAGCAAGGTAGAAAAATTCTCCACCCTGCTTACC
GATTAACAGTAACATTAGATGTATTTAAAT	GTTATTCCAGTTATAACCGTTGAGCTATCACTTC
GATTAACAGTAACATTAGATGTATTTAAAT	AAAGCACAATCTTTAGGAACAGATAAAGTCAATGAA
GATTAACAGTAACATTAGATGTATTTAAAT	TTTAGTTTAAATCATACAACTCCTTATAGTGGCA
GATTAACAGTAACATTAGATGTATTTAAAT	ATATAATTGGGTATCAAATATGGAACAAGAAGCAAAG
GATTAACAGTAACATTAGATGTATTTAAAT	CCTTAAAACCAAAGGTGAGGATTGGAAAATGATA
GATTAACAGTAACATTAGATGTATTTAAAT	CCATTTTAACACCAAAGTTTTAGTTAACTATACACCAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGGCTATATTACAGATAGATATACAAGCTTTACACC
GATTAACAGTAACATTAGATGTATTTAAAT	AATTTAACCTTGATACTGAAAAGTATGGAAGTGTAT
GATTAACAGTAACATTAGATGTATTTAAAT	AAAAGAAAATGATAAAAATATAAGTGGTTATATTAT
GATTAACAGTAACATTAGATGTATTTAAAT	GGAAATCCATGTCAATACGCTAGTTTTCAGACAGC
GATTAACAGTAACATTAGATGTATTTAAAT	AAATATCTAGTTGTTATATTTTTCATTTTAAGCATT
GATTAACAGTAACATTAGATGTATTTAAAT	GGGAATACTGCAAATAAAAAAGTAAGAACTTTACC
GATTAACAGTAACATTAGATGTATTTAAAT	AGACATGAACCTATTTTATCACCACGCTTTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	GGCAAAACTGAAACCTTAGGAAACTCTAAAACTTGA
GATTAACAGTAACATTAGATGTATTTAAAT	GAAAGTAATTGTGAAAAAGGAATTTTAAAGTTGTGT
GATTAACAGTAACATTAGATGTATTTAAAT	AGAAAACTTTACGCAAGAAGCTCTCGCTGAATCTTT
GATTAACAGTAACATTAGATGTATTTAAAT	AAATGATTGACTTAATAATACCTATTACAAGGTCG
GATTAACAGTAACATTAGATGTATTTAAAT	TAACATCTTCTTAGCATTCCTCTCCAATATTCATAAG
GATTAACAGTAACATTAGATGTATTTAAAT	GATATAACATTAGAACCAGATAGTGGAGAAGGAA
GATTAACAGTAACATTAGATGTATTTAAAT	GAAGAAGACAACAGAGAACTTTTATGTAAAGAG
GATTAACAGTAACATTAGATGTATTTAAAT	GACAAATATTCAGTTAATTTATATAAGTTTTTAA
GATTAACAGTAACATTAGATGTATTTAAATGATGATGATAATAATGATGATGATAAGCTATTTAAGATTAACAGTAACATTAGATGTATTTAAAT	AGAAGTGGACTAGAAGAAGTAGTAAATAAATTAA
GATTAACAGTAACATTAGATGTATTTAAAT	AATATCTGCATAAGGTGCAGCAGCTCTACACTCGTT
GATTAACAGTAACATTAGATGTATTTAAAT	GGTGGAAATTTTGAACAGCTTTCTTTTGAAACATTT
GATTAACAGTAACATTAGATGTATTTAAAT	TATAATCATCCTCTCTTATAGCTTATGAACGAATTT
GATTAACAGTAACATTAGATGTATTTAAAT	AACTGGGAATTAGCTCCATGTGCTGATACAACAAAA
GATTAACAGTAACATTAGATGTATTTAAAT	TGTTTAATTACTGCTGCTATCAAATTAGGATCAAC
GATTAACAGTAACATTAGATGTATTTAAAT	GCAAATTTATTCTCTAATGCATTAAAAGCACTTGGC
GATTAACAGTAACATTAGATGTATTTAAAT	TTAGAAAAAGATTTAGATAGTAGGATATGGGAAGA
GATTAACAGTAACATTAGATGTATTTAAAT	GAGGATGCACTGAAAGAGATAAGAAAAATATAAGAGC
GATTAACAGTAACATTAGATGTATTTAAAT	GTTGGAGAATCTGTTGTGCTAAATTTATTACTACT
GATTAACAGTAACATTAGATGTATTTAAAT	CTACATGTATTTTTTACACCTTCCCATGTTTCACC
GATTAACAGTAACATTAGATGTATTTAAAT	ATGTATCATATCCACTTTCACCTAAATCAAATCTTG
GATTAACAGTAACATTAGATGTATTTAAAT	TAACTATAAGCTCTTAACACACAACCGCCTTTAA
GATTAACAGTAACATTAGATGTATTTAAAT	TGATATCTTTCTTCTTCCGGAGCCTGAACTCCTCC
GATTAACAGTAACATTAGATGTATTTAAAT	ATCCACCCTTGATAGAACTTAGTTTCCTTCTGAG
GATTAACAGTAACATTAGATGTATTTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013238.1\|WP_003413402.1\|671438_672227_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_CP013238.1\|WP_003413656.1\|676481_676772_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP013238.1\|WP_003413424.1\|666181_667000_+\|EcsC-family-protein	unknown	unknown	gnl\|CDD\|378945
NZ_CP013238.1\|WP_003413689.1\|690012_690252_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_071981880.1\|668722_670483_+\|type-I-B-CRISPR-associated-protein-Cas8b/Csh1	cas8b1	mkCas0106_cas8b1_CAS-I-B	gnl\|CDD\|188234
NZ_CP013238.1\|WP_003413547.1\|675466_676465_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NZ_CP013238.1\|WP_003413187.1\|668015_668708_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP013238.1\|WP_003413106.1\|683663_684047_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_071981883.1\|684052_684685_+\|normocyte-binding-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_033128040.1\|687983_688835_+\|DUF3737-family-protein	unknown	unknown	gnl\|CDD\|378875
NZ_CP013238.1\|WP_002581249.1\|665702_666092_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_043853731.1\|691759_692953_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
NZ_CP013238.1\|WP_071981884.1\|685013_687455_+\|glutathionylspermidine-synthase-family-protein	unknown	unknown	gnl\|CDD\|367631
NZ_CP013238.1\|WP_071981882.1\|672277_674893_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP013238.1\|WP_003413591.1\|674954_675449_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP013238.1\|WP_003432768.1\|690335_691517_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|224090
NZ_CP013238.1\|WP_003432776.1\|684677_684998_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_071981881.1\|670484_671435_+\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP013238.1\|WP_035764746.1\|687477_687687_+\|DUF350-domain-containing-protein	unknown	unknown	gnl\|CDD\|377187
NZ_CP013238.1\|WP_003432770.1\|688930_689806_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656

Protein	Function_ID	Function_description	E-value
NZ_CP013238.1\|WP_003413402.1\|671438_672227_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	5.47044e-52
NZ_CP013238.1\|WP_003413656.1\|676481_676772_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.98517e-24
NZ_CP013238.1\|WP_003413424.1\|666181_667000_+\|EcsC-family-protein	gnl\|CDD\|378945	pfam12787, EcsC, EcsC protein family. Proteins in this family are related to EcsC from B. subtilis. This protein is found in an operon with EcsA and EcsB which are components of an ABC transport system. The function of this protein is unknown.	6.74848e-59
NZ_CP013238.1\|WP_071981880.1\|668722_670483_+\|type-I-B-CRISPR-associated-protein-Cas8b/Csh1	gnl\|CDD\|188234	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI. This domain is found in the C-terminal 2/3 of a family of CRISPR associated proteins of the Hmari subtype. Except for the two sequences from halophilic archaea this domain contains a pair of CXXC motifs.	2.97856e-25
NZ_CP013238.1\|WP_003413547.1\|675466_676465_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.16783e-156
NZ_CP013238.1\|WP_003413187.1\|668015_668708_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	7.69087e-12
NZ_CP013238.1\|WP_033128040.1\|687983_688835_+\|DUF3737-family-protein	gnl\|CDD\|378875	pfam12541, DUF3737, Protein of unknown function (DUF3737). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.	2.91376e-167
NZ_CP013238.1\|WP_003432770.1\|688930_689806_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.37363e-40
NZ_CP013238.1\|WP_043853731.1\|691759_692953_+\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.74283e-70
NZ_CP013238.1\|WP_071981884.1\|685013_687455_+\|glutathionylspermidine-synthase-family-protein	gnl\|CDD\|367631	pfam03738, GSP_synth, Glutathionylspermidine synthase preATP-grasp. This region contains the Glutathionylspermidine synthase enzymatic activity EC:6.3.1.8. This is the C-terminal region in bi-enzymes. Glutathionylspermidine (GSP) synthetases of Trypanosomatidae and Escherichia coli couple hydrolysis of ATP (to ADP and Pi) with formation of an amide bond between spermidine and the glycine carboxylate of glutathione (gamma-Glu-Cys-Gly). In the pathogenic trypanosomatids, this reaction is the penultimate step in the biosynthesis of the antioxidant metabolite, trypanothione (N1,N8-bis-(glutathionyl)spermidine), and is a target for drug design. This region, the pre-ATP grasp region, probably carries the substrate-binding site.	9.70061e-24
NZ_CP013238.1\|WP_071981882.1\|672277_674893_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.58703e-31
NZ_CP013238.1\|WP_003413591.1\|674954_675449_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.87333e-52
NZ_CP013238.1\|WP_003432768.1\|690335_691517_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	1.12681e-164
NZ_CP013238.1\|WP_071981881.1\|670484_671435_+\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.48773e-52
NZ_CP013238.1\|WP_035764746.1\|687477_687687_+\|DUF350-domain-containing-protein	gnl\|CDD\|377187	pfam03994, DUF350, Domain of Unknown Function (DUF350). This domain occurs in a small set of of bacterial proteins. It has two transmembrane regions, and often occurs as tandem repeats. The are no conserved catalytic residues.	3.43173e-06

>NZ_CP013238.1|WP_003413656.1|676481_676772_+|CRISPR-associated-endonuclease-Cas2
MSKITNYNYAFVFYDVNEKRVNKVFKVCKKYLSHFQNSVFRGEMSPSKLVRFKTDLNKVVDKNEDFICIIKLMNDNVFGEEVIGISDRQNGEDLII
>NZ_CP013238.1|WP_003413547.1|675466_676465_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MGSTRYISSMGELTRKDNSLCFRKDGKNVYIPIENTKEIYCLNEISINTKLLDFLSQNHVVVHFFNYYEGYSGTFYPRNQYNSGKLIVKQVEKYSTERMVIAKAIVRGIGINIREVLYHYYKHNKTEVKGTIDWIKNAFFKRVGAANDVKELMSVEGEVWQRFYSEFKNFLPEDFIMNKRVKRPPDNPINALISFGNTLLYTKTISAIYRTHLDQRISFLHEPSEGRFSLSLDISEVFKPVIVYKTIFELVNNKKLQVNKHFDKKVNYCLLNEEGRNIFISAFEERMESVISHPKLKRKVSLRTAIKLDCYKLIKYIMEDQEFIPFSLKEGM
>NZ_CP013238.1|WP_003413591.1|674954_675449_+|CRISPR-associated-protein-Cas4
MRVNGTLINYYFHCKRQCYLHGNRLNLEDNSEIVKIGKAIHEDKAAKSNNAEIEIDNIKLDKLTSEYLTEIKKSDADVEAGKWQLLYYLKVLKSKGIIRKGKLECIEKNKSDKKVIYVDLDDESEKELDKYINEIENLIEDDKIPEVLNKSTCKKCAYYEYCYI
>NZ_CP013238.1|WP_071981882.1|672277_674893_+|CRISPR-associated-helicase/endonuclease-Cas3
MYFDDNMIVDIQKIIGCKHEFYAHLNKDSSKSSEEIRKETLKEHTDLCISYFKKIVSDKRMENTFLNFEDNYFKDMSQTGRKMFRRLLVNTIGFHDIGKINPNFQNTKMDNMLGKYAETFSGIGSEHSLLSSVLYIDYFIEEILSLSNEDGRLILMSIMMFNAYAISRHHSDLDNFNEFLSKFNEGEKAIEIINTFKENDMNNIYRKNFVLSENRIVKVCGYIKKKYFNEADDEKSIYLYTYERLIYSLLVCCDFYATSEFMNKTIISDFGEISNIDEFYKIYKDTDVYKSIREYEDTKYEKSKDLSYEKNINVLRTEMFLDAERELLKNIDENIYFLEAPTGSGKSNTAFNLSFKLFEEDKNLKKIYYVYPFNTLVEQNLNILNKTFGNNKAAMDKIAVINSIYPIKEDNKYVEYDSGKNGDEKDFSYKYYEKALLNRQFLNYPVILTTHVSLFNTMFGENKEDAFAFHQLANSVIVLDEIQSYKNTIWTEIISFLKGFAKILNIKVIIMSATLPDLNMLAVNTNSVCSLIKDREKYFSNPQFKDRVIVNYDLIDSGNPLQDLYEHVLKNSSRNKKILIEFIKKQSAYEFFKMLNEEELDATVLLMTGDDNSIERDRIIKELSSNESEENGVILVATQVIEAGVDIDMDIGYKDISKLDSDEQFMGRINRSCRKNGEVYFFNLDKTDKIYKDDFRVNKDFSLLDDKMREILKNKKFSEYYKMVLEMIKKSNNLLNDDNIHKFFKENVWMLNFKEVSQRMKLIEDNNWNMSVYLARNIDEDNIHLNGIEVWNEYKKLLHDSKMNYSEKQVKLSNIRSKMSYFIYEIKKNFDLPYNDKIGELYYIENGEKYFENGKLDKERFNNEVGMFIEL
>NZ_CP013238.1|WP_003413402.1|671438_672227_+|type-I-B-CRISPR-associated-protein-Cas5
MRILKFTLRGKSGFFKKPDVNSNLYFTYGNIHKVALTGLLGAVLGYGGYNSMNIKNIFNKKKKEAVQDFPEFYERLKDLKISIVPNGEKGFISKKVQIFNNSVGYASKEQGGNLIVKEQWLENPSWDIYIIIDDEESEKIEEAITKHKTVYTPYLGKNDHIADITNVQIINESQIAVNKEINKLDCLYLKDDFQINNVEDDFGDFSDDDIEDYFKYEEKLPYELEKNTNMYITKSFICTNMKIKKCSDIDVYRIKEKNIVFY
>NZ_CP013238.1|WP_071981881.1|670484_671435_+|type-I-CRISPR-associated-protein-Cas7
MDKRVYGVLGISSIMANWNADFTGYPKTTSDGTTFGSDKALKYPMKKMWDNQGEKVLYIKSMKLSEGKKGEVQLVPRALKERYEQIFYVKNLKECKDAKEVLTNLFNAIDVKNFGATFAEEGNNISITGAVQIGQGFNKYEDTNPEEQQILSPFRDGSKDNAKPDSEEAKNSTLGTKIVSNEAHYFYPFTINPAAYKEFNELGVTDGYTEEDYRKFKKASLVSATSFATNSKVGCENEFALFIETESDLYLPNLSEYIEFVKGDEKNTIKINCSELINSVISKIKNVEIYFNPYKTVLESDIKGAKVFNIFTQEEV
>NZ_CP013238.1|WP_071981880.1|668722_670483_+|type-I-B-CRISPR-associated-protein-Cas8b/Csh1
MLKECLEVFKSDLENNRQKIIDSYVPADGTYVIVSHKDDFFEIKDYFDIKYDKKEKKLLGKTNINFYDVCNYDYNSKLIDMNKPIDGKKIIHSNNYLSFFIKKESLENGKLNDEIIDNYYNILKNPIEKYAKNKKAVALYKSIEEEIGEVDAELLEKIKVWIKGNIFNLDMEIKGKDYLKIFFEHPIEKYVNEAKRYLIPNIYNNNDCNIDLDGDIYGLPNNNMGLNAKKPYLENKTRKNTSPYLIDAEEVQLQKEFFDYLMNEVSLGKVNAFIDVDNKKIDVKENGKLPDNDFNGLFLRLKKGKEVEIHDFDTITSYKSILKKELNVENILELDLDSKQNQKYMECYGSVKKKENVQKILDEVFFSSYLINNYFTDAGDISIKDNVLKNNLLTARNSIFNWIYKGIQNGSVNGIASVLDKVSLNLIKGSINNGYIPKAGHQFNLRWSLKEYFEGGRGMADIVHDLKLTLRDKINEKDTNKIDNDKEYYFAVGQLISYLLSKSKGKKRPHSLANQFINSKSNDDLKGKLKKIYVKYSYDPDINSKRFNNLYAMIVGYLPEGKVNTDLVIAGYLNSSLIYEKSEGDK
>NZ_CP013238.1|WP_003413187.1|668015_668708_+|CRISPR-associated-endoribonuclease-Cas6
MKVYEIKLKVFMLKKVTVDNIQTIVSEFIDSALAKNDQLLQMHNENKFKFYCFGGFYPLEDDKIYKSDKIYTLTLRTIDRRIAEFFNNDLINNYTSFIKGLTSEIRILPKKHIEKIYSLTPVILKNDNGYWKNVISLEDFEKRLKENLIKKYNNLSDEKLDEDFELYTGLEFKNRKPIANEYKGIKLLGDKVSLNISETKTAQDLAYMCLGTGLLEMNARGYGFCNYRWL
>NZ_CP013238.1|WP_003413424.1|666181_667000_+|EcsC-family-protein
MRKINIKKIKKEEKIIRRQKNKLAKIEEKLLEKEDNKFLKNKLNPLKSKVEDKIPDKVTNGLNKAFEKGFYYIFEKGTSLIEKSYNSDKLKSDADTNKYILSKEISSKNLKAIDKNVNMGNLLSKGITTVEGTALGFLGIGLPDIPIFIGVILRMIYEISLKYGFDYDDDKEKVFILNIICAGISDKEDRKKFFFDCDKISKAIDNNDEIYVDLDLMIKETSKKMVDSLLVSKFVQGIPLIGALGGAANYVVLTNISKMAKLKYKKRFINKL
>NZ_CP013238.1|WP_002581249.1|665702_666092_+|hypothetical-protein
MCSKFILKNKDRKVGILDLDNKTFILDKDYTGYLPWPLYTADKDRNYIPTPEDIYKFCAERVVQEDNQALPDILDKLNWSNLSVVELCKITHGMQYTDFLWFVPIEHDDDWKFDNKHIRGKYYTGKVNI
>NZ_CP013238.1|WP_003413106.1|683663_684047_+|hypothetical-protein
MEIFIYKTYEQWYKDKPYEVLEGSICQMENGLVAADTYIDNKNYRQVFSPTCNFAVVYKLEYGFFGVLKEINIYHNSESWRKSKPEISFSGEVCERECSDNYFVFINEDGYKQYLSLNGIYSVVYER
>NZ_CP013238.1|WP_071981883.1|684052_684685_+|normocyte-binding-protein
MYLKDIDLRELYRKWKKNLKQFRGFYRSTPFVTLQDYDDFKLKSCEQGKYDELAENILLQINEGTLCIVDLPFDAVIDIALVFNNKYRIKPVLNINMFFNEHGIIGTEDNISKLINNSLMLEDINTDKFIMLYDYDRYDDSIDVKKIYDKLNNQYGIGDDDFPHASFLKRFGYGKVSVFTKKRLKEDMKIQLDYLQKEIEVKIEEVEGFE
>NZ_CP013238.1|WP_003432776.1|684677_684998_+|hypothetical-protein
MSDMKEMLKKNRKKALSLAVAAVFTAGLSSNFAGCTTNQKNYNQEDDDDDDSGYGGSSGYHGNTFWHSSSSGSSNEKVNSSSGNKGKSGITSSSGYSGGKGGSASS
>NZ_CP013238.1|WP_071981884.1|685013_687455_+|glutathionylspermidine-synthase-family-protein
MKNRIRYTEDALFDNYMVSAYGEEYVHSQIPFYIEKDIYNRIVYYSETINNLALRVVENINGSHKKLLDYFEEFPLKERIFNLKCNLSPMYWTRYDTFIDKRKNIKFAEFNYDKPCGQKEIHLAGKLDFEENVNKNFVDDLIDELVAITKEYSGIDKVDVGFLMDPCHYEELHHSYYFKHILKDTNINIVQVGPQNLSVINGEVYAYSKIKLKIILRLFPTEFFHEINNIEDILDSFDKGKVLIINDPRIIAVQCKGFFSYLWDLIRNDSSLISDEEKEVIRRSVPYTEIFNEEIIQKVIKDKNRIVLKSSLGRYSQEVYLGKTYTDEEWNNLIGNVADNHKIHIVQELIDIRQDYTYVPDLYNTNIPVAAYGNFGTYIMKDKVTGLLVRWGKTLLTNDYETWMNPIGISEFPIKIETLDIGNKNEAEVYEKLCEYMAFNYKFTGEYTNENKAVSSDILLMSSSLYREIKYAGEKFCSIVENLYIKIRDNLNILGELFGIPEELYKIIENDTVSSLCALGRIDFCIDNEGRLKMLEFNSETPAGIVESIGINKFIQDEFLINYRNPNEHLREKISLQLRDIIGQIEKKKYVKNIAVVTCWYDEDIYNTNIIGDIMKEFKEYNIVFGNVYDLKVNENEIYLYNIQIDAVYRYYPLDWLYYDEEMNYLLEPLRNGDYLINPGHTLVMQSKVLFAFMYEVIGKGILSEDDENFINQYIPYTSMEKDKKLSKDYVIKPYFGREGQDIRMNYEEHDENLNEEIIFQDRVNIRPLRMDSFKFPIIGAYITGSELAGIYTRMGDIVTDKNAVYISTYIQD
>NZ_CP013238.1|WP_035764746.1|687477_687687_+|DUF350-domain-containing-protein
MNNFTFDIMLSIVFGIIGIILLITGYVVFDKVLKKIDFDEELRNKNTAVAIVIAGFMIAIGIIISGVVA
>NZ_CP013238.1|WP_033128040.1|687983_688835_+|DUF3737-family-protein
MEKYIEQKFVGERALFQSNNIELSYCTFADGESPLKESKNININNTGFKWKYPLWYCENVKVKDSTMFDMARAGIWYTNNISMKNVTYDAPKGFRRCNNVELDNVIIPNALETLWNCTYVKMNNVTAKGDYFAMGSCDMEIENLTLIGNYSFDGGRNIVIRNANMLSKDAFWNSENVTVYDSYISGQYFGWNSKNVTLVNCTIESEQGMCYMENIKMVNCKLINTDLAFEYSNVDAIIDSSIDSIKNPYSGQIVADSIGEIIFDNEDMKKENTKIVLKKYGIN
>NZ_CP013238.1|WP_003432770.1|688930_689806_-|LysR-family-transcriptional-regulator
MDIRVLRYFLTIAREESISGAADFLHITQPTLSRQIKDLEDELGTQLLIRGSRNITLTESGLLLRSRAEEIISLVDKTEAEMNISNEIISGDIYIGSGETEAIRSIAKIAKDLQKIHPNIKYNLFSGNADDVKDRLDKGLLDFGIIIEPADIKKYDFLRLPTTDTWGVLMRKDHPLSEKEYIEPKDLWNLPLICSAQSTIFDNLAGWIGKNMDELNIVATYNLLYNASLMVDEGLGCALCLDRLINTSGESNLCFKPLYPELNVHLDIIWKKYNVFSRASEIFLEKIREQL
>NZ_CP013238.1|WP_003413689.1|690012_690252_+|hypothetical-protein
MSKEQNKDNSLIQNLEDAGCSCEEIRDYLKYDKEGLDGNKICLLIKQRKYLLDCIHETQKQLDCLDYLLYKVKGCKCKK
>NZ_CP013238.1|WP_003432768.1|690335_691517_+|pyridoxal-phosphate-dependent-aminotransferase
MKYDFNVVRDRNNTNSLKWDISENELPMWVADMDFQTAPAIIEALENKVKEGIFGYSVISEKWNESIVNWWSRRHNFTMKKEWLIFCSGIVPAVTCAVKRITNIGDNVLVQTPVYNIFFNSIENHGRHVLESKLKYDGGQYKIDFEDLEQKLAHPLTTMMILCNPHNPAGRIWSVKELRKIGELCKKHHVVILSDEIHCDLTALGKEYVPFASVSEECEQNSITCLSATKTFNIAGLQTAIVSIPNEEIRNKMKRGLNSDEVAEPNTFAIDAVVAAFSYGEEWLDELREYIEENKKIVSNYLQKELPQIKMVCSDATYLLWLDCTDIIGDTAQLCSFIRKETGLYLSSGSQYRGNGNRFMRMNIACPKSILDDGLLRLNQGVRAYEQWVVKQC
>NZ_CP013238.1|WP_043853731.1|691759_692953_+|MFS-transporter
MNRKENSKGILLILTLGVFSIINTEMGVVGILPLLSQYFGVTISKAGLFVSMFALAVAVSGPIMPLIFSGINRKKVMIMVLSIFVVSSLVQALTTNFYVAIIARIIPALFHPVYVSLAFSVAGKTVSEKEAPKAAAKVMMGVSAGMVLGVPIVSFIANTISLQSAMIFFAVVNGIVLIATCIFVPSISVTERMSYGDQLKVLKLPELWLAIMAIIFLNGSIFGVYSYFADYMTGVTGFSESSVSILLFVYGLANIVGNMIAGKGLSEKPLRLVRIFPVLLAVAYICLFILGEFKLSTAIITLLWGILAGIAGNINQYWITSVIPKAPDFGNGLFLAATNLGTTIGTTVCGAFIANLGSNYMLVGGMCLLIISMIFILIRTKSIEKVKKVNAIQLIRE

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Crispr_ID: NZ_CP013238_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013238_4

755147-755527

Orphan

Consensus_repeat	Method
ATGAAAACAGGTTGGGTAAAA	CRT

6 spacers

The CRISPR arrays of NZ_CP013238_4

>merge|NZ_CP013238|4|755147-755527|CRT
ATGCAAACAGGCTGGGTAAAAGACAAAGATTCATGGTATTATCTAAGTGAAAGTGGATCAATGAAAACAGGTTGGGTAAAACACGGAAATGACTGGTATTATCTTTCAGAAGCTGGAGATATGAAAACAGGTTGGATAAAAGACAAAGATTCATGGTATTATCTAAGTGAAAGTGGATCAATGAAAACAGGTTGGGTAAAACACGGAAATGACTGGTATTATCTTTCAGAAGCTGGAGATATGAAAACAGGTTGGATAAAAGACAAAGATTCATGGTATTATCTAAGTGAAAGTGGATCAATGAAAACAGGTTGGGTAAAACACGGAAATGACTGGTATTATCTTTCAGAAGCTGGAGATATGAAAACAGGTTGGGTAAAA

>NZ_CP013238|4|2|755147-755527|CRT
ATGCAAACAGGCTGGGTAAAA	GACAAAGATTCATGGTATTATCTAAGTGAAAGTGGATCA
ATGAAAACAGGTTGGGTAAAA	CACGGAAATGACTGGTATTATCTTTCAGAAGCTGGAGAT
ATGAAAACAGGTTGGATAAAA	GACAAAGATTCATGGTATTATCTAAGTGAAAGTGGATCA
ATGAAAACAGGTTGGGTAAAA	CACGGAAATGACTGGTATTATCTTTCAGAAGCTGGAGAT
ATGAAAACAGGTTGGATAAAA	GACAAAGATTCATGGTATTATCTAAGTGAAAGTGGATCA
ATGAAAACAGGTTGGGTAAAA	CACGGAAATGACTGGTATTATCTTTCAGAAGCTGGAGAT
ATGAAAACAGGTTGGGTAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013238.1\|WP_002581325.1\|763299_763611_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376749
NZ_CP013238.1\|WP_071981916.1\|749191_750055_+\|molybdopterin-dehydrogenase	unknown	unknown	gnl\|CDD\|224238
NZ_CP013238.1\|WP_071981917.1\|750171_752964_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|132354
NZ_CP013238.1\|WP_081366061.1\|755626_758827_+\|family-16-glycosylhydrolase	unknown	unknown	gnl\|CDD\|185693
NZ_CP013238.1\|WP_003413150.1\|753141_753363_-\|DUF4318-domain-containing-protein	unknown	unknown	unknown
NZ_CP013238.1\|WP_071981918.1\|760096_761536_+\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NZ_CP013238.1\|WP_081366058.1\|744139_745450_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|235963
NZ_CP013238.1\|WP_071981921.1\|764966_766013_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224043
NZ_CP013238.1\|WP_071981914.1\|746599_748729_+\|xanthine-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|376913
NZ_CP013238.1\|WP_003413398.1\|753804_754830_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP013238.1\|WP_002581328.1\|766012_766696_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226629
NZ_CP013238.1\|WP_071981919.1\|761928_763269_+\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP013238.1\|WP_071981922.1\|766729_767548_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270255
NZ_CP013238.1\|WP_071981913.1\|745475_746564_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|223245
NZ_CP013238.1\|WP_071981911.1\|742046_742646_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133025
NZ_CP013238.1\|WP_003413329.1\|761595_761898_+\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|224357
NZ_CP013238.1\|WP_071981912.1\|742848_744174_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238639
NZ_CP013238.1\|WP_071981920.1\|763762_764812_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP013238.1\|WP_003413515.1\|759144_760044_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP013238.1\|WP_071981915.1\|748721_749198_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991

Protein	Function_ID	Function_description	E-value
NZ_CP013238.1\|WP_071981916.1\|749191_750055_+\|molybdopterin-dehydrogenase	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	6.95227e-53
NZ_CP013238.1\|WP_071981917.1\|750171_752964_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|132354	TIGR03311, Se_dep_XDH, selenium-dependent xanthine dehydrogenase. Members of this protein resemble conventional xanthine dehydrogenase enzymes, which depend on molybdenum cofactor - molybdopterin bound to molybdate with two sulfur atoms as ligands. But all members of this family occur in species that contain markers for the biosynthesis of enzymes with a selenium-containing form of molybdenum cofactor. The member of this family from Enterococcus faecalis has been shown to act as a xanthine dehydrogenenase, and its activity if dependent on SelD (selenophosphate synthase), selenium, and molybdenum. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NZ_CP013238.1\|WP_081366061.1\|755626_758827_+\|family-16-glycosylhydrolase	gnl\|CDD\|185693	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.	1.90288e-103
NZ_CP013238.1\|WP_002581325.1\|763299_763611_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	gnl\|CDD\|376749	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIA PTS system enzymes. This family of proteins normally function as a homotrimer, stabilized by a centrally located metal ion. Separation into subunits is thought to occur after phosphorylation.	2.28676e-34
NZ_CP013238.1\|WP_071981918.1\|760096_761536_+\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	0
NZ_CP013238.1\|WP_081366058.1\|744139_745450_+\|amidohydrolase-family-protein	gnl\|CDD\|235963	PRK07203, PRK07203, putative aminohydrolase SsnA.	2.89476e-122
NZ_CP013238.1\|WP_071981921.1\|764966_766013_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224043	COG1118, CysA, ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism].	2.83496e-92
NZ_CP013238.1\|WP_071981914.1\|746599_748729_+\|xanthine-dehydrogenase-family-protein	gnl\|CDD\|376913	pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding domain of aldehyde dehydrogenase.	6.22547e-164
NZ_CP013238.1\|WP_003413398.1\|753804_754830_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	7.66734e-107
NZ_CP013238.1\|WP_002581328.1\|766012_766696_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|226629	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism].	6.63473e-86
NZ_CP013238.1\|WP_071981919.1\|761928_763269_+\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	1.88489e-129
NZ_CP013238.1\|WP_071981922.1\|766729_767548_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270255	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. ModA proteins serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate and tungstate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.74744e-104
NZ_CP013238.1\|WP_071981913.1\|745475_746564_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|223245	COG0167, PyrD, Dihydroorotate dehydrogenase [Nucleotide transport and metabolism].	2.69018e-58
NZ_CP013238.1\|WP_071981911.1\|742046_742646_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.10425e-36
NZ_CP013238.1\|WP_003413329.1\|761595_761898_+\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|224357	COG1440, CelA, Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism].	1.15238e-43
NZ_CP013238.1\|WP_071981912.1\|742848_744174_+\|amidohydrolase-family-protein	gnl\|CDD\|238639	cd01314, D-HYD, D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.	4.36978e-81
NZ_CP013238.1\|WP_071981920.1\|763762_764812_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	3.429e-103
NZ_CP013238.1\|WP_003413515.1\|759144_760044_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	7.97391e-39
NZ_CP013238.1\|WP_071981915.1\|748721_749198_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	9.19179e-63

>NZ_CP013238.1|WP_003413398.1|753804_754830_+|LacI-family-transcriptional-regulator
MIKISTIYEIAKIAGVSPATVSKVINNYSDISDKTRKKVKKILEEQNFQPNYEAQCLSTKRTWTLGLVYFENSEIGLKHPFFAAVIESFKKEAEKKGYSLLLGSKNDRLKIDSFLQYFQYRSVDGIAIICSIPNDKETSEIIESDFPTVVIDMYNENTATVTSDNKQGCKMAIQYLYDLGHRKIAHITGMEENDNWVSNIRQESYIHEMNRLKLPIRNGYIQKGRNFDFDGGYVAMKNLMKLEERPTAVFAAGDKCALGAIQAVKDEGFNVPDDISIIGFDDSDVSQYVTPKLTTVKQSCDMIGSQAATILIHQIDKKEKVVVNKIIPVELIVRESCKRIK
>NZ_CP013238.1|WP_003413150.1|753141_753363_-|DUF4318-domain-containing-protein
MGKFFRKAFDIELEDSLTYPSTKTICETILKKESDIQFINTDIPVSFKQRNTTFEVKVEMARGGYILICKEVK
>NZ_CP013238.1|WP_071981917.1|750171_752964_+|molybdopterin-dependent-oxidoreductase
MGKVITLTVNKIAMKKELTEDIFLLRYLRDELGLMGTKNGCEKGHCGACTVIINGDAKRSCIIKLSRLDGAIIETIEGLSHGEKLHYIQQAYLDEGAVQCGFCTPGMIMSTKALLDKVHNPDDEQIKEALKDNVCRCTGYAGIIRAVKRAAKYKKHYEDDGCSIKNYNYVGVGVPRIDGIKKVTGAPIYADDYTAEGMVYGKLVFSKYAHGLVKKINTSKAEALEGVVLVLTGNDVPGINAFGVFTKEQPVLIKENEEVKYLGAAVAAVFAENEKIAIKATKLIEVEYEVLPALLDPLEAFKKGSQLVNKNKENNIVHEVHAKKGNVEEGFKKADVIVEGHYYTPAVEHAYLETESCLALPTDEGGVEVYTGSQGSISFQDNIAVNLNMPMEKVRVIYTPCGGGFGGKEETTVQIHACLAAVILKRPVKMTLSREESIRISTKRHPMHIWMKHGATKDGKIVAVKSKVIGDSGAYESATKPVIFRSAVTASGPYVVENFQADSYGVATHNNPKGAFRGFGSTQPSFACEIQIDKLARKLNMDPAELRRINGIDDGKKTGTGQKLTGGTGYLKTLEAVSDGLKRIRNNFKPSGSKKKIGFGIASSYKNVGIGTGILDNAKAAIELMEDGRIQVRIGAADMGQGCDTICAQIAATVLKVPYECIEIVANDTKICPDGGMTTASRQTYVTGNAVKITSESVKPKLSFYLKMAAESEEMKFHKNHINDKGEIIITKSLLKKAYDLCKDNNDSILDEKDYIPPKTYPHKICGDLIPGMKEEEFKIHYAYCFVSAGAVVEVDTETGEVKVLKVLAAQDVGKAINPKNVTGQIEGSVLMGMGMALSEEFIETDEKVITDNLFKIGIPKIKSMPEIETFTIEVNEPEGPFGAKGMGEVGLNPVVSAISNAVYDAVGVRIQELPMKKDKVLKAIKSKET
>NZ_CP013238.1|WP_071981916.1|749191_750055_+|molybdopterin-dehydrogenase
MVGNVDGYIPKTINAALQILNSENVIVYAGGTDLMVRYKNETSLLPKFDKNILYIGQIDELKKVYENSEEIVIGAGCTLASLLRNEHVPEILKKSIRGAASPAIRNMGTIGGNICNASPAGDTLPVLYSLNSRCNVISEGLERTINIEDFIYGPRRTALKKNEILKSITISKENFNIVHYEKVGARKASAISKLSFAGLCNVENGRVQDLRMSFGAVGATVIRLKEAETIIIGKEINTLDKFIKEAIEIYDKNINPIDDQRSTAQYRKMVVMNLIKYFFNTEIKGKN
>NZ_CP013238.1|WP_071981915.1|748721_749198_+|(2Fe-2S)-binding-protein
MNKSITFLINNKVVRANKNTSKRLLDFLRDDLNITGPKEGCGEGECGACAVIIDKKLVNSCLVSLGSVEGKSIITIEGLKGTKQYKILEECFAEAGAVQCGFCTPGMIMAAHALLSLIPHPTEEDVRKGVSGNLCRCTGYNMIIKAILMAAERGDSLW
>NZ_CP013238.1|WP_071981914.1|746599_748729_+|xanthine-dehydrogenase-family-protein
MESCINDISRSVTKSDHEIKVSGSAKYIADMKFKNCLHAKTLRSLKAKAKIKKINMPSMKDGYFVIEGKDVPGLNKVKIIQNDMPVFADEEVNYIGEPILLVAGPDLDEVVRLVNEIKVEYEEEEPVLDLKVSNHIFAEYGYGRGDVNKAFKEAHVIIEEEFTTGYQEQAYLETQGVVGVYEENKVSVYGTMQCPYYVKNAVIQALGCKDDEVRIVQTTTGGGFGGKEDYPSIIGSQIAVACMKTKSPVRLILNRIEDMSSTTKRHPAFLKYKTALDKENNIIGIDIDIILNGGAYSSLSSVVLQRSLICATGVYNIPNLKVHGKVVKTNTVPNGAFRGFGGPQSIFAIETHMNHIAKKIKVNPLEFKKKHFVKRGDDTATGGNFFYDVKLEEMVNKVENMCDFSKKYIKNEINNKNNKEIIKKGIGMSIFLHGCGFTGSGERDFIKAVVKLLKHKDDKVEILVANTDMGQGLQTTLRKIVAQVLGINYDEITYNNPDTDRVPDSGPTAASRSVMVVGKLLERAAKKLKVQWIDKKEQIIIESYKHPDLIPWDEKNFCGDAYPSYSWGVNVVEVEVNTLTGVTDVKGIYSAFDVGKEIDKTIMEGQVQGGVIQGLGYGSCEKMECSDGVLKQHSITDYIIPTSKDVVNIKNVFIDNPCELGPFGAKGAGELTLVGTAPAYVDAVENAVEVKINKIPATPEYIMEAITNE
>NZ_CP013238.1|WP_071981913.1|745475_746564_+|4Fe-4S-dicluster-domain-containing-protein
MNLSTTIGKIKLENPLMPASGPLVGDKDKMSALNEFGVGAMVTKTISSEKAEVVRPCIYGGKNFIMNAELWSEYAPEVWIDEFLPSIKKELKHKPLIISVGYTKEDMEFLIPKLDVFADAFEISTHYVGKDLSNIKETLKTIRRFTQKPVFMKMSPHIPDPIGFAKMVIENKGSGIVAINSLGPTMNIDIDKRSVLIGNKEGEVWTSGPAIKPMALALIHKIKKAVPECEIIGVGGISSADDIIEFLLAGASAVQMLSAAMLKGKDLYEKLIEELPKALKKHGFNSVEEVINEKLSIGQVKYEPEYPLINKDKCNNCRLCEKACPYFAITSIDNQIKIDTKNCFGCGLCESRCPSKAIYNVF
>NZ_CP013238.1|WP_081366058.1|744139_745450_+|amidohydrolase-family-protein
MIKALINVDIFDYETLKKNSYIIFNDKILETGSMEDFKYHNANKFDEIINLNGQTLMPGLINCHSHIYSTFVRGWVTKCNPKSFVELLEGMWWKLDRALGEEEIYYSGLISSMEFLKNGVTTVIDHHASGKMIKGSLDVLKKSVCDEGGIRGVFCFETSDRFDLNQCIEENIDFNKKCKDSNARGIFGMHACLTLDNDSLRKIKDRIKKMPIHIHVGESDEDNINSMKKYNKTPVERLNEYDLLNENSILSHCIYINDKDKDILENKKIYVALNPTSNLNNAVGLADVINFQKRKIKCVLGNDGLGFNFSREIVNLLYGMHLKYKSTTVFNLNNLKEILEANYEYAGKILGCRLGKIEKGYEADFITVDYKSFTPVNEENIFGHYVYGIMDNFKPSNVWCKGVIKIKNYKTVQNVEKIYEEAESVAQRLWDHIKES
>NZ_CP013238.1|WP_071981912.1|742848_744174_+|amidohydrolase-family-protein
MDLGIINGYVYLEGRFIKSNLYIKNGVIESVTSSIMHCSKVYDAKSCMVMPGFIDPHVHFNLGVGKNVSAQDFHTGSINAALGGITTYIDFLDPINNISELDFEFNKRKKQAEDSVIDYGFHVTLGSFKEGVKELFKKGRALGMPTIKIFTTYESTGRMTKDNIIDELLKYSKEYECRVVVHAENNDLIKEKNILVKDHEKARPAIAEISEVLKLCEMAAYRNGLLYIVHTNCGTTVERVRENFKDSLHSSIILESAPHYFKFNSSVYEGEDGYRYTMTPPLREESERLKLKDNIDGIDIIGTDHCPFSEHMKNKKYTSDIAMGIDGVKYSFLNMYTLYKEKIIPKFTENPAIIHGLYPKKGSLMVGSDGDIVVFDPNKTTIVNDKESIYDGQVLKGSIKAVFAKGNMIVNNNEFFKNSSSGSYIERRIQLDKSFNKCRYI
>NZ_CP013238.1|WP_071981911.1|742046_742646_+|NTP-transferase-domain-containing-protein
MSVDAVILAGGYSTRADGFKMEFDIEGKTILQRCIEGFYDSCRKIIVVTGFKYEKIEKLVKDYEKVVTVYNDNYPKGMFTSIKKGISQVESEKFFLTPGDYPLINKKVIEEILTKSIKVKNENKEVIILYFYGKGGHPILADSSIVQDILVKSDDYNLREFLKNRKVAYEIIEDKSIILDVDTAQDYNEALSEFNKKLI
>NZ_CP013238.1|WP_081366061.1|755626_758827_+|family-16-glycosylhydrolase
MHIGKITIDGKEYEFGTSGEAIGEKPVVKNDKIFGATINAGSQNNNQNKDENKDSQTSNSNKHHSSNSGSTIQNKKWNLVWQDDFNGDTLNTNDWNYEKHAPGWVNSELQEYTDSTDNISVKDGNLVIKAIKTEKDGKDYYTSGKITTQDKKTFKYGKFEIRAKTPKGKGLWPALWMMPNDESLYGQWPKCGEIDIMEVLGHEPEKAYGTIHYGEPHAEQQGTYTLENGTFADDYHTYSVEWEPGEIRFYIDGNLYHKVNDWFTKVEGGDEVTYPAPFDQPFYIQCNLAVGGSWPGNPDENTDFNNAELKVDYVKVYQKDSYDENVKKPEKNVVFREPDKTGNYVVNGDFSKQDDKNWEFKTALNGVGNTEIADNKILIKTENEGTADYSIQLVQPGVPLKEGGKYKVSFDAKADDERTMIVDISGPDKSYVRYFDDTKLNLTFNKENYSYEFTMNKEDDANARLEFNLGNQNSKANVEISNVRIEKIGQVIKDDDGSKKVMPDGNYVNNGTFDVGEDRMKYWEIESSLKKDASVSVTNNNNVRQLKINVKKSPSSLEDLKIKQSKLALKDNKQYVLYFDAYANEDKTIKAMINGKAFDANLSKGKKTFKFEFNTENVEDSRDLEFLLGAKGTTYIDNIRIEENALIRNGDFSGGFTGWQIFADGGLSSKPTYGVDSLKEDNAAQINIVDTGDADWKIQLKQNNVKLEKGKKYELSFDAKSTVDRKIMYAIQRDGSSDNNWDAYTGSNIINLTSDSKNYKLGFEMKKDTDSDAIFSISMGAVGGTQIIDKHTVTIDNVQLKEVDSIDNDENNSNDDTNDNTSGSSIVNNGDFGKGFEEWSQYVDESIKNGATFNSDNNQANINITNSGDQDYKVQLKQENIKLEKGKKYKVSLDAKSTLARDIKFTVQKNGGDWKPYCEVKKISLNGELQNYSIEFTMNDESDDKAALTISMGEGNIIENHTITIDNVKIEEVTLDSQQIQNQTEDIENFDELVSNDKTNVVSNELTSNEQLNTVNENIISYGNELKTEASVDNNSFNKVDQSFKEEDLLNNNTILNSSENKSKNN
>NZ_CP013238.1|WP_003413515.1|759144_760044_+|ROK-family-protein
MERYNLGIDIGGTFIKFALVDKQYNIKDKWKVESLKFDSKDEFYDYLCSNVKYNDEIDVIGVSAPGLIDEQSNVKSYAAPNVSIMYGTNINDEISKRTNKKVASINDAKSAGLCEFTIGNAKGSKSSGFLILGTGTGGCLCDKNGVIYGKDAFAGEFHNIPFINFQTKEINKMGDGASITGLIEIYNGKVENDIKTKYGTKICERYLDGDEIAISAVEEWIDNIVIQLITITVFYNPEIICIGGGISEEKWFIEKLREKYQSTCIDYLQANFITTKIEKCKYNNDANILGAIINSEIKK
>NZ_CP013238.1|WP_071981918.1|760096_761536_+|glycoside-hydrolase-family-1-protein
MIYEKLEKFKDGFLWGSASAAYQVEGAWDKDGKGKSIWDVYTKIPGTTFKGTNGDVAVDHYNRYKEDVALMAEMGLKAYRFSIAWSRIYPNGKGEINEAGIKFYEDLIDELIKNNIEPVITLYHWDLPQHLQDLYGGWESREIINDFNEYCITLFKKFGDKVKYWVSLNEQNVFVTLGYLTALHPPGVKDHKRMLNVNHIANLANAKVIESFRTYVKDGMIGPSFAYGPVYPYSCNPDDVLSAENAEDLNSNWWLDVYCKGVYPAFAMKYYERLGIAPVIEEGDLELLAKAKPDFIGINYYQTATVAMNPLDGVGAAEGINNTGKKGTTKESGTPGVYKNVKNPHVETTNWDWAIDPTGLRVGLRRLTSRYNLPILITENGLGEFDKLEENDVVNDEYRIKFLKNHVNACKEAITDGVDLIGYCTWSFTDLLSWLNGYQKRYGFVYIDRDENDEKDLRRIKKKSFYWYKNVIGSNGEEI
>NZ_CP013238.1|WP_003413329.1|761595_761898_+|PTS-sugar-transporter-subunit-IIB
MKKILLVCSAGMSTSLLVTKMQSAAKEKGIEIEISALPVAECSSVIDTVDIVLLGPQVRFQKPQVEKLVNGRIPVDVIDMRLYGTMNGKAILEDTLNKIK
>NZ_CP013238.1|WP_071981919.1|761928_763269_+|PTS-sugar-transporter-subunit-IIC
MSIMDKFQGAIEKLLVPIAAKINAQRHICAVRDAFILSFPLTMAGSLMVLLNNVFLSPDGFVIKMLKLDKVFPNIGQYQAIFSPVLKGSADIFAILVVFLIARNLAKSLKGDDLLTGLTAISVYFIVYPDYLSVEGTNYITTRFTGAQGLFVAIIVGLLVGELMSVLSKSSKLEIKMPEQVPPAVARTFKVLLPIIITTISFSILNFIVKKFAPGGLHELIYNVIQTPLTALSQSVGSVLVLSFLSQALWVMGIHGPNTIAAIRDTMFSEAGNANLLHVSATGTAWGAPYPVTYSGLASAFTEYGGSGCTLGLIIAILIFSKTKDQKSIAKLSLAPGLFNINEMVIFGLPIVLNPIYIIPFVLTPIVNIMIGYTSICILKIIPPVAYGIPWTTPGPLMPFLGTGGNILALVIGFICLGVSILIYSPFVIAANKAAQKEIEKEIEVA
>NZ_CP013238.1|WP_002581325.1|763299_763611_+|PTS-lactose/cellobiose-transporter-subunit-IIA
MEGMELIAFEIISNVGMAKSLSVEALRAVRLGNYDECNKKLEEASEYLIKGHHAHTSLIQKEASGEKIEFSLIIMHAEDQMIAAETIKSLVEEMIDMYKELKK
>NZ_CP013238.1|WP_071981920.1|763762_764812_+|LacI-family-transcriptional-regulator
MNSSDIAKIAGVSRSTVSRVINNYPNVPEETREKVLRIIEEYDYVPHASARMLAGSKNRVIGLFIVDMVERTYGLKNRITKSPYYLEFTSSVIENASEMGYTVLVHIIHNADGYEKIKECFYNKTISGGIFIGQNDNDGVIKKLINGGYKVVLIDQTIKTDDNIYNKCMIVNVDNYRGAYNATKYLIDMNHTEIAHITGGTGKFSSNDRIKGYKRALKDANIPIKRNLIIHSEFIEEGGYNSTKKLLSKNNKFTAIFASNDKIAFGAIKALKEEGIRVPEDVSVIGFDDIEAAQYFNPPLTTMKMELSEMAEIATKSIITSLENDVQFSANYVIPVNMIKRESCKKVDL
>NZ_CP013238.1|WP_071981921.1|764966_766013_-|ATP-binding-cassette-domain-containing-protein
MSLYVDIEKQFSSFKLKVNFESKNEVLGLLGESGSGKSITLKCISGLITPDKGQIILNDKVFFDSEKKINLSPQLRNTGYLFQNYALFPTMKIKDNIKIGIEDMQKEKQNLFMKEYIKKFGLSGLEDRYPWQLSGGQMQRVALARALITSPNILLLDEPFSALDMHLRNNMEKELLSIIKDFNKNVVFVTHDISEAYRVCDEIIVYENGNSLKKRNKYELFTHPKTLSEAKLTGCKNISKASKISDNSIMAEDFGYKFIFSEKVPDDIHYLCIRSHNINISQNINSRNTHPYTITNIIENPFDYTLYIRKDLNSNNKPIEFTMSKDNFNYKIGDFLYVNFMEDKLFYF
>NZ_CP013238.1|WP_002581328.1|766012_766696_-|molybdate-ABC-transporter-permease-subunit
MTNDFSPLWISIKTALLSTLITFFIGIAVSYFMANYRGKLKGVIDGILTLPLILPPTVVGFFLLLICGKNGPIGKLMILFDKSIIFSWSATVIAAIVVSFPMMYRSGRSAFEQIDTNLIFAARTLGLSEFKIFYKIALPLAWPGIIGGLVLSFARAMGEFGATLMLAGNIPGRTQTMPLAIFFAVEGGDMQKALLWVLIITMLSLILILALNYWSEAQLKIIGRRIK
>NZ_CP013238.1|WP_071981922.1|766729_767548_-|molybdate-ABC-transporter-substrate-binding-protein
MKRIKTILSTLVICTLALSLIGCMNSKNNAENPASETNQTNDKSNVELTISAAASLKEAMADIETEYNSSNPEVKLTFNFGSSGSLQKQIEQGAPCDLFISAGQSQMKSLDEENLLLEGTNKNLVKNSLVLIGPKDTSLSSVNDLTSNDVKHIAMGEPTSVPAGKYADEALTNMNLKDSVSEKLTFAKDVKEVLAWTVSGNAEAGFVYKSDALSSNDAKIIETVPEDKHSPITYPVAVLKESKNPDASKEFEDFLFSDKCKSIFEKYGYEIA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013238_1	1.1\|493764\|31\|NZ_CP013238\|CRISPRCasFinder	493764-493794	31	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	493764-493794	0	1.0
NZ_CP013238_2	2.1\|493938\|51\|NZ_CP013238\|CRISPRCasFinder	493938-493988	51	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	379362-379412	0	1.0
NZ_CP013238_2	2.1\|493938\|51\|NZ_CP013238\|CRISPRCasFinder	493938-493988	51	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	493938-493988	0	1.0
NZ_CP013238_2	2.1\|493938\|51\|NZ_CP013238\|CRISPRCasFinder	493938-493988	51	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	296581-296631	0	1.0
NZ_CP013238_2	2.1\|493938\|51\|NZ_CP013238\|CRISPRCasFinder	493938-493988	51	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	882019-882069	0	1.0
NZ_CP013238_2	2.1\|493938\|51\|NZ_CP013238\|CRISPRCasFinder	493938-493988	51	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	882034-882084	0	1.0
NZ_CP013238_2	2.1\|493938\|51\|NZ_CP013238\|CRISPRCasFinder	493938-493988	51	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	331611-331661	0	1.0
NZ_CP013238_3	3.1\|676989\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	676989-677024	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	676989-677024	0	1.0
NZ_CP013238_3	3.2\|677055\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677055-677089	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677055-677089	0	1.0
NZ_CP013238_3	3.2\|677055\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677055-677089	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682606-682640	0	1.0
NZ_CP013238_3	3.3\|677120\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677120-677154	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677120-677154	0	1.0
NZ_CP013238_3	3.4\|677185\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677185-677219	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677185-677219	0	1.0
NZ_CP013238_3	3.5\|677250\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677250-677285	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677250-677285	0	1.0
NZ_CP013238_3	3.6\|677316\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677316-677350	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677316-677350	0	1.0
NZ_CP013238_3	3.7\|677381\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677381-677414	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677381-677414	0	1.0
NZ_CP013238_3	3.8\|677445\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677445-677480	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677445-677480	0	1.0
NZ_CP013238_3	3.9\|677511\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677511-677544	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677511-677544	0	1.0
NZ_CP013238_3	3.10\|677575\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677575-677609	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677575-677609	0	1.0
NZ_CP013238_3	3.11\|677640\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677640-677673	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677640-677673	0	1.0
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677704-677737	0	1.0
NZ_CP013238_3	3.13\|677768\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677768-677803	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677768-677803	0	1.0
NZ_CP013238_3	3.14\|677834\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677834-677868	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677834-677868	0	1.0
NZ_CP013238_3	3.15\|677899\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677899-677932	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677899-677932	0	1.0
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677963-677998	0	1.0
NZ_CP013238_3	3.17\|678029\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678029-678064	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678029-678064	0	1.0
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678095-678128	0	1.0
NZ_CP013238_3	3.19\|678159\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678159-678192	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678159-678192	0	1.0
NZ_CP013238_3	3.20\|678223\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678223-678257	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678223-678257	0	1.0
NZ_CP013238_3	3.21\|678288\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678288-678323	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678288-678323	0	1.0
NZ_CP013238_3	3.22\|678354\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678354-678388	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678354-678388	0	1.0
NZ_CP013238_3	3.23\|678419\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678419-678454	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678419-678454	0	1.0
NZ_CP013238_3	3.24\|678485\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678485-678520	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678485-678520	0	1.0
NZ_CP013238_3	3.25\|678551\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678551-678585	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678551-678585	0	1.0
NZ_CP013238_3	3.26\|678616\|37\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678616-678652	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678616-678652	0	1.0
NZ_CP013238_3	3.27\|678683\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678683-678716	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678683-678716	0	1.0
NZ_CP013238_3	3.28\|678747\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678747-678782	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678747-678782	0	1.0
NZ_CP013238_3	3.29\|678813\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678813-678847	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678813-678847	0	1.0
NZ_CP013238_3	3.30\|678878\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678878-678912	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678878-678912	0	1.0
NZ_CP013238_3	3.31\|678943\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678943-678978	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	678943-678978	0	1.0
NZ_CP013238_3	3.32\|679009\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679009-679042	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679009-679042	0	1.0
NZ_CP013238_3	3.33\|679073\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679073-679107	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679073-679107	0	1.0
NZ_CP013238_3	3.34\|679138\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679138-679173	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679138-679173	0	1.0
NZ_CP013238_3	3.35\|679204\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679204-679239	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679204-679239	0	1.0
NZ_CP013238_3	3.36\|679270\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679270-679305	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679270-679305	0	1.0
NZ_CP013238_3	3.37\|679336\|37\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679336-679372	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679336-679372	0	1.0
NZ_CP013238_3	3.38\|679403\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679403-679438	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679403-679438	0	1.0
NZ_CP013238_3	3.39\|679469\|37\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679469-679505	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679469-679505	0	1.0
NZ_CP013238_3	3.40\|679536\|37\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679536-679572	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679536-679572	0	1.0
NZ_CP013238_3	3.41\|679603\|37\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679603-679639	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679603-679639	0	1.0
NZ_CP013238_3	3.42\|679670\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679670-679704	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679670-679704	0	1.0
NZ_CP013238_3	3.43\|679735\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679735-679769	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679735-679769	0	1.0
NZ_CP013238_3	3.44\|679800\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679800-679835	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679800-679835	0	1.0
NZ_CP013238_3	3.45\|679866\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679866-679901	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679866-679901	0	1.0
NZ_CP013238_3	3.46\|679932\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679932-679967	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679932-679967	0	1.0
NZ_CP013238_3	3.47\|679998\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679998-680032	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679998-680032	0	1.0
NZ_CP013238_3	3.48\|680063\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680063-680096	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680063-680096	0	1.0
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680127-680160	0	1.0
NZ_CP013238_3	3.50\|680191\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680191-680226	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680191-680226	0	1.0
NZ_CP013238_3	3.51\|680257\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680257-680290	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680257-680290	0	1.0
NZ_CP013238_3	3.52\|680321\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680321-680355	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680321-680355	0	1.0
NZ_CP013238_3	3.53\|680386\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680386-680419	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680386-680419	0	1.0
NZ_CP013238_3	3.54\|680450\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680450-680484	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680450-680484	0	1.0
NZ_CP013238_3	3.55\|680515\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680515-680548	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680515-680548	0	1.0
NZ_CP013238_3	3.56\|680579\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680579-680614	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680579-680614	0	1.0
NZ_CP013238_3	3.57\|680645\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680645-680680	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680645-680680	0	1.0
NZ_CP013238_3	3.58\|680711\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680711-680745	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680711-680745	0	1.0
NZ_CP013238_3	3.58\|680711\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680711-680745	35	NZ_AP019719	Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence	2992-3026	0	1.0
NZ_CP013238_3	3.59\|680776\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680776-680809	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680776-680809	0	1.0
NZ_CP013238_3	3.60\|680840\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680840-680875	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680840-680875	0	1.0
NZ_CP013238_3	3.61\|680906\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680906-680939	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680906-680939	0	1.0
NZ_CP013238_3	3.62\|680970\|37\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680970-681006	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	680970-681006	0	1.0
NZ_CP013238_3	3.63\|681037\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681037-681070	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681037-681070	0	1.0
NZ_CP013238_3	3.64\|681101\|38\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681101-681138	38	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681101-681138	0	1.0
NZ_CP013238_3	3.65\|681169\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681169-681204	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681169-681204	0	1.0
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681235-681270	0	1.0
NZ_CP013238_3	3.67\|681301\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681301-681336	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681301-681336	0	1.0
NZ_CP013238_3	3.68\|681367\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681367-681401	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681367-681401	0	1.0
NZ_CP013238_3	3.69\|681432\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681432-681467	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681432-681467	0	1.0
NZ_CP013238_3	3.70\|681498\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681498-681532	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681498-681532	0	1.0
NZ_CP013238_3	3.71\|681563\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681563-681596	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681563-681596	0	1.0
NZ_CP013238_3	3.72\|681627\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681627-681662	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681627-681662	0	1.0
NZ_CP013238_3	3.73\|681693\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681693-681728	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681693-681728	0	1.0
NZ_CP013238_3	3.74\|681759\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681759-681794	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681759-681794	0	1.0
NZ_CP013238_3	3.75\|681825\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681825-681859	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681825-681859	0	1.0
NZ_CP013238_3	3.76\|681890\|37\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681890-681926	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681890-681926	0	1.0
NZ_CP013238_3	3.77\|681957\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681957-681990	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	681957-681990	0	1.0
NZ_CP013238_3	3.78\|682021\|33\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	682021-682053	33	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682021-682053	0	1.0
NZ_CP013238_3	3.79\|682084\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	682084-682117	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682084-682117	0	1.0
NZ_CP013238_3	3.80\|682148\|35\|NZ_CP013238\|CRISPRCasFinder,CRT	682148-682182	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682148-682182	0	1.0
NZ_CP013238_3	3.81\|682213\|34\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682213-682246	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682213-682246	0	1.0
NZ_CP013238_3	3.82\|682277\|36\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682277-682312	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682277-682312	0	1.0
NZ_CP013238_3	3.83\|682343\|36\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682343-682378	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682343-682378	0	1.0
NZ_CP013238_3	3.84\|682409\|36\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682409-682444	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682409-682444	0	1.0
NZ_CP013238_3	3.85\|682475\|36\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682475-682510	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682475-682510	0	1.0
NZ_CP013238_3	3.86\|682541\|35\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682541-682575	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682541-682575	0	1.0
NZ_CP013238_3	3.87\|682606\|36\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682606-682641	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682606-682641	0	1.0
NZ_CP013238_3	3.88\|682672\|35\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682672-682706	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682672-682706	0	1.0
NZ_CP013238_3	3.89\|682737\|37\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682737-682773	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682737-682773	0	1.0
NZ_CP013238_3	3.90\|682804\|35\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682804-682838	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682804-682838	0	1.0
NZ_CP013238_3	3.91\|682869\|35\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682869-682903	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682869-682903	0	1.0
NZ_CP013238_3	3.92\|682934\|36\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682934-682969	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	682934-682969	0	1.0
NZ_CP013238_3	3.93\|683000\|34\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	683000-683033	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	683000-683033	0	1.0
NZ_CP013238_3	3.94\|683064\|35\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	683064-683098	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	683064-683098	0	1.0
NZ_CP013238_3	3.95\|683129\|34\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	683129-683162	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	683129-683162	0	1.0
NZ_CP013238_3	3.96\|683193\|36\|NZ_CP013238\|CRISPRCasFinder,CRT	683193-683228	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	683193-683228	0	1.0
NZ_CP013238_3	3.97\|683259\|36\|NZ_CP013238\|CRT	683259-683294	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	683259-683294	0	1.0
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578148-578186	0	1.0
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578196-578234	0	1.0
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675582-675620	0	1.0
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755168-755206	0	1.0
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755288-755326	0	1.0
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755408-755446	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675642-675680	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	59978-60016	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	577968-578006	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578088-578126	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578016-578054	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578136-578174	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755228-755266	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755348-755386	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755468-755506	0	1.0
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	63200-63238	0	1.0
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578148-578186	0	1.0
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578196-578234	0	1.0
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675582-675620	0	1.0
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755168-755206	0	1.0
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755288-755326	0	1.0
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755408-755446	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675642-675680	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	59978-60016	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	577968-578006	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578088-578126	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578016-578054	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578136-578174	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755228-755266	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755348-755386	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755468-755506	0	1.0
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	63200-63238	0	1.0
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578148-578186	0	1.0
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578196-578234	0	1.0
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675582-675620	0	1.0
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755168-755206	0	1.0
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755288-755326	0	1.0
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755408-755446	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675642-675680	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	59978-60016	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	577968-578006	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578088-578126	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578016-578054	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578136-578174	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755228-755266	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755348-755386	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	755468-755506	0	1.0
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	63200-63238	0	1.0
NZ_CP013238_1	1.1\|493764\|31\|NZ_CP013238\|CRISPRCasFinder	493764-493794	31	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	296775-296805	1	0.968
NZ_CP013238_1	1.1\|493764\|31\|NZ_CP013238\|CRISPRCasFinder	493764-493794	31	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	882213-882243	1	0.968
NZ_CP013238_1	1.1\|493764\|31\|NZ_CP013238\|CRISPRCasFinder	493764-493794	31	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	882228-882258	1	0.968
NZ_CP013238_1	1.1\|493764\|31\|NZ_CP013238\|CRISPRCasFinder	493764-493794	31	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	331805-331835	1	0.968
NZ_CP013238_1	1.1\|493764\|31\|NZ_CP013238\|CRISPRCasFinder	493764-493794	31	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	379188-379218	1	0.968
NZ_CP013238_3	3.59\|680776\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680776-680809	34	NZ_AP019719	Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence	1019-1052	1	0.971
NZ_CP013238_3	3.87\|682606\|36\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	682606-682641	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677055-677090	1	0.972
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578028-578066	1	0.974
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578076-578114	1	0.974
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675702-675740	1	0.974
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	60038-60076	1	0.974
NZ_CP013238_4	4.1\|755168\|39\|NZ_CP013238\|CRT	755168-755206	39	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	63260-63298	1	0.974
NZ_CP013238_4	4.2\|755228\|39\|NZ_CP013238\|CRT	755228-755266	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675762-675800	1	0.974
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578028-578066	1	0.974
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578076-578114	1	0.974
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675702-675740	1	0.974
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	60038-60076	1	0.974
NZ_CP013238_4	4.3\|755288\|39\|NZ_CP013238\|CRT	755288-755326	39	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	63260-63298	1	0.974
NZ_CP013238_4	4.4\|755348\|39\|NZ_CP013238\|CRT	755348-755386	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675762-675800	1	0.974
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578028-578066	1	0.974
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578076-578114	1	0.974
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675702-675740	1	0.974
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	60038-60076	1	0.974
NZ_CP013238_4	4.5\|755408\|39\|NZ_CP013238\|CRT	755408-755446	39	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	63260-63298	1	0.974
NZ_CP013238_4	4.6\|755468\|39\|NZ_CP013238\|CRT	755468-755506	39	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	675762-675800	1	0.974
NZ_CP013238_3	3.15\|677899\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677899-677932	34	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	679603-679636	2	0.941
NZ_CP013238_3	3.94\|683064\|35\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	683064-683098	35	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	68959-68993	2	0.943
NZ_CP013238_3	3.41\|679603\|37\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679603-679639	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	677899-677935	4	0.892
NZ_CP013238_3	3.97\|683259\|36\|NZ_CP013238\|CRT	683259-683294	36	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	614214-614249	4	0.889
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_KT897275	Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence	122413-122448	5	0.861
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_KT897276	Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence	117525-117560	6	0.833
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_KT897280	Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence	127251-127286	6	0.833
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_KT897277	Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence	117525-117560	6	0.833
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_KT897278	Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence	124676-124711	6	0.833
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_KT897279	Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence	125812-125847	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	KU925172	Escherichia phage PE37, complete genome	121553-121588	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MH051915	Enterobacteria phage vB_EcoM_IME339, complete genome	126174-126209	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MT446422	UNVERIFIED: Escherichia virus TH57, complete genome	109699-109734	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MK639187	Shigella phage SSE1, complete genome	67557-67592	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MT446396	UNVERIFIED: Escherichia virus TH22, complete genome	120714-120749	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MH359124	Escherichia phage SF, complete genome	76544-76579	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	NC_019399	Enterobacteria phage vB_EcoM_ACG-C40, complete genome	43809-43844	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MT446411	UNVERIFIED: Escherichia virus TH40, complete genome	84705-84740	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	KM407600	Shigella phage Shf125875, complete genome	45998-46033	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MT682713	Escherichia phage vB_EcoM_Ozark, complete genome	42826-42861	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MT446421	UNVERIFIED: Escherichia virus TH55, complete genome	97637-97672	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MN508618	UNVERIFIED: Escherichia phage ES26, complete genome	147822-147857	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	NC_025829	Shigella phage pSs-1, complete genome	45440-45475	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MN508614	UNVERIFIED: Escherichia phage ES12, complete genome	147471-147506	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	AP018932	Escherichia phage KIT03 DNA, complete sequence	41972-42007	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MH992122	UNVERIFIED: Escherichia phage OLB35, complete genome	46050-46085	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	KX452694	UNVERIFIED: Escherichia phage KPN1 genomic sequence	33023-33058	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MK373782	Escherichia phage vB_EcoM_KAW3E185, complete genome	46909-46944	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	MT446420	UNVERIFIED: Escherichia virus TH54, complete genome	98354-98389	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	KX452698	UNVERIFIED: Shigella phage KPN5 genomic sequence	44448-44483	6	0.833
NZ_CP013238_3	3.66\|681235\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681235-681270	36	JN202312	Enterobacteria phage ime09, complete genome	41445-41480	6	0.833
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	601696-601729	7	0.794
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	824618-824651	7	0.794
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	952064-952097	7	0.794
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	360315-360348	7	0.794
NZ_CP013238_3	3.32\|679009\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679009-679042	34	MF988720	Pseudoalteromonas phage J2-1, complete genome	65675-65708	7	0.794
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	MT675124	Providencia phage vB_PreS-PibeRecoleta, complete genome	345-378	7	0.794
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	NZ_CP015619	Acinetobacter schindleri strain ACE plasmid p4AsACE, complete sequence	7288-7321	8	0.765
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	MN693213	Marine virus AFVG_25M174, complete genome	31915-31948	8	0.765
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	MN693464	Marine virus AFVG_25M123, complete genome	1980-2013	8	0.765
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	MN693599	Marine virus AFVG_25M122, complete genome	32784-32817	8	0.765
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	MN693280	Marine virus AFVG_25M171, complete genome	31899-31932	8	0.765
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	MN693251	Marine virus AFVG_25M125, complete genome	2012-2045	8	0.765
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	MN693438	Marine virus AFVG_25M124, complete genome	32157-32190	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	AY082070	Bacteriophage phi3626, complete genome	24132-24165	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NC_003524	Clostridium phage phi3626, complete genome	24132-24165	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	99243-99276	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	87683-87716	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	99243-99276	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_CP015884	Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence	60601-60634	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	LR217706	Candidatus Erwinia sp. (ex Cinara spp.) strain ErCisplendens/pseudotsugae genome assembly, plasmid: pBioThi	1753-1786	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_CP048772	Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence	140891-140924	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	MK250016	Prevotella phage Lak-A1, complete genome	421774-421807	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	LN828719	endosymbiont DhMRE of Dentiscutata heterogama genome assembly DhMREa, plasmid : 2	1390-1423	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	MK250029	Prevotella phage Lak-C1, complete genome	387303-387336	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	MK250019	Prevotella phage Lak-A2, complete genome	340949-340982	8	0.765
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	231548-231581	8	0.765
NZ_CP013238_3	3.19\|678159\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678159-678192	34	NC_027989	Campylobacter phage vB_CcoM-IBB_35 clone Contig1, complete genome	6695-6728	8	0.765
NZ_CP013238_3	3.27\|678683\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678683-678716	34	NC_021737	Clostridium chauvoei, plasmid pcchauvoei, strain JF4335 complete sequence	3943-3976	8	0.765
NZ_CP013238_3	3.80\|682148\|35\|NZ_CP013238\|CRISPRCasFinder,CRT	682148-682182	35	MG945706	UNVERIFIED: Microviridae sp. isolate 1806-1801, complete genome	3187-3221	8	0.771
NZ_CP013238_3	3.80\|682148\|35\|NZ_CP013238\|CRISPRCasFinder,CRT	682148-682182	35	MG945817	UNVERIFIED: Microviridae sp. isolate 5714-1801, complete genome	3187-3221	8	0.771
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	NZ_CP025980	Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence	81969-82002	9	0.735
NZ_CP013238_3	3.12\|677704\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677704-677737	34	NZ_CP024873	Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence	60015-60048	9	0.735
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	22541-22574	9	0.735
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	233205-233238	9	0.735
NZ_CP013238_3	3.27\|678683\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678683-678716	34	AP013581	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C23-MedDCM-OCT-S23-C56, * SEQUENCING IN PROGRESS *	2157-2190	9	0.735
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NZ_KY086101	Rice orange leaf phytoplasma strain ROL1 plasmid pROL1, complete sequence	3342-3375	9	0.735
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NC_012088	Onion yellows phytoplasma plasmid EcOYW1, complete sequence	6088-6121	9	0.735
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NC_007717	Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-I, complete sequence	3088-3121	9	0.735
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NC_010406	Paulownia witches'-broom phytoplasma plasmid pPaWBNy-2, complete sequence	3091-3124	9	0.735
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NC_019243	Periwinkle leaf yellowing phytoplasma plasmid p05PLY-1, complete sequence	2473-2506	9	0.735
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NC_019244	Periwinkle leaf yellowing phytoplasma plasmid p08PLY-1, complete sequence	2537-2570	9	0.735
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NC_019246	Periwinkle leaf yellowing phytoplasma plasmid p05PLY-2, complete sequence	2591-2624	9	0.735
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NC_019247	Periwinkle leaf yellowing phytoplasma plasmid p09PLY-2, complete sequence	2417-2450	9	0.735
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NC_003353	Aster yellows phytoplasma plasmid extrachromosomal DNA, complete sequence	3473-3506	9	0.735
NZ_CP013238_3	3.57\|680645\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680645-680680	36	MN693806	Marine virus AFVG_250M575, complete genome	27436-27471	9	0.75
NZ_CP013238_3	3.57\|680645\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680645-680680	36	MN693625	Marine virus AFVG_250M334, complete genome	8050-8085	9	0.75
NZ_CP013238_3	3.71\|681563\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681563-681596	34	LC494302	Escherichia phage SP27 DNA, complete genome	44901-44934	9	0.735
NZ_CP013238_3	3.71\|681563\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681563-681596	34	KM507819	Escherichia phage 121Q, complete genome	44933-44966	9	0.735
NZ_CP013238_3	3.71\|681563\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681563-681596	34	NC_027364	Escherichia phage PBECO 4, complete genome	239724-239757	9	0.735
NZ_CP013238_3	3.71\|681563\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681563-681596	34	MK327931	Escherichia phage vB_EcoM_G17, complete genome	109940-109973	9	0.735
NZ_CP013238_3	3.77\|681957\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681957-681990	34	MN693504	Marine virus AFVG_25M410, complete genome	9354-9387	9	0.735
NZ_CP013238_3	3.79\|682084\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	682084-682117	34	CP016969	Staphylococcus epidermidis strain DAR1907 plasmid unnamed1, complete sequence	11210-11243	9	0.735
NZ_CP013238_3	3.79\|682084\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	682084-682117	34	MF417930	Uncultured Caudovirales phage clone 3S_1, partial genome	18218-18251	9	0.735
NZ_CP013238_3	3.79\|682084\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	682084-682117	34	MF417895	Uncultured Caudovirales phage clone 10AX_1, partial genome	13389-13422	9	0.735
NZ_CP013238_3	3.79\|682084\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	682084-682117	34	MF417909	Uncultured Caudovirales phage clone 10F_7, partial genome	4412-4445	9	0.735
NZ_CP013238_3	3.95\|683129\|34\|NZ_CP013238\|CRISPRCasFinder,CRT,PILER-CR	683129-683162	34	NZ_CP009219	Rickettsiales bacterium Ac37b plasmid 2, complete sequence	8055-8088	9	0.735
NZ_CP013238_3	3.5\|677250\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677250-677285	36	NZ_CP029389	Acinetobacter defluvii strain WCHA30 plasmid p1_010030, complete sequence	66852-66887	10	0.722
NZ_CP013238_3	3.11\|677640\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677640-677673	34	KX119194	Helicobacter phage FrG12G, complete genome	15541-15574	10	0.706
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	414954-414987	10	0.706
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	104138-104171	10	0.706
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	KU052037	Escherichia phage Rac-SA53, complete genome	24666-24699	10	0.706
NZ_CP013238_3	3.49\|680127\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	680127-680160	34	NZ_CP014792	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpB58, complete sequence	26073-26106	10	0.706
NZ_CP013238_3	3.70\|681498\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	681498-681532	35	NZ_CP025678	Escherichia albertii strain ChinaSP140150 plasmid pEA-2, complete sequence	10464-10498	10	0.714
NZ_CP013238_3	3.80\|682148\|35\|NZ_CP013238\|CRISPRCasFinder,CRT	682148-682182	35	NC_013160	Rippkaea orientalis PCC 8802 plasmid pP880201, complete sequence	12294-12328	10	0.714
NZ_CP013238_3	3.80\|682148\|35\|NZ_CP013238\|CRISPRCasFinder,CRT	682148-682182	35	NC_013160	Rippkaea orientalis PCC 8802 plasmid pP880201, complete sequence	16194-16228	10	0.714
NZ_CP013238_3	3.80\|682148\|35\|NZ_CP013238\|CRISPRCasFinder,CRT	682148-682182	35	NZ_CP048628	Megamonas funiformis strain JCM 14723 plasmid putative_Mfuni1, complete sequence	37887-37921	10	0.714
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_KJ776578	Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence	8437-8472	11	0.694
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_KJ776581	Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence	8437-8472	11	0.694
NZ_CP013238_3	3.16\|677963\|36\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	677963-677998	36	NZ_KJ776580	Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence	13248-13283	11	0.694
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	MN693286	Marine virus AFVG_25M92, complete genome	56-89	11	0.676
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	MN693286	Marine virus AFVG_25M92, complete genome	36619-36652	11	0.676
NZ_CP013238_3	3.42\|679670\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679670-679704	35	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	28246-28280	11	0.686
NZ_CP013238_3	3.42\|679670\|35\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	679670-679704	35	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	389553-389587	11	0.686
NZ_CP013238_3	3.79\|682084\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	682084-682117	34	NC_014535	Gloeothece verrucosa PCC 7822 plasmid Cy782206, complete sequence	1457-1490	11	0.676
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	286634-286667	12	0.647
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	291435-291468	12	0.647
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	302230-302263	12	0.647
NZ_CP013238_3	3.18\|678095\|34\|NZ_CP013238\|PILER-CR,CRISPRCasFinder,CRT	678095-678128	34	NZ_CP018322	Alteromonas macleodii strain Te101 plasmid pTE101a, complete sequence	356-389	12	0.647
NZ_CP013238_3	3.80\|682148\|35\|NZ_CP013238\|CRISPRCasFinder,CRT	682148-682182	35	AP013382	Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S45-C13	39086-39120	12	0.657

1. spacer 1.1|493764|31|NZ_CP013238|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cttgtgaacgaagttatcacgtttataagta	CRISPR spacer
cttgtgaacgaagttatcacgtttataagta	Protospacer
*******************************

2. spacer 2.1|493938|51|NZ_CP013238|CRISPRCasFinder matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	CRISPR spacer
cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	Protospacer
***************************************************

3. spacer 2.1|493938|51|NZ_CP013238|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	CRISPR spacer
cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	Protospacer
***************************************************

4. spacer 2.1|493938|51|NZ_CP013238|CRISPRCasFinder matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	CRISPR spacer
cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	Protospacer
***************************************************

5. spacer 2.1|493938|51|NZ_CP013238|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	CRISPR spacer
cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	Protospacer
***************************************************

6. spacer 2.1|493938|51|NZ_CP013238|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	CRISPR spacer
cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	Protospacer
***************************************************

7. spacer 2.1|493938|51|NZ_CP013238|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 0, identity: 1.0

cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	CRISPR spacer
cgaaacgcaatttttaataaaaataatagtaaaaaggagttgaattttgtt	Protospacer
***************************************************

8. spacer 3.1|676989|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggttgaaggtggagacacagataaagatattgca	CRISPR spacer
tgggttgaaggtggagacacagataaagatattgca	Protospacer
************************************

9. spacer 3.2|677055|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gcaaatttattctctaatgcattaaaagcacttgg	CRISPR spacer
gcaaatttattctctaatgcattaaaagcacttgg	Protospacer
***********************************

10. spacer 3.2|677055|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gcaaatttattctctaatgcattaaaagcacttgg	CRISPR spacer
gcaaatttattctctaatgcattaaaagcacttgg	Protospacer
***********************************

11. spacer 3.3|677120|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

taaaacagaagaagctaaagaaggatttagttggg	CRISPR spacer
taaaacagaagaagctaaagaaggatttagttggg	Protospacer
***********************************

12. spacer 3.4|677185|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggaaaagcacctaatatagcaataggaggattaga	CRISPR spacer
ggaaaagcacctaatatagcaataggaggattaga	Protospacer
***********************************

13. spacer 3.5|677250|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gctgtaacagaaatagaaacagttgttaatactggt	CRISPR spacer
gctgtaacagaaatagaaacagttgttaatactggt	Protospacer
************************************

14. spacer 3.6|677316|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gaactggaccatttcacctctaaagctgccggtgt	CRISPR spacer
gaactggaccatttcacctctaaagctgccggtgt	Protospacer
***********************************

15. spacer 3.7|677381|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttattataaacagacaggtgatattgctactctg	CRISPR spacer
ttattataaacagacaggtgatattgctactctg	Protospacer
**********************************

16. spacer 3.8|677445|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtctacctctgtatatagaaccatctaaccttata	CRISPR spacer
ggtctacctctgtatatagaaccatctaaccttata	Protospacer
************************************

17. spacer 3.9|677511|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

taattaatagccatgaagtacctaatatcatttt	CRISPR spacer
taattaatagccatgaagtacctaatatcatttt	Protospacer
**********************************

18. spacer 3.10|677575|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tgttttaagttatctaacgatgtttctgcataaat	CRISPR spacer
tgttttaagttatctaacgatgtttctgcataaat	Protospacer
***********************************

19. spacer 3.11|677640|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttatatattatttctcccttatttccattattga	CRISPR spacer
ttatatattatttctcccttatttccattattga	Protospacer
**********************************

20. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
gataataatttacttgaatatttaaatggagctg	Protospacer
**********************************

21. spacer 3.13|677768|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aaagaatggctattttccttactttcttgaacctgg	CRISPR spacer
aaagaatggctattttccttactttcttgaacctgg	Protospacer
************************************

22. spacer 3.14|677834|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gttagattatctccctattaggggattttataacg	CRISPR spacer
gttagattatctccctattaggggattttataacg	Protospacer
***********************************

23. spacer 3.15|677899|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttttggaagtacattagggaaaggtcttactg	CRISPR spacer
ttttttggaagtacattagggaaaggtcttactg	Protospacer
**********************************

24. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
tagcagagaaaatataaaatcattaccagcatatgc	Protospacer
************************************

25. spacer 3.17|678029|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aactattaaagaattcgaagataatgtagaaattat	CRISPR spacer
aactattaaagaattcgaagataatgtagaaattat	Protospacer
************************************

26. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

attacattttctaaataaataaaataaataaaag	CRISPR spacer
attacattttctaaataaataaaataaataaaag	Protospacer
**********************************

27. spacer 3.19|678159|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gaagataaaggaacaccataagggatattatcaa	CRISPR spacer
gaagataaaggaacaccataagggatattatcaa	Protospacer
**********************************

28. spacer 3.20|678223|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

atagatgaaaaacaaaagcgattaaaaacactatt	CRISPR spacer
atagatgaaaaacaaaagcgattaaaaacactatt	Protospacer
***********************************

29. spacer 3.21|678288|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tgtggatcaaacatgcaaatgagatatggtcccaaa	CRISPR spacer
tgtggatcaaacatgcaaatgagatatggtcccaaa	Protospacer
************************************

30. spacer 3.22|678354|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

agcagcactgaaatgcagatgaatgaaaataagat	CRISPR spacer
agcagcactgaaatgcagatgaatgaaaataagat	Protospacer
***********************************

31. spacer 3.23|678419|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aatagaaatcgataaaggaacgtgtatagcatgtgg	CRISPR spacer
aatagaaatcgataaaggaacgtgtatagcatgtgg	Protospacer
************************************

32. spacer 3.24|678485|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcagtaggacatttattacaacttaaagatata	CRISPR spacer
tgggcagtaggacatttattacaacttaaagatata	Protospacer
************************************

33. spacer 3.25|678551|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

agtaaagatttaataatgtttttaacaagcgttgc	CRISPR spacer
agtaaagatttaataatgtttttaacaagcgttgc	Protospacer
***********************************

34. spacer 3.26|678616|37|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

agcatgcccacctgaacctcctttgttaaaagttact	CRISPR spacer
agcatgcccacctgaacctcctttgttaaaagttact	Protospacer
*************************************

35. spacer 3.27|678683|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggattaactggtaaaataaaaaataaatcagaaa	CRISPR spacer
ggattaactggtaaaataaaaaataaatcagaaa	Protospacer
**********************************

36. spacer 3.28|678747|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

acagtttagaataatagataaagatacatctaatga	CRISPR spacer
acagtttagaataatagataaagatacatctaatga	Protospacer
************************************

37. spacer 3.29|678813|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacagatttattaaaaatggagctggctgaaaata	CRISPR spacer
gacagatttattaaaaatggagctggctgaaaata	Protospacer
***********************************

38. spacer 3.30|678878|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gttgcttggaagaaattactaccattaccagctgt	CRISPR spacer
gttgcttggaagaaattactaccattaccagctgt	Protospacer
***********************************

39. spacer 3.31|678943|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aaaatattctctatgagtagacaaccaaaaataaga	CRISPR spacer
aaaatattctctatgagtagacaaccaaaaataaga	Protospacer
************************************

40. spacer 3.32|679009|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

taatgaacatatgagatataattgggtagaaatt	CRISPR spacer
taatgaacatatgagatataattgggtagaaatt	Protospacer
**********************************

41. spacer 3.33|679073|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tctagtatattccaatttaagccatcatttgatcc	CRISPR spacer
tctagtatattccaatttaagccatcatttgatcc	Protospacer
***********************************

42. spacer 3.34|679138|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

taccttgagcgatataatgtatatcagtagaatcaa	CRISPR spacer
taccttgagcgatataatgtatatcagtagaatcaa	Protospacer
************************************

43. spacer 3.35|679204|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aagaatcccatatatactggttctacatatttacta	CRISPR spacer
aagaatcccatatatactggttctacatatttacta	Protospacer
************************************

44. spacer 3.36|679270|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttaagttgaactaaaaaacttgtattacacttctag	CRISPR spacer
ttaagttgaactaaaaaacttgtattacacttctag	Protospacer
************************************

45. spacer 3.37|679336|37|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

atattaaaataatccattaaagattgattgattaaac	CRISPR spacer
atattaaaataatccattaaagattgattgattaaac	Protospacer
*************************************

46. spacer 3.38|679403|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

actaactacccaagtgattattattatccagatgaa	CRISPR spacer
actaactacccaagtgattattattatccagatgaa	Protospacer
************************************

47. spacer 3.39|679469|37|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggagatagttttttataagttttagataatttaatca	CRISPR spacer
ggagatagttttttataagttttagataatttaatca	Protospacer
*************************************

48. spacer 3.40|679536|37|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tacattaacatgcagagcagttgaggagggtgaggct	CRISPR spacer
tacattaacatgcagagcagttgaggagggtgaggct	Protospacer
*************************************

49. spacer 3.41|679603|37|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttttggaagcacattaggaaaaggtcttactgcac	CRISPR spacer
ttttttggaagcacattaggaaaaggtcttactgcac	Protospacer
*************************************

50. spacer 3.42|679670|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gaaagcgaaaaagaaagattagatgagttatcatc	CRISPR spacer
gaaagcgaaaaagaaagattagatgagttatcatc	Protospacer
***********************************

51. spacer 3.43|679735|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttcattttcacattttaagccatacagtaaacc	CRISPR spacer
ttttcattttcacattttaagccatacagtaaacc	Protospacer
***********************************

52. spacer 3.44|679800|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

atactggatttgaagaagtatcttggggtaatagtg	CRISPR spacer
atactggatttgaagaagtatcttggggtaatagtg	Protospacer
************************************

53. spacer 3.45|679866|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

agtgaagttattactagagttgcagtttacgatagt	CRISPR spacer
agtgaagttattactagagttgcagtttacgatagt	Protospacer
************************************

54. spacer 3.46|679932|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gcatatgccgatacagagcataggttaaatgataaa	CRISPR spacer
gcatatgccgatacagagcataggttaaatgataaa	Protospacer
************************************

55. spacer 3.47|679998|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctccaaattacacaaaaaatactatattagaaaaa	CRISPR spacer
ctccaaattacacaaaaaatactatattagaaaaa	Protospacer
***********************************

56. spacer 3.48|680063|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

caggagctgtaataccagctttgatagcattaag	CRISPR spacer
caggagctgtaataccagctttgatagcattaag	Protospacer
**********************************

57. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
gatatgaaatatcaattctagataaaaataatgt	Protospacer
**********************************

58. spacer 3.50|680191|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tttccccattggcgtgcactattcatttttctttct	CRISPR spacer
tttccccattggcgtgcactattcatttttctttct	Protospacer
************************************

59. spacer 3.51|680257|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ataaaataccctttaagataggtcggctatcatc	CRISPR spacer
ataaaataccctttaagataggtcggctatcatc	Protospacer
**********************************

60. spacer 3.52|680321|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

agaaactccaatatctatatgtagaaagttaggtg	CRISPR spacer
agaaactccaatatctatatgtagaaagttaggtg	Protospacer
***********************************

61. spacer 3.53|680386|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aataaaattgctattttacttctacttactaccc	CRISPR spacer
aataaaattgctattttacttctacttactaccc	Protospacer
**********************************

62. spacer 3.54|680450|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

taataccaatcaagatatgaatttttttcttgtat	CRISPR spacer
taataccaatcaagatatgaatttttttcttgtat	Protospacer
***********************************

63. spacer 3.55|680515|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gcataaaaatctatttcgctttttgtttttccga	CRISPR spacer
gcataaaaatctatttcgctttttgtttttccga	Protospacer
**********************************

64. spacer 3.56|680579|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

caaggaagaaatatggttatgataaacggaggacaa	CRISPR spacer
caaggaagaaatatggttatgataaacggaggacaa	Protospacer
************************************

65. spacer 3.57|680645|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aaaccatacagaacattttaaaataatttataccac	CRISPR spacer
aaaccatacagaacattttaaaataatttataccac	Protospacer
************************************

66. spacer 3.58|680711|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttagcaaggtagaaaaattctccaccctgcttacc	CRISPR spacer
ttagcaaggtagaaaaattctccaccctgcttacc	Protospacer
***********************************

67. spacer 3.58|680711|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019719 (Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence) position: , mismatch: 0, identity: 1.0

ttagcaaggtagaaaaattctccaccctgcttacc	CRISPR spacer
ttagcaaggtagaaaaattctccaccctgcttacc	Protospacer
***********************************

68. spacer 3.59|680776|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gttattccagttataaccgttgagctatcacttc	CRISPR spacer
gttattccagttataaccgttgagctatcacttc	Protospacer
**********************************

69. spacer 3.60|680840|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aaagcacaatctttaggaacagataaagtcaatgaa	CRISPR spacer
aaagcacaatctttaggaacagataaagtcaatgaa	Protospacer
************************************

70. spacer 3.61|680906|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tttagtttaaatcatacaactccttatagtggca	CRISPR spacer
tttagtttaaatcatacaactccttatagtggca	Protospacer
**********************************

71. spacer 3.62|680970|37|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

atataattgggtatcaaatatggaacaagaagcaaag	CRISPR spacer
atataattgggtatcaaatatggaacaagaagcaaag	Protospacer
*************************************

72. spacer 3.63|681037|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ccttaaaaccaaaggtgaggattggaaaatgata	CRISPR spacer
ccttaaaaccaaaggtgaggattggaaaatgata	Protospacer
**********************************

73. spacer 3.64|681101|38|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ccattttaacaccaaagttttagttaactatacaccaa	CRISPR spacer
ccattttaacaccaaagttttagttaactatacaccaa	Protospacer
**************************************

74. spacer 3.65|681169|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gggctatattacagatagatatacaagctttacacc	CRISPR spacer
gggctatattacagatagatatacaagctttacacc	Protospacer
************************************

75. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
aatttaaccttgatactgaaaagtatggaagtgtat	Protospacer
************************************

76. spacer 3.67|681301|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aaaagaaaatgataaaaatataagtggttatattat	CRISPR spacer
aaaagaaaatgataaaaatataagtggttatattat	Protospacer
************************************

77. spacer 3.68|681367|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggaaatccatgtcaatacgctagttttcagacagc	CRISPR spacer
ggaaatccatgtcaatacgctagttttcagacagc	Protospacer
***********************************

78. spacer 3.69|681432|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aaatatctagttgttatatttttcattttaagcatt	CRISPR spacer
aaatatctagttgttatatttttcattttaagcatt	Protospacer
************************************

79. spacer 3.70|681498|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gggaatactgcaaataaaaaagtaagaactttacc	CRISPR spacer
gggaatactgcaaataaaaaagtaagaactttacc	Protospacer
***********************************

80. spacer 3.71|681563|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

agacatgaacctattttatcaccacgctttttaa	CRISPR spacer
agacatgaacctattttatcaccacgctttttaa	Protospacer
**********************************

81. spacer 3.72|681627|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggcaaaactgaaaccttaggaaactctaaaacttga	CRISPR spacer
ggcaaaactgaaaccttaggaaactctaaaacttga	Protospacer
************************************

82. spacer 3.73|681693|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gaaagtaattgtgaaaaaggaattttaaagttgtgt	CRISPR spacer
gaaagtaattgtgaaaaaggaattttaaagttgtgt	Protospacer
************************************

83. spacer 3.74|681759|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

agaaaactttacgcaagaagctctcgctgaatcttt	CRISPR spacer
agaaaactttacgcaagaagctctcgctgaatcttt	Protospacer
************************************

84. spacer 3.75|681825|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aaatgattgacttaataatacctattacaaggtcg	CRISPR spacer
aaatgattgacttaataatacctattacaaggtcg	Protospacer
***********************************

85. spacer 3.76|681890|37|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

taacatcttcttagcattcctctccaatattcataag	CRISPR spacer
taacatcttcttagcattcctctccaatattcataag	Protospacer
*************************************

86. spacer 3.77|681957|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gatataacattagaaccagatagtggagaaggaa	CRISPR spacer
gatataacattagaaccagatagtggagaaggaa	Protospacer
**********************************

87. spacer 3.78|682021|33|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gaagaagacaacagagaacttttatgtaaagag	CRISPR spacer
gaagaagacaacagagaacttttatgtaaagag	Protospacer
*********************************

88. spacer 3.79|682084|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaatattcagttaatttatataagtttttaa	CRISPR spacer
gacaaatattcagttaatttatataagtttttaa	Protospacer
**********************************

89. spacer 3.80|682148|35|NZ_CP013238|CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gatgatgataataatgatgatgataagctatttaa	CRISPR spacer
gatgatgataataatgatgatgataagctatttaa	Protospacer
***********************************

90. spacer 3.81|682213|34|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

agaagtggactagaagaagtagtaaataaattaa	CRISPR spacer
agaagtggactagaagaagtagtaaataaattaa	Protospacer
**********************************

91. spacer 3.82|682277|36|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aatatctgcataaggtgcagcagctctacactcgtt	CRISPR spacer
aatatctgcataaggtgcagcagctctacactcgtt	Protospacer
************************************

92. spacer 3.83|682343|36|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtggaaattttgaacagctttcttttgaaacattt	CRISPR spacer
ggtggaaattttgaacagctttcttttgaaacattt	Protospacer
************************************

93. spacer 3.84|682409|36|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tataatcatcctctcttatagcttatgaacgaattt	CRISPR spacer
tataatcatcctctcttatagcttatgaacgaattt	Protospacer
************************************

94. spacer 3.85|682475|36|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aactgggaattagctccatgtgctgatacaacaaaa	CRISPR spacer
aactgggaattagctccatgtgctgatacaacaaaa	Protospacer
************************************

95. spacer 3.86|682541|35|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tgtttaattactgctgctatcaaattaggatcaac	CRISPR spacer
tgtttaattactgctgctatcaaattaggatcaac	Protospacer
***********************************

96. spacer 3.87|682606|36|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gcaaatttattctctaatgcattaaaagcacttggc	CRISPR spacer
gcaaatttattctctaatgcattaaaagcacttggc	Protospacer
************************************

97. spacer 3.88|682672|35|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttagaaaaagatttagatagtaggatatgggaaga	CRISPR spacer
ttagaaaaagatttagatagtaggatatgggaaga	Protospacer
***********************************

98. spacer 3.89|682737|37|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gaggatgcactgaaagagataagaaaaatataagagc	CRISPR spacer
gaggatgcactgaaagagataagaaaaatataagagc	Protospacer
*************************************

99. spacer 3.90|682804|35|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gttggagaatctgttgtgctaaatttattactact	CRISPR spacer
gttggagaatctgttgtgctaaatttattactact	Protospacer
***********************************

100. spacer 3.91|682869|35|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctacatgtattttttacaccttcccatgtttcacc	CRISPR spacer
ctacatgtattttttacaccttcccatgtttcacc	Protospacer
***********************************

101. spacer 3.92|682934|36|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

atgtatcatatccactttcacctaaatcaaatcttg	CRISPR spacer
atgtatcatatccactttcacctaaatcaaatcttg	Protospacer
************************************

102. spacer 3.93|683000|34|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

taactataagctcttaacacacaaccgcctttaa	CRISPR spacer
taactataagctcttaacacacaaccgcctttaa	Protospacer
**********************************

103. spacer 3.94|683064|35|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

tgatatctttcttcttccggagcctgaactcctcc	CRISPR spacer
tgatatctttcttcttccggagcctgaactcctcc	Protospacer
***********************************

104. spacer 3.95|683129|34|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

atccacccttgatagaacttagtttccttctgag	CRISPR spacer
atccacccttgatagaacttagtttccttctgag	Protospacer
**********************************

105. spacer 3.96|683193|36|NZ_CP013238|CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

atctttctaatcataattgtttcaatgtcttctaat	CRISPR spacer
atctttctaatcataattgtttcaatgtcttctaat	Protospacer
************************************

106. spacer 3.97|683259|36|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gggttagcagaaaaaggattttaatagagaattaac	CRISPR spacer
gggttagcagaaaaaggattttaatagagaattaac	Protospacer
************************************

107. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

108. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

109. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

110. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

111. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

112. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

113. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

114. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

115. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

116. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

117. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

118. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

119. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

120. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

121. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

122. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

123. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

124. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

125. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

126. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

127. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

128. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

129. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

130. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

131. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

132. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

133. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

134. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

135. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

136. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

137. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

138. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

139. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

140. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

141. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

142. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

143. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

144. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gacaaagattcatggtattatctaagtgaaagtggatca	Protospacer
***************************************

145. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

146. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

147. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

148. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

149. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

150. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

151. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

152. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

153. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

154. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 0, identity: 1.0

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcagaagctggagat	Protospacer
***************************************

155. spacer 1.1|493764|31|NZ_CP013238|CRISPRCasFinder matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 1, identity: 0.968

cttgtgaacgaagttatcacgtttataagta	CRISPR spacer
cttgtgaaccaagttatcacgtttataagta	Protospacer
********* *********************

156. spacer 1.1|493764|31|NZ_CP013238|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 1, identity: 0.968

cttgtgaacgaagttatcacgtttataagta	CRISPR spacer
cttgtgaaccaagttatcacgtttataagta	Protospacer
********* *********************

157. spacer 1.1|493764|31|NZ_CP013238|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 1, identity: 0.968

cttgtgaacgaagttatcacgtttataagta	CRISPR spacer
cttgtgaaccaagttatcacgtttataagta	Protospacer
********* *********************

158. spacer 1.1|493764|31|NZ_CP013238|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 1, identity: 0.968

cttgtgaacgaagttatcacgtttataagta	CRISPR spacer
cttgtgaaccaagttatcacgtttataagta	Protospacer
********* *********************

159. spacer 1.1|493764|31|NZ_CP013238|CRISPRCasFinder matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 1, identity: 0.968

cttgtgaacgaagttatcacgtttataagta	CRISPR spacer
cttgtgaaccaagttatcacgtttataagta	Protospacer
********* *********************

160. spacer 3.59|680776|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019719 (Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence) position: , mismatch: 1, identity: 0.971

gttattccagttataaccgttgagctatcacttc	CRISPR spacer
gttattccagttataactgttgagctatcacttc	Protospacer
*****************.****************

161. spacer 3.87|682606|36|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 1, identity: 0.972

gcaaatttattctctaatgcattaaaagcacttggc	CRISPR spacer
gcaaatttattctctaatgcattaaaagcacttggg	Protospacer
***********************************

162. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

163. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

164. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

165. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

166. spacer 4.1|755168|39|NZ_CP013238|CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

167. spacer 4.2|755228|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 1, identity: 0.974

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcaaaagctggagat	Protospacer
***************************.***********

168. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

169. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

170. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

171. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

172. spacer 4.3|755288|39|NZ_CP013238|CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

173. spacer 4.4|755348|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 1, identity: 0.974

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcaaaagctggagat	Protospacer
***************************.***********

174. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

175. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

176. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

177. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

178. spacer 4.5|755408|39|NZ_CP013238|CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 1, identity: 0.974

gacaaagattcatggtattatctaagtgaaagtggatca	CRISPR spacer
gataaagattcatggtattatctaagtgaaagtggatca	Protospacer
**.************************************

179. spacer 4.6|755468|39|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 1, identity: 0.974

cacggaaatgactggtattatctttcagaagctggagat	CRISPR spacer
cacggaaatgactggtattatctttcaaaagctggagat	Protospacer
***************************.***********

180. spacer 3.15|677899|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 2, identity: 0.941

ttttttggaagtacattagggaaaggtcttactg	CRISPR spacer
ttttttggaagcacattaggaaaaggtcttactg	Protospacer
***********.********.*************

181. spacer 3.94|683064|35|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 2, identity: 0.943

tgatatctttcttcttccggagcctgaactcctcc	CRISPR spacer
tggcatctttcttcttccggagcctgaactcctcc	Protospacer
**..*******************************

182. spacer 3.41|679603|37|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 4, identity: 0.892

ttttttggaagcacattaggaaaaggtcttactgcac	CRISPR spacer
ttttttggaagtacattagggaaaggtcttactggat	Protospacer
***********.********.************* *.

183. spacer 3.97|683259|36|NZ_CP013238|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 4, identity: 0.889

gggttagcagaaaaaggattttaatagagaattaac	CRISPR spacer
ttggttgcagaaaaaggattttaatagagaattaac	Protospacer
  * * ******************************

184. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 5, identity: 0.861

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
aagtcgtgaaaatataaaatcattacctgcatatgc	Protospacer
 **. * ******************** ********

185. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 6, identity: 0.833

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
aagtcgtgaaaatataaaatcattgcctgcatatgc	Protospacer
 **. * *****************.** ********

186. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 6, identity: 0.833

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
aagtcgtgaaaatataaaatcattgcctgcatatgc	Protospacer
 **. * *****************.** ********

187. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 6, identity: 0.833

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
aagtcgtgaaaatataaaatcattgcctgcatatgc	Protospacer
 **. * *****************.** ********

188. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 6, identity: 0.833

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
aagtcgtgaaaatataaaatcattgcctgcatatgc	Protospacer
 **. * *****************.** ********

189. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 6, identity: 0.833

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
aagtcgtgaaaatataaaatcattgcctgcatatgc	Protospacer
 **. * *****************.** ********

190. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to KU925172 (Escherichia phage PE37, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

191. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MH051915 (Enterobacteria phage vB_EcoM_IME339, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

192. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MT446422 (UNVERIFIED: Escherichia virus TH57, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

193. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MK639187 (Shigella phage SSE1, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

194. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MT446396 (UNVERIFIED: Escherichia virus TH22, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

195. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MH359124 (Escherichia phage SF, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

196. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_019399 (Enterobacteria phage vB_EcoM_ACG-C40, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

197. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MT446411 (UNVERIFIED: Escherichia virus TH40, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

198. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to KM407600 (Shigella phage Shf125875, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

199. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MT682713 (Escherichia phage vB_EcoM_Ozark, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

200. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MT446421 (UNVERIFIED: Escherichia virus TH55, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

201. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN508618 (UNVERIFIED: Escherichia phage ES26, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

202. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_025829 (Shigella phage pSs-1, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

203. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN508614 (UNVERIFIED: Escherichia phage ES12, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

204. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to AP018932 (Escherichia phage KIT03 DNA, complete sequence) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

205. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MH992122 (UNVERIFIED: Escherichia phage OLB35, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

206. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to KX452694 (UNVERIFIED: Escherichia phage KPN1 genomic sequence) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

207. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MK373782 (Escherichia phage vB_EcoM_KAW3E185, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

208. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MT446420 (UNVERIFIED: Escherichia virus TH54, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

209. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to KX452698 (UNVERIFIED: Shigella phage KPN5 genomic sequence) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

210. spacer 3.66|681235|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to JN202312 (Enterobacteria phage ime09, complete genome) position: , mismatch: 6, identity: 0.833

aatttaaccttgatactgaaaagtatggaagtgtat	CRISPR spacer
tctgtaaacttgatactgaaaaatatggaagtgtaa	Protospacer
  * *** **************.************

211. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.794

attacattttctaaataaataaaataaataaaag	CRISPR spacer
aatttattttttaaaaaaataaaataaataaatt	Protospacer
* * .*****.**** ****************

212. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.794

attacattttctaaataaataaaataaataaaag	CRISPR spacer
aatttattttttaaaaaaataaaataaataaatt	Protospacer
* * .*****.**** ****************

213. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.794

-attacattttctaaataaataaaataaataaaag	CRISPR spacer
aaatttatttt-taaaaaaataaaataaataaatt	Protospacer
 * * .***** **** ****************

214. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.794

-attacattttctaaataaataaaataaataaaag	CRISPR spacer
aaatttatttt-taaaaaaataaaataaataaatt	Protospacer
 * * .***** **** ****************

215. spacer 3.32|679009|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MF988720 (Pseudoalteromonas phage J2-1, complete genome) position: , mismatch: 7, identity: 0.794

taatgaacatatgagatataattgggtagaaatt	CRISPR spacer
taatgaacatattaaatataattggttggttttt	Protospacer
************ *.********** *.*   **

216. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MT675124 (Providencia phage vB_PreS-PibeRecoleta, complete genome) position: , mismatch: 7, identity: 0.794

gatatgaa-atatcaattctagataaaaataatgt	CRISPR spacer
-aaataaatatataaatactagataaaaataataa	Protospacer
 * **.** **** *** ***************.

217. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015619 (Acinetobacter schindleri strain ACE plasmid p4AsACE, complete sequence) position: , mismatch: 8, identity: 0.765

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
caagtcaatttaattgaatatttaaatggagcac	Protospacer
 * . .****** *******************

218. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693213 (Marine virus AFVG_25M174, complete genome) position: , mismatch: 8, identity: 0.765

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
aaacataatttaattgaatatctaaatgcctctg	Protospacer
.*  ******** ********.******   ***

219. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693464 (Marine virus AFVG_25M123, complete genome) position: , mismatch: 8, identity: 0.765

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
aaacataatttaattgaatatctaaatgcctctg	Protospacer
.*  ******** ********.******   ***

220. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693599 (Marine virus AFVG_25M122, complete genome) position: , mismatch: 8, identity: 0.765

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
aaacataatttaattgaatatctaaatgcctctg	Protospacer
.*  ******** ********.******   ***

221. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693280 (Marine virus AFVG_25M171, complete genome) position: , mismatch: 8, identity: 0.765

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
aaacataatttaattgaatatctaaatgcctctg	Protospacer
.*  ******** ********.******   ***

222. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693251 (Marine virus AFVG_25M125, complete genome) position: , mismatch: 8, identity: 0.765

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
aaacataatttaattgaatatctaaatgcctctg	Protospacer
.*  ******** ********.******   ***

223. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693438 (Marine virus AFVG_25M124, complete genome) position: , mismatch: 8, identity: 0.765

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
aaacataatttaattgaatatctaaatgcctctg	Protospacer
.*  ******** ********.******   ***

224. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to AY082070 (Bacteriophage phi3626, complete genome) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
aaaaatttttctaaatatataaaagaaataaatc	Protospacer
*  *  *********** ****** *******

225. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_003524 (Clostridium phage phi3626, complete genome) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
aaaaatttttctaaatatataaaagaaataaatc	Protospacer
*  *  *********** ****** *******

226. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
aggattatttataaataaaaaaaataaataaaaa	Protospacer
*  *.  *** ******** *************.

227. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
aggattatttataaataaaaaaaataaataaaac	Protospacer
*  *.  *** ******** *************

228. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
aggattatttataaataaaaaaaataaataaaaa	Protospacer
*  *.  *** ******** *************.

229. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015884 (Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
aaaattttttccaaataaataaaataaaaaatat	Protospacer
*  *. *****.**************** ** *

230. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to LR217706 (Candidatus Erwinia sp. (ex Cinara spp.) strain ErCisplendens/pseudotsugae genome assembly, plasmid: pBioThi) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
tttgaattttaaaaataaataaaataaatattat	Protospacer
 **. *****  ******************  *

231. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048772 (Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence) position: , mismatch: 8, identity: 0.765

-attacattttctaaataaataaaataaataaaag	CRISPR spacer
caata-gttttcaaaaaaaataaaataaataattt	Protospacer
 * ** .***** *** ***************

232. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
atcccattttttagataaataaaataaaatataa	Protospacer
**. ******.**.**************  * *.

233. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to LN828719 (endosymbiont DhMRE of Dentiscutata heterogama genome assembly DhMREa, plasmid : 2) position: , mismatch: 8, identity: 0.765

----attacattttctaaataaataaaataaataaaag	CRISPR spacer
aaagataa----ttttaattaaataaaataaataaagg	Protospacer
    ** *    **.*** *****************.*

234. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
atcccattttttagataaataaaataaaatataa	Protospacer
**. ******.**.**************  * *.

235. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
atcccattttttagataaataaaataaaatataa	Protospacer
**. ******.**.**************  * *.

236. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 8, identity: 0.765

attacattttctaaataaataaaataaataaaag	CRISPR spacer
aatacattttctaattaaataaattataggaata	Protospacer
* ************ ******** ** * .** .

237. spacer 3.19|678159|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_027989 (Campylobacter phage vB_CcoM-IBB_35 clone Contig1, complete genome) position: , mismatch: 8, identity: 0.765

gaagataaaggaacaccataagggatattatcaa	CRISPR spacer
acagcaaattgatcaccataagggatataatcaa	Protospacer
. **  **  ** *************** *****

238. spacer 3.27|678683|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_021737 (Clostridium chauvoei, plasmid pcchauvoei, strain JF4335 complete sequence) position: , mismatch: 8, identity: 0.765

ggattaactggtaaaataaaaaataaatcagaaa	CRISPR spacer
agattaactagtaaaataaagaataaattttgga	Protospacer
.********.**********.*******.  ..*

239. spacer 3.80|682148|35|NZ_CP013238|CRISPRCasFinder,CRT matches to MG945706 (UNVERIFIED: Microviridae sp. isolate 1806-1801, complete genome) position: , mismatch: 8, identity: 0.771

gatgatgataataatgatgatgataagctatttaa	CRISPR spacer
gctcaaggtaatactgatgatgataaggtatttgg	Protospacer
* * * *.***** ************* *****..

240. spacer 3.80|682148|35|NZ_CP013238|CRISPRCasFinder,CRT matches to MG945817 (UNVERIFIED: Microviridae sp. isolate 5714-1801, complete genome) position: , mismatch: 8, identity: 0.771

gatgatgataataatgatgatgataagctatttaa	CRISPR spacer
gctcaaggtaatactgatgatgataaggtatttgg	Protospacer
* * * *.***** ************* *****..

241. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025980 (Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence) position: , mismatch: 9, identity: 0.735

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
cataataatttccttgaaaatttaacctgagtat	Protospacer
 ********** ****** ****** . ***.

242. spacer 3.12|677704|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024873 (Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence) position: , mismatch: 9, identity: 0.735

gataataatttacttgaatatttaaatggagctg	CRISPR spacer
aaaaataatttaattcaatatttaaattgtaatt	Protospacer
.* ********* ** *********** * . *

243. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 9, identity: 0.735

attacattttctaaataaataaaataaataaaag	CRISPR spacer
gcaacgtcacctaaataaattaaataaacaaaag	Protospacer
.. **.*. .********** *******.*****

244. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attacattttctaaataaataaaataaataaaag	CRISPR spacer
gcaacgtcacctaaataaattaaataaacaaaag	Protospacer
.. **.*. .********** *******.*****

245. spacer 3.27|678683|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to AP013581 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C23-MedDCM-OCT-S23-C56, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.735

ggattaactggtaaaataaaaaataaatcagaaa	CRISPR spacer
aaaaaaactggtaaaataaaaattgaatctgtac	Protospacer
..*  ***************** *.**** * *

246. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY086101 (Rice orange leaf phytoplasma strain ROL1 plasmid pROL1, complete sequence) position: , mismatch: 9, identity: 0.735

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
aattatttaaatcaattcaagataaaaataaagt	Protospacer
.**     * ******** ************ **

247. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_012088 (Onion yellows phytoplasma plasmid EcOYW1, complete sequence) position: , mismatch: 9, identity: 0.735

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
aattctttaaatcaattcaagataaaaataaagt	Protospacer
.** .   * ******** ************ **

248. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_007717 (Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-I, complete sequence) position: , mismatch: 9, identity: 0.735

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
aattatttaaatcaattcaagataaaaataaagt	Protospacer
.**     * ******** ************ **

249. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_010406 (Paulownia witches'-broom phytoplasma plasmid pPaWBNy-2, complete sequence) position: , mismatch: 9, identity: 0.735

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
aattatttaaatcaattcaagataaaaataaagt	Protospacer
.**     * ******** ************ **

250. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_019243 (Periwinkle leaf yellowing phytoplasma plasmid p05PLY-1, complete sequence) position: , mismatch: 9, identity: 0.735

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
aattatttaaatcaattcaagataaaaataaagt	Protospacer
.**     * ******** ************ **

251. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_019244 (Periwinkle leaf yellowing phytoplasma plasmid p08PLY-1, complete sequence) position: , mismatch: 9, identity: 0.735

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
aattctttaaatcaattcaagataaaaataaagt	Protospacer
.** .   * ******** ************ **

252. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_019246 (Periwinkle leaf yellowing phytoplasma plasmid p05PLY-2, complete sequence) position: , mismatch: 9, identity: 0.735

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
aattatttaaatcaattcaagataaaaataaagt	Protospacer
.**     * ******** ************ **

253. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_019247 (Periwinkle leaf yellowing phytoplasma plasmid p09PLY-2, complete sequence) position: , mismatch: 9, identity: 0.735

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
aattatttaaatcaattcaagataaaaataaagt	Protospacer
.**     * ******** ************ **

254. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_003353 (Aster yellows phytoplasma plasmid extrachromosomal DNA, complete sequence) position: , mismatch: 9, identity: 0.735

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
aattatttaaatcaattcaagataaaaataaagt	Protospacer
.**     * ******** ************ **

255. spacer 3.57|680645|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693806 (Marine virus AFVG_250M575, complete genome) position: , mismatch: 9, identity: 0.75

aaaccatacagaacattttaaaataatttataccac	CRISPR spacer
aaaccataaagaacattttaatataagaaagaaaaa	Protospacer
******** ************ ****   * *  *

256. spacer 3.57|680645|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693625 (Marine virus AFVG_250M334, complete genome) position: , mismatch: 9, identity: 0.75

aaaccatacagaacattttaaaataatttataccac	CRISPR spacer
aaaccataaagaacattttaatataagaaagaaaaa	Protospacer
******** ************ ****   * *  *

257. spacer 3.71|681563|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 9, identity: 0.735

agacatgaacctattttatcaccacgctttttaa	CRISPR spacer
ccacctgaaccgattttatcaccacgtgcgttta	Protospacer
  ** ****** **************. . ** *

258. spacer 3.71|681563|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 9, identity: 0.735

agacatgaacctattttatcaccacgctttttaa	CRISPR spacer
ccacctgaaccaattttatcaccacgtgcgttta	Protospacer
  ** ****** **************. . ** *

259. spacer 3.71|681563|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 9, identity: 0.735

agacatgaacctattttatcaccacgctttttaa	CRISPR spacer
ccacctgaaccgattttatcaccacgtgcgttta	Protospacer
  ** ****** **************. . ** *

260. spacer 3.71|681563|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 9, identity: 0.735

agacatgaacctattttatcaccacgctttttaa	CRISPR spacer
ccacctgaaccgattttatcaccacgtgcgttta	Protospacer
  ** ****** **************. . ** *

261. spacer 3.77|681957|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693504 (Marine virus AFVG_25M410, complete genome) position: , mismatch: 9, identity: 0.735

gatataacattagaaccagatagtggagaaggaa	CRISPR spacer
tgtcaaccaatagaacaagatagtggagaagata	Protospacer
 .*  * ** ****** **************. *

262. spacer 3.79|682084|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to CP016969 (Staphylococcus epidermidis strain DAR1907 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

gacaaatattcagttaatttatataagtttttaa	CRISPR spacer
tgaacatattcagctaattcatataagttgctta	Protospacer
 . * ********.*****.********* .* *

263. spacer 3.79|682084|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MF417930 (Uncultured Caudovirales phage clone 3S_1, partial genome) position: , mismatch: 9, identity: 0.735

gacaaatattcagttaatttatataagtttttaa	CRISPR spacer
tgaacatattcagctaattcatataagttactta	Protospacer
 . * ********.*****.********* .* *

264. spacer 3.79|682084|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MF417895 (Uncultured Caudovirales phage clone 10AX_1, partial genome) position: , mismatch: 9, identity: 0.735

gacaaatattcagttaatttatataagtttttaa	CRISPR spacer
tgaacatattcagctaattcatataagttgctta	Protospacer
 . * ********.*****.********* .* *

265. spacer 3.79|682084|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MF417909 (Uncultured Caudovirales phage clone 10F_7, partial genome) position: , mismatch: 9, identity: 0.735

gacaaatattcagttaatttatataagtttttaa	CRISPR spacer
tgaacatattcagctaattcatataagttgctta	Protospacer
 . * ********.*****.********* .* *

266. spacer 3.95|683129|34|NZ_CP013238|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009219 (Rickettsiales bacterium Ac37b plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.735

atccacccttgatagaacttagtttccttctgag	CRISPR spacer
gtagatgcttgatagaacttagtttttttctcaa	Protospacer
.*  *. ******************..**** *.

267. spacer 3.5|677250|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029389 (Acinetobacter defluvii strain WCHA30 plasmid p1_010030, complete sequence) position: , mismatch: 10, identity: 0.722

gctgtaacagaaatagaaacagttgttaatactggt	CRISPR spacer
aaagcgcaagaaatcgaaacagttgttaataatgat	Protospacer
.  *..  ****** **************** **.*

268. spacer 3.11|677640|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to KX119194 (Helicobacter phage FrG12G, complete genome) position: , mismatch: 10, identity: 0.706

ttatatattatttctcccttatttccattattga	CRISPR spacer
gctcgatttctttctctcttatttccattattta	Protospacer
 . ..  ** ******.*************** *

269. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 10, identity: 0.706

attacattttctaaataaataaaataaataaaag	CRISPR spacer
gtgtaattttctgaataaacaaaataaattgtgg	Protospacer
.*   *******.******.********* . .*

270. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 10, identity: 0.706

attacattttctaaataaataaaataaataaaag	CRISPR spacer
gtgtaattttctgaataaacaaaataaattgtgg	Protospacer
.*   *******.******.********* . .*

271. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to KU052037 (Escherichia phage Rac-SA53, complete genome) position: , mismatch: 10, identity: 0.706

attacattttctaaataaataaaa-------taaataaaag	CRISPR spacer
attagattttctcaataaataaaaatctccttac-------	Protospacer
**** ******* ***********       **

272. spacer 3.49|680127|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014792 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpB58, complete sequence) position: , mismatch: 10, identity: 0.706

gatatgaaatatcaattctagataaaaataatgt	CRISPR spacer
tagcaaatatattaattgtagataaaaataatag	Protospacer
 *   .* ****.**** **************.

273. spacer 3.70|681498|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025678 (Escherichia albertii strain ChinaSP140150 plasmid pEA-2, complete sequence) position: , mismatch: 10, identity: 0.714

gggaatactgcaaataaaaaagtaagaactttacc	CRISPR spacer
agcaatacagcaaataaagaagtaagaagaaaata	Protospacer
.* ***** *********.*********    *.

274. spacer 3.80|682148|35|NZ_CP013238|CRISPRCasFinder,CRT matches to NC_013160 (Rippkaea orientalis PCC 8802 plasmid pP880201, complete sequence) position: , mismatch: 10, identity: 0.714

gatgatgataataatgatgatgataagctatttaa	CRISPR spacer
gatgatgatgatgatgatgatgataatgatgacag	Protospacer
*********.**.*************      .*.

275. spacer 3.80|682148|35|NZ_CP013238|CRISPRCasFinder,CRT matches to NC_013160 (Rippkaea orientalis PCC 8802 plasmid pP880201, complete sequence) position: , mismatch: 10, identity: 0.714

gatgatgataataatgatgatgataagctatttaa	CRISPR spacer
gatgatgatgatgatgatgatgataatgatgacag	Protospacer
*********.**.*************      .*.

276. spacer 3.80|682148|35|NZ_CP013238|CRISPRCasFinder,CRT matches to NZ_CP048628 (Megamonas funiformis strain JCM 14723 plasmid putative_Mfuni1, complete sequence) position: , mismatch: 10, identity: 0.714

gatgatgataataatgatgatgataagctatttaa	CRISPR spacer
gatgataataataatgatgacgatatagaacaaga	Protospacer
******.*************.**** .  *.  .*

277. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ776578 (Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence) position: , mismatch: 11, identity: 0.694

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
agaaaaagaaaatataaaatcaataccatcatgcta	Protospacer
 .. *.**************** ***** ***..

278. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ776581 (Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence) position: , mismatch: 11, identity: 0.694

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
agaaaaagaaaatataaaatcaataccatcatgcta	Protospacer
 .. *.**************** ***** ***..

279. spacer 3.16|677963|36|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ776580 (Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence) position: , mismatch: 11, identity: 0.694

tagcagagaaaatataaaatcattaccagcatatgc	CRISPR spacer
agaaaaagaaaatataaaatcaataccatcatgcta	Protospacer
 .. *.**************** ***** ***..

280. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693286 (Marine virus AFVG_25M92, complete genome) position: , mismatch: 11, identity: 0.676

attacattttctaaataaataaaataaataaaag	CRISPR spacer
tcccgggtctctatataaaaaaaataaataaaat	Protospacer
 ..  . *.**** ***** *************

281. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to MN693286 (Marine virus AFVG_25M92, complete genome) position: , mismatch: 11, identity: 0.676

attacattttctaaataaataaaataaataaaag	CRISPR spacer
tcccgggtctctatataaaaaaaataaataaaat	Protospacer
 ..  . *.**** ***** *************

282. spacer 3.42|679670|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 11, identity: 0.686

gaaagcgaaaaagaaagattagatgagttatcatc	CRISPR spacer
aggatggagaaagaaagattatatgagttatttct	Protospacer
...*  **.************ *********. ..

283. spacer 3.42|679670|35|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.686

gaaagcgaaaaagaaagattagatgagttatcatc	CRISPR spacer
aggatggagaaagaaagattatatgagttatttct	Protospacer
...*  **.************ *********. ..

284. spacer 3.79|682084|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_014535 (Gloeothece verrucosa PCC 7822 plasmid Cy782206, complete sequence) position: , mismatch: 11, identity: 0.676

gacaaatattcagttaatttatataagtttttaa	CRISPR spacer
ataccatattgagttaatttatctaagttatctg	Protospacer
.    ***** *********** ****** *. .

285. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 12, identity: 0.647

attacattttctaaataaataaaataaataaaag	CRISPR spacer
taggtgacttctaaatatataaaataagtaaaga	Protospacer
   ... .********* *********.****..

286. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 12, identity: 0.647

attacattttctaaataaataaaataaataaaag	CRISPR spacer
taggtgacttctaaatatataaaataagtaaaga	Protospacer
   ... .********* *********.****..

287. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 12, identity: 0.647

attacattttctaaataaataaaataaataaaag	CRISPR spacer
taggtgacttctaaatatataaaataagtaaaga	Protospacer
   ... .********* *********.****..

288. spacer 3.18|678095|34|NZ_CP013238|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018322 (Alteromonas macleodii strain Te101 plasmid pTE101a, complete sequence) position: , mismatch: 12, identity: 0.647

attacattttctaaataaataaaataaataaaag	CRISPR spacer
taggtgacttctaaatatataaaataagtaaaga	Protospacer
   ... .********* *********.****..

289. spacer 3.80|682148|35|NZ_CP013238|CRISPRCasFinder,CRT matches to AP013382 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S45-C13) position: , mismatch: 12, identity: 0.657

gatgatgataataatgatgatgataagctatttaa---	CRISPR spacer
---gatgatgatgatgatgatgatgatacaatcgaccc	Protospacer
   ******.**.***********.*  .* *..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 3246

Clostridioides_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981576.1\|459_1737_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002581383.1\|1825_2290_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_003408282.1\|2577_3246_+	serine/threonine protein phosphatase	A0A2R2ZH50	Clostridioides_phage	1.4e-48	44.1

DBSCAN-SWA_2

10289 : 23545

Clostridium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981581.1\|10289_11201_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	6.6e-09	23.3
WP_071981582.1\|13041_14667_-	recombinase family protein	A0A1L2BY67	Clostridium_phage	4.8e-95	39.1
WP_071981583.1\|14676_14907_-	helix-turn-helix transcriptional regulator	A0A0A7RWZ4	Clostridium_phage	2.0e-07	48.6
WP_071981584.1\|15271_15586_-	helix-turn-helix transcriptional regulator	A0A142LP08	Marinitoga_camini_virus	1.9e-08	39.0
WP_071981585.1\|15826_16027_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_158021611.1\|16064_16208_+	hypothetical protein	NA	NA	NA	NA
WP_071981586.1\|16266_16449_+	hypothetical protein	NA	NA	NA	NA
WP_071981587.1\|16441_16627_+	hypothetical protein	NA	NA	NA	NA
WP_158021612.1\|16629_16797_+	hypothetical protein	NA	NA	NA	NA
WP_071981588.1\|16809_19089_+	AAA family ATPase	D7RWF8	Brochothrix_phage	4.9e-77	32.3
WP_071981589.1\|19118_19850_+	hypothetical protein	A0A2I7RZ22	Vibrio_phage	3.2e-46	45.0
WP_071981590.1\|19846_20539_+	MBL fold metallo-hydrolase	A0A1L2JY21	Aeribacillus_phage	1.9e-56	49.1
WP_158021613.1\|20535_20703_+	hypothetical protein	NA	NA	NA	NA
WP_081366044.1\|20944_21109_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_071981591.1\|21190_21964_+	hypothetical protein	NA	NA	NA	NA
WP_071981592.1\|21967_22225_+	hypothetical protein	NA	NA	NA	NA
WP_071981593.1\|22237_23545_+	replicative DNA helicase	O80281	Escherichia_phage	2.2e-66	36.5

DBSCAN-SWA_3

27552 : 41859

Clostridium_phage(29.41%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981600.1\|27552_27711_+	DUF3797 domain-containing protein	A0A0K2CZU3	Paenibacillus_phage	5.3e-07	51.2
WP_071981601.1\|27740_28121_+	hypothetical protein	NA	NA	NA	NA
WP_071981602.1\|28149_28374_+	hypothetical protein	NA	NA	NA	NA
WP_071981603.1\|28389_29214_+	thymidylate synthase	U5J9N5	Bacillus_phage	8.5e-64	45.4
WP_071981604.1\|29229_29727_+	hypothetical protein	A0A2K9V425	Faecalibacterium_phage	2.5e-34	48.4
WP_081366046.1\|30037_30436_+	hypothetical protein	A0A2K9V4F4	Staphylococcus_phage	5.6e-29	50.0
WP_071981605.1\|30428_30806_+	HNH endonuclease	NA	NA	NA	NA
WP_071981606.1\|30823_31162_+	hypothetical protein	NA	NA	NA	NA
WP_071981607.1\|31229_32009_+	hypothetical protein	NA	NA	NA	NA
WP_071981608.1\|32039_32240_+	hypothetical protein	NA	NA	NA	NA
WP_071981609.1\|32277_33219_+	DNA cytosine methyltransferase	H7BVD3	unidentified_phage	8.1e-111	63.5
WP_071981610.1\|33199_33805_+	hypothetical protein	A0A2H4J8I2	uncultured_Caudovirales_phage	9.1e-31	39.4
WP_071981611.1\|33797_34004_+	hypothetical protein	A0A172Q0F9	Acinetobacter_phage	5.3e-07	42.2
WP_071981612.1\|34023_34251_+	hypothetical protein	NA	NA	NA	NA
WP_071981613.1\|34258_34510_+	hypothetical protein	NA	NA	NA	NA
WP_158021616.1\|34618_34789_+	hypothetical protein	NA	NA	NA	NA
WP_071981614.1\|34789_35437_+	hypothetical protein	X5JAJ8	Clostridium_phage	8.3e-14	29.0
WP_071981615.1\|35436_35838_+	replication terminator protein	A0A0A7RUF3	Clostridium_phage	7.6e-34	57.9
WP_071981616.1\|35853_36567_+	hypothetical protein	A0A0A7RUC6	Clostridium_phage	3.7e-63	53.2
WP_071981617.1\|36607_37042_+	single-stranded DNA-binding protein	A0A290GHL8	Caldibacillus_phage	4.2e-30	51.4
WP_071981618.1\|37048_37315_+	hypothetical protein	NA	NA	NA	NA
WP_071981619.1\|37324_37612_+	hypothetical protein	NA	NA	NA	NA
WP_071981620.1\|37690_38566_+	hypothetical protein	NA	NA	NA	NA
WP_071981621.1\|38615_39320_+	hypothetical protein	L0P6F5	Lactobacillus_phage	4.8e-23	35.0
WP_071981622.1\|39335_39563_+	hypothetical protein	A0A2H4JB60	uncultured_Caudovirales_phage	1.4e-13	51.4
WP_071981623.1\|39559_40204_+	HNH endonuclease	A0A2H4JIA5	uncultured_Caudovirales_phage	2.1e-25	33.7
WP_071981624.1\|40193_40856_+	SAM-dependent DNA methyltransferase	A0A2K9V411	Faecalibacterium_phage	2.6e-31	35.9
WP_071981625.1\|40945_41491_+	hypothetical protein	A0A0A7RVS1	Clostridium_phage	2.0e-13	29.0
WP_071981626.1\|41601_41859_+	hypothetical protein	Q8SBL2	Clostridium_phage	1.9e-09	45.9

DBSCAN-SWA_4

45484 : 80982

Acinetobacter_phage(20.0%)

head,transposase,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981636.1\|45484_46471_+\|portal	phage portal protein	E5DV49	Deep-sea_thermophilic_phage	6.6e-47	39.9
WP_071981637.1\|46460_47735_+\|terminase	PBSX family phage terminase large subunit	A0A2H4J4X1	uncultured_Caudovirales_phage	7.8e-133	54.2
WP_071981638.1\|47833_49456_+	DUF1073 domain-containing protein	A0A0P0I486	Acinetobacter_phage	4.1e-70	33.6
WP_158021618.1\|49367_50141_+\|head	phage head morphogenesis protein	A0A2H4J8F5	uncultured_Caudovirales_phage	4.3e-17	29.4
WP_071981640.1\|50237_51005_+	hypothetical protein	NA	NA	NA	NA
WP_071981641.1\|51233_51905_+	hypothetical protein	A0A0A7RUE5	Clostridium_phage	4.1e-40	45.6
WP_071981642.1\|51954_52398_+	hypothetical protein	NA	NA	NA	NA
WP_071981643.1\|52452_53796_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.0e-25	31.6
WP_071981644.1\|53795_54293_+	hypothetical protein	A0A0P0I8F3	Acinetobacter_phage	2.3e-11	38.2
WP_071981645.1\|54309_55311_+	DUF2184 domain-containing protein	A0A0N7IRF2	Acinetobacter_phage	3.8e-34	31.9
WP_071981646.1\|55395_55707_+	hypothetical protein	NA	NA	NA	NA
WP_071981647.1\|55715_56195_+	DUF4054 domain-containing protein	A0A0P0IKR4	Acinetobacter_phage	1.0e-13	36.0
WP_071981648.1\|56208_56817_+	hypothetical protein	A0A2H4J488	uncultured_Caudovirales_phage	1.4e-07	27.2
WP_071981649.1\|56809_57172_+	hypothetical protein	NA	NA	NA	NA
WP_071981950.1\|57238_57736_+	hypothetical protein	NA	NA	NA	NA
WP_071981650.1\|57746_60578_+	glycoside hydrolase family 2	L0N6M2	Herpes_simplex_virus	8.1e-13	23.3
WP_071981651.1\|60646_61648_+	acyltransferase family protein	NA	NA	NA	NA
WP_071981652.1\|61767_62859_+	DUF3383 family protein	A0A0M4RD26	Salmonella_phage	1.4e-42	33.9
WP_071981653.1\|62870_63302_+	DUF3277 family protein	A0A0P0IKY2	Acinetobacter_phage	2.0e-08	31.2
WP_071981654.1\|63312_63750_+	hypothetical protein	NA	NA	NA	NA
WP_158021619.1\|63794_63938_+	hypothetical protein	NA	NA	NA	NA
WP_071981655.1\|63938_65672_+	hypothetical protein	NA	NA	NA	NA
WP_071981656.1\|65683_66229_+	hypothetical protein	L7TN02	Rhizobium_phage	1.2e-05	25.5
WP_071981657.1\|66242_66572_+	hypothetical protein	NA	NA	NA	NA
WP_071981658.1\|66601_67249_+	hypothetical protein	A0A1B0T6I6	Pelagibaca_phage	8.0e-09	31.2
WP_071981659.1\|67261_68623_+	hypothetical protein	A9YX04	Burkholderia_phage	1.2e-25	36.1
WP_081366049.1\|68622_69216_+	hypothetical protein	D0UIH7	Aggregatibacter_phage	2.8e-24	35.8
WP_071981660.1\|69331_69694_+	hypothetical protein	A9YX11	Burkholderia_phage	1.5e-12	36.8
WP_071981661.1\|69708_70875_+	hypothetical protein	A9YX12	Burkholderia_phage	4.0e-59	37.2
WP_071981662.1\|70881_71607_+	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	1.5e-16	31.9
WP_071981663.1\|71620_72742_+	hypothetical protein	NA	NA	NA	NA
WP_071981664.1\|72743_73493_+	hypothetical protein	NA	NA	NA	NA
WP_071981665.1\|73507_74236_+	hypothetical protein	A0A0C5AEQ0	Bacteriophage	3.2e-14	31.5
WP_071981666.1\|74248_75580_+	hypothetical protein	A0A2K9VH60	Faecalibacterium_phage	7.3e-49	36.1
WP_071981667.1\|75579_75768_+	hypothetical protein	NA	NA	NA	NA
WP_158021620.1\|75757_75928_+	hypothetical protein	NA	NA	NA	NA
WP_081366050.1\|75927_76821_+	hypothetical protein	NA	NA	NA	NA
WP_071981668.1\|76841_77072_+	hypothetical protein	F8UBN4	Clostridium_phage	3.7e-09	48.4
WP_071981669.1\|77134_77293_-	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA
WP_071981670.1\|77391_78507_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	D2XQ03	Bacillus_virus	2.5e-135	65.5
WP_071981672.1\|78990_79665_-	hypothetical protein	NA	NA	NA	NA
WP_071981673.1\|79836_80259_-	hypothetical protein	NA	NA	NA	NA
WP_071981674.1\|80286_80982_-	hypothetical protein	Q331V6	Clostridium_botulinum_C_phage	5.4e-35	41.2

DBSCAN-SWA_5

100583 : 101009

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981689.1\|100583_101009_+	N-acetyltransferase	A0A1X9I6I8	Streptococcus_phage	9.2e-22	37.3

DBSCAN-SWA_6

113695 : 117770

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002581423.1\|113695_115015_+	purine permease	Q9KX94	Enterobacteria_phage	7.3e-33	31.2
WP_003412512.1\|115241_115799_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_002581426.1\|115791_116472_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-39	41.4
WP_071981698.1\|116468_117770_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.9e-17	27.4

DBSCAN-SWA_7

132423 : 140603

Pectobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981706.1\|132423_133596_+	toxic anion resistance protein	A0A1L2CV51	Pectobacterium_phage	9.1e-19	26.5
WP_071981707.1\|133726_135736_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.1e-07	42.2
WP_003412507.1\|136158_136653_+	hypothetical protein	NA	NA	NA	NA
WP_071981708.1\|136680_137061_+	VOC family protein	NA	NA	NA	NA
WP_003412503.1\|137166_137727_-	hypothetical protein	NA	NA	NA	NA
WP_002581454.1\|138599_139571_+	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	9.5e-14	31.4
WP_003412522.1\|139658_140603_-	2-hydroxyacid dehydrogenase	M1HMI7	Paramecium_bursaria_Chlorella_virus	2.8e-34	33.2

DBSCAN-SWA_8

153084 : 159420

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003407528.1\|153084_153924_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	3.3e-15	38.0
WP_002581472.1\|154064_154652_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002581473.1\|154853_155723_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	6.1e-12	35.5
WP_071981713.1\|155795_157697_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.4e-45	26.0
WP_002581475.1\|157683_159420_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.6e-41	25.7

DBSCAN-SWA_9

172196 : 184823

Moumouvirus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070779739.1\|172196_173378_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2P1ELT3	Moumouvirus	3.2e-40	33.0
WP_071981718.1\|173534_174695_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_071981719.1\|175422_176601_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	3.6e-15	23.6
WP_002581487.1\|176839_177268_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_035761245.1\|177497_177956_+	DUF2798 domain-containing protein	NA	NA	NA	NA
WP_002581488.1\|178052_178691_-	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_002581489.1\|178863_179667_-	gluconate 5-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	1.1e-20	30.5
WP_002581490.1\|179824_180679_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_071981720.1\|180990_182703_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.1e-17	35.1
WP_002581492.1\|182859_183354_+	CYTH domain-containing protein	J7I4X5	Stenotrophomonas_phage	7.5e-07	28.8
WP_002581493.1\|183451_184117_-	HAD family phosphatase	M1H9H9	Acanthocystis_turfacea_Chlorella_virus	2.0e-10	28.6
WP_003431974.1\|184319_184823_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	1.3e-17	33.5

DBSCAN-SWA_10

195552 : 200078

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981725.1\|195552_196272_-	protein kinase	A0A1V0SDQ4	Indivirus	8.6e-12	31.6
WP_071981726.1\|196302_197055_-	hypothetical protein	NA	NA	NA	NA
WP_003431833.1\|197301_197919_+	hypothetical protein	NA	NA	NA	NA
WP_071981727.1\|198113_200078_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	3.6e-20	27.1

DBSCAN-SWA_11

204386 : 205199

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981729.1\|204386_205199_+	exonuclease domain-containing protein	G3MBN3	Bacillus_virus	3.6e-14	28.9

DBSCAN-SWA_12

214890 : 216069

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981955.1\|214890_216069_-	class I SAM-dependent methyltransferase	A0A2K9L4K8	Tupanvirus	3.2e-56	38.4

DBSCAN-SWA_13

221135 : 222176

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981734.1\|221135_222176_-	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.3e-13	25.2

DBSCAN-SWA_14

233002 : 234580

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003413037.1\|233002_233764_-	ABC transporter ATP-binding protein	F2Y302	Organic_Lake_phycodnavirus	1.4e-07	29.0
WP_071981738.1\|233776_234580_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.9e-13	27.4

DBSCAN-SWA_15

239322 : 245371

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003413010.1\|239322_239862_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.4e-22	39.6
WP_071981740.1\|240122_240749_+	HD-GYP domain-containing protein	NA	NA	NA	NA
WP_003413379.1\|240855_241821_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003407873.1\|241834_243577_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-41	28.4
WP_071981741.1\|243583_245371_-	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	3.2e-23	34.4

DBSCAN-SWA_16

262657 : 263809

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981747.1\|262657_263809_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.5e-26	34.0

DBSCAN-SWA_17

267974 : 273899

Tetraselmis_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003413596.1\|267974_268226_-	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	3.5e-05	37.9
WP_003413141.1\|268430_270662_+	flotillin family protein	NA	NA	NA	NA
WP_002581580.1\|270886_271681_-	pyruvate formate lyase-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.2e-24	31.1
WP_003413287.1\|271646_273899_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	2.1e-173	42.0

DBSCAN-SWA_18

282590 : 289508

Vibrio_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003413210.1\|282590_284000_-	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	1.4e-05	37.8
WP_003413304.1\|284020_284788_-	carbohydrate deacetylase	NA	NA	NA	NA
WP_071981750.1\|284969_285674_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_071981751.1\|285838_287680_-	peptidase M56	A0A1X9I9K5	Staphylococcus_phage	6.2e-06	24.2
WP_003413094.1\|287846_288221_-	transcriptional regulator	X5JAW5	Clostridium_phage	3.8e-19	42.1
WP_081366052.1\|288358_288676_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_035765091.1\|288827_289508_-	fructose-6-phosphate aldolase	E3SNX1	Prochlorococcus_phage	2.4e-32	35.0

DBSCAN-SWA_19

295545 : 300225

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981757.1\|295545_300225_-	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	1.7e-76	23.0

DBSCAN-SWA_20

309414 : 311076

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981764.1\|309414_311076_-	FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	2.3e-55	37.9

DBSCAN-SWA_21

314324 : 316688

Klebsiella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981765.1\|314324_316688_-	glycyl radical protein	A0A0K1Y4R2	Klebsiella_phage	6.8e-05	47.2

DBSCAN-SWA_22

324201 : 325659

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981769.1\|324201_325659_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.7e-27	25.2

DBSCAN-SWA_23

342213 : 346178

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002581641.1\|342213_343263_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	1.5e-12	34.2
WP_071981777.1\|343342_343756_+	TOBE domain-containing protein	NA	NA	NA	NA
WP_002581646.1\|344885_346178_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	3.9e-148	63.0

DBSCAN-SWA_24

351251 : 357796

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981782.1\|351251_353036_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.0e-51	30.1
WP_071981783.1\|353036_354791_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.6e-51	29.6
WP_071981784.1\|354920_355775_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003431214.1\|355966_357796_-	glycosyltransferase	A0A1V0SAH6	Catovirus	1.3e-16	28.8

DBSCAN-SWA_25

362586 : 392825

Tupanvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981789.1\|362586_363843_-	phosphoribosylaminoimidazolecarboxamide formyltransferase	Q58MG4	Prochlorococcus_phage	8.5e-23	24.7
WP_071981790.1\|364036_365662_-	ABC transporter permease	NA	NA	NA	NA
WP_071981791.1\|365670_366444_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.3e-25	31.6
WP_071981792.1\|366846_367260_-	peptide deformylase	A0A142EZU8	Stenotrophomonas_phage	4.5e-05	35.1
WP_071981793.1\|367456_367681_-	hypothetical protein	NA	NA	NA	NA
WP_081366054.1\|368087_369458_-	MATE family efflux transporter	NA	NA	NA	NA
WP_071981794.1\|369591_371343_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.7e-35	25.5
WP_071981795.1\|371336_373133_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.4e-34	26.8
WP_003412009.1\|373427_374399_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003412034.1\|374592_375975_-	ABC transporter ATP-binding protein	A0A1V0SKJ1	Klosneuvirus	2.2e-16	23.1
WP_071981796.1\|375971_376667_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_003412056.1\|376669_377272_-	MptD family putative ECF transporter S component	NA	NA	NA	NA
WP_071981797.1\|377450_378212_-	thioesterase	NA	NA	NA	NA
WP_071981798.1\|378307_386134_-	hybrid non-ribosomal peptide synthetase/type I polyketide synthase	A0A2K9KZV5	Tupanvirus	1.9e-48	26.3
WP_071981799.1\|386126_388397_-	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	2.5e-12	23.2
WP_081366060.1\|388451_392825_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	3.3e-53	27.6

DBSCAN-SWA_26

396209 : 399728

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981801.1\|396209_399728_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.3e-47	27.1

DBSCAN-SWA_27

404824 : 411073

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003412018.1\|404824_406900_-	PAS domain-containing sensor histidine kinase	A0A1V0SGX0	Hokovirus	4.0e-17	30.3
WP_071981803.1\|407050_407992_-	flavodoxin family protein	NA	NA	NA	NA
WP_071981804.1\|408324_410442_+	anaerobic ribonucleoside-triphosphate reductase	K4F9T2	Cronobacter_phage	1.8e-129	39.8
WP_043666355.1\|410575_411073_+	anaerobic ribonucleoside-triphosphate reductase activating protein	L7TIP4	Escherichia_phage	2.9e-35	44.7

DBSCAN-SWA_28

414450 : 418645

Prochlorococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027634847.1\|414450_415098_-	fructose-6-phosphate aldolase	E3SNX1	Prochlorococcus_phage	6.5e-51	50.9
WP_027634848.1\|415148_416057_-	ribose ABC transporter substrate-binding protein RbsB	C6ZCU4	Enterobacteria_phage	6.2e-07	25.7
WP_002581696.1\|416183_417116_-	ribose ABC transporter permease	NA	NA	NA	NA
WP_002581697.1\|417136_418645_-	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.5e-13	27.8

DBSCAN-SWA_29

427163 : 431021

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027634854.1\|427163_428255_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.5e-23	25.6
WP_027634855.1\|428247_428940_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.1e-40	37.7
WP_071981808.1\|429044_431021_-	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	4.6e-07	25.9

DBSCAN-SWA_30

437888 : 440990

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981810.1\|437888_440990_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.4e-90	26.4

DBSCAN-SWA_31

447877 : 450794

Pandoravirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024041335.1\|447877_449224_-	FAD-binding oxidoreductase	A0A0B5JBT9	Pandoravirus	5.3e-31	25.1
WP_085950977.1\|449498_450794_-	uracil permease	Q9KX94	Enterobacteria_phage	1.8e-68	39.4

DBSCAN-SWA_32

455012 : 458586

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981814.1\|455012_456854_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-44	27.9
WP_071981815.1\|456858_458586_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.4e-39	25.5

DBSCAN-SWA_33

462639 : 464658

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981818.1\|462639_464658_-	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	4.1e-67	35.8

DBSCAN-SWA_34

475120 : 476821

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003411380.1\|475120_476821_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	6.6e-18	29.3

DBSCAN-SWA_35

480492 : 482403

Tupanvirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981820.1\|480492_482403_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.4e-149	42.2

DBSCAN-SWA_36

488203 : 489178

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003411305.1\|488203_489178_+	AAA family ATPase	J9QE36	Clostridium_phage	1.6e-13	26.9

DBSCAN-SWA_37

496965 : 497889

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003430651.1\|496965_497889_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.6e-23	29.4

DBSCAN-SWA_38

502005 : 507097

Canarypox_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003411324.1\|502005_502848_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	7.2e-18	31.7
WP_002581761.1\|503417_504164_+	energy-coupling factor ABC transporter permease	NA	NA	NA	NA
WP_002581762.1\|504165_504480_+	energy-coupling factor ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003411462.1\|505096_505573_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	7.9e-30	43.3
WP_003411453.1\|505627_506173_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	9.1e-22	31.5
WP_003411464.1\|506233_507097_+	NAD(P)/FAD-dependent oxidoreductase	A0A2I2L5E1	Orpheovirus	7.2e-21	28.5

DBSCAN-SWA_39

510887 : 511088

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002581771.1\|510887_511088_+	alpha/beta-type small acid-soluble spore protein	G3MAF8	Bacillus_virus	7.4e-06	42.6

DBSCAN-SWA_40

518842 : 522985

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027634910.1\|518842_519820_+	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	5.1e-07	23.1
WP_003413601.1\|520005_521439_+	PTS sucrose transporter subunit IIBC	NA	NA	NA	NA
WP_003411621.1\|521506_522985_+	sucrose-6-phosphate hydrolase	F8WPR5	Bacillus_phage	1.3e-33	30.1

DBSCAN-SWA_41

528399 : 540057

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981829.1\|528399_530133_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	9.7e-09	22.9
WP_002581784.1\|530357_531212_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003411650.1\|531279_531960_+	ribose 5-phosphate isomerase A	NA	NA	NA	NA
WP_071981962.1\|531970_532804_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.8e-61	46.0
WP_071981830.1\|532910_533471_-	hypothetical protein	NA	NA	NA	NA
WP_035765284.1\|533570_534992_-	HAMP domain-containing histidine kinase	A0A2K9L5I4	Tupanvirus	7.2e-18	26.9
WP_003411629.1\|534994_535666_-	response regulator transcription factor	W8CYM9	Bacillus_phage	9.1e-40	38.6
WP_071981831.1\|535876_537823_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_071981832.1\|537952_538642_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.6e-47	41.3
WP_003411529.1\|538638_540057_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.5e-23	29.4

DBSCAN-SWA_42

543656 : 544586

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003411531.1\|543656_544586_+	exonuclease	G3MBN3	Bacillus_virus	4.1e-14	25.3

DBSCAN-SWA_43

549325 : 553744

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981835.1\|549325_553744_+	DNA polymerase III subunit alpha	A0A0A7RWA3	Clostridium_phage	3.1e-27	33.6

DBSCAN-SWA_44

561519 : 562167

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003411556.1\|561519_562167_+	fructose-6-phosphate aldolase	E3SNX1	Prochlorococcus_phage	1.7e-51	51.4

DBSCAN-SWA_45

569876 : 570986

Pacmanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003411550.1\|569876_570986_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	3.9e-19	26.4

DBSCAN-SWA_46

577003 : 580570

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981841.1\|577003_578719_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.8e-47	28.9
WP_071981842.1\|578722_580570_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.4e-52	29.9

DBSCAN-SWA_47

587463 : 593605

Feldmannia_species_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981846.1\|587463_588138_+	response regulator	B5LWA6	Feldmannia_species_virus	1.7e-06	30.6
WP_071981847.1\|588533_589745_+	MFS transporter	NA	NA	NA	NA
WP_071981848.1\|589834_591592_-	ABC-F family ATP-binding cassette domain-containing protein	A0A1V0SKJ1	Klosneuvirus	1.6e-35	26.3
WP_058372196.1\|591855_592341_+	flavodoxin	NA	NA	NA	NA
WP_071981849.1\|592855_593605_+	nickel pincer cofactor biosynthesis protein LarB	A0A288TYA6	Enterococcus_phage	1.4e-20	42.7

DBSCAN-SWA_48

597599 : 598325

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981853.1\|597599_598325_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.4e-09	31.6

DBSCAN-SWA_49

602111 : 604247

Bacillus_thuringiensis_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033127319.1\|602111_602732_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	3.0e-37	40.9
WP_045144977.1\|603062_604247_+	DNA cytosine methyltransferase	M1PSQ0	Streptococcus_phage	1.4e-54	36.1

DBSCAN-SWA_50

612307 : 617400

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045144988.1\|612307_613897_+	recombinase family protein	A0A0A7RTP8	Clostridium_phage	2.1e-87	39.0
WP_045144990.1\|614034_614745_+	hypothetical protein	NA	NA	NA	NA
WP_045144991.1\|614737_616417_+	hypothetical protein	NA	NA	NA	NA
WP_003411613.1\|616762_617008_+	hypothetical protein	A0A0A8WF72	Clostridium_phage	4.2e-19	53.1
WP_003413204.1\|617007_617400_+	hypothetical protein	A0A0A8WIU2	Clostridium_phage	6.3e-33	55.7

DBSCAN-SWA_51

642444 : 643233

Organic_Lake_phycodnavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981866.1\|642444_643233_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	8.3e-16	32.4

DBSCAN-SWA_52

648150 : 651463

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981872.1\|648150_649932_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.3e-21	28.4
WP_071981873.1\|649921_651463_-	response regulator	Q6XM27	Feldmannia_irregularis_virus	2.0e-05	30.0

DBSCAN-SWA_53

661002 : 665113

Clostridioides_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981879.1\|661002_661713_+	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	7.4e-32	37.9
WP_003413695.1\|661724_663035_+	sensor histidine kinase	X5JAC0	Clostridium_phage	1.9e-12	26.1
WP_003413380.1\|663143_664121_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003413578.1\|664777_665113_-	YnfA family protein	A0A2H4JF35	uncultured_Caudovirales_phage	2.8e-13	40.2

DBSCAN-SWA_54

700899 : 702483

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981889.1\|700899_702483_+	DHA2 family efflux MFS transporter permease subunit	A0A0M3UL24	Mycobacterium_phage	4.1e-14	21.9

DBSCAN-SWA_55

713064 : 722145

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981895.1\|713064_714537_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.3e-14	34.1
WP_071981896.1\|714621_715326_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.4e-35	34.2
WP_071981897.1\|715309_716911_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.0e-20	28.3
WP_003413182.1\|717428_719246_+	sensor histidine kinase	X5JAC0	Clostridium_phage	1.7e-27	28.3
WP_071981898.1\|719306_720038_+	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	6.5e-15	29.1
WP_071981899.1\|720474_722145_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.7e-08	21.6

DBSCAN-SWA_56

730624 : 736200

Bacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003413374.1\|730624_731737_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-26	32.2
WP_071981904.1\|731763_732564_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_071981905.1\|732740_734465_+	ABC transporter ATP-binding protein	F2Y302	Organic_Lake_phycodnavirus	1.9e-17	31.1
WP_071981906.1\|734478_736200_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.0e-51	28.4

DBSCAN-SWA_57

746599 : 766013

Acinetobacter_phage(44.44%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981914.1\|746599_748729_+	xanthine dehydrogenase family protein	A0A0P0I429	Acinetobacter_phage	2.0e-72	29.1
WP_071981915.1\|748721_749198_+	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	7.7e-17	35.2
WP_071981916.1\|749191_750055_+	molybdopterin dehydrogenase	A0A0P0IVM8	Acinetobacter_phage	1.3e-25	31.7
WP_071981917.1\|750171_752964_+	molybdopterin-dependent oxidoreductase	A0A0P0I429	Acinetobacter_phage	6.0e-53	26.7
WP_003413150.1\|753141_753363_-	DUF4318 domain-containing protein	NA	NA	NA	NA
WP_003413398.1\|753804_754830_+	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	6.1e-27	26.7
WP_081366061.1\|755626_758827_+	family 16 glycosylhydrolase	M1HYC6	Paramecium_bursaria_Chlorella_virus	1.9e-34	35.7
WP_003413515.1\|759144_760044_+	ROK family protein	NA	NA	NA	NA
WP_071981918.1\|760096_761536_+	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	1.6e-49	30.3
WP_003413329.1\|761595_761898_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_071981919.1\|761928_763269_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002581325.1\|763299_763611_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_071981920.1\|763762_764812_+	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	9.6e-28	26.5
WP_071981921.1\|764966_766013_-	ATP-binding cassette domain-containing protein	A0A1V0SBM3	Catovirus	2.5e-12	31.2

DBSCAN-SWA_58

769453 : 777152

Clostridioides_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981923.1\|769453_769930_+	nitroreductase family protein	A0A1V0E011	Clostridioides_phage	4.3e-28	42.6
WP_003406134.1\|770180_771764_-\|transposase	IS1182-like element ISClbu1 family transposase	Q9MBP7	Staphylococcus_prophage	4.2e-59	31.3
WP_002581333.1\|771977_772643_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_071981924.1\|772623_773301_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003413347.1\|773460_774210_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-30	37.8
WP_002581336.1\|774337_775198_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003413691.1\|775373_777152_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.3e-10	38.7

DBSCAN-SWA_59

782784 : 783468

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003413449.1\|782784_783468_+	response regulator transcription factor	A0A1V0SGR9	Hokovirus	1.1e-05	30.3

DBSCAN-SWA_60

794665 : 796204

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981934.1\|794665_796204_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.1e-19	31.7

DBSCAN-SWA_61

802988 : 804553

Paenibacillus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104675536.1\|802988_803918_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.2e-101	77.3
WP_003407063.1\|803875_804553_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.7e-63	56.3

DBSCAN-SWA_62

813573 : 814410

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071981945.1\|813573_814410_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.5e-39	36.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP013239

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013239_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013239_1

811938-812023

Orphan

Consensus_repeat	Method
AGGAGCTATGAAGACTGGTTGGATTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013239_1

>merge|NZ_CP013239|1|811938-812023|CRISPRCasFinder
AGGAGCTATGAAGACTGGTTGGATTCAAGATAATGGAACTTGGTACTACTTAAATGCATCAGGAGCTATGAAGACTGGTTGGTTCC

>NZ_CP013239|1|1|811938-812023|CRISPRCasFinder
AGGAGCTATGAAGACTGGTTGGATTC	AAGATAATGGAACTTGGTACTACTTAAATGCATC
AGGAGCTATGAAGACTGGTTGGTTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013239.1\|WP_071982150.1\|798114_799455_+\|collagenolytic-protease	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_003413781.1\|796950_797178_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_003413797.1\|809507_810056_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_071982152.1\|801146_802340_+\|choline-binding-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_003413814.1\|802769_804599_+\|cell-wall-binding-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_003407042.1\|822266_822818_+\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|376414
NZ_CP013239.1\|WP_003413836.1\|812569_814327_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_071982149.1\|794846_796631_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293817
NZ_CP013239.1\|WP_071982154.1\|814592_816161_+\|collagenolytic-protease	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_071982155.1\|816317_818165_-\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|377422
NZ_CP013239.1\|WP_003408407.1\|805151_806864_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_003407104.1\|818462_819884_-\|undecaprenyl-phosphate-glucose-phosphotransferase	unknown	unknown	gnl\|CDD\|274396
NZ_CP013239.1\|WP_003407053.1\|821353_822235_+\|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl\|CDD\|130274
NZ_CP013239.1\|WP_071982156.1\|822844_823864_+\|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224013
NZ_CP013239.1\|WP_071982151.1\|799850_801050_+\|PspC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_071982148.1\|792705_794436_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP013239.1\|WP_003413749.1\|807436_809317_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_003407084.1\|823838_824792_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133039
NZ_CP013239.1\|WP_071982157.1\|824823_825993_+\|glycosyl-transferase-family-1	unknown	unknown	gnl\|CDD\|340825
NZ_CP013239.1\|WP_003407073.1\|820015_821149_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340837

Protein	Function_ID	Function_description	E-value
NZ_CP013239.1\|WP_071982150.1\|798114_799455_+\|collagenolytic-protease	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.74876e-32
NZ_CP013239.1\|WP_003407073.1\|820015_821149_-\|glycosyltransferase	gnl\|CDD\|340837	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.	2.1902e-68
NZ_CP013239.1\|WP_003413797.1\|809507_810056_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.58409e-24
NZ_CP013239.1\|WP_071982152.1\|801146_802340_+\|choline-binding-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	8.27678e-26
NZ_CP013239.1\|WP_003413814.1\|802769_804599_+\|cell-wall-binding-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	3.54429e-28
NZ_CP013239.1\|WP_003413836.1\|812569_814327_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	7.14937e-29
NZ_CP013239.1\|WP_071982149.1\|794846_796631_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	9.64757e-38
NZ_CP013239.1\|WP_071982154.1\|814592_816161_+\|collagenolytic-protease	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	3.67851e-27
NZ_CP013239.1\|WP_071982155.1\|816317_818165_-\|O-antigen-ligase-family-protein	gnl\|CDD\|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	7.53274e-06
NZ_CP013239.1\|WP_003408407.1\|805151_806864_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	7.9248e-29
NZ_CP013239.1\|WP_003407104.1\|818462_819884_-\|undecaprenyl-phosphate-glucose-phosphotransferase	gnl\|CDD\|274396	TIGR03023, Sugar_transferase., Undecaprenyl-phosphate glucose phosphotransferase. This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.	4.37067e-168
NZ_CP013239.1\|WP_003407053.1\|821353_822235_+\|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl\|CDD\|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	1.0123e-179
NZ_CP013239.1\|WP_071982156.1\|822844_823864_+\|dTDP-glucose-4,6-dehydratase	gnl\|CDD\|224013	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_CP013239.1\|WP_071982151.1\|799850_801050_+\|PspC-family-transcriptional-regulator	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	6.82335e-23
NZ_CP013239.1\|WP_071982148.1\|792705_794436_+\|PAS-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.58551e-38
NZ_CP013239.1\|WP_003413749.1\|807436_809317_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	8.00303e-25
NZ_CP013239.1\|WP_003407084.1\|823838_824792_+\|glycosyltransferase	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	7.28306e-60
NZ_CP013239.1\|WP_071982157.1\|824823_825993_+\|glycosyl-transferase-family-1	gnl\|CDD\|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	2.93953e-06
NZ_CP013239.1\|WP_003407042.1\|822266_822818_+\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|376414	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase. This family catalyze the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13.	2.70303e-104

>NZ_CP013239.1|WP_003413797.1|809507_810056_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MRKSFNKAATLLLSLAIMNVIFPVNAAEKKQYETNIEIENNKLQVDDEGNTVLELVCDSNSGFVKNNGKTEFYDVSGRQAKSSWINISGKWYYFDLNGIMVTGWQRISNKWYYFLEDGSKVTGWLMDESHWYYLGEDGVMKSSQWVNIDGSWYYFNEKGIMEKDTIIDGFKINSNGISELKL
>NZ_CP013239.1|WP_003413749.1|807436_809317_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MFKRSSKMTALLVAAAAVVSIVPASASERLGTKDGTITNARAYDGGYVYDGYRTDDDDAALYYNNGSKDVNTDEDEDYDTYTLERYGDKYSTVKDGNDEYLLDLSNGKIDNDETLEDKLDNAKNKLKSKLNKEDRYILFKNGTNDFEKDADKFATNENSVKRILSDKYGEVWYQFAAAGDGDAIKRTTGAAVNGKVGYYQGFSNDSGKYIDVTQDCNIYAYDTDKDKTVKIEEYGKTYSTNNLMAQLDSVTPISQDKDNLYVVAKVVISGEKQADTTQYYLQKISKSQGDKKDGGYLPKDTTSYLLNVKMDEYKDADGKSQRLYDDGDSSDAADVIMSYVDGTSFDDGYCKNIEVIDGNVYATLVKDSKIKMFKIKLKKDKLDVTEAVDKKDGSKVKDVDVYTAKKDSDWDHDVVDAATSKDGERYSIDADGNTWILDKGKILKSEGTEFKEMYTCDRSIDKLDVYDENNLIAWSSDGDVYTTVAEGKKQTDEDAGVDTDKKDDTTPVVKAGWDKNADGTWAFYKDGAKVTGWLNDKGTWYYLDAAGTMKTGWVQAGSWYYLNASGAMQTGWVNDNGTWYYCNASGAMQTGWLLDGSTWYYLNANGSMAANTTVDGYVLGANGAML
>NZ_CP013239.1|WP_003408407.1|805151_806864_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MFRRSSKLTAMLVAAAAVVSIVPATAAERLGTKDGNITNAVAFNGGYIYDGYRTDDDDASLYYNNGTKDVEVDADEDYSSYPLYRYGSKYATVVDGTDTNEDDNYLLDLSNGKIDDEESLGDKKTNAENKLKTKISKTDRYNKSKDVSEFNRILNNKYGEVWYQYKANEYSGFTDDAGNYIDVTQTANMYVYNSVKKDAVKFSEYGDTNNDVKLNFKSTKAISQDKDNIYAVTTVTTSAAVEGAKESEPQYFFQKISKAQGDKEDDAYLPKTVASYQIDNGTSYKSDDDRTLAFNLLKDGKDGDYSVVNYEVKNATVYVTGVKKDDKDNITGVKVWALKFKKDKVDASNKDKVDTYIVKKDGDTDNDAVAYSIDANGTTWYLNKGTISKIDGTDKKDVYTCDRSLNALDVYDENNLIAWDTAGDVYTTVSEGKKQTDEDAGVDEDKKDETPVVKAGWDKNADGTWAFYKDGAKATGWLNDKGTWYYLDAAGTMKTGWVQAGAWYYLNASGAMQTGWVNDNGTWYYCNASGAMQTGWLLDGSTWYYLNANGSMAANTTVDGYVLGANGAML
>NZ_CP013239.1|WP_003413814.1|802769_804599_+|cell-wall-binding-protein
MNKRIKKIIALTVAFSAVTTIAPKTFLGLTSKPAYAASYTARNGELTSLVIKSTNGDKLSLKDGYNGDTVKLSDEKEYFVKLTDDSEGIVINAEAKGSDRIVRIFLTDDSDATAYKPGDKLYLGKGNTTVYVRTYASLSDFRQAKDKDKDVSNCEEEYEVNVKKTTGSSYEDTTQDPVYLKGLSLNKGDITFLKQRTSYNIKVASSVNEIKITAEPEDDSSRVRIDGSLVDEDDNYRKTISLDKGKNEIKIKVTDDKDNQRVYTLNITRGSSSDGDSQGDVHLSNLELDEADLEFKEDKTSYEVNVDEDVSKILVTAEPEDEEYLVTINGSEVNSGDEYEKKVSLSKGKNTITVVVQDEVEDTKRTYKITVNRGTVKDDKEDTEDKKDDNSSDNKNGVGWVKVDNDWKYRGEDGKFYVNKWIYDKEQGVYCYLKEDGFRATGWLQEGGNWYLLDSKGAMLTGWQYTGGQWYYLQSSGAMKTGWLKEEKTVTVEDTSTATNKKEEEKTSTSGSTNKTDASKTDDKKEQTTAKTKKVETWYYLQANGTMKTGWLLDNDKWYYMNLSGAMQIGWVIDNNSKYYLDQSGVMATGTKTIDGKEYKFTTSGALIS
>NZ_CP013239.1|WP_071982152.1|801146_802340_+|choline-binding-protein
MNKNLKKVIALTLAVNAIALIEPAKEISIFTETAHAAKYDDPLLSDLKVSGYDVDFDKETYSYSIKVDKDVDQITVTAKPEDSAYEVTVNGDDAKEDDKYKVKVDVKQGKSTITIRVKDENHDLKTTYELEVIRGSASYGEDLNEDDVYLDNITLSAGKINFSSKVTEYTVSVDDSVRYLDIKAKPMDSDEEYVEINGEEAEEDDDYEQTVTLKDGKNKITIRIENSEKSKKYILNVYKGVEPPKKDDSDEDEVKEDSNNNNQNSNNNNNSSQYKNQWVTTQGIWLYYDENGNMMKNQWFNDVNAKKSYFLNENGVMVTGWFQKDGNWYYLNEDGSKHIGWKFVMGLWYYLDGEGVMKTGWIQDANGKWYYLNSNGAMASNTTIGGYKLGADGAWIK
>NZ_CP013239.1|WP_071982151.1|799850_801050_+|PspC-family-transcriptional-regulator
MNKNIKKIIAMTLTLCAVSAVCGVKNLNLSGEGTVAAFASDKSSLNLESISLSTGKIDFSSDVTSYKVYYNKAVKNIDIKVSPEGSDKRIRVTINDESVSSDDSYKKNFKLSVGENVFKIKIENRDDESQSKTYTLKAYRGTDENDQEIEQDLYINYLTINGKEMSLSKDKKVYDYKVDKDVKEAKIVIEPDQKYYTVKIGDNTYEGEESIKKTFTLTEGKNEIKIKLTDGEDEEKKQRTYTLNIYRGVDIPTSSTTTNNNTTNTGNNTGTNNSTSAGTTNTVSNSGKWQQNSAGKWYYVDSNGTAAKNKWFFVQGDGTMATGWVSFGGSWYYLNDDGTMVTEWLNNGGKWYYLGSDGAMKTGWVQLSGNWYYLYSDGSMACNTTIDSYKLGSDGAWIK
>NZ_CP013239.1|WP_071982150.1|798114_799455_+|collagenolytic-protease
MNKNVRHLIAAALVISAFSAVAPANIFNLGVIEANASTYSGASNGQLKSLSVYRSTGKEAQLYSNLAATKETELTSSTDYYIDLKGSDGVELDAEVEGDDYVVKVFKSSDKDAEGYDPSDLGLVPIDSGSTKLYLRTYRSEDDYKDAWDDGNVKKCLKTYTLHISKDNVNSDEEDDVEYPYLSSIYLSDGSINFTKSKTSYKVNVDEDVKQLLVRAKPQDDDDLVEINGDSVDEDGDYEKKVSLDKGENTIEITVENDDETTTYTIVVNRGGKSSDSSNSSDEKDSTNIITGSDSFLYNSGTMNSWVSKNGKYMYMDGTGQPLKNKWWFDVSSASDYYFDKDGYAQTGWAQINGKWYYFDNSGKMQKGWISNDGKWYYLNVSGAMVTGWYQDAGKWYYLNSDGSMKTGWLNDNGSWYLFNSDGSMVTGSVLVDGVQYSFASNGVMI
>NZ_CP013239.1|WP_003413781.1|796950_797178_-|hypothetical-protein
MTHKDKPYLPKVRTDYHPSNSDCQSSTGVGQTTNIPNPASDPIVVNNIASQEFDYTQDLMDINDFSQNSKHTKKY
>NZ_CP013239.1|WP_071982149.1|794846_796631_+|MBL-fold-metallo-hydrolase
MHNIKKLLMTISMTLAFSCSLLSTGAYAVSNKTSSDVSSESTQKTDDKNSTSNSDKNSSKTDKKEDKKNQDSSTIKNEDVVDGEEQDETSTKDDEVIKVEIVPHWENINGKLHYVTKDGIIEEEGWFKEKDENPDADNDNEYYLDENHAAVTGWNKIGGQWYYFNEAGVKQTGWQLINYEWYHLDKNGIMEKGWIKDDGAKYYLSDAGTMVVGKKYIDDKWYLFANDGKLQTGFYTYKGKDYYSDKDGVMVTNQWIKTKNYQYYAKADSSIAKGNIIIDGKLQVFDNNGRFIESEDADNYLFVKYLSVGNADCQFIRLPNGETALIDTGDVTTREQLVNFLNEQKLRKKGGKKLIDYVIITHGHSDHIGGLAAVLDNFEVGKIYMPKNAAMQNWYSGLKVNDEVSQADIDMLKYDYQIYKEAAKAVKDNGLKFINPTPGQYIDSNEILQFVQSGKDFGPIGSQKHMAEYWGINENSAIVYLNYGDFQGLFAADMEWTSEKDFWVSDLLDGKKVDLLKVPHHGYNTSSTGDFLKYVNAPVGIVSRAEDSIDKNTAFNNLVNNGVMLYETSQSKNGGISVYATEDNWSMEDASKDN
>NZ_CP013239.1|WP_071982148.1|792705_794436_+|PAS-domain-containing-protein
MREEDIEIELKDILNSIPYEITIKDLDYNYIYANEKFCKNLNCDFEEIYKKNMSNFWSDKDYEKIREIDKQVIEKNKGIFSERKLRIINDNERWFYMYKSPFNMNNEKYIITISQEVTLNKKMVNLLEDQIENYSLSTYGYYDIFYDTENRDALLDDNYKNKIKSICKNLCEQLESSNINIYLYDEEQNDLNLYISSHDIDTIEKKNINLGNRRFFKFSGVNLTIDYKMLHKLYENKKYNVKIYKIKYGSNIIGIMNVYYDKNQNLNVEDKDLINSICYKFGLLFQNKIITRKLKEEENKKIKYRQALEIENLKTEFFLGLSHEIRTPLNIIITSIHSIDDILKTHECEGYRDRIIKSLNYIKQNSNRMLRLINNISDVKKLDHMCYDVNYTNCNIVEVIEGIVISVSDYIKVSQRNIIFDTEEEEIIIACDLDKIERIMLNLLSNAIKYSDENTDILVKIRLSEKKDEIIVSVWDDGVAIEKKDSIRIFDKFVQLDKLLNRPCEGTGIGLFLVKSLLEIQGGRVWVNNEVIKGAEIDFSLPVRTVEEKEDKHNITTSPQDKVEIYNVEFSDIYSL
>NZ_CP013239.1|WP_003413836.1|812569_814327_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MFNRTSKMTALLVAAAAVTSIVPATAAERLGTKEGTITNAIAFDGAYVYDGYRTDDDDAGLYFNNGKDKMVDEDEDYSYDELAKYGSKYALIKDDEDFLVDLSNGKILDDESVQDKETNTRTKLNTSLKKTDRYGKTDSSDITLERLNKGSFADVWYKYTATTGAGAEYNEGKLYGFTNESAKYVDATHTANMYVYSSVKGATVKVEEFNDEVDYTVSGAKHKVEVQLENLTAIAQDSDYIYAVAEVAVINDGVKDENNQYFVQKISKSQGDKKDGAYLPKSVASYQLGAGSFSADSDSDDLNTVYDLLVGANKADVVTNGVQVKNGNLVITTIEDDKKVVVYTVKLKKTKLDAINNVDNVDTYIAISDSDEDQDIITNGKTRELAVSIDAEGNTWALDKGAIYKFDGSKFKEMYTCDRSLTALDVYNDSNLIAWEEDGDVYTTVNEGKAVTDEEAGKEDDKTEEVVKSGWDKNADGTWSYYNNGAKATGWVQAGAWYYLNANGIMQTGWVNDNGTWYYCNASGAMQTGWLLDGSTWYYLQANGAMKTGWLLDNGTWYYLNANGSMAANTTVDGYKLGANGAWIR
>NZ_CP013239.1|WP_071982154.1|814592_816161_+|collagenolytic-protease
MNKNIKRTVAMALTLSALATIEPASSINILGAQEANAATSDKIYFDSLRVSGAGNIKLSDSKTKYSIYVPKSQESATITIKKDRSSDVISSDSGDVDNSGSTCKIKVDLDEKGSTANEFEVTVKNEDGSKSRTYTLKIYRKNVSSDDDEDNDDIYLDSINLSAGSIDFSRKKAEFDVVVDKGVDSIKIQAKPEDEDYKVEIGGEEVDEDSKWRTSVDLKTGKNVVEIYIEDEDDDDNPQRTYTLNIYRGTKPSSNTATGEVDTKQDEIYVKKLVLNDGDVPVTFDKRITSYDITVNKDLEDIIVKAEPEDNDDLVKINASKADSNYRKRVALNPTGPTTIEIKVYNDYDDDEDDYEERIYNLNIKKAGTTTDSSQNNNNNSSNNNNSTNNNNTNVTPSAKVNQWVKNEYGLWQYNDALGKPLLNQWFKDGANWYYLNEYGIMQTGWIIQGSSWYYLNDAGIMQTGWVNDRGTWYYLNDNGTMKTGWHKDSNGKWYYLNEYGVMLSNVYVDSYRLGADGAMIK
>NZ_CP013239.1|WP_071982155.1|816317_818165_-|O-antigen-ligase-family-protein
MENLKKFCKEKSITFFFPIALVLTIVPLIVRMRISEPDEDTLKLYGSSANSDLFTQNKEICLIFLSAIILIIAITCFKKFYEKKDKLINIMIICSLVFLGFTFLSALFSKYKHVAFWGIYDRSEGFVTIACYILLFIYSIYTFKKTEEFKFILIPILILVYINGFLGLFQFFGSDLIKTSLGGLIAIPSSYNIDPSKLSLAYESGTIYGTLYHYNYVGSFTSLVLPILFGACVIEDDIFLKLLSMGGSLVGLWLLFGSTSRAGIIGFGSIIFFACIFFGKLLLKRKKALLITLACLGVFAVGLNFATSGKIFRRIPSLVADGLSLFKSNTEFNYRDHIPIKNIEHIDNNIVLTLPSDTLTISFENNDYVFRNSKNEIVDYKSEFNSKIKAYDYTTSDANFSNISFRSGKIKSKTKNDGLMLILNGNSSEFMFITRDNNSMHLIDPKTLEEIDLDFPKTIGFNGKEKLASSRGYIWSRSIPLLKDTLILGSGPDTFSFDFPQNDLLGKLYAYDTTNMIISKAHNLFLQIGLNNGVVALIAFIILIMVYIVDSFKLYALKNKYDEKQILGSILALSVIGYLFTGLFNDSVICVAPIFWIILGVGAAVNFINKKSETK
>NZ_CP013239.1|WP_003407104.1|818462_819884_-|undecaprenyl-phosphate-glucose-phosphotransferase
MIRENQNLLNKVNALSDIIILFISITISYFIRFYVFDVKTDYIALNKYLQFMIVIIPINSIIYYFFNLYDSFRTKSFSKEISSIIKANTIIIAVILSTLFAVKLVDLSRLVLVIFYFINTFLIIVKRGFLRKILSNLRKKGLNLKHVLIVGAGETASKYLDVIQHNKTYGYNYAGYISNDSDFYGKKLGDYSQLLDILYKYKFDEVVCALDIKDAEYIEKIVSDCEKSGTKISIIPFCYEYIPSKPYIDQIGTLPLINIRRIPLDNMGNAFMKRTLDILGSLSLILVTSPVMIITALIIKCTSKGPIIFKQERVGLNKSIFTMYKFRSMKVNSKETTGWSTNNDPRKTKFGSFIRKFSIDELPQFFNVLKGDMSLVGPRPELPHFVDEFKDEVPLYMVKHQVKPGITGLAQINGFRGDTSIKKRIEFDIHYIESWSILMDFEILFKTAFKGFKNDEKLIITNKEICQDEYIKK
>NZ_CP013239.1|WP_003407073.1|820015_821149_-|glycosyltransferase
MKKVLFAASTLSHIENFHIPYLKYFKDNDFEIHVIGKENNKMPIPYVNKSISIDFEKNMFSIKNFINAFKICKLVKQENYSVISTHTILASFFTRLGVMMSLKKHPLIINTVHGYLFDENSSLIKKTIMLCAEKFVRPVTDTILVMNSTDYSIAKKYQLYRKNLYSINGMGINSSNFPFCTNQTKTYFRQKYNISENDFILIYVAEFSKRKNQKFLIDSMKKLLNEGYSNIKLYLLGDGILIDEMKSYSKSLSLNNNIIFKGYIKDVSDYYNISDVCVSSSRIEGLPFNIMEAMSTGLPIIASKIKGHIDLVNHNSNGFLYDFNDIDSFCNYVKVLFNDRTLLKNMRNISYELSKNYTLESVYPKITNIIMSEYRNN
>NZ_CP013239.1|WP_003407053.1|821353_822235_+|glucose-1-phosphate-thymidylyltransferase-RfbA
MTKGIILAGGSGTRLYPLTMVTSKQLLPVYDKPMIYYPLSTLMLAGIKDILIISTPQDLPNFERLLGDGSRYGINLSYKVQPSPDGLAQAFILGEDFIGNDNCAMILGDNIFHGNGLTNQLKKAVENKGRATVFGYYVDDPERFGVVEFGKDGKVISIEEKPECPKSNYAVTGLYFYDSKVCEYAKGLKPSVRGELEITDLNKIYLEEKKLDVITLGRGYGWLDTGTVDSLSEASEYVRVIENRQGLKISCIEEISYKNGWIDKETLLESAQTYGKSAYGKHLRNVAENRVIY
>NZ_CP013239.1|WP_003407042.1|822266_822818_+|dTDP-4-dehydrorhamnose-3,5-epimerase
MNLIKTELDGVYIVEPQVFGDERGWFMETYSAIKTPEIACNFVQDNQSYSKGKGILRGIHFQNGEHAQAKLVRCVKGAVLDVAVDLRKGSPTYKKWVAVELSAENKKQLFIPRGFGHGFVTLSDDVEFVYKTDNYYNYENDRSIKFDDPEIGVEWGIKNPILSEKDKKAPLLIDSDCTFVYEK
>NZ_CP013239.1|WP_071982156.1|822844_823864_+|dTDP-glucose-4,6-dehydratase
MKIVVTGGAGFIGGNFVHYMMNKYKDYKIVVVDSLTYAGNMETLDIVKDNANFSFYKIDIADRNAVYEMFEKEIPDIVVNFAAESHVDRSIEDPEIFLKTNIMGTQVLMDACRKYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLLVGAYYRTYGLPATISRCSNNYGPYHFPEKLIPLMIANALNGKKLPVYGTGENVRDWLYVEDHCSAIDLIIHNGRVGEVYNIGGHNERSNLQVVKTIVKELGKGEELITYVGDRKGHDMRYAIDPTKIYNELGWLPTTTFDDGIKRTIKWYLDNKCWWENILSGEYQNYYEKMYGER
>NZ_CP013239.1|WP_003407084.1|823838_824792_+|glycosyltransferase
MKKCMEKDKTLLSEKKIQILMSTYNGEKYLREQLNSILNLDNYNNIKVLIRDDGSTDGTIKILKEYQQNYGFEVHLGENLGVNGSILWLFSNCNDKVEFYALSDQDDVWMPNKFSVLFSALQGNYDENSIYLFSSCSSITNEKLEVIGKSTQPINGACFYNAMIQNICPGHTQVINKKLIDTIKGIDYSKISVIDHWIYLISSALGKVIFTENTTVLHRQHNDNCIGYQINGLSKLLTRIKRLSLKKADQMTVQLLFLLEMYKNVLPEEYKLEIEGFLESSTFNKRIKYIMKAKAFRQSKFENFLFKILFLVGKYHI
>NZ_CP013239.1|WP_071982157.1|824823_825993_+|glycosyl-transferase-family-1
MINILVECPELIASVKVGVLKPLEPFIEKYKCNVIYKRTIDIKTKDICNCDIFITVRGCEFMTLQIVKIASKLNKTIIYYLDDDLLNVPIGPWCPEEYYNQVVKKNLITVMSYCNILWGVNNLICEKYLKYTRDKIWISNRTPMSIERSIEDNGEKLHILYAGSESHSKVLQENLSKVIRALAIKYSEMVDFTFIGANSGINNLNNVKNIPTIKNYDKYKEYVRNNNFSIGIAVIKDEPFFHCKYYNKFLEYTSINCVGIYTNCKPYTYVVKNNENGILCDNTYDEWYKSIEMLIINKKLRDKCLKNAKEYVNEYHNNISTEIHLEQQLKPYLKKSENKKTLKFLPSLKLIYIYSRIYMIYKEFGIFRGSIQIIKKILRKIKKIGEKDV

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Crispr_ID: NZ_CP013239_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013239_2

937493-937578

Orphan

Consensus_repeat	Method
TTTAAATATTATCTTGGGAAAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013239_2

>merge|NZ_CP013239|2|937493-937578|CRISPRCasFinder
TTTAAATATTATCTTGGGAAAGAAATAATCTAAGAAGAATAATAATGAATTTTTAGATTAATATTTAAATATTATCTTGGGAAAGA

>NZ_CP013239|2|2|937493-937578|CRISPRCasFinder
TTTAAATATTATCTTGGGAAAGA	AATAATCTAAGAAGAATAATAATGAATTTTTAGATTAATA
TTTAAATATTATCTTGGGAAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013239.1\|WP_003424001.1\|934006_934636_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223564
NZ_CP013239.1\|WP_071982190.1\|939885_940281_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_070780373.1\|945051_945441_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071982189.1\|937675_939436_-\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|237053
NZ_CP013239.1\|WP_024039349.1\|942422_943160_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP013239.1\|WP_043852473.1\|930562_930889_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_003423897.1\|927049_928462_+\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NZ_CP013239.1\|WP_071982186.1\|929472_930150_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP013239.1\|WP_002579058.1\|940282_940618_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_002579051.1\|932571_932910_+\|P-II-family-nitrogen-regulator	unknown	unknown	gnl\|CDD\|223424
NZ_CP013239.1\|WP_003408009.1\|934779_935907_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050
NZ_CP013239.1\|WP_002579061.1\|945720_947019_+\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP013239.1\|WP_002579062.1\|947190_947514_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376749
NZ_CP013239.1\|WP_058146718.1\|935906_937490_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|270327
NZ_CP013239.1\|WP_070780374.1\|944151_945000_+\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NZ_CP013239.1\|WP_071982188.1\|933147_933870_+\|Spo0E-family-sporulation-regulatory-protein-aspartic-acid-phosphatase	unknown	unknown	gnl\|CDD\|379605
NZ_CP013239.1\|WP_070780375.1\|943518_944091_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071982187.1\|930949_932527_+\|ammonium-transporter	unknown	unknown	gnl\|CDD\|223083
NZ_CP013239.1\|WP_104675536.1\|928585_929515_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP013239.1\|WP_071982191.1\|940698_942126_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|181973

Protein	Function_ID	Function_description	E-value
NZ_CP013239.1\|WP_003424001.1\|934006_934636_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|223564	COG0490, COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism].	6.48455e-21
NZ_CP013239.1\|WP_071982191.1\|940698_942126_+\|6-phospho-beta-glucosidase	gnl\|CDD\|181973	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed.	0
NZ_CP013239.1\|WP_024039349.1\|942422_943160_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.04076e-54
NZ_CP013239.1\|WP_003423897.1\|927049_928462_+\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	0
NZ_CP013239.1\|WP_071982186.1\|929472_930150_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	3.88979e-11
NZ_CP013239.1\|WP_002579051.1\|932571_932910_+\|P-II-family-nitrogen-regulator	gnl\|CDD\|223424	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism].	1.17872e-38
NZ_CP013239.1\|WP_003408009.1\|934779_935907_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	1.18689e-145
NZ_CP013239.1\|WP_002579061.1\|945720_947019_+\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	6.05697e-144
NZ_CP013239.1\|WP_002579062.1\|947190_947514_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	gnl\|CDD\|376749	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIA PTS system enzymes. This family of proteins normally function as a homotrimer, stabilized by a centrally located metal ion. Separation into subunits is thought to occur after phosphorylation.	2.45117e-36
NZ_CP013239.1\|WP_058146718.1\|935906_937490_+\|ABC-transporter-permease-subunit	gnl\|CDD\|270327	cd13609, PBP2_Opu_like_1, Substrate-binding domain of putative ABC-type osmoprotectant uptake system; the type 2 periplasmic-binding protein fold. This group includes the periplasmic substrate-binding component of a putative ABC transport system that is predicted to be involved in uptake of osmoprotectants (also termed compatible solutes) such as betaine, choline, proline betaine, carnitine, and L-proline. The relative substrate preference of this group is not known. To counteract the efflux of water, many microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.19943e-159
NZ_CP013239.1\|WP_070780374.1\|944151_945000_+\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	2.24063e-15
NZ_CP013239.1\|WP_071982188.1\|933147_933870_+\|Spo0E-family-sporulation-regulatory-protein-aspartic-acid-phosphatase	gnl\|CDD\|379605	pfam14417, MEDS, MEDS: MEthanogen/methylotroph, DcmR Sensory domain. MEDS is prototyped by DcmR and is likely to function with the PocR domain in certain organisms in sensing hydrocarbon derivatives. The MEDS domain occurs fused to Histidine Kinase and as stand-alone version. Sequence analysis shows that it is a catalytically inactive version of the P-loop NTPase domain of the RecA superfamily.	7.22167e-22
NZ_CP013239.1\|WP_071982187.1\|930949_932527_+\|ammonium-transporter	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	9.63312e-117
NZ_CP013239.1\|WP_104675536.1\|928585_929515_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.18196e-46
NZ_CP013239.1\|WP_071982189.1\|937675_939436_-\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|237053	PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0

>NZ_CP013239.1|WP_058146718.1|935906_937490_+|ABC-transporter-permease-subunit
MSDFFMNLYLKKSEVISLLLEHIQLTLLAVLIAVVIGVPLGIFITNYKKLAKIVIGFANLVQAIPSLAILGFLIPVVGIGSVPAIIMVVLYSMLPIIKNTYTGISNINPDMIESAKGVGMTNIQILKIVKIPLAMPMIMAGIRISGVTAVGLMTIAAFVGAGGLGYLVFSGIQTVDNNLILFGAIPAAILALIIDYITSKIEYAVMPNGIRKSDGTMKVKRGNKGKNKKNKIIALVTSVILIIILLFSTNVFNKSNNKIVIASKNFTEQIILGNMLEQLIEAKTDIDVETKLNLGGTQVAYSALKSGSVDLYVEYTGTAYVNLLDIKDGNTNPDEVYKKVNEIFKEKENIEFLDPLGFNNTYALVVRKDTAEKYNLKSISDLKKVSEEFLMGPTIEFANREDGLLGLDKAYNINFKKVKPIDGGLRYTALMNNESDVIDAFTTDGLLDKFGLKVLEDDKNFFPPYYAAPLIRMDTLKEHPELEEVLNLLSNKITDEKMRKLNYEVDVNGRDPKVVANEFLVSEGYIN
>NZ_CP013239.1|WP_003408009.1|934779_935907_+|ABC-transporter-ATP-binding-protein
MIEFKNIKKSYKSKIILENFNLSIDSGKLVVLIGASGCGKTTLLKMINRLISITEGEILINGKDINKMDPIKLRRGIGYVIQQTGLFPHMTVKENIEIIPRLMKISERKIEKKTIELLNMVGLDPNEYLYRYPAELSGGQQQRVGVARAFATDAEIILMDEPFSALDPITRTELQEQLFNIQKEYNKTIVFVTHDMDEAINIADMICILKDGKIIQYDTPENILKNPENDYVEEFVGKNKIWAKPEFIKAEDVMINRPATVSIKRSLLQAREIMREKTVDSLLIVDKEGMLLGYVTLSDIQKIDNKSILVGEVMRRSPEYVTEDTNLLDLLEKFTGLKRGYLPVCNENGKLMGLVTRSTLISVLSSQYIDIGGDN
>NZ_CP013239.1|WP_003424001.1|934006_934636_-|GntR-family-transcriptional-regulator
MNNSSIPTYKKIALDIANKIQLNNILEGDILHGRSTLSSKYNVSPETIRRSMILLEDVEVVKTIKGKGILVLSREKAISFLNRNKSIDSIRSYKTEIDKLLNNRKEIENQLLKSIQGIIDYSSRFNEVNNIIPLEFVVPENCLYIGKTVGEIMFWQNTGATLIAVKRNDELLLSPGPYISLNPNDVLIVVGNDNIRNSVPQFLYPKNNL
>NZ_CP013239.1|WP_071982188.1|933147_933870_+|Spo0E-family-sporulation-regulatory-protein-aspartic-acid-phosphatase
MKEICDNCKINNRIEEYKEKLNSSIENRNGDLLDDEVVLSSQFLDNFVYKCVSCNKNINYLSKLNLREVFGTHTTFYYYGEQHLLVNLYFYINEGIKNNELIYISMEEELYNKLLDFLISNNVSTENIKFKNVKELILGHKKGGFNGLVETAMGILGSSNIEKYNGLRWIGQPSFAIKGTSENDFLEMEEDLNKFIKNMNAALLCVYDAYDYMHKGKIINKKVIEESFKTHSFVLNNYVS
>NZ_CP013239.1|WP_002579051.1|932571_932910_+|P-II-family-nitrogen-regulator
MKKLEIVINSEKLEDLKKILSDCNANGVMISNVMGYGNQKGYKTIYRGTEYSVNLLPKVKVETVVPADVAEKIIDKVLKEISTGNYGDGKIFIYDADDIVRIRTGERGKDAL
>NZ_CP013239.1|WP_071982187.1|930949_932527_+|ammonium-transporter
MKKSLKLLGIILFLGALALTFALAISPTSGSDPTGAAYIATTGNETITDVATTANKAYYGANYVWVMITGFMVFFFQCGFAMVETGFCRGKNAAHTMTMNFMVFLVGAIGYFLTGFAIQFGGSGGAAGLGTGGSALNAMLSIPGLGGILGYKGFMLSGNGIYDPGIFALFFFQMVFMDTTVTIPTGALAERVKYSAVIILSFFISMFLYPLFGNWVWGGGFLATLGQNFGLGHGVVDFAGSAVVHSMGGMIALSSAIVIGPRIGKFKKDGTARPFPGHDIPMAIIGTIILFFCWFSFNAGSTLNSSDFRLAVVATNTMIAGAVGGLVAMFYMWIKYGKPDPSMTANGALAGLVAITAPCAFVNGPCAFFIGGIAGYLVCISVAFVENKLKLDDPVGAISVHCVNGVWGIIALGLFADGAYGDGINGIAGGVRGLFYGDPSQLVAQLIAVAVLVIWGFGVSYIFLKVLDKVWGLRVKPEEELAGLDIPEMGVSAYPDIQLIKSPELDYYSADNIEIKQIKTFKEKV
>NZ_CP013239.1|WP_043852473.1|930562_930889_+|hypothetical-protein
MKFINSNDDSILSKKIAVYFLQCVSLMIVFLGMFFSIFSAINHISIKVLSVNISGIVFGVLVFYLGIKYYLSVCNLKEKLLKNKYKFSWSNFNFQKGRKISSFIKGKF
>NZ_CP013239.1|WP_071982186.1|929472_930150_-|helix-turn-helix-domain-containing-protein
MSKRISNEVKLITVKNITDNRVSLRDAARSLGVAYQSIQKWITIYKGFGIEGFNKRNGNHKYTSELKEQAVTDYLSGNSSLMDICIKYKIRSHNQLLNWILKYNSHNKLKASETGGINIMTKGRTTTYKERIEIIKYCIENENNYAETAEKYRVSYQQVYSWIRKYQTQGIEDLQDGRGKRKKESEMSELEKLKAKNKLLEAENRRQLMEIEFLKKLDEVERRRF
>NZ_CP013239.1|WP_104675536.1|928585_929515_-|IS3-family-transposase
MPKKARRGRKEAILSQVRNESIYITIQELHDEKAFPILELCEFAGIARSAYYKWLKRNESSNELFNQNLLPLIKDAYEEKQGILGYRQMTIKLNREHEFNVNPKRIYRLMSILNLKSVCRKKKRNYKKSQPQITAENILNRDFYSNKFGEKWLTDVTEMKYGLGGKAYLSAILDLADKSIVSFEIGHSNNNDLVFKTFDTAHKKYPGAKPLFHSDRGYQYTSKKFKEKLDGANMTQSMSRVSRCIDNGPMEAFWGMLKSEMYYLKKFNSYNELETAIIEYINYYNNYRYQKRLKCMTPLEYREYLESVA
>NZ_CP013239.1|WP_003423897.1|927049_928462_+|glycoside-hydrolase-family-1-protein
MFHKKLKNFPKDFLWGASTSAYQVEGASLEYGKGPSVQDIKKIPEGTPDFKVSSDHYHHYKEDVALFAEMGFKAYRFSISWARLIPNGVGEINPQGIEFYGNLIDECLKYGIEPIVTMYHFDLPAALQTKGGWSNRETIDAFVNFAKVMFENYGDRVKYWLTINEQNMMTLVGDVIGTLDGIETDNVQKELYKQNHHMLIAQAKAMKLCHDMCPNGKIGPAPNISAVYPASSKPEDILAASNCSAIRNWLYLDMAVHGRYNPTAWNYMVEKGIEPTIEDGDMEALRSGHPDFIAFNYYNTATVEAFPGEITNERSSGDQQSGHGEQGMFKGVSNPNLQKTEFGWEIDPVGFRNTLREVYERYALPLIITENGLGAYDKLEENDTINDDYRINYLRKHIEQAQLAISDGVDLIGYCPWSAIDLISTHEGFKKRYGFIYVNRDEFDLKDLRRIRKKSFFWYQNVIKTNGEEL
>NZ_CP013239.1|WP_071982189.1|937675_939436_-|1-deoxy-D-xylulose-5-phosphate-synthase
MYLEKINSPEDVKNLSINEMNELSSEIRQVLLKKLSEHGGHIGPNLGIVELTVALHHVFNSPQDKIVYDVSHQSYIHKMLTGRRDAFINSEKYDDVSGYTNPHESEHDFFNIGHTSTSVSLACGLAKARDLKDEKDNIIAIIGDGSLSGGEAYEGLNNAAEAGTNMIIIVNDNDMSIAENHGGLYKNLKELRDTNGKCECNFFKSMGLDYYYVNDGHDFDQLISVFNKVKDTDHPVVIHIHTIKGKGFELAETNKEQWHWGMPFVLETGDSKFPMGDAEDYGDLTAKYLLNEMKQDPTVAVITSGTPGVLGFSPERRAEAGRQFIDVGIAEEHAVALASGMAANGGKPVYGVYSTFLQRTYDQISQDLCINNNPAVILVTLASVYGMNDVTHLGLYDIGMMSNIPNLVYLAPTCKEEYFAMLKWSMNQQDHPVAIRIPAMGVINSGNEDNTDYSELNKYQVTKQGKDVAVIALGDFYQLGQSLVEKLSSENDIEATLINPKYITGLDEKLLETLKKEHKLVITLEDGILEGGFGERIARYYGSSDVKVLNYGIKKEFLDRYVPDELMKKNRITPEQMSEDIMNILK
>NZ_CP013239.1|WP_071982190.1|939885_940281_+|hypothetical-protein
MNFIRGWGDEASMKSFLKSALGFGIAAIILNTLWGVITSRIGLKGGWICGFILTGTLWYVNHYLGIVENKKESAFIDMGFAVAICSFSRDFLKNGLEGIVTSAPTFICVIIGGTIAGVVAGIIKRHQKQGE
>NZ_CP013239.1|WP_002579058.1|940282_940618_+|hypothetical-protein
MNSFGALTTIFGSAIFSFGVIMYWDKFVSLLGAFGGFIAAMLIPGTMWILNHGAENHLIKQSGSIWIDMAWAVGIGVLISSIMQGGSLRKSKWIMLSAIIGGFIGGFLINM
>NZ_CP013239.1|WP_071982191.1|940698_942126_+|6-phospho-beta-glucosidase
MAFNKDFLWGGAVAAHQLEGGWNEGGKGPSTADVMTAGAHGVPREITDGVIEGLNYPNHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWSRIFPNGDELEPNEDGLKFYDDMFDELLKYNIEPVITLSHFEIPYGIVKNYGGWRNRKVIDMFVRYATAVMERYKDKVKYWMTFNEINNQKQTGVDIFPWTCSGIIYEEGDNREEIMYQAAHHELVASALVVKKGHEINPDFKIGCMVSFVPIYPYSCNPDDMMLQVEAMHDRYFFSDVHARGHYGTYAIKEWERKGYNIKMEPEDAQILKEGTVDYIGFSYYMSNAVKSDAQNTEDLLSGHSASVKNPYVKASDWGWQIDPVGLRYSLNTLYERYESPLFIVENGFGAIDVKEEDGSCNDDYRIEYLKAHIQEMEKAIEVDGVDLMGYTPWGCIDLVSFTTGEMKKRYGFIYVDKDNDGNGTLNRSKKKSFDWYKNVIATNGEEL
>NZ_CP013239.1|WP_024039349.1|942422_943160_+|MurR/RpiR-family-transcriptional-regulator
MFECDEIKNLNELELSLYEYIMKNSEKVMYMKIRDLANEAHMSTTTVLRFCRKLNCDGFSEFKLKFKMYMDSKEDRKINEDTSFIIDNFKRLASDEFKDKINGLCQLIKEHDNIVFLGGGLSGIVGKYGSRYITSIGKFSIYIDDLYYPMNCENFKRGLVIALSESGETVEIIGAINRFKKEKCTIASITNSENTTIARMSDFNISYYIPEERIGTIDITSHLPPMYILETVGRKLYNEKIRSKK
>NZ_CP013239.1|WP_070780375.1|943518_944091_+|hypothetical-protein
MSKMKEFQKTAGGTINLDWNLVEEEIGFKLHDNLKDFYSRILGSKNRILGNKNKSGIISGIIKFNLTEFVKRYANKENWLDDTNSNNSYAEFTLCLLERTNDKYILDFIEEAFWGDWTGGNDFGNRAYVGEILINMGQLSLLFNNDTGEFEWVDFGYGNFDTFCHNPYGIVADNTQEFLNKFKAVDIGVQ
>NZ_CP013239.1|WP_070780374.1|944151_945000_+|ankyrin-repeat-domain-containing-protein
MEKDNSLLYACYINDMDLIKERIVGVTSAQLKKSTIETGTPLHAATKNGNIEAIDLLLSAGADIEKGNFMKNSPLLTCIEERKLDIAKYLIERGANVNKKGCQNRNALSQLILYGWDKNFAELLVEKGCLVNSTSVDKISLLEDAVITNNCDAISFLLKNGVDLANLNKSLCFAITYNAPKAISYLIQCGGDLDLMYKSCKGVYKSLYHDTLVLDNRGDRRETIKILLEAGVDFKIAPVRAITTLTLEKTKLSPYKYAKEQLSKYPEKTFISKNLELIDSVL
>NZ_CP013239.1|WP_070780373.1|945051_945441_+|hypothetical-protein
MEGKLMELIDELIDCLNSIDYSEFDEEYIDDLLDSRDSNPFDDKWCRISKKINSLKNDENYTNLNKEMQDKIREKVFIIIKKNTFSELSDYVSDDFGLIYDSLIVNYKDEWLDKLIEEYKNKRIPVGEL
>NZ_CP013239.1|WP_002579061.1|945720_947019_+|PTS-sugar-transporter-subunit-IIC
MSSFLNEKVVPAIMKFVNLKAVVALKDGIIFTLPLTLIGSVFLLLAQIPYKPLADFISSKGWDAPLFQANGATMGIMAMIACVGIAYTYAKNEGYEPLSAGVVAFSIFCLTTNSYVITEDGTKVGSVIPMDWTGGKGMVTAIIIGLIVGAVYSWFMKRDIRIKMPAGVPQGVADSFSALIPAAILITGGTILYSVFKIFDTTFIEFIYKVLQTPLQGMTDSLGGVVVMGLIIPFLWFFGVHGATIIGGIMGPILTSNTLENGAIVTAGKELTLANGAHIVTQQFLDQFMTVTGSGMTIGLVLCMLFLGKSAQFKQLGKLAIVPAVFNINEPVLFGTPIVMNPLMAVPFIAMPVISGLILYFSIYFGIVPPFGGVLVPWTTPPIISGLLVGGVRTALLQTAILVLSFFVYLPFFKKCDNMSYEAEQAAEASSN
>NZ_CP013239.1|WP_002579062.1|947190_947514_+|PTS-lactose/cellobiose-transporter-subunit-IIA
MEQLEMQIMNIIINAGDCKNHAYMALSKVNEGQYEEAEKEMVLANDALAKAHDSQTEMLQKEAAGEKVDFSILFVHAQDHLMTAISEKNLIEQIIELRKVVNMLINK

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Crispr_ID: NZ_CP013239_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013239_3

2181206-2181289

Orphan

Consensus_repeat	Method
TGGTATTATCTAAATGAAGATGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013239_3

>merge|NZ_CP013239|3|2181206-2181289|CRISPRCasFinder
TGGTATTATCTAAATGAAGATGGAATAATGCAAAGAGGATGGGTTTATAGTAATAATTCATGGTATTATCTAAATGAATATGGA

>NZ_CP013239|3|3|2181206-2181289|CRISPRCasFinder
TGGTATTATCTAAATGAAGATGGA	ATAATGCAAAGAGGATGGGTTTATAGTAATAATTCA
TGGTATTATCTAAATGAATATGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013239.1\|WP_003411911.1\|2184753_2185680_+\|LD-carboxypeptidase	unknown	unknown	gnl\|CDD\|132882
NZ_CP013239.1\|WP_003411879.1\|2190768_2192301_+\|cell-wall-binding-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP013239.1\|WP_071982556.1\|2168085_2169534_+\|TrkH-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223246
NZ_CP013239.1\|WP_003411887.1\|2179112_2180483_-\|iron-hydrogenase	unknown	unknown	gnl\|CDD\|274983
NZ_CP013239.1\|WP_003411938.1\|2187792_2189460_+\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|235154
NZ_CP013239.1\|WP_003411962.1\|2183254_2183857_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|197609
NZ_CP013239.1\|WP_071982559.1\|2184118_2184616_+\|CarD-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224248
NZ_CP013239.1\|WP_071982557.1\|2171580_2172897_+\|polynucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|237339
NZ_CP013239.1\|WP_003427727.1\|2173052_2173316_+\|late-competence-development-ComFB-family-protein	unknown	unknown	gnl\|CDD\|378482
NZ_CP013239.1\|WP_003411922.1\|2185724_2186645_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP013239.1\|WP_071982560.1\|2192491_2193541_+\|M42-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349907
NZ_CP013239.1\|WP_003411914.1\|2165860_2166445_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225023
NZ_CP013239.1\|WP_003411954.1\|2181793_2183191_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|341130
NZ_CP013239.1\|WP_003411910.1\|2166716_2168096_+\|Trk-system-potassium-transporter-TrkA	unknown	unknown	gnl\|CDD\|236541
NZ_CP013239.1\|WP_003411935.1\|2189562_2190624_+\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235440
NZ_CP013239.1\|WP_002580017.1\|2169709_2170426_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP013239.1\|WP_050792550.1\|2175832_2179060_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP013239.1\|WP_003411944.1\|2186805_2187417_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224882
NZ_CP013239.1\|WP_071982558.1\|2173476_2175513_+\|penicillin-binding-transpeptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|223839
NZ_CP013239.1\|WP_002580018.1\|2170594_2171491_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651

Protein	Function_ID	Function_description	E-value
NZ_CP013239.1\|WP_003411911.1\|2184753_2185680_+\|LD-carboxypeptidase	gnl\|CDD\|132882	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment of preformed D-Ala-D-Ala dipeptides. Some enzymes possessing LD-carboxypeptidase activity also act as LD-transpeptidase by replacing the terminal D-Ala with another D-amino acid. MccF contributes to self-immunity towards microcin C7 (MccC7), a ribosomally encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. Its possible biological role is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that MccF is involved in microcin degradation or sequestration in the periplasm.	1.61632e-119
NZ_CP013239.1\|WP_003411879.1\|2190768_2192301_+\|cell-wall-binding-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.73004e-19
NZ_CP013239.1\|WP_071982556.1\|2168085_2169534_+\|TrkH-family-potassium-uptake-protein	gnl\|CDD\|223246	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	1.64607e-114
NZ_CP013239.1\|WP_003411887.1\|2179112_2180483_-\|iron-hydrogenase	gnl\|CDD\|274983	TIGR04105, hypothetical_protein, [FeFe] hydrogenase, group B1/B3. See for descriptions of different groups.	3.96367e-112
NZ_CP013239.1\|WP_003411938.1\|2187792_2189460_+\|2-isopropylmalate-synthase	gnl\|CDD\|235154	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated.	0
NZ_CP013239.1\|WP_003411962.1\|2183254_2183857_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|197609	smart00257, LysM, Lysin motif.	0.00115465
NZ_CP013239.1\|WP_071982559.1\|2184118_2184616_+\|CarD-family-transcriptional-regulator	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	1.35856e-27
NZ_CP013239.1\|WP_071982557.1\|2171580_2172897_+\|polynucleotide-adenylyltransferase	gnl\|CDD\|237339	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional.	2.93113e-95
NZ_CP013239.1\|WP_003427727.1\|2173052_2173316_+\|late-competence-development-ComFB-family-protein	gnl\|CDD\|378482	pfam10719, ComFB, Late competence development protein ComFB. This family is conserved in bacteria. Some members, with three conserved cysteines, are annotated as late competence development protein ComFB.	2.66768e-22
NZ_CP013239.1\|WP_003411922.1\|2185724_2186645_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	9.46808e-15
NZ_CP013239.1\|WP_071982560.1\|2192491_2193541_+\|M42-family-metallopeptidase	gnl\|CDD\|349907	cd05657, M42_glucanase_like, M42 Peptidase, endoglucanase-like subfamily. Peptidase M42 family, glucanase (endo-1,4-beta-glucanase or endoglucanase)-like subfamily. Proteins in this subfamily are co-catalytic metallopeptidases, found in archaea and bacteria. They show similarity to cellulase and endo-1,4-beta-glucanase (endoglucanase) which typically bind two zinc or cobalt atoms. Some of the enzymes exhibit typical aminopeptidase specificity, whereas others are also capable of N-terminal deblocking activity, i.e. hydrolyzing acylated N-terminal residues. Many of these enzymes are assembled either as tetrahedral dodecamers or as octahedral tetracosameric structures, with the active site located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers.	3.68461e-152
NZ_CP013239.1\|WP_003411914.1\|2165860_2166445_-\|hypothetical-protein	gnl\|CDD\|225023	COG2112, COG2112, Predicted Ser/Thr protein kinase [Signal transduction mechanisms].	5.31985e-06
NZ_CP013239.1\|WP_003411954.1\|2181793_2183191_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	3.93432e-25
NZ_CP013239.1\|WP_003411910.1\|2166716_2168096_+\|Trk-system-potassium-transporter-TrkA	gnl\|CDD\|236541	PRK09496, trkA, Trk system potassium transporter TrkA.	1.1033e-170
NZ_CP013239.1\|WP_003411935.1\|2189562_2190624_+\|histidinol-phosphate-transaminase	gnl\|CDD\|235440	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional.	0
NZ_CP013239.1\|WP_002580017.1\|2169709_2170426_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	6.02201e-95
NZ_CP013239.1\|WP_050792550.1\|2175832_2179060_+\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.33664e-50
NZ_CP013239.1\|WP_003411944.1\|2186805_2187417_-\|hypothetical-protein	gnl\|CDD\|224882	COG1971, COG1971, Predicted membrane protein [Function unknown].	2.81845e-10
NZ_CP013239.1\|WP_071982558.1\|2173476_2175513_+\|penicillin-binding-transpeptidase-domain-containing-protein	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	1.05125e-113
NZ_CP013239.1\|WP_002580018.1\|2170594_2171491_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	7.6785e-65

>NZ_CP013239.1|WP_003411887.1|2179112_2180483_-|iron-hydrogenase
MNSKYTDLFHELIQAYYDGNFDETLSRIMVCHESSPQETFKIITSLCGVNIEFDNNYIYNLKKAITMYSVNKRIVEKLECSGVNCIKSKDDKFTCEAACPFNAIKYDTTNKTTYISKDICINCGICVDSCKGGRILDKVEFIPVMNLIKENKTVIAAVAPAINGQFGDNVSMDMLREAFIKIGFSDMIEVAFAADILSIKEACEFDKHVNKDGDLMITSCCCPMWVGMLKKVYTSLVKDLSPSISPMIAAGRIIKKINPDAKVVFIGPCIAKKAEAKENDLKDVIDFVLTFAELDEIFKALKIDLSSLKGIPSKDYTSRGGRMYARSGGVSTAVSDIIEELYPDKFKSFKSSTASGVKECKEILEKALNKELDSNFIEGMGCKGGCVGGPKTLIPLEKGKQQVDNFAFDSPIKVPLHSESLDNILKEIGINSIDDFKDKQKMSLFERDFNSNNVKK
>NZ_CP013239.1|WP_050792550.1|2175832_2179060_+|sensor-histidine-kinase
MIIINKLKNTILKISVIFFILNLFTSISVVKAEAYSNIVFKNITIEDGLAQATVECMIQDSRGYMWFGTNDGLSRYNGHEFEVYRNEIGVDNSIVNNYIVCMNEDRDGNLWIGTIDGASKINLSTNEITNYKNSSGLSNNNITEILVTKDGEILLATIDGLNIYDKTNDRFTRIFNNEYLKDQEIYSLDEDINGDIWLGGSKNITKINLKNNTCEDFSDINKEYEKINDCAYKVLCDDKYIWVGTISNGLYKINIETSQIETINLSNSKISSNNIHTIMKDKNGIMWIGTDSGLVKYDSKNDEYNTYVNKAYDKYSLVDDYIYSVIQDRSGLIWVGTYAGVSMFEPENKIEHYKVDPLSHSSINENLIHGIYEDDDGLIWIGTNTKGVNILDRKNESIYDISEFTNGTALSSNSINDISGHANKIFIATNNGLNIYDKNTRKISVYNEKQGLNAKKIRNITYDDSGVLWIGTTNGINILNLETDEITDLNYILDKYSLDDRYSECIFKDSEGFYWLGSFLNGGLIKIDPYNNTAIQYKYEGKDGDLSNNTVRTIIEDDEKNIWVGTSGGLNKLDKETGKFKTYTTSDGLANNNIYGIVIDGTGNLWMSTNLGISKLDREKDRFFNLNITDGLQSNEFNGHSYGKLKSGELIFGGINGLNIFNPDEILNNMYIPRVEFDRFRVNGRTIDTLQDAKLNYNENTIGIKFFLPDYKNIKNIQYYYSLEGAGNDWSLVNTNELVLSNLGSGTYIFRVKARNSSGIFSEESSFKFTIKPPFWRSAEFILIYILIGVSLVVLIVKSKNTKMRLLDDMVSKRTRELSDEMEKNTELLNKIINLEKRKNAYLVNISHDLRTPLNVLSSIHQLINQLNKSESGIEREKLDYYMNIFGKNVDRLLKLINDLIDSSKIEHGNYHINIGKHNIVYIVEDTALSLKDYVESKNIELIIDPEVEECFIECDSNEIERCIINLVNNAAKFTDEGGRILVSVVELENEVKIMVSDTGIGIDEKHLETVFDRFNQVIDSNKETKGGSGLGLTITKLIVGLHNGRIFAESEINVGSKFTIILPKKQPKEKVKKI
>NZ_CP013239.1|WP_071982558.1|2173476_2175513_+|penicillin-binding-transpeptidase-domain-containing-protein
MEKKKNLYMLVGVLIVVVPLVICTIIYMGYSYTHKPENKWQEYTELLQNKEYDKMYDLIDSTAQAKISREDFVARNKNIYEGIEAKDINITIKSISKEDNDTLINYNTKMDTIAGELEFDNSVKIASELGKGHTIKWTSKNIFPDLGENDKVRVKTLKGRRGNITDRNGQLIATDSYLSNVGVVPGKLGDNKEESIAKIANILKCSTETINKALSANYITDDMFVPIKDIPYGDAKVVDLLKVPGVMIKEKDSRVYPLGRDTAHITGYVQSINGDELEQNKDKDYTENSLIGKAGLEKMYEDFLRGIDGAEIYIQNSEGEKKSVVLSKDARNGDDLKLTIDINVQKKVNEELGSDKGCAVVMNPENGEVLALSSTPSYDPNDFILGMSQEKWNTLNNNEDKPLFNRFQATSVPGSALKPIIAAIGVDSGSVKPDQVRKISGLAWQKDESFGNYYVTRTSNIEEVNLESALVYSDNIYFAQIAMDMGSNLIEEKLKSFGFGEKIPFEFALYNSQYSNDVKIKEGAQLADTGYGQGEVMVNPVHLTSMYSMFLNQGNIIEPHLVIDNKNNNIIWKKSVVSKESAQVVLNDLIQIVENPAGTGHEAYNSKLKIAGKTGTAEIKNSQTDTSGTELGWFVGMTTEGDNKVLVTMMIEDVKGRGGSHCVVPKVKDVIESVSLKQ
>NZ_CP013239.1|WP_003427727.1|2173052_2173316_+|late-competence-development-ComFB-family-protein
MKKITNCMEISVKECLDKLIEESNGCKCEKCRYDMMAIALNNLKPYYVTTHLGEVITKIKNMEQQSEANIVVEVTKAIKKVHMSPKH
>NZ_CP013239.1|WP_071982557.1|2171580_2172897_+|polynucleotide-adenylyltransferase
MNYKLKIPSDVQYIINVLIENGYEGYMVGGCVRDLLINREPNDYDITTNAKPEVVARLFDKVILTGLKHGTVTVVINKVQYEVTTYREDGEYKDSRHPENVKFVTDIKNDLSRRDFTINAMAYNKEKGLIDYFDGLSDLKNKVIRTVGNPEKRFTEDSLRMLRAVRFAVQLDFKIEESIIQSIKILNKNLEFISKERIREEFNKIILKNPNGLKLLHECSILKYVADDLDKAYGYYINDKINCYNLYEHLILSSCNIKKDLSLRLTMLFHDLGKLKDCNNKLEKVDNIFIESACIAEKILRSLKYDNGTIKKVKTLITYMHSDLEDKVSIKKLLNIIDVELFEDLIKVKKAHIMSENIEEVKFLNIEKLYCDILKKNECFRIRDMKINGEDIIKIGVKKGKDVGTMLNYLLCKVIEDNNLNYKKKLLELAEDKLSMSI
>NZ_CP013239.1|WP_002580018.1|2170594_2171491_+|MurR/RpiR-family-transcriptional-regulator
MEELNNENSKDLMRLIQGKFIRLSKGQKLIAEYILKNYDKAAFMTAAKLGNAVGVSESTVVRFAIEVGFSGYPKLQKALQELIKNKLTTVQRLELRNDYFSDGDALKGVLKADMENIRATLEKINQNTFQDVVQHIFEAKRIYIIGLRSSTALAEFLGFYLNIILQNVKVVSYGISDVFEQMINVGEGDLVIGIGFPRYAAKTIDALEFSQDRGAKVVALTDSLLSPLATKADYTLIAQSNMASFVDSLVAPLSVINALIIAVGMREKENISNVFSNLELIWKNYNVYSINNKNVADD
>NZ_CP013239.1|WP_002580017.1|2169709_2170426_+|rRNA-pseudouridine-synthase
MEERLQKYMASCGIASRRKCEELILLGKVKVNGNIIEELGFKVNPLKDIVEYDGRVITKEERKVYIMLNKPEDVITSVKDEKDRKTVIDIVKVNERIFPIGRLDYDSSGLILLTNDGELYNKIIHPRVELDKKYVAVVKGEVSLDDKEKFESGIDIGGYITAPAKLKMLEYSHRKDLSTIEVCIHEGKNRQIRKMCSAINHEVISLKRVSIGNIRLGQLKKGEYRYLNDEEMKYLMSL
>NZ_CP013239.1|WP_071982556.1|2168085_2169534_+|TrkH-family-potassium-uptake-protein
MNYKAVLSILGNVVKYMVALLFVPLLIALYYGEGDAKSFLLTIFIGAPIGFILSNIKAEKKAIYAKEGFLIVGFAWIIISAIGALPFVISGAIPSFIDAFFETVSGFTTTGATILTAIEGLPKGILFWRSFTHWIGGMGFLIFMLALIPSLGSNSIHLLKAESPGPSPGKIVPKIKETAKILYLIYFALTLIEGILLMCAGMNLYDAVIHAMGTAGTGGFSNMNASIAAFNSPAIEWIITIFMLIFGINFALYFQILKGNFKGFFKNEELRYYLLIILSAFILITVNIISLNGGDIILSVRQSAFQVSSIVTSTGFATVDFNFWPTLSKLIIVMLMFVGAMAGSTGGGIKTVRIVIMLKAIKREINKIIHPKRVNSVKIDGKTVDEDIIHGVFLFIGAYIIISLIAIFIISFDNFDVVTTVTSVITTMSNIGPGLEVVGPAGNFAAFSPLSKLVLSFCMLAGRLEIYPMLIMFSPSIWRKNH
>NZ_CP013239.1|WP_003411910.1|2166716_2168096_+|Trk-system-potassium-transporter-TrkA
MMNIIIVGAGKVGYAIAKNLSIGNDNVTIIDNKMTALERINNNLDVMCVKGNCTSLKVLNEAGIEEADLLISVTNSDELNMLCSLAGKKLGAKHTVARVRNPGYDEDITLLTEAVGIDLVINPEKAAAGEISKLIKYPSVCSIDNFANGRVNMVGFDITEDTGLENKKISELGYLRGNVLFCGIERNGEMIVPKGDYIFEKDDHVYVIGEHKDIQEIFKKFGKYRRKVRSSMIIGGGRIGYYLTKIVSEAGVHCKLIENDFNKCEELAELIPNSVIINGDGLDQELLLSESLEEADSFITLTGRDEDNLIASLFAAKNGVKNIITKVTRDNYNEIAKTIGINSTINPKSVTANKIIKYVRTLKNRKKCPIENVYKICNEKAEAIEFIVKENAQYINIKIKNLNFKYDSLIATIVRENKTIIPSGDDILKPGDRVVVVTKDTNLLSLSGIFVGGGKNNEL
>NZ_CP013239.1|WP_003411914.1|2165860_2166445_-|hypothetical-protein
MRYILDIKECEFLGKGHEGSVYLTPEGYALKIFFKKKKAKEEVSILELVKTSKFFPKVIFIAGNMILREYVDGVTLFEHLKKNGISYKLSCEIIDLIEDFKKMKFKRLNIRNAHIFVDKNENIKVIDPRKIFTKNTPYPKDIIKILVHLNIFDDFLKNVAQYRPDLLQYYADAYNYYVYMSKKSMHIDMHAEIC
>NZ_CP013239.1|WP_003411954.1|2181793_2183191_+|L,D-transpeptidase-family-protein
MNEFMYEKSTKISCILLIVLFLIYFLGAFYFKTHFFFKTSVNGIDISFKTVDEAKDIVYNELSDFKVVLKDDSNEDKIESKDINLEYNGDKKIEEIKEKQSFFKWASALIDNKQYENLDIFTYDESMLEEKVKDLNFFKNLDVIEPKNPQFQYADGKYIVLEEVKGNKLNYEKTVKSIKSAIEHGNKVVDLNTTGCYERPKYTRDSEKVKEVKDIIDKYVYSKIVYSFDELMETVDGSIINKWIDIDDDMNPSINEKKVKEYIDSLCEKYNTVGKERKFDSSIGKTVIVKGGYYGWKINSNEEVKALIENIKHGQSVFKEPIYSQKGLSRSDDDIGDTYVEVNITRQHLWFYKNGKLLTQGDIVTGCQSKNTPTAEGVYGLNYKQKDATLKGDGYSSKVSYWMPFNGNIGLHDARWRSSFGGNIYKTNGTHGCVNMPQYLAKIIFENIESNTPIICYSEDTKNNN
>NZ_CP013239.1|WP_003411962.1|2183254_2183857_-|LysM-peptidoglycan-binding-domain-containing-protein
MKKYYYLFLFTALISILLLSCQFIPSLKSNKPISPNNNSFDIHSNDANQNSDSTNNYENSNSNSGDFVIPCSNAVHITIREFINNQQCSRYLVKENETLNDILMRYNSTCAPNASLKLINELNNITSTNDVKAGTTLKIPETTMKNGSLYTISQGDTWSKICEKYYPVYDIDSIMKLLIFINDYKNDILPLGDTIFLPKI
>NZ_CP013239.1|WP_071982559.1|2184118_2184616_+|CarD-family-transcriptional-regulator
MLEFNIGDKVVYPNQGVGVIDLIEEKEFKGKKEKYYKIHLINNTMKLSLPLSRVKSANMRHISDSKTLDSKLNNIKYYVKEVDKLAKTNYKERNEIYSTKVKSGTLEDFLEIISNLTELKTIHDLNSMEKTILRNTKRILIDEIAQSKKISLDEAGYLLDIFMNS
>NZ_CP013239.1|WP_003411911.1|2184753_2185680_+|LD-carboxypeptidase
MIRPKPLKKGDTIGIIGTCSPPKKERIDPAIKWIKSLGLEVVIGRSVNENHGYLCGEDKVRADDLNYMFHNKDIKGIFIVRGGYGAARILNMIDYDNIKKNPKILAGYSDVTALHIAINQKCKMITFHTPMPCTEFYTDIDDYTVESFKDSIFKINYTKKVVNPDKCKSFEGLVKGNACGRITGGNLSIIASLMGTPYEINTKNKILFLEDIDESPYKIDRMLTQLRLANKFKDAAGIILGSWTGCDAKDTSRSLSLNEVFNEIIIPEKRPTIMNIACGHTLPTMSIPLGSNISINADSLEILNIDTD
>NZ_CP013239.1|WP_003411922.1|2185724_2186645_-|DMT-family-transporter
MNNYKGIIYAILSSIAFGIMPIFAKIAYKNGSNPTSSLLFRFLISGLILLLYLNFKKVSIKISVKQFLLLFFIGMFGYTITTITLFVSYNYLDSGLATALHYIYPALVCIFSFILYKENITKEKIFSLVLSIIGVYSLIAFESKTLNILGILLALFSGLGYALNVISLSFKSIKSIDNRVVTMYICFGASLGMIIYGAFTESLTFTINLEMMISYIGLSIISTITSMLFLLKAIKLIGSTSASILATFEAVVSIIMGIIFLNEKLTFALILGTSLIIISTTILAREKSPKPCDQYNKLSNAIDINH
>NZ_CP013239.1|WP_003411944.1|2186805_2187417_-|hypothetical-protein
MNFLSALLLSTAINIDTLKISFSSKNDSSVPLNLKILFASIFTTFITFLAFCFGKIIDIYFTHSLSNIFGSVLLGFVGVYYLIEHIRIQKDNDGYDTSFYVNNFKKHKNLIELNNPYIYSDSFKNLFNISIALSLNNILPSIAGSLTNINLPLTILFNFLICIFFYIAGNFIYNKKFIKYIKTNHYLITSILLIILSVFESFH
>NZ_CP013239.1|WP_003411938.1|2187792_2189460_+|2-isopropylmalate-synthase
MLNYKKYKRFETIKLKDRTWPDNEITKAPIWCSVDLRDGNQALINPMTVEEKIEFFNLLVKLGFKEIEIGFPSASQIEYDFLRRLVDENLIPDDVMVQVLTQARPHLIKRTFESLKNVKKAIVHIYNSTSVLQRDVVFNMSKEEIKEIAVEGTKLVKEYAKDFEGEILLEYSPESFTGTEVDYALDVCEAVMDTWEASKDNKVIINLPATVEMDTPNVFADQIEWMCRNFKDRERVILSVHPHNDRGTGVADSELALLAGADRIEGTLFGNGERTGNVDVLNIAYNMFSHGVNPQLDIENINEIIEVYERCVKIPVHVRHPYAGNLVFTAFSGSHQDAINKGMKKYNERHGNIWEVPYLPIDPSDLGREYEALVRINSQSGKGGVAFVMDHCYGFKLPKTMQKEFADIIQKMSEVKGEISPSEVMDAFTKEYLDLDVPFKLLKCTFTDISEMDGSEDTKADVIVVYNGEQRVLEGIGNGPIDSFKKALAESSLINVKIIDYTEHAMSTGSEAKAASYVYMERLDNKKKTFGVGTDSNITRASIKSMMSAINRLYK
>NZ_CP013239.1|WP_003411935.1|2189562_2190624_+|histidinol-phosphate-transaminase
MSIYWNDHVKTLEPYVPGEQPKDKKYIKLNTNENSYGPSPKVIDAIKNAVCDDLKLYPDPTCSNLSMEIAKYYHISDDEIFIGNGSDEILAFVFMTFFQKDRKVLFPDISYTFYNVYAEMFNVNYEHIKLDDKFNIPLEGFYKDNGGIIFPNPNAPTGKYIETNKIIEVLEKNKNSVVIVDEAYIDFGGKSMVEYIKTYPNLLVIQTFSKSRSLAGLRVGFAIGNSQLIEGLNRVKNSFNSYTIDRLALIGAAEAIKDKNYFDVTTKKIIRTREDTVKKLENLNFEILDSKANFIFVKHKEFSGKYLYEKLKENGVLVRHFNKERIEDYLRITIGTDEEMSLLIANLKKILKY
>NZ_CP013239.1|WP_003411879.1|2190768_2192301_+|cell-wall-binding-protein
MTYKKNRLLALGIITIGLSFISTNANAEIKKTEVYEETMQNEKLLANDTSIKEKTQSDYKIKRNWLTEEVASQLNKDFKDLTTEDFEHIIKIDFRYKKIDDTIPDEIALLKNLQYLDLNYCRLYGDIPEEIANMTNLTHLDLGDNKLGKLPESLEKKIIDGDYAYCDVEGNQLRLEKGWHLLKGNWTYIDRYGERLTGVQTIDKVTYDFGEQGFIKEGWEQVDNIWHYYDRVSGMIKNDWKLINSKWYYFNADGIMVTGLQNIQGTKFCFAPSGEMLTGFQNIGGYNYSFCESGGMQYGLVNVNGKQYYFDETTGIMATNTEKVINGKKYIFAADGSGSIKSNVWIDNYTYIQANGQTVNTYYDYSHSNTNYQLFKYMTDLGNQISVDRTAVALHGGITSNNCVYFASEALRRVGVGIPTSTCNTYELENELKYMGFVPCYDLSQLKPGDIVFTNNYSHVYIFMCWDTDGYAYIVDNQSYNFDNKVLHKRQVYQDTSITDRATHFYYYPN
>NZ_CP013239.1|WP_071982560.1|2192491_2193541_+|M42-family-metallopeptidase
MNIYVNKEYLLNTLKEILQENSPTGFCFEIIDKIETIVSGFGYSFERNNKGCGIITIEGKENSKTIGLSAHVDTLGCMVRSITESGKLKFTLLGGPLVPTLDGEYCSIRTREGKIYSGTFLSTSPAAHVFEDAKSKKRDPENMEIRIDEVVSSKKDVIDLGIRSGDFVFIDPKPVITESGFVKSRFIDDKGSVACLLTILEMFKKNNVIPDYTTKIIISTYEEVGHGASSIPKDITEMISVDMGCIGDDLSCSEYDVSICAKDSGGPYDYNMVTDLVNLAEANKLNYAVDIYPFYGSDVGAALRGGNDIRGALIGPGVSASHGMERTHYKALENTVKLIYHYLTKETLR

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Crispr_ID: NZ_CP013239_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013239_4

2422667-2422764

Orphan

Consensus_repeat	Method
ATTATTTCCCGCATCTTTTTTAT	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_CP013239_4

>merge|NZ_CP013239|4|2422667-2422764|CRISPRCasFinder
ATTATTTCCCGCATCTTTTTTATGTTCTTCACAAGATTCTTTAATATCATAATTTTGTGCTACTGAAGTCCAAGCATTATTTCCTGCATCTTTTTTAT

>NZ_CP013239|4|4|2422667-2422764|CRISPRCasFinder
ATTATTTCCCGCATCTTTTTTAT	GTTCTTCACAAGATTCTTTAATATCATAATTTTGTGCTACTGAAGTCCAAGC
ATTATTTCCTGCATCTTTTTTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013239.1\|WP_043661751.1\|2429683_2430451_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP013239.1\|WP_071982650.1\|2432433_2433366_-\|glycyl-radical-enzyme-activating-protein	unknown	unknown	gnl\|CDD\|274163
NZ_CP013239.1\|WP_003414226.1\|2413388_2413676_-\|DUF1048-domain-containing-protein	unknown	unknown	gnl\|CDD\|368835
NZ_CP013239.1\|WP_003427296.1\|2414036_2414369_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367559
NZ_CP013239.1\|WP_071982652.1\|2436213_2437200_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP013239.1\|WP_071982648.1\|2427666_2429694_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
NZ_CP013239.1\|WP_071982647.1\|2426946_2427618_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP013239.1\|WP_071982651.1\|2433443_2435843_-\|glycyl-radical-protein	unknown	unknown	gnl\|CDD\|153086
NZ_CP013239.1\|WP_043853003.1\|2418185_2419175_-\|choloylglycine-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238303
NZ_CP013239.1\|WP_081366103.1\|2425936_2426869_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340424
NZ_CP013239.1\|WP_071982643.1\|2417762_2417990_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071982645.1\|2424393_2425869_-\|YdiU-family-protein	unknown	unknown	gnl\|CDD\|234583
NZ_CP013239.1\|WP_071982641.1\|2414554_2415784_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_002580228.1\|2423866_2424292_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071982640.1\|2413685_2414033_-\|DUF1048-domain-containing-protein	unknown	unknown	gnl\|CDD\|368835
NZ_CP013239.1\|WP_071982642.1\|2415812_2417048_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_027635864.1\|2422938_2423433_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071982639.1\|2411104_2411719_-\|DUF3267-domain-containing-protein	unknown	unknown	gnl\|CDD\|378690
NZ_CP013239.1\|WP_003414877.1\|2412870_2413092_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071982644.1\|2419349_2422277_-\|DEAD/DEAH-box-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120

Protein	Function_ID	Function_description	E-value
NZ_CP013239.1\|WP_043661751.1\|2429683_2430451_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	5.03983e-104
NZ_CP013239.1\|WP_071982650.1\|2432433_2433366_-\|glycyl-radical-enzyme-activating-protein	gnl\|CDD\|274163	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA), benzylsuccinate synthase (BssD), gycerol dehydratase (DhaB2) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines.	5.65768e-132
NZ_CP013239.1\|WP_003414226.1\|2413388_2413676_-\|DUF1048-domain-containing-protein	gnl\|CDD\|368835	pfam06304, DUF1048, Protein of unknown function (DUF1048). This family consists of several hypothetical bacterial proteins of unknown function.	5.74636e-33
NZ_CP013239.1\|WP_003427296.1\|2414036_2414369_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|367559	pfam03551, PadR, Transcriptional regulator PadR-like family. Members of this family are transcriptional regulators that appear to be related to the pfam01047 family. This family includes PadR, a protein that is involved in negative regulation of phenolic acid metabolism.	6.16654e-23
NZ_CP013239.1\|WP_071982647.1\|2426946_2427618_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	8.77386e-71
NZ_CP013239.1\|WP_071982651.1\|2433443_2435843_-\|glycyl-radical-protein	gnl\|CDD\|153086	cd01677, PFL2_DhaB_BssA, Pyruvate formate lyase 2 and related enzymes. This family includes pyruvate formate lyase 2 (PFL2), B12-independent glycerol dehydratase (DhaB) and the alpha subunit of benzylsuccinate synthase (BssA), all of which have a highly conserved ten-stranded alpha/beta barrel domain, which is similar to those of PFL1 (pyruvate formate lyase 1) and RNR (ribonucleotide reductase). Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. DhaB catalyzes the first step in the conversion of glycerol to 1,3-propanediol while BssA catalyzes the first step in the anaerobic mineralization of both toluene and m-xylene.	0
NZ_CP013239.1\|WP_081366103.1\|2425936_2426869_-\|sensor-histidine-kinase	gnl\|CDD\|340424	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.	6.21456e-42
NZ_CP013239.1\|WP_043853003.1\|2418185_2419175_-\|choloylglycine-hydrolase-family-protein	gnl\|CDD\|238303	cd00542, Ntn_PVA, Penicillin V acylase (PVA), also known as conjugated bile salt acid hydrolase (CBAH), catalyzes the hydrolysis of penicillin V to yield 6-amino penicillanic acid (6-APA), an important key intermediate of semisynthetic penicillins. PVA has an N-terminal nucleophilic cysteine, as do other members of the Ntn hydrolase family to which PVA belongs. This nucleophilic cysteine is exposed by post-translational prossessing of the PVA precursor. PVA forms a homotetramer.	1.23851e-141
NZ_CP013239.1\|WP_071982648.1\|2427666_2429694_-\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	0.000188128
NZ_CP013239.1\|WP_071982645.1\|2424393_2425869_-\|YdiU-family-protein	gnl\|CDD\|234583	PRK00029, PRK00029, YdiU family protein.	0
NZ_CP013239.1\|WP_071982652.1\|2436213_2437200_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	9.91929e-41
NZ_CP013239.1\|WP_071982639.1\|2411104_2411719_-\|DUF3267-domain-containing-protein	gnl\|CDD\|378690	pfam11667, DUF3267, Putative zincin peptidase. This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.	1.04377e-15
NZ_CP013239.1\|WP_071982640.1\|2413685_2414033_-\|DUF1048-domain-containing-protein	gnl\|CDD\|368835	pfam06304, DUF1048, Protein of unknown function (DUF1048). This family consists of several hypothetical bacterial proteins of unknown function.	2.1068e-31
NZ_CP013239.1\|WP_071982644.1\|2419349_2422277_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	2.71693e-66

>NZ_CP013239.1|WP_071982644.1|2419349_2422277_-|DEAD/DEAH-box-helicase
MSEELKSILDNVIYLDIETTGLDETSSEIIEIGAIKFKDNTITTFETLIKPRGRVPIGIYNLCTGLSKEELYSAPSLGNVRESLSQFLEDLPLICHNGNFEKKFFRYHLPQIKNTIMDSMELAAILEPYHKEYNLNALMKTVTDMNKNEIHRGLDDSINTLKVVNSLLCRLWSSEEKKGKKRTLYENINKYYPYLKKWSWNKHLLKPPFFIYDDYDYVSYKDKKENETFLEPLKIDYKKYEELLKDEKIWNNGGDFGYTYRKNQLEFSKKIRENYEKGERIFIEAPTGSGKTFAYVIIAAIGTYLNSLKKRKDDASFIISTNTKELQNQLIERDIPNILKKLCLYDKLKFGAMKGKANYICIERLNKCDRLEGDEEGNLALLFLRRLAEKGEYGDIENISYFIVKRFNLERYFKDVTCDSDSCNLEKCIKPCYLRKRYNELPTENITVINHSLLACWPYTEKKKINHLIIDEGHNLMEKCYDFFAEKFTSSEFLESLDMIDKGHPNIIGLLLNLNASFGFRETIEKDKIMYLVNEIIVNLNILMNDFRSMRLVSGEYDFNTEFFIPRDDLKTMTKCLQPEISALKESIYPLYKMLNTYVSNIVLDDEVTGDNDYKNINDYIIKLKGTFDMLDKFLEASTFFAKVLEIDKEYDEFRLKTVPLNVGELVNEHMLKDVKSTTFLSATLRIENSFNRIKKHLGQEKANDFLIPPVFDLKKQTKIFALTDMGRYDDANYIKRISNFIYETSKKLSGHVLVLFNNNIRRNGVYEELEMLTRGSKIEVHTNKKSINILNDKNRQAIILGTKGFFEGIDVPGDGLSCVMLDKLPNHSPEYPILRAVTTYQHKMYQDFNYPQLCIKVKQIYGRLVRSTFDYGYFIILDPGENQYTLRNLQRDLGGPVIESTTSLKVLEGMESDYNNWKKRNLNIMIKKLQREKKDIGVEFEGESKKHKMFWELEGVENGIYNFKNINYELKGKL
>NZ_CP013239.1|WP_043853003.1|2418185_2419175_-|choloylglycine-hydrolase-family-protein
MCTALSIKADNGENFFGRNMDLAYEFNQCPMIIPRNYEIENKVTGEYLSNKYAIMAMGTIIDNHPALADGMNEKGLACAGLNFTGYGYFEEKPVEGKINIAPYDFIGWILSNHSTVDEVREELSNLELVNVPINDKTPVSILHWMITDKSGKSIVVEKTKDKFAVYNNPVGVMTNNPTFDWHLTNLNEYVKLSPDNPSDTSWSDKKLSPLGIGAGTLGIPGDFASVSRFVRIAYIRANMPSIENDIKAITQFFHMLDYVKMVKGGVITPDGLEDLTLYSSCMDQEKGIYYYKNYNNSRINAVDMNKEDLNAKEIKKFEYLTNQDINYQN
>NZ_CP013239.1|WP_071982643.1|2417762_2417990_-|hypothetical-protein
MKVKVLNIGIFALSFVCLLIAAKLFCNLGIYADEFNTSPDVVLGGKIELYMNWFMIGCVALICVLSGVNLFTRKK
>NZ_CP013239.1|WP_071982642.1|2415812_2417048_-|hypothetical-protein
MNRKKISRISGPISGIMSFMLTMGAITIPVCASETNGGNAVYEQSTKSDYSTYINKTEEKDGFKFTISKVEASRNRMLVTSLIECPKEITDDDFNNAIFMLTVKKSTCESNRTQTRVIDDKTFEVTFDVRSFEDFPPIAKLRFDVVIPRYNLNAWVNVEADISKNFNNIIEKDLYMRNDNERTTCSKMKTDILGTSLYFKEDEYNFDDVNYDNEYSESKILIKCDDKLYEFDDTDYNYNSGNGIEGKYTCSSLTYDILDNAKSVILIPLICNITNNEIQDIYNSSEYNEDDYINTNDNIRYKKKFKFDDGKDGEVTKVERSDDKVTFYINTDSEKKSMLMALGINGWAWNEEDRYNNSEPEKIIYKDPDSDHGYIIEFNNVSKDSNFNMWTDELILGYSSRFEIGNEVTVK
>NZ_CP013239.1|WP_071982641.1|2414554_2415784_-|hypothetical-protein
MINKKIGKIIGPVAGAMLFIATIGIMPVKAYAAETQILQNSTSNIENKNKSYETEQNGTKFKVSDIVGTRSKIKLNATITREDGINIDNHRNIEFRMYMENVDRSSSGTSWDSTDSKTVEIKKEMESEQGFPEKGIIRADLVMGEYDFNGSLVIPVDFTESFKQYVEKKLDVGVDNDTKITGFESDIIGTRVIVRKSVEDDERYGGYYDGKMDPIFIIKVGNKIYCAENISGYSYGDDDVYYTCSFDTEALTYNDIKDAEEISIIPVKCNLTYDEIRKKYNNDSYYEEMQNKKIVTDNVKYNKDIEFADGTKGSIKVERTGGNINIYCSSDSDINSFIAALGINGVFADEAYDSVYFEENKTIFKDEKQENQYVVQIKDSHPDMTCEVDMSVIYLFADKYELDDEIKIN
>NZ_CP013239.1|WP_003427296.1|2414036_2414369_-|PadR-family-transcriptional-regulator
MENITEMLKGVLEGCILEIISHEEIYGYEITRRLNALGFSDVVDGTVYTILVRLEKNKLVEVTKKKSDMGPPRKFFTLNDAGHEELEKFWSKWEFVSTRINKLKKYSVGD
>NZ_CP013239.1|WP_071982640.1|2413685_2414033_-|DUF1048-domain-containing-protein
MNFWDKITGNDITKEIKSFEFRVKKLPNDYQVEWEKIKSNIWEESDFSGRNIIPILEGVLSFLEERAADGLSVEVVLGEDMKEFCSELALEYNGKSFRDKWRKQLNSNISKKLGK
>NZ_CP013239.1|WP_003414226.1|2413388_2413676_-|DUF1048-domain-containing-protein
MSIKDIIKGKKEWRAHMARVKMLPKDYQIVYEEIQKYLFKAGPVELTEDIDLLVGIVDLFEEGAELQKNVLEVTGSDVAVFCDDLIKYSKTNTDI
>NZ_CP013239.1|WP_003414877.1|2412870_2413092_+|hypothetical-protein
MDDVRKIVLDNFYKNSKNTFRCPWQKAKILDSNEDSSVEENEYLIYFLGEYNDLKGVTVDKDTLEPTSFWDID
>NZ_CP013239.1|WP_071982639.1|2411104_2411719_-|DUF3267-domain-containing-protein
MKYIKKIPPTYSDFSNMLISTGWKKIKEPSNLNEAILQSIPFMIINGIIFMVIAYCIYPPIEEFINSKNSISITLNINIMTLIYIAITFLFMTIHELIHACFIPDFLKSDKTYWGINVLFGFVCTTEKIKKSRYIIISIMPFILLSIIFPLILSTFGLLNEFILFLCLLNAMGSCIDFLNIWNILRQAPNGSYIVNNGGETYYK
>NZ_CP013239.1|WP_027635864.1|2422938_2423433_-|hypothetical-protein
MENNKVINIKNKLFKSKNFDYSDCKIYTPEMVKKYKECFKFTMKVTKNHDKTLFIMYKKVEQWYMHENINWNMEKIHIKTKLGSYTSGGCGIEASLLAGLTASGVCTYMDTYMKKLSPLSLAIYAVAVLFFGMKVLADEDKTVEMYNMFLDVINELEEKNYSRK
>NZ_CP013239.1|WP_002580228.1|2423866_2424292_+|hypothetical-protein
MDDFGCINELNGDFNNLSNSINDLNNTLGMNNCVANAYDAGELNGMQSFGLISKQYQALIILLIILYWWTTQYTANYFMNSNSQLMNNVSCVLDKLVDNAVDCCSNCSGTAGDSEKKHHKHKKHRRCKCCCSDCDCDSDCC
>NZ_CP013239.1|WP_071982645.1|2424393_2425869_-|YdiU-family-protein
MKYINTSKEAGFKLENSYANLSSIFFTIQNPEHVPSPHLEVLNYSLAEKLGLDAKVLQSKEGVEILSGNKTLEGFTPISQAYAGHQFGYFTILGDGRAVLIGEHITPEGEKVDIQLKGAGKTPYSRGGDGKSSLGPMLREYIISEGMNGLGIPTTRSLAVVTTGENIIREAIMKGAILTRVAKSHIRVGTFEYAAKFGSVEEIRELADYTIERHFKELINEEKKYLLLLREVVKHQAHLIAKWQLVGFIHGVMNTDNMAISGETIDYGPCAFMDNYDPETVFSSIDVNGRYAYGNQPKIAVWNLARFAESLLPILHNDKNESVKLAQNEISKFIILYNENYLSGMRAKLGIFNEEENDEILINQLLNIMKKYNADYTNTFRSLTMDKTEDTELYGKEEFNNWYKMWQERLIRQKESKELSRELMRNNNPSVIPRNHLVEEALEAAVKNNDYTVMRKLLDAITKPYDYSVKNDYYVTVPKTSCGTYKTYCGT
>NZ_CP013239.1|WP_081366103.1|2425936_2426869_-|sensor-histidine-kinase
MYLRIPLVIILLTWFIWFLPLLAYMVLNYIKWSRYINNIRRVLEELDKKYLLPEVIDEPNFLLGEEINDVLRELSKNMHENVKHYRTEQEEYREYIEMWIHEIKTPIASSRLVIENNYNDVTRKIDYQIDRIDNFIEQVLYYTRSDEVSKDYIIKELELDSIVKKVVKKNYRDFISKKIKLEIEEIKETIYSDSKWVEFIVNQILVNSVKYTKEKEGVIKISANSQGNSVVLIIEDNGVGIIERDLDRIFEKGFTGENGRRFGKSTGIGLYLCKRLCDKLGLGLKLESKLNKGTKVRIIFPKDKVMKIYT
>NZ_CP013239.1|WP_071982647.1|2426946_2427618_-|response-regulator-transcription-factor
MRKIMIIEDEVIIREELKSFLSKYNYEVIAPSDFENVIEFILNENPDLILLDINLPIFDGYYICREIRKTSDIPIIIVTSRDSDMDELMSMNLGADDFVSKPYNTQILLARIAALLKRSGGSSNTSKYLIYNNFKINLSNATISWKDKEIELTKNEIKILSCLIENKGSIVSREILMEYLWKSDYFVDDSTLTVNITRLRRKLEGIGIKDAIETRRGLGYIMV
>NZ_CP013239.1|WP_071982648.1|2427666_2429694_-|ABC-transporter-permease
MYFKIALKNVKKSFKDYSIYFLTLTLAVCIFYSFNSMEAQQALIEMKNSGKEFMKTLTTIISGVSVFVAIILGGLILYANNFLIKKRNKELGIYMILGMGKSRISKIVILETIMVGFVSLFSGLILGFAASQGLSVLVSKLFEVKMDKYSFVLSTAAVGKTILYFGIMFLLVMIFNTYIISKYKIIDLLTVGRKTEEIKFKNPFIYLITFILCVCSLGGAYKLILDIGLKVEDPRFIISIILGIVGTVLFFFSLTGFVLYVVKRSKGIYFKGLNIFTVKQINSKVNTNFISMSVICLMLFVTIGMLSTGFSFKSALESGLKESTPFDASAYIYVYEDDDMVKSIGESLDRLGVEFNSEDKVAYYNQYASKDLFKDVFKLDNSSDNIVTKVMYIKLSDYNKLREISNEKPISLKEDEVIITSNFSNAVTYMEDYMKNNNTINLCGKNYNIKDNEIVEHNLKTEMIKNNLCTIVVNDEVCNDLEVVSSVVNVNFANKEDERKFLDDIKKVMKIRTEGTSASIEETEAIKDLSLVFVNTRESIYEENRGATTTVLFVGIYLGIVFLVSSMAILALQQLSEASDSVDRYVSLKRLGVSRNSINKTIFTQTLIYFSLPVILALVHSIVGIQVANDFISLYDKPDIGGSALITAGILLGVYIVYFYTTYIGYKNIVKSRIK
>NZ_CP013239.1|WP_043661751.1|2429683_2430451_-|ABC-transporter-ATP-binding-protein
MRNILKVDKIEKYYGNRGNITKAIDNISFNVDEGEFVGIMGPSGSGKTTLLNCISTIDTVTTGDIIINDKDITKLKSKKLDKFRQNELGFIFQDFNLLDTLTAYENIALALTIKGEKTSAIDSKIKEVAKYLDIEEVLNKYPYQMSGGQKQRVASARAIVTDPALILADEPTGALDSKAARLLLERFDSLNKELNATILMVTHDAFTASYSHRILFIKDGRIFTELVRGNDTRKEFFNRIIEVITLIGGDDNNVF
>NZ_CP013239.1|WP_071982650.1|2432433_2433366_-|glycyl-radical-enzyme-activating-protein
MLKNQINYEKKGNVFNMQRFSINDGPGLRTIVFLKGCPLSCIWCSNPESQNKNSQVMFNIKNCTVCGNCKEICSVHAIDIDSKYRIDRSKCINCGKCIEECYSEALVMCGKEMTVYDVIKELKKEDVIFRCSKGGVTLSGGEPLMQPEFSIELLKACKSLGWHTTMETTGYADESVIEDVMPWVDLLLMDFKTIDESMHFKYTGVSNKIILENAKKIVNLVPEVIARVPVIPGFNADESSINAIAKYVKELERIKEVHLLPYHRFGVNKYACIGRKYAIDHKVKSPDNDTMVKFKNIVESYGLKCNIGDN
>NZ_CP013239.1|WP_071982651.1|2433443_2435843_-|glycyl-radical-protein
MSNLEKGFDNISERVGRLKEEILSAVPCVEADRAILVTESFKETEDQPIIIRKAKALEKILNEIPITIRDSELIVGSLTKNPRSAQVFPEFSSKWLVKEFDRIGKRISDSYQISDEVKSQLIETFKYWEGKTVSELAASYMPEETVTAMNSNVFTVGNYFFNGLGHYAVDYGKVLEKGFSGIIAEVEETMEHSEKTDPEYIKKREFWNAVIISCKAAINYAERYSKLAKELADQESNIERKNELIKIAEICNNVPKNGAESFYEAIQSFWFVQAIISLESNGHAISPARFDQYMYPYFKKDIDSKVIDMSIAQELINCLWVKFNDISKVRDEIVTLAFSGYGMFQNLIVGGQTSEGRDATNELSYMCLEATGEVKLPQPSLSVRIWSKTPQEFLLRCCELTRLGLGFPAFYNDEVVIPCLVDRGINLEDARDYGIVGCVEPQCSGKTDGWYDAAFFNLAKVLEMTINNGKEIGPKTGEFESFKTFDEFIEAYKKQMKYFVGQMVSADNSVDLAHRERAPLPFVSCMLDDCIAKGKSIQEGGAHYRSSGPLGVGIANVGDSFMAIKKLVFEENKITLADLKAAIDSDFGNKEDDEIKKNKYKNIKQILLNRSPKFGNDIDEVDELTRLGALIYCKEVEKYTNQRGGKFLPGLYPVSNNVHLGDQVGATPDGRNASEPIADGVSPTRGLDTHGPTAAANSVAKLDHFIAASGTLFNQKFTPTSLAGDNGLRNLASLVRSYFEEKGMHVQFNVVNKQILIDAQKHPEQYRDLVVRVAGYSAQFVCLDKGVQDDIIARTEQAF
>NZ_CP013239.1|WP_071982652.1|2436213_2437200_-|N-acetylmuramoyl-L-alanine-amidase
MSKFLISVGHTASGQTGCGAVGLLDESNCTREIAPLVVKKLQSLGHTAIKLQIDSGSSTDYVTRVSQANSEGGDYFVEIHLNAGGGTGCEVYTTNGSSASSLAQKVSSSIASNLGITNRGYKTSSGLYVLNHTSMAAMLIECCFVDNEIDYKAYNAEIIASAIVEGLTGQSIVYGNGTWIADNNGWWFKYSDGTWPTGWAKLPIGNNNSNLGWFLFDSKGYMKTQWENPDGNWYYLGEDNDGRARQNEWAYDSKASKWYYFNDNCAMVQSKWIKYKNEWYYLNRDGSMATGWLQDGSKLYLLYSNGVMAHDTVLYGYKFDSNGVAYKI

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Crispr_ID: NZ_CP013239_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013239_5

2682766-2682963

Orphan

Consensus_repeat	Method
ACTCACATTCATTCATTGGGTAAGTTCGACTAGCCAAATATAAAATTTGGAGTCTCACTT	PILER-CR
TAAGTTCGACTACCAAATATAAAATTTGGAGT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP013239_5

>merge|NZ_CP013239|5|2682766-2682963|PILER-CR,CRISPRCasFinder
ACTTATATCCATTCATTGGGTAAGTTCGACTAGCTAAATATTTCTTAATGAAGCTAACTTCTTTCAGTCGTTAGCTAAGTTCGACTACCAAATATAAAATTTGGAGTGTCGCTTTGCTCCTTTTTTTAAGGAAACCCGACTCACATTCGTTCCCTGGGTAAGTTCGACTAGCCAAATATAAAATTTGGAGTCTCACTT

>NZ_CP013239|5|1|2682766-2682963|PILER-CR
ACTTATATCCATTCATTGGGTAAGTTCGACTAGCTAAATATTTCTTAATGAAGCTAACTT	CTTTCAGTCGTTAGCTAAGTT
CGACTACCAAATATAAAATTTGGAGTGTCGCTTTGCTCCTTTTTTTAAGGAAACCCGACT	CACATTCGTTCCCTGGGTAAGTTC
GACTAGCCAAATATAAAATTTGGAGTCTCACTT

>NZ_CP013239|5|5|2682841-2682956|CRISPRCasFinder
TAAGTTCGACTACCAAATATAAAATTTGGAGT	GTCGCTTTGCTCCTTTTTTTAAGGAAACCCGACTCACATTCGTTCCCTGGGT
AAGTTCGACTAGCCAAATATAAAATTTGGAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013239.1\|WP_003426572.1\|2687736_2688630_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP013239.1\|WP_071982776.1\|2672948_2674289_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240543
NZ_CP013239.1\|WP_033128062.1\|2692883_2693117_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_002580482.1\|2678971_2679337_+\|YccF-domain-containing-protein	unknown	unknown	gnl\|CDD\|236975
NZ_CP013239.1\|WP_002580485.1\|2682300_2682579_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP013239.1\|WP_035763789.1\|2693274_2693739_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071982778.1\|2679393_2680833_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP013239.1\|WP_045144185.1\|2690092_2690773_-\|membrane-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_002580494.1\|2692028_2692475_-\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
NZ_CP013239.1\|WP_071982779.1\|2680845_2682285_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP013239.1\|WP_003406298.1\|2691057_2691795_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP013239.1\|WP_002580491.1\|2688739_2689771_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_046057616.1\|2676809_2678543_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|272915
NZ_CP013239.1\|WP_003406245.1\|2686264_2687350_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236329
NZ_CP013239.1\|WP_003411183.1\|2671797_2672829_-\|anaerobic-sulfite-reductase-subunit-AsrA	unknown	unknown	gnl\|CDD\|237890
NZ_CP013239.1\|WP_027635723.1\|2675100_2676114_-\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|379231
NZ_CP013239.1\|WP_071982777.1\|2674437_2675025_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240048
NZ_CP013239.1\|WP_002580481.1\|2678535_2678829_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|236174
NZ_CP013239.1\|WP_003406209.1\|2685568_2686051_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071982780.1\|2693931_2697618_-\|choline-binding-protein-A	unknown	unknown	gnl\|CDD\|311610

Protein	Function_ID	Function_description	E-value
NZ_CP013239.1\|WP_003426572.1\|2687736_2688630_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.57846e-62
NZ_CP013239.1\|WP_071982776.1\|2672948_2674289_-\|MATE-family-efflux-transporter	gnl\|CDD\|240543	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	6.85979e-127
NZ_CP013239.1\|WP_002580482.1\|2678971_2679337_+\|YccF-domain-containing-protein	gnl\|CDD\|236975	PRK11770, PRK11770, YccF domain-containing protein.	6.47047e-47
NZ_CP013239.1\|WP_002580485.1\|2682300_2682579_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	1.1079e-18
NZ_CP013239.1\|WP_071982778.1\|2679393_2680833_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP013239.1\|WP_002580494.1\|2692028_2692475_-\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	1.62104e-42
NZ_CP013239.1\|WP_071982779.1\|2680845_2682285_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP013239.1\|WP_003406298.1\|2691057_2691795_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.80787e-07
NZ_CP013239.1\|WP_046057616.1\|2676809_2678543_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|272915	TIGR00118, Probable_acetolactate_synthase_large_subunit, acetolactate synthase, large subunit, biosynthetic type. Two groups of proteins form acetolactate from two molecules of pyruvate. The type of acetolactate synthase described in this model also catalyzes the formation of acetohydroxybutyrate from pyruvate and 2-oxobutyrate, an early step in the branched chain amino acid biosynthesis; it is therefore also termed acetohydroxyacid synthase. In bacteria, this catalytic chain is associated with a smaller regulatory chain in an alpha2/beta2 heterotetramer. Acetolactate synthase is a thiamine pyrophosphate enzyme. In this type, FAD and Mg++ are also found. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed. [Amino acid biosynthesis, Pyruvate family].	0
NZ_CP013239.1\|WP_003406245.1\|2686264_2687350_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|236329	PRK08664, PRK08664, aspartate-semialdehyde dehydrogenase; Reviewed.	0
NZ_CP013239.1\|WP_003411183.1\|2671797_2672829_-\|anaerobic-sulfite-reductase-subunit-AsrA	gnl\|CDD\|237890	PRK15055, PRK15055, anaerobic sulfite reductase subunit AsrA.	0
NZ_CP013239.1\|WP_027635723.1\|2675100_2676114_-\|FUSC-family-protein	gnl\|CDD\|379231	pfam13515, FUSC_2, Fusaric acid resistance protein-like.	1.84164e-07
NZ_CP013239.1\|WP_071982777.1\|2674437_2675025_-\|NUDIX-domain-containing-protein	gnl\|CDD\|240048	cd04692, Nudix_Hydrolase_33, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	3.00276e-29
NZ_CP013239.1\|WP_002580481.1\|2678535_2678829_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|236174	PRK08178, PRK08178, acetolactate synthase 1 small subunit.	2.44935e-34
NZ_CP013239.1\|WP_071982780.1\|2693931_2697618_-\|choline-binding-protein-A	gnl\|CDD\|311610	pfam07745, Glyco_hydro_53, Glycosyl hydrolase family 53. This domain belongs to family 53 of the glycosyl hydrolase classification. These enzymes are enzymes are endo-1,4- beta-galactanases (EC:3.2.1.89). The structure of this domain is known and has a TIM barrel fold.	3.19099e-65

>NZ_CP013239.1|WP_002580485.1|2682300_2682579_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MKVTIDEVKYIGKLAKLNFSDEEAEKFAGEFEGILENFKYLNELDLEINEDEKKELKPIVRKDEVKKFECTDLFRNVKDKQDTYIRVPKIIE
>NZ_CP013239.1|WP_071982779.1|2680845_2682285_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MKLTLKEMVSKIKSRELTSEELVSYYLKNLLEKEPKVNGFLTVMADEALAKAKEIDNRIANGEKLGALAGIPIGIKDNICTEGVKTTCASRMLEDFVPPYNATVVKKLLEEDAVIIGKTNMDEFAMGSSTENSAFKKTANPRDLSRVPGGSSGGSAAVVAADMCPVSLGSDTGGSIRQPASFCGVVGLKPTYGLVSRFGLVAFGSSLDQIGPFSQNVEDSAYMLNIIAGTDLYDSTSIRELKHIDYTESLKDGVKGMKIGVPEEFFGEGLDEEIKEAVKKSIEILKENGAEVEMFSLPIMKDGLAAYYIISSAEASTNLSRYDGVRYGYRPEKFDSVDELMEKSRTEGFGQEVKRRIMIGTYALSSGYYDAYYNKADKFRTKLKHDLSKTFKKYDLILGPVSPVLPFKLGEKNSDPLAMYLADIYTINVNLAGIPAISIPGGVSKEGLPIGIQLMGDMLCEEKIFKAAYSLEQSLKVEL
>NZ_CP013239.1|WP_071982778.1|2679393_2680833_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MNLETVIGLEIHAELKSKTKIFCSCSTKFGAKPNENTCPICTGVPGTLPVLNEEVVNLAIKAGTALGCKINKFNKMDRKNYFYPDLPKNYQTSQFDIPICSGGTVEYDYEGKHVKVRLNRIHIEEDAGKLVHVEGEPISLIDYNRVGVPLAEIVSEPDMRSVGEAVEFLRILKSILEYSEVSDCRMEQGSLRCDANISLRPVGSKEYGTKVELKNINSFRELEKALKKEEKRQRELISFNEGHKIVQETRRWDAAKGKTISMRSKEQAHDYRYVVEPDLPPIIIYDNQIEEIRKSLPEMPDEKRERFLNEYKLSEKEVEILISDIVLSRFFESVVKEGITPKMGANWILGDILRILNEKKLDTDQMPLNAENFAKLLKVVNEGKISNNIGREVLDEIFDENKNPMKIIEEKGLMQISSTDELEKLIDEVIAANPQSVEDYKAGKTQSAGFLMGQVMKKSQGKANPKVCKELIDEKLSKL
>NZ_CP013239.1|WP_002580482.1|2678971_2679337_+|YccF-domain-containing-protein
MSCLGNIIWFIFGGFFNALGWFACGIFWCITIIGIPIGIQCFKMGKLQLAPFGKEVIDSESSGLTSFVLNILWIIFGGFELCIANLLSALLLCITIVGIPFAAQSLKMAKLSLMPFGKEII
>NZ_CP013239.1|WP_002580481.1|2678535_2678829_+|acetolactate-synthase-small-subunit
MINTNFYLIELLVRNHAGVMSHITGLFARRAFNLEGILCAQVGDGTTSKMFLLVKNDFVLDQIIKQLEKLYDVLEVAIHQDYDVSVFKNLDKVLKIN
>NZ_CP013239.1|WP_046057616.1|2676809_2678543_+|biosynthetic-type-acetolactate-synthase-large-subunit
MKYNGAEIVIKLLENQGVEYISGIPGGFNLPIYDALYKSKIKHILARHEQGAGFIAQGISRTTDTAGVCFATSGPGATNLLTAIADAKLDSIPLVAITGQVPLSSIGTDAFQEVDAYGLTIPITKHNFLVRNIHDLFTIIPEAFRIALEGRPGPVLVDIPKNIQTQVIELETFPDSAYSQSNRSETENYDDTINNDNINKCNKKIFKRSTLECMAELINNSHRPIIYAGGGVIRANASKELCEFAKKNSIPVTLSLMGLGAFPSDDILNLGMLGMHGAPYTNYLMNEADLILAFGIRFDDRATGNIQKFCPNASIIHVDIDPSEINKVKNSNLSMVADIKEFLKEMIPLINSKTRLSWIKRVGCFKEKYPLPSYENPLHPANIIPYIASKVSSDTIISTDVGEHQMWTAQRYPFKKPKTLLTSGGLGTMGFGLPVAIGASLVNTDKTILCFSGDGSILMNIQELATLADFNLNVKVIILTNHHLGLVRQQQNLFYNEHYIASQFISNPDFATIAKGFGINSCDLATENDPLKKLDEILSKSGPWVINIPIEECENVLPMVAPGKSNLEMIGSGELND
>NZ_CP013239.1|WP_027635723.1|2675100_2676114_-|FUSC-family-protein
MKKKIISKTLTFICILLFISLFNHIFGDANSPVGITTVIAVLILMSENLTVSPIKNFMKLLLINIIIGMGAFIASQNIYWGVIIDFSVLWFIGYYFSVNLTKTIILPFGLQYLFILYDPVYGENLIKRFGALAFAPFLIMLIQYFIYGRNKKIEVEKSDILEFGKSDDTYEKVKILGREFKVNKIRAYYALRLSLLIAITAFINGRFILPNGIQEGKWMVYSIFSLTELFGENCRIKSKKRIQGTIIGALIVLVLFMFIKSTPLRGLIVLVAGYLNSYFEDYRDTMVCVTVSVVASVALTNGTLLTAIERILFVSIGILISLIGNKLIFSDFKKGEI
>NZ_CP013239.1|WP_071982777.1|2674437_2675025_-|NUDIX-domain-containing-protein
MEEMIDIYDENFNKIGVKSRVDVHKYGFKHKVVQCYIINKIDNVKWIYFQQRSFDKDNYPGFYDIACAGHIDSGEEASSSMIRELQEEIGLRVEKSQLNYAGTKLENKNHGNILDDEICELYVLSIENENFFLGEEVEDMVKVLFNDYKSWVNEEYKVLKVFSINSKKYIELNEKNICEHIRDYNKNLLKVIENI
>NZ_CP013239.1|WP_071982776.1|2672948_2674289_-|MATE-family-efflux-transporter
MSKDMTIGNPSKILFYFAIPMVLGNILQQLYNIVDSMIVGNFVGADALAAVGASYPITFVLITVANGAGIGCGVVISQYFGGKMLEKVKTSIFTSIIFISIFSCILMVLGIIFADWILSVMNTPENIFYDSSSYMKIYFMGVVFLFIYNIVTSCFNALGNSKTPLMFLLCSAFLNILLDLLFVIKFNMGVRGTAFATLISQGISALLSLSFLLKQIKMIKTDNTVKKFDIRILKKISKIAVPSILQQSIVSIGNLFVQALVNSYGAVVIAGYAAATKIDSITILPMSNMSNAVSTFTGQNIGAGKIERIKKGYKSALIMIGIFCVFAASLLFLAGHQLIGMFVDSVSNQGVITIGTQYLKIVSVFYFFMGLMVITNGVLRGSGDMKIFLASTLTNLSTRIIFAYGLASFIGQGAIWWAVPFGWIFASTVSVIRYKSGKWKKKCMVN
>NZ_CP013239.1|WP_003411183.1|2671797_2672829_-|anaerobic-sulfite-reductase-subunit-AsrA
MGYKLTFTEVNELFNKLSKDYKIYAPKRFEKEGRYSDTDIIRYAQVNCVEDIVFEEKSTYPPKEVLTPVSQTLYYYTGKDIRECSKNDNKKILIFARPCDINAQKRQDRIYLDNGGFEDQFYKDVREKVKFICIECVEGFDTCFCVTMKSNKTDDYCIAVRVLKDGMLLNVKDDVFYKYFEGNKEEEFKLKFIEKDNAPVRLPDIKDTYILEKLIKHPMWEEYNGRCVECGSCTIACSTCTCYTTRDIVYDSEGNIGERKRVEASCHIGGFDEMAGGHRFRVTAGQKMRYKVLHKVHDYKQKFGDNHMCVGCGRCTDRCPQYISMTATINKVSDAVAEIMEEK
>NZ_CP013239.1|WP_003406209.1|2685568_2686051_-|hypothetical-protein
MFIDFNDIMFGLRNGRYVYIGSGSSREVYDLENGYVVKVAKNKAGIEQNRAEYYISANDSSGIFAKVIEASSDYGLLIMRKAKKIKDIRFVWNYFNAGNKHEFYESPHMQRLKNKYKLLLGDFEKASSWGIIKGRPVIIDYGFTRYVERKYYRRFYEEDL
>NZ_CP013239.1|WP_003406245.1|2686264_2687350_-|aspartate-semialdehyde-dehydrogenase
MEKKLRVGIIGATGMVGQRFACLLENHPWFDIVALAASKRSSGLTYEEAVGDRWKMPTAMPEKYKKMVIMDADNVEEVCSKVDFVFCAVSLNKEETKKLEERYAKCETPVVSNNSANRHTDDVPMIIPEINGEHAKVIESQRKRLGTTRGFIAVKPNCSIQSYVPALNALKEFGLEEVVVSTYQAISGAGKTFNEWPEMLDNVIPYIGGEEEKSEIEPLKIWGTVENDIIVDAKTPVISAQCIRVPVLDGHLATISVKFKNKPTEKQIIDAWNNYKASDMVLNLPSAPKQFIRYMEEDNRPQTHLDRDYANGMGISMGRLREDKIFDYKFVGLSHNTLRGAAGGGVLSAEYLTAAGYITAK
>NZ_CP013239.1|WP_003426572.1|2687736_2688630_+|LysR-family-transcriptional-regulator
MDFKQLNAFLTISKLQSFTKAADALGYAQSTITTQIKLLECELDVKLFERIGKTTTLTHEGKKLLPYAKQILKLSTDIKSTVSNENKPTGTLTIGAAESLCVLRLPEILKEYKHLYPDVDVSLKFGSCADFRHYLSENLIDVAFSLGVKIDSDEFISDVELKEPMLLLAYPGHDLINKKEIFPTDIKDESLILTETGCSYRAAFERILKDNGIKPNITLETGSVQAIKQFTMSGLGITFLPEIAVKDEVKAGKLIPLNWAGPDLNIISQVIYHKDKWISPALKEFISLSHRFLKQNL
>NZ_CP013239.1|WP_002580491.1|2688739_2689771_-|hypothetical-protein
MKYIKRFVAWAILSLIIQVGALFILDRVIFKQSSAFESKKIELDKPYEDKINIKIPKDADEIKVSYNGKYMSYSKGDKLNMIETKSGKDKSIETENKGEVMYYEWLYERDMIVILEKVNKKGKDKIQLVTYNPKNSATTLVTEICDFKSGMKIKNVTESVFTSVYYVYVSNNEGYDRCYRIDINNDKFDVPLKGAGMENMKVIPHKDRLIYDDVVNSSIYATSPNTKLKFNTNNKLRLIGIDRNDVIYIGEVSGDKISGIVYGKIDESTSKWNSIKLDSPANSSDIFFNSKSEIMVNNILEEKIKNITTGKEYPYTGKFIDVKDDFIALDDNGKLVFQKIKEN
>NZ_CP013239.1|WP_045144185.1|2690092_2690773_-|membrane-protein
MESLALKNVVVIISYFLIYIYVLRYIQCYSWGALKMISRSVYKIFSMIGAPAHEAAHAVAALIFGFRITNINIFKHVKFMAPSNLRGIIGGFVVSIAPAVFNIIIFTVICSKSDNIYFNFVMFLILISCIAPSNSDIKGMLPVMIIGIIIIVVVTYALGWAVPSINVYIKNSILLVGKFYALYLAVLTIIVTIKGCFINRTINPFYILKLYKNLVVNGLTIMAKAS
>NZ_CP013239.1|WP_003406298.1|2691057_2691795_-|tetratricopeptide-repeat-protein
MENNEIQKKIDLFLNEHKIKIQGGQINTEKDMSLLLSRIAKSEIDKGNYEKGLYFAVNSFKFDKKNLYSVFLQGLGFRFTGQYEDAIKAFKYCNSRKHDLASLANIGFCFAELKDSEKALDIFNKIIENITEEEESNNAQLMALVYECMGNIYLSREDVLEFDSTDKLKINYKLAVKYYKNSLRLNRVNHVLLNKLAACYYHFDDERKALYCYEEAVKVAPEEKNYEEAVKELRNAGVIPDVVEF
>NZ_CP013239.1|WP_002580494.1|2692028_2692475_-|Hsp20/alpha-crystallin-family-protein
MFGLIPIRTNNATDKGGALSDFFNDFFNDDFLSPMGIGIDMSKFNADVRETENEYLVCAELPGVNKNDINLDFKNNNLIITAKREEVHDDSKDSYIRKERSYGQFSRSFYFDNVKQDKIRAKFENGELKVILPKELKSKENSSNIFIE
>NZ_CP013239.1|WP_033128062.1|2692883_2693117_+|hypothetical-protein
MEINFSKVHEEKEMYAVLKASVINGKEIESQLLGIYESEYDVKKAKKKLSVDGHKTVVKVKVHIDPIEYLGDIDNIK
>NZ_CP013239.1|WP_035763789.1|2693274_2693739_-|hypothetical-protein
MQVNLSDLIEAMEFENDMLSHYYNKDTGVIIYKEDMETASYFAEDIDRVDSMEEWEKELIEGLYDLKKNPENYIKLPDKEQLNELKIMINFCSSFSDIELPKLEEFNDEGKMLHEVKNIIRNKGLINEWYDYREYSEREIAIEWCKKNNIQYIE
>NZ_CP013239.1|WP_071982780.1|2693931_2697618_-|choline-binding-protein-A
MKKNITKNTSILTLLMYLIASNGVQAIVDDDSINNSQEQTEKVINENYFIDNNEDEPSENKKGTFYNSDENNVLLNSKNKEDISNYMQTKVTTESQVIANEDSTDNYVLNGDFTNGINNWTINGETSSANVKWIDDEYEYGLNYWMDQKLDNDQKPTMFNIDTYQTLVGLEKGSYELSFYVNSGEFNELYVYVKDGELVTKKEISPSGNMTKVTLQFQAKSNNLTIGFYGKGASGLSWANFDNVEINKAEVIDNTGKIINPDFEYNLDGWETTGTSSIVKWNGDWGNSNTKGCLNYGWYDGDGEYETDTHQTITGLENGTYTVKAYAQSSGEQKELYFYAKGFDKDNKEKIVRENITDAHNFRITLLEVEVTNGQMTIGFHAKGGKEEWANFDEITISKKSEDKRKSLDVIENFTFEDGLKGWNVIGNKDSVQALKGSGYNDSSYLKFEDSKSYEGKVEQTITGLENGHYKLEFYAKSNGGQQNIYGYVKDTGKSEARTSVPVDNNYRKVVVDFEVLDGQATIGFYSKSSNYSWSIIDNVKLYKVNEGYTMLKGGDLTELNYVESTGAVFYDKDGNPRDPFHILAENGFNFARLRIYNKTGRDSSHKYEDGSEFYLPDGYQNKEDMLKLAKRAKDVNMQIELTLHYSDWWTNGLVHDIPVEWEEAIKGLDEEEAVSKLEGFVYDFTYDVMKSLKDQGTLPEYISLGNEMQGGLLYPFGKVDNMETLAKFLNAGAKAVRDVSNTTKIILHLDEAGDNNRYYKLLDGCEKYNVDYDIIGPSYYPYWTRNSVEQIIPWCNDLYAKYGKKIIFMETGYNWNPTVPDGSKPGQLVDNGNESHASTPQGQKEFMDELFNGMRNADDNCIVGDLYWDPIMINHEGIGWAIAKGAADDGSEDIVDENVVSNTTLFDFNGKALKSLNSYKDNTEGTNYGMISGIITDSKGNIIDNAEVTVSINGDIYKRTSDKYGRFFINNLKETDDGTIVVTRTGYISANDKFKIKSGEISSIELSLKKKSSSSSGGSSSGNRDSSTIQDNSVDSSNTLSNNITESEGKIVINENGNKEIWINGEKKVNAWVEIDGKWYRTGEAGEVIKGWIKDNDSWYYLNNEGDMRTGWLNDNNKWYYLNKTGNMNTGWFKEDEKWYYLNESGEMKTGWLNKNDKWYYLGEAGDMRTGWVKDGSLWYYLSDDGSMKTGWINSNDNWYYLDESGKMIIDSIIDGYKINSQGELFN

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Crispr_ID: NZ_CP013239_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013239_6

3635104-3635212

Orphan

Consensus_repeat	Method
TTTTAGAAATCATTTATATGAAGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013239_6

>merge|NZ_CP013239|6|3635104-3635212|CRISPRCasFinder
TTTTAGAAATCATTTATATGAAGTTACGTGATATCAATTGAAAATTTTTATTTCTTCATTCGATTTTCTAGGATTACTTATTCTTTTTAGAAATAATTTATATGAAGTT

>NZ_CP013239|6|6|3635104-3635212|CRISPRCasFinder
TTTTAGAAATCATTTATATGAAGTT	ACGTGATATCAATTGAAAATTTTTATTTCTTCATTCGATTTTCTAGGATTACTTATTCT
TTTTAGAAATAATTTATATGAAGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013239.1\|WP_071983047.1\|3640114_3640789_-\|competence-protein-ComEA	unknown	unknown	gnl\|CDD\|213597
NZ_CP013239.1\|WP_071983040.1\|3630688_3630898_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_104675536.1\|3632330_3633260_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP013239.1\|WP_071983038.1\|3628814_3629621_-\|FRG-domain-containing-protein	unknown	unknown	gnl\|CDD\|378073
NZ_CP013239.1\|WP_071983045.1\|3637016_3638372_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NZ_CP013239.1\|WP_024040329.1\|3624022_3625150_-\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|274033
NZ_CP013239.1\|WP_071983041.1\|3631116_3631752_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP013239.1\|WP_071983049.1\|3643236_3644511_-\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_CP013239.1\|WP_071983043.1\|3635246_3635480_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_081366100.1\|3627684_3628800_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008
NZ_CP013239.1\|WP_071983039.1\|3629877_3630519_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071983037.1\|3626417_3627581_-\|DUF2971-domain-containing-protein	unknown	unknown	gnl\|CDD\|378585
NZ_CP013239.1\|WP_002582208.1\|3642304_3643210_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP013239.1\|WP_003407063.1\|3633217_3633895_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP013239.1\|WP_071983048.1\|3640956_3642198_+\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_CP013239.1\|WP_071983044.1\|3635473_3636967_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP013239.1\|WP_071983042.1\|3634086_3634986_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_071983046.1\|3638939_3639641_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013239.1\|WP_002582204.1\|3638511_3638919_-\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP013239.1\|WP_071983050.1\|3644793_3645357_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224627

Protein	Function_ID	Function_description	E-value
NZ_CP013239.1\|WP_071983047.1\|3640114_3640789_-\|competence-protein-ComEA	gnl\|CDD\|213597	TIGR01259, ComE_operon_protein_1, comEA protein. This model describes the ComEA protein in bacteria. The com E locus is obligatory for bacterial cell competence - the process of internalizing the exogenous added DNA. Lesions in the loci has been variously described for the appearance of competence-related pheonotypes and impairment of competence, suggesting their intimate functional role in bacterial transformation. [Cellular processes, DNA transformation].	2.35533e-28
NZ_CP013239.1\|WP_104675536.1\|3632330_3633260_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.18196e-46
NZ_CP013239.1\|WP_071983038.1\|3628814_3629621_-\|FRG-domain-containing-protein	gnl\|CDD\|378073	pfam08867, FRG, FRG domain. This presumed domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterized.	2.53977e-21
NZ_CP013239.1\|WP_071983045.1\|3637016_3638372_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	1.67291e-123
NZ_CP013239.1\|WP_024040329.1\|3624022_3625150_-\|rod-shape-determining-protein-RodA	gnl\|CDD\|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	1.15346e-112
NZ_CP013239.1\|WP_071983041.1\|3631116_3631752_-\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	4.68031e-30
NZ_CP013239.1\|WP_071983049.1\|3643236_3644511_-\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	5.99431e-47
NZ_CP013239.1\|WP_081366100.1\|3627684_3628800_-\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	9.03561e-13
NZ_CP013239.1\|WP_071983037.1\|3626417_3627581_-\|DUF2971-domain-containing-protein	gnl\|CDD\|378585	pfam11185, DUF2971, Protein of unknown function (DUF2971). This bacterial family of proteins has no known function.	4.13899e-05
NZ_CP013239.1\|WP_002582208.1\|3642304_3643210_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	4.32226e-102
NZ_CP013239.1\|WP_003407063.1\|3633217_3633895_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	8.36379e-12
NZ_CP013239.1\|WP_071983048.1\|3640956_3642198_+\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	1.04939e-75
NZ_CP013239.1\|WP_071983044.1\|3635473_3636967_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	6.7928e-35
NZ_CP013239.1\|WP_002582204.1\|3638511_3638919_-\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	5.45585e-06
NZ_CP013239.1\|WP_071983050.1\|3644793_3645357_-\|HD-domain-containing-protein	gnl\|CDD\|224627	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism].	4.5448e-65

>NZ_CP013239.1|WP_071983042.1|3634086_3634986_-|hypothetical-protein
MKSKKLKAKLLIDTVKLEVQSNNLYCYESVTDDYSFIKNGTVNDEIRQDGIYKKLVISPNMITGEYVPILSIDGFVNSMEEIFEIIGVVEIDKISMRRIDIAVDLDIDYIECFKKILFLFELITLEENKSDRWYTTNLNTLKSNSLILKGRSIEICFYNKKEESCGKHYAPTRFEFRFKRVSSKNYIIHINKVRNIVNTMDFSIVKLEENMTERLIVLWNSENKEVKSFSEFVRKYDRYFYTIRILENVYRKTGLSGNCTNWVKKFRNNNNLMFFTKSDVKIFKCEVNKAIKEYIKGVQ
>NZ_CP013239.1|WP_003407063.1|3633217_3633895_-|helix-turn-helix-domain-containing-protein
MSKRISNEVKLITVKNITDNRVSLRDAARSLGVAYQSIQKWITIYKGFGIEGFNKRNGNHKYTSELKEQAVTDYLSGNSSLMDICIKYKIRSHNQLLNWILKYNSHNKLKASETGGINIMTKGRTTTYKERIEIIKYCIENENNYAETAEKYRVSYQQVYSWIRKYQTQGIEALQDGRGKRKKESEMSELEKLKAKNKLLEAENRRQLMEIEFLKKLDEVERRRF
>NZ_CP013239.1|WP_104675536.1|3632330_3633260_-|IS3-family-transposase
MPKKARRGRKEAILSQVRNESIYITIQELHDEKAFPILELCEFAGIARSAYYKWLKRNESSNELFNQNLLPLIKDAYEEKQGILGYRQMTIKLNREHEFNVNPKRIYRLMSILNLKSVCRKKKRNYKKSQPQITAENILNRDFYSNKFGEKWLTDVTEMKYGLGGKAYLSAILDLADKSIVSFEIGHSNNNDLVFKTFDTAHKKYPGAKPLFHSDRGYQYTSKKFKEKLDGANMTQSMSRVSRCIDNGPMEAFWGMLKSEMYYLKKFNSYNELETAIIEYINYYNNYRYQKRLKCMTPLEYREYLESVA
>NZ_CP013239.1|WP_071983041.1|3631116_3631752_-|recombinase-family-protein
MYFQYIRVSDNDQNEDRQLEALKKYCDSEKIHVEQNNIFIDKKSGKNFDRPNYIKMKNSLRKNDVVIIYELDRLGRDKQMIKEELMYYRDKSIRVIILDIPTTRMDLSAMEDGVAKAMLDMINNVLIEVLATISEEERKKIRKRQAEGIAIAKAKGVYTGRKSITREDLPKNFSKLYKQWSNNEISATQFAKLIDVKSRTTLYKYIGIYKQ
>NZ_CP013239.1|WP_071983040.1|3630688_3630898_+|hypothetical-protein
MKIYLNDIIDVHTAAFNFDNNEEELFENIVFDTINDEILYDDFSLYIDENILIKYYTNIMFKFIEILLQ
>NZ_CP013239.1|WP_071983039.1|3629877_3630519_-|hypothetical-protein
MLMGNEKKSTNNELKFFIERVRGGLECIKDDLNIYTEAKKQLDDNFADYIALSRCIYDICMLYMDFNIVDNKTVEVLCNIKAEKHLEELKLLLITSVENDEEVNYIEELKQDIQYYEQRDIFIELNEIACKLTSINSRGIHKSLLVDYAENINRFMKKDCISRKQLLNDFMSKYFSCNDVIENIKNFYFNYKELRERITMNLYELINSKENTI
>NZ_CP013239.1|WP_071983038.1|3628814_3629621_-|FRG-domain-containing-protein
MAIKEIIINNFEEFNTNIRELYGKGFTFFRGDKVIGGNTENLLLTSFDKKKAGDYIYNNECADDMINDFISVSLSKLNYRPTNYFEKMLTAQHYGIPTRLQDWSESPLVSLFFGTSNSKNLNDDDYIIIWCLNPLELNSKTRQIVMDSTNNTYIPNISLDANQESALGHIERYYGTDTRIDESAFPIAIRTFKINPRIEAQKGVFLIYPRTRKSLIEFEDADKYLVKFIIKKELAEELEELLCMWKINNYQLFPEISSIALDVIKNYK
>NZ_CP013239.1|WP_081366100.1|3627684_3628800_-|DUF262-domain-containing-protein
MNMDIKKYEINPKVDSKTLSTIVEEIDKYYDKKPGGIEIKPEYQREYKFKPQDESLLIESFLLGIPIPSVYLSSDASNEFFYSKVIDGFHRLKAIYRFIKNEFKLVKLEKLIDLEDRSFKELPIYIQNILLYQRTLSIVVIPTQDDKSIELEIFKRYNKGTHPLSAQEIRHALYNSKANSWMNNILKDYYENEELSNLREIYHITKKRFVNKIVHENLAVILGIFTFGLNEEWTTSPEYAEHFMKYAYDNDENKEFSLENLQKEYNLFNEFLLYLRQEKNVEYPFSKELYGTKTHNYKLQVPILMIVSAFFNEVYNDNINNERKYITFDFIYMTLQLLKNSYLEDNFKGSSTRPKMLKDTLESLINEYKKL
>NZ_CP013239.1|WP_071983037.1|3626417_3627581_-|DUF2971-domain-containing-protein
MSNRELEENDDESIYYYTSNYVLIEWLKNEQIWATRSVSSNDASDTIYITKYFSKLADTYDKNLLKKCEDILNISKNMSLRLYKDILKDFMETKFDEFKTVIKLADNFYKAINSNVYISPEVNNEIFKRVDGNIGVFNVRGNEINQIVFREILKKLSEEEIKKYFQIDCNISNELIEKLSLLSYPYIISFSFSGDDRFLWDSYTNNNGICLEFSKKDITEYWENKYGKKYEEEELMGPMFNHIFYEDSKQIEALNKILNELVKSKISHKDEFLSLIASLFKSSYWKSENEFRAVFPVKYFENKIFNVKENYNLKYNNQYKTQDYIEVDIPIKLVKSITVGPLNSKDNLRECISKELLKVKNDDEIKYLLNVFDKKVKESIGTNKVKN
>NZ_CP013239.1|WP_024040329.1|3624022_3625150_-|rod-shape-determining-protein-RodA
MFRQFKLDRRIFKDIDKTILFSMISIVLYGIFNIYLCTKGGVNAGCATKQFVWLLISLVVLYIFLAVDYSVIMNYVPLFYWGAVLLLIGTTFFGSVVNGARGWIRFGPVSLQASEVAKIGIILMLGKKLDEMDGKINDTKNFFILVFYCAVPVIFILKQPDMGMTMVCFFIVLGIFYVSGLDLKIIGGGLVSLVIGIIVVWNSGFIEQYQKNRLIAFVNPTAYETDTGYHLIQSLTGIGSGGLFGSRPSITSEVAMGYAAQNVPEVHTDFIFAAIAEQWGFIGAMFLLVLYGCMLYKMIAIARTAKDIFGSVICVGIISYFLFAIIQNIGMTISLLPITGITLPLVSYGGSSLLTTILSIGLVLNVGMRRKKIHF
>NZ_CP013239.1|WP_071983043.1|3635246_3635480_+|hypothetical-protein
MKINRIFSTEQGIDLQNIVKSMITQSVNNKISNYLSEFNAKENTIEGGLIIDSNNIVDYNFTNNHTTSSKKGDVIKC
>NZ_CP013239.1|WP_071983044.1|3635473_3636967_+|recombinase-family-protein
MLRCAAYIRVSKNKEDQNTSIINQKKLLSQYAEEQGWTITEFYTDIKSGTSTERKNLKRLIRDCEAKKIDVILSKELSRLARNVELAHKIKRILENNSTHLVTLDGAINTFTGDRMLFGLYAWIYEQEASKTSERIKYSLGARAKQGLFNGSVAPMGYECINSKLFVRDDETPAIVQRIFSEYMTGRGYDSIAIGLYNNDIPTPSMIAGKANANDKWHGGTVRKILQNRAYIGEMVQLKEQTISVTSKKRNKTNSENIVIIENTHEAIISREDFAIVQELIKIRTRQKVHQSTHLFTNIMFCEDCGKGMHFKKNRRGYVCGSFNKFGKKACSDHIVREAELSNLILKDIKDFILSVKTTDLFDEFKFSLDKLASTQKSILNRYNSELVALSSRKSKALNKLLDDIIEKADYDYIIKDINIKIEDLKVKISEVNKNLDKIKGNFILNEIAKIKKESIVPTELTPELLHRFVKRIEITESGDAKVFYRFTPDEVTAINS
>NZ_CP013239.1|WP_071983045.1|3637016_3638372_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MRRGSDLQVKIEKLQFPSTGIGHAEDKIIYVKNAFPGQTVTGRVKRKREEYADVKLLQVDERADYEIQAPCPHFGVCGGCSSQSLPYEKQLEFLSEEVKALFDEAGVPTGEYLGIQGSPTQFEYRNKMEFTFGDEAKGAPLGVGMHMIGKSFGIVTVDQCMLIDEDYRKVIRLTVDYFREQNLPYYRIMKAEGYLRHLVIRKAKNTGELLVNLVTTTQIDFDLSDYVKLLRNESYDGRLVSIIHTENDSKSDAVIPEKVNVLYGKDYIREELLGLEFNISPFSFFQTNTKGAEQLYSMVRDFMGDSENKVVFDLYCGTGTIGQIVAPKAKKVVGIELIEEAVEAAKENAKLNGLENCEFLAGDVAEIIKNVKDKPDIIILDPPRSGVHPKALDYVIKFNAPEIIYVSCNPKTLVTDLEVLTQKGYKVVQTKVKDMFPNTPHAETCVKLIKR
>NZ_CP013239.1|WP_002582204.1|3638511_3638919_-|RDD-family-protein
MEKDNVKENETEVNTDEKEENSVELSKEHEENTNNELQDLIEDHEEVDSKENNKPSFGKEIFANLLDQFVILAGSSVILLIADVVMRMFGYQFVRETGILVAVVMCVYFVINCFYVQLMERTKLKNTIAKKILNL
>NZ_CP013239.1|WP_071983046.1|3638939_3639641_-|hypothetical-protein
MSKKIVSIFMSLIVAASLAGCGKSTDENSSNAKTANPTESANNAVTNEQAEGKWAQNYTLDETKKLYEEKLSKMKEITEELGVKYSSDEVIKKEDDKTITDKSIYFDNENPENNKIESMYYGLKIYGENLEEGVISLKLTLKFDGENAVKNNDLDLGKTSFAKYIAAFTGEADRDYSDINKEILEKLASGDTEVRINNTIDGLNEEILASKDCIFYKLSTKKYKFADAEMSME
>NZ_CP013239.1|WP_071983047.1|3640114_3640789_-|competence-protein-ComEA
MKDNFLKYKKIGLMSILAIVVIVSVIFYNAKGFKQLNKNNTESIFVDDDNLVFENGKEDKLPSQDSVNMSKQMESKLEDKTIVVEIKGQVKKPDVYTIDENSIINDLIDLAGGVTENADLSNINRAKKLQNHEMIYIADKNDSNNDYPQATNMENGSMDNEILVDINTATTDKLKTLNGIGDSKAKSIIEYREQNGGFKSIEEIKNVTGIGDKMFEKIKESITV
>NZ_CP013239.1|WP_071983048.1|3640956_3642198_+|D-alanyl-D-alanine-carboxypeptidase
MKRYFKFLSMLLLFLCIPLTVHAETAKPEINAQGCALIDASSGTILYGKNEDCTFEPASTTKVMTALVVLDKCKLTDEVTIQENFTSVDGTAIGLLKGDVVTVHDLLLGLLMESGNDCANELAYHVSGSIDSFAQLMNEKAKELGATATSFRNPSGLPDPEHLTTPHDLALFLREAIKNQDFLDIAQTPYATITMINNPERTIIINNKNYMINKNSKYYYQYALCGKNGYTTKANHTYVSSAEKDGHILIASFLNAMDKNQNFFDMQSVFNYGFDNYSFVKLYDKGQEVAQYDVTKNLTVPLLINKTLEYPVLKGDESSLSFDIKVNDEDLSKKSFNKDENILTGTIYVNDKKLETVDLASGVSRTYESPLSTEAFSNNPKIPIYIAVSIAGIAIIVGLGIFIKKKFSINGKH
>NZ_CP013239.1|WP_002582208.1|3642304_3643210_-|RluA-family-pseudouridine-synthase
MSILEKKVTGIEEGTKIREYLKMEMGLSTRLIRSASIDKRIFVNDIPVKMNRVINEGEVIKIDLAKDESQDIAPEKMDIEIIYEDEDILVVNKKPFMVVHPTKSYQSGTLANGVINYFMESGQNCIVRLVSRLDMNTSGLIIIAKNQFSHGMLSKEMTENKVTKRYLAVVHGILENEEGTIDRPIYRPEGIDFGIMRIVDERGQRSITHYKVIEKYENASLVECTLETGRTHQIRVHLSSIGHPIYGDSLYGSGDEEQDLISRQALHAYSLDFRSPRTGEILSLKSNLPEDIKTLIEKIKK
>NZ_CP013239.1|WP_071983049.1|3643236_3644511_-|LCP-family-protein
MGRKDKKKKRFNKGNDGTNKFEKITLGVISLFLTFTVFSIISGFIALMEVGSQSMPKASNPSGNKPVNILLLGMDIGDPNQEDNKDIKRTDTIMVVNYNPETDKITTVSVPRDTLIQNNGNSVKINSAFAIGGYSRIKTEVEGLLNVNINYIVKVDYDAFVDIIDAIGGVKMKIERNMIYDDEGQNLHINFKAGETVKLDGQKAQEFFRWRKNNDGSGFANGDLDRIQNQQKFIAKVIDKCTNPLIVFRIPKIMSAIGNNVETNMSPFSIIKYGLKFMGVSNNDISMLTAAGTPKTINGQSFLVFDKNSNKDIISQLASSEVSSQSENGISRENIKIKILNATKINGLASELKINMNNLGYTKIDTGNTELSDKTVILSNNKNMLKTISKDLDIKNSGKKDDKAEYKDYDVIIILGKDFKKFGE
>NZ_CP013239.1|WP_071983050.1|3644793_3645357_-|HD-domain-containing-protein
MLSIEEIREYLKSNLKESRYNHTLGVCETSIKLAELNGISIEKAEIAALAHDVAKNLDKEEMLKIINENNIELSNVEKENMNLWHSIIGPIVAEEKLGITDEDILNAVRWHTTGKENMSVLVKIIYIADMIEPGRSFPGVEEIRKETFENLDKGVYLGLTHSIKFLLSKNLLIDENTMKARNYFLFK

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013239_1	1.1\|811964\|34\|NZ_CP013239\|CRISPRCasFinder	811964-811997	34	NZ_CP006904	Clostridium botulinum 202F plasmid pCBI, complete sequence	36038-36071	6	0.824
NZ_CP013239_1	1.1\|811964\|34\|NZ_CP013239\|CRISPRCasFinder	811964-811997	34	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	135934-135967	6	0.824
NZ_CP013239_1	1.1\|811964\|34\|NZ_CP013239\|CRISPRCasFinder	811964-811997	34	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	91830-91863	6	0.824
NZ_CP013239_1	1.1\|811964\|34\|NZ_CP013239\|CRISPRCasFinder	811964-811997	34	NZ_KJ776578	Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence	19610-19643	8	0.765
NZ_CP013239_1	1.1\|811964\|34\|NZ_CP013239\|CRISPRCasFinder	811964-811997	34	NZ_KJ776580	Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence	24421-24454	8	0.765

1. spacer 1.1|811964|34|NZ_CP013239|CRISPRCasFinder matches to NZ_CP006904 (Clostridium botulinum 202F plasmid pCBI, complete sequence) position: , mismatch: 6, identity: 0.824

aagataatggaacttggtactacttaaatgcatc	CRISPR spacer
aaggtaatggaacttggtactatttaaatgatga	Protospacer
***.******************.*******

2. spacer 1.1|811964|34|NZ_CP013239|CRISPRCasFinder matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 6, identity: 0.824

aagataatggaacttggtactacttaaatgcatc---	CRISPR spacer
aagataatggaaattggtactatttaca---atctaa	Protospacer
************ *********.*** *   ***

3. spacer 1.1|811964|34|NZ_CP013239|CRISPRCasFinder matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.824

aagataatggaacttggtactacttaaatgcatc---	CRISPR spacer
aagataatggaaattggtactatttaca---atctaa	Protospacer
************ *********.*** *   ***

4. spacer 1.1|811964|34|NZ_CP013239|CRISPRCasFinder matches to NZ_KJ776578 (Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence) position: , mismatch: 8, identity: 0.765

aagataatggaacttggtactacttaaatgcatc	CRISPR spacer
atgataatggaacatggtactacttagataacaa	Protospacer
* *********** ************.**.

5. spacer 1.1|811964|34|NZ_CP013239|CRISPRCasFinder matches to NZ_KJ776580 (Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence) position: , mismatch: 8, identity: 0.765

aagataatggaacttggtactacttaaatgcatc	CRISPR spacer
atgataatggaacatggtactacttagataacaa	Protospacer
* *********** ************.**.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

736288 : 816161

Bordetella_phage(10.0%)

protease,tRNA,transposase,integrase,holin

attL 773093:773111|attR 797485:797503

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071982134.1\|736288_737299_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_071982135.1\|737388_738573_+	amidohydrolase	NA	NA	NA	NA
WP_004452383.1\|738657_738840_+	hypothetical protein	NA	NA	NA	NA
WP_003408445.1\|738836_740018_+	ATP-binding protein	NA	NA	NA	NA
WP_003408453.1\|740074_740785_+	response regulator transcription factor	NA	NA	NA	NA
WP_003413820.1\|741262_742705_+	diguanylate cyclase	A0A2D0W9J3	Bordetella_phage	6.4e-06	30.8
WP_002582464.1\|742981_743248_+	metal-sensing transcriptional repressor	NA	NA	NA	NA
WP_071982136.1\|743302_745753_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.3e-112	37.1
WP_002582462.1\|745805_746012_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_071982137.1\|746162_747368_-\|tRNA	alanyl-tRNA editing protein AlaX-L	NA	NA	NA	NA
WP_003413769.1\|747694_748207_+	putative ABC transporter permease	NA	NA	NA	NA
WP_071982138.1\|748370_749636_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	34.8
WP_003408449.1\|749778_750711_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_003413862.1\|750703_751489_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_003408488.1\|752221_752899_+	hydrolase	NA	NA	NA	NA
WP_003413771.1\|753566_754862_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_003413882.1\|755339_755906_+	signal peptidase I	NA	NA	NA	NA
WP_003413763.1\|756077_756644_+	signal peptidase I	NA	NA	NA	NA
WP_002582452.1\|756752_757301_+	signal peptidase I	NA	NA	NA	NA
WP_003408481.1\|757476_757695_+	DUF3006 domain-containing protein	NA	NA	NA	NA
WP_071982139.1\|757722_759834_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	H8ZJI5	Ostreococcus_tauri_virus	8.8e-105	40.3
WP_003413783.1\|760087_762265_+	AAA family ATPase	A0A1V0SET7	Hokovirus	1.8e-07	24.1
WP_003413825.1\|762811_763630_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003408403.1\|763911_764571_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_002582446.1\|764557_765280_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.2e-34	40.0
WP_071982140.1\|765669_767724_+	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	9.9e-45	26.2
WP_071982141.1\|767787_768963_-	cation transporter	NA	NA	NA	NA
WP_071982142.1\|769416_770301_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_003413844.1\|770650_771127_+	HD domain-containing protein	NA	NA	NA	NA
WP_002582441.1\|771233_772040_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	2.2e-24	32.6
WP_071982143.1\|772097_772910_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
773093:773111	attL	NA	NA	NA	NA
WP_071982144.1\|773282_774275_+\|transposase	transposase	NA	NA	NA	NA
WP_003413834.1\|774666_775953_+	M18 family aminopeptidase	NA	NA	NA	NA
WP_003413766.1\|776364_778050_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_003408437.1\|778716_779778_+	hypothetical protein	NA	NA	NA	NA
WP_071982145.1\|779818_780832_+	glycoside hydrolase family 5 protein	NA	NA	NA	NA
WP_071982146.1\|781057_790537_+	glycosyl transferase	NA	NA	NA	NA
WP_002582432.1\|790713_791310_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_071982147.1\|791629_792412_+	EAL domain-containing protein	NA	NA	NA	NA
WP_071982148.1\|792705_794436_+	PAS domain-containing protein	W8CYF6	Bacillus_phage	4.0e-15	26.1
WP_071982149.1\|794846_796631_+	MBL fold metallo-hydrolase	Q332C0	Clostridium_botulinum_C_phage	1.7e-21	29.6
WP_003413781.1\|796950_797178_-	hypothetical protein	NA	NA	NA	NA
WP_071982150.1\|798114_799455_+\|protease	collagenolytic protease	NA	NA	NA	NA
797485:797503	attR	NA	NA	NA	NA
WP_071982151.1\|799850_801050_+	PspC family transcriptional regulator	NA	NA	NA	NA
WP_071982152.1\|801146_802340_+\|holin	choline-binding protein	NA	NA	NA	NA
WP_003413814.1\|802769_804599_+	cell wall-binding protein	NA	NA	NA	NA
WP_003408407.1\|805151_806864_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA
WP_003413749.1\|807436_809317_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA
WP_003413797.1\|809507_810056_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA
WP_071982153.1\|810213_812130_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA
WP_003413836.1\|812569_814327_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA
WP_071982154.1\|814592_816161_+\|protease	collagenolytic protease	NA	NA	NA	NA

DBSCAN-SWA_2

835798 : 841520

Clostridium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002582394.1\|835798_836269_-	hypothetical protein	A0A2I6PE92	Staphylococcus_phage	9.6e-20	38.6
WP_003407040.1\|836316_836913_-	helix-turn-helix transcriptional regulator	A0A0A7RTR3	Clostridium_phage	2.9e-21	42.5
WP_003407047.1\|837083_837401_+	phage antirepressor Ant	A0A090D834	Clostridium_phage	2.0e-21	56.1
WP_071982159.1\|837661_838696_+	DNA replication protein	A0A2H4JF78	uncultured_Caudovirales_phage	4.0e-42	36.7
WP_002582389.1\|838747_838966_-	DUF2922 domain-containing protein	NA	NA	NA	NA
WP_002582388.1\|839101_839326_-	DUF1659 domain-containing protein	NA	NA	NA	NA
WP_035789513.1\|839679_840579_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	4.9e-81	54.6
WP_003407113.1\|840833_841520_+	capsular polysaccharide biosynthesis protein	A0A1X9I5E1	Streptococcus_phage	2.9e-17	27.9

DBSCAN-SWA_3

1422785 : 1449160

Clostridium_phage(59.09%)

protease,head,terminase,tail,integrase,portal,capsid

attL 1421722:1421738|attR 1450441:1450457

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1421722:1421738	attL	NA	NA	NA	NA
WP_071982330.1\|1422785_1424390_-	recombinase family protein	A0A1L2BY67	Clostridium_phage	9.4e-192	63.3
WP_070780188.1\|1424484_1424982_-	ImmA/IrrE family metallo-endopeptidase	A0A1L2BY64	Clostridium_phage	5.3e-37	46.1
WP_071982331.1\|1425087_1426176_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_070780186.1\|1426272_1427097_-	hypothetical protein	NA	NA	NA	NA
WP_070780185.1\|1427315_1428398_-	endonuclease	A0A1S5SAB0	Streptococcus_phage	7.0e-74	39.8
WP_070780184.1\|1428479_1428818_-	helix-turn-helix transcriptional regulator	A0A1L2BY72	Clostridium_phage	1.1e-25	55.1
WP_070780183.1\|1429355_1429796_+	helix-turn-helix transcriptional regulator	A0A1L2BY71	Clostridium_phage	3.4e-19	38.2
WP_003415188.1\|1429834_1430014_+	hypothetical protein	A0A1L2BY76	Clostridium_phage	3.6e-12	67.3
WP_003415165.1\|1430073_1430259_+	hypothetical protein	NA	NA	NA	NA
WP_071982332.1\|1430471_1431227_+	ParA family protein	H7BUL8	unidentified_phage	2.4e-28	32.5
WP_071982333.1\|1431211_1432336_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_071982334.1\|1432352_1433225_+	helix-turn-helix domain-containing protein	A0A1L2BY83	Clostridium_phage	7.1e-61	51.7
WP_071982335.1\|1433211_1433547_+	hypothetical protein	A0A0S2MVE6	Bacillus_phage	4.0e-12	37.6
WP_071982336.1\|1433539_1433695_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_071982337.1\|1433709_1433898_+	hypothetical protein	NA	NA	NA	NA
WP_002580980.1\|1434008_1434197_+	hypothetical protein	NA	NA	NA	NA
WP_071982338.1\|1434214_1434346_+	aspartyl-phosphate phosphatase Spo0E family protein	NA	NA	NA	NA
WP_071982339.1\|1434501_1434777_-	hypothetical protein	NA	NA	NA	NA
WP_071982340.1\|1434950_1435244_+	hypothetical protein	A0A0A8WF31	Clostridium_phage	4.4e-07	35.1
WP_071982341.1\|1435284_1435524_+	hypothetical protein	NA	NA	NA	NA
WP_071982342.1\|1435548_1435827_+	hypothetical protein	NA	NA	NA	NA
WP_071982343.1\|1435846_1436080_+	hypothetical protein	NA	NA	NA	NA
WP_057089251.1\|1436196_1436586_+	hypothetical protein	A0A0A7RTL7	Clostridium_phage	5.7e-18	38.9
WP_071982344.1\|1436780_1436963_+	hypothetical protein	NA	NA	NA	NA
WP_071982345.1\|1436971_1437598_+\|integrase	tyrosine-type recombinase/integrase	A0A1J1J900	Escherichia_phage	2.0e-65	63.1
WP_071982346.1\|1437880_1438189_+	HNH endonuclease	R9TNN2	Paenibacillus_phage	5.0e-25	55.8
WP_071982347.1\|1438278_1438650_+	hypothetical protein	A0A1L2BY96	Clostridium_phage	1.2e-44	70.7
WP_071982348.1\|1438646_1440311_+\|terminase	terminase large subunit	A0A1L2BY93	Clostridium_phage	2.2e-276	80.0
WP_071982349.1\|1440326_1441481_+\|portal	phage portal protein	A0A1L2BY94	Clostridium_phage	7.0e-181	77.1
WP_071983100.1\|1441483_1442215_+\|protease	Clp protease ClpP	R9TLM7	Paenibacillus_phage	2.6e-56	50.0
WP_071982350.1\|1442211_1443429_+\|capsid	phage major capsid protein	R9TQG7	Paenibacillus_phage	8.3e-23	26.7
WP_071982351.1\|1443467_1443755_+	DNA-packaging protein	A0A1L2BY95	Clostridium_phage	5.1e-32	75.8
WP_071983101.1\|1443750_1444077_+\|head	phage head closure protein	NA	NA	NA	NA
WP_071982352.1\|1444076_1444577_+	hypothetical protein	NA	NA	NA	NA
WP_071982353.1\|1444573_1445041_+	hypothetical protein	NA	NA	NA	NA
WP_071982354.1\|1445045_1446134_+\|tail	phage tail sheath protein	A0A090D804	Clostridium_phage	2.5e-18	25.0
WP_071982355.1\|1446148_1446577_+\|tail	phage tail tube protein	A0A2H4J032	uncultured_Caudovirales_phage	9.7e-11	33.1
WP_071982356.1\|1446628_1447063_+	hypothetical protein	NA	NA	NA	NA
WP_071982357.1\|1447264_1449160_+	hypothetical protein	A0A1U9WQS5	Geobacillus_phage	3.9e-35	30.6
1450441:1450457	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1570941 : 1581098

Prochlorococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003415514.1\|1570941_1574688_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	4.2e-33	24.6
WP_002579500.1\|1575010_1575490_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.3e-27	43.7
WP_002579501.1\|1575489_1576197_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SLB8	Cyanophage	2.1e-47	44.8
WP_002579502.1\|1576304_1577717_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-55	32.8
WP_003409659.1\|1577808_1578813_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.5e-67	45.4
WP_003409633.1\|1578800_1579409_+	phosphoribosylglycinamide formyltransferase	R9S626	Prochlorococcus_phage	2.9e-24	38.0
WP_002579505.1\|1579589_1581098_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	1.8e-35	46.0

DBSCAN-SWA_5

2047737 : 2056525

Paenibacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071982507.1\|2047737_2050239_+	DEAD/DEAH box helicase family protein	A0A2K9V3E9	Faecalibacterium_phage	3.4e-31	30.5
WP_071982508.1\|2050403_2050859_+	cell wall-binding protein	NA	NA	NA	NA
WP_081366076.1\|2051122_2051848_+	recombinase family protein	A0A0C4UR34	Shigella_phage	1.3e-10	30.3
WP_003406134.1\|2051899_2053483_-\|transposase	IS1182-like element ISClbu1 family transposase	Q9MBP7	Staphylococcus_prophage	4.2e-59	31.3
WP_104675536.1\|2053637_2054567_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.2e-101	77.3
WP_003407063.1\|2054524_2055202_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.7e-63	56.3
WP_071982509.1\|2055343_2055781_+	hypothetical protein	NA	NA	NA	NA
WP_071982510.1\|2055829_2056525_+	DUF4145 domain-containing protein	A0A1L2JZ52	Aeribacillus_phage	4.3e-32	35.8

DBSCAN-SWA_6

2605354 : 2610766

Clostridium_phage(28.57%)

integrase

attL 2599576:2599592|attR 2622471:2622487

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2599576:2599592	attL	NA	NA	NA	NA
WP_071982750.1\|2605354_2606065_-	hypothetical protein	S5MP04	Brevibacillus_phage	3.9e-25	42.9
WP_002580419.1\|2606094_2606334_-	AbrB family transcriptional regulator	A0A2I7SC16	Paenibacillus_phage	1.8e-11	44.6
WP_071983113.1\|2606388_2607036_-	ATP-binding protein	Q0H276	Geobacillus_phage	4.0e-32	40.2
WP_071982751.1\|2607064_2608135_-	DnaD domain protein	V5UQV4	Oenococcus_phage	6.8e-21	41.6
WP_071982752.1\|2608379_2608682_-	histidine kinase	NA	NA	NA	NA
WP_033128322.1\|2608768_2608999_-	DUF739 family protein	A0A0A7RTP5	Clostridium_phage	5.0e-14	56.8
WP_033128321.1\|2609152_2609635_+	helix-turn-helix transcriptional regulator	A0A0A7RTR3	Clostridium_phage	7.3e-23	54.6
WP_071982753.1\|2609662_2610766_+\|integrase	site-specific integrase	A0A0U3U8Y8	Bacillus_phage	3.0e-16	27.5
2622471:2622487	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2679393 : 2739139

Bacillus_phage(28.57%)

tRNA,transposase,integrase,coat,holin

attL 2710215:2710231|attR 2742328:2742344

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071982778.1\|2679393_2680833_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_071982779.1\|2680845_2682285_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_002580485.1\|2682300_2682579_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_003406205.1\|2682961_2684251_-\|tRNA	aspartate--tRNA(Asn) ligase	A0A1V0SJ84	Klosneuvirus	2.9e-66	34.6
WP_003406209.1\|2685568_2686051_-	hypothetical protein	NA	NA	NA	NA
WP_003406245.1\|2686264_2687350_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_003426572.1\|2687736_2688630_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002580491.1\|2688739_2689771_-	hypothetical protein	NA	NA	NA	NA
WP_045144185.1\|2690092_2690773_-	membrane protein	NA	NA	NA	NA
WP_003406298.1\|2691057_2691795_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_002580494.1\|2692028_2692475_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_033128062.1\|2692883_2693117_+	hypothetical protein	NA	NA	NA	NA
WP_035763789.1\|2693274_2693739_-	hypothetical protein	NA	NA	NA	NA
WP_071982780.1\|2693931_2697618_-\|holin	choline-binding protein A	NA	NA	NA	NA
WP_002580498.1\|2697870_2699091_-	hypothetical protein	A0A1X9I5Z9	Streptococcus_phage	1.9e-88	49.2
WP_071982781.1\|2699326_2700493_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003426369.1\|2700608_2700953_-	hypothetical protein	NA	NA	NA	NA
WP_081366086.1\|2701162_2703478_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.3e-20	28.3
WP_002580502.1\|2703464_2704169_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.7e-36	35.5
WP_071982782.1\|2704640_2705549_+	phosphodiester glycosidase family protein	NA	NA	NA	NA
WP_071982783.1\|2705563_2706577_+	bifunctional glycosyltransferase family 2/GtrA family protein	NA	NA	NA	NA
WP_003426360.1\|2706649_2707189_-	cysteine hydrolase	NA	NA	NA	NA
WP_003406267.1\|2707497_2707635_+\|coat	spore coat associated protein CotJA	NA	NA	NA	NA
WP_002580507.1\|2707649_2707910_+\|coat	spore coat protein CotJB	NA	NA	NA	NA
WP_002580508.1\|2707913_2708312_+	hypothetical protein	NA	NA	NA	NA
WP_002580509.1\|2708446_2708905_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_043853068.1\|2709056_2709827_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_071982784.1\|2709868_2711101_-	redoxin family protein	NA	NA	NA	NA
2710215:2710231	attL	NA	NA	NA	NA
WP_003414538.1\|2711198_2711537_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003406229.1\|2711563_2712061_-	hypothetical protein	NA	NA	NA	NA
WP_002580514.1\|2712076_2713453_-	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	9.1e-103	44.1
WP_071982785.1\|2713520_2713835_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	1.9e-19	49.0
WP_043853070.1\|2713963_2714824_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_071982786.1\|2715446_2717048_+	recombinase family protein	A0A1L2BY67	Clostridium_phage	2.4e-107	42.2
WP_002580519.1\|2717058_2717304_+	hypothetical protein	NA	NA	NA	NA
WP_003409120.1\|2717526_2718051_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_002580521.1\|2718476_2719112_-	DUF3793 family protein	NA	NA	NA	NA
WP_035763447.1\|2719136_2719547_-	flavodoxin	NA	NA	NA	NA
WP_002580523.1\|2719752_2720637_-	DMT family transporter	NA	NA	NA	NA
WP_071982787.1\|2720735_2721365_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_033127852.1\|2721386_2721920_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_035763448.1\|2722162_2723677_+	sodium/proline symporter PutP	NA	NA	NA	NA
WP_002580527.1\|2723744_2724551_-	hypothetical protein	A0A2K9VH60	Faecalibacterium_phage	2.2e-24	34.7
WP_002580528.1\|2724822_2725878_-	hypothetical protein	A0A2H4J162	uncultured_Caudovirales_phage	4.2e-07	47.4
WP_024041080.1\|2726042_2726705_-	hypothetical protein	NA	NA	NA	NA
WP_002580530.1\|2726707_2726908_-	hypothetical protein	NA	NA	NA	NA
WP_002580531.1\|2727103_2727982_-\|integrase	tyrosine-type recombinase/integrase	A0A1B1IQT7	uncultured_Mediterranean_phage	7.1e-08	19.2
WP_003415137.1\|2728073_2728706_-	stage II sporulation protein M	NA	NA	NA	NA
WP_002580533.1\|2728954_2729581_-	cytidylate kinase-like family protein	NA	NA	NA	NA
WP_002580534.1\|2729605_2730310_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_027635897.1\|2730311_2731079_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.2e-13	24.3
WP_071982788.1\|2731081_2732128_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_002580537.1\|2732138_2733023_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_071982789.1\|2733115_2734294_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_071982790.1\|2734643_2735675_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.0e-05	34.4
WP_071983117.1\|2735934_2736420_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_158021624.1\|2736937_2737108_-	hypothetical protein	NA	NA	NA	NA
WP_081366087.1\|2738441_2738813_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.4e-29	53.5
WP_043665124.1\|2738866_2739139_-\|transposase	transposase	A0A1P8CWP5	Bacillus_phage	4.0e-10	38.4
2742328:2742344	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2964923 : 2972793

Clostridium_phage(83.33%)

plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003409171.1\|2964923_2965685_-	N-acetylmuramoyl-L-alanine amidase	J9QED4	Clostridium_phage	1.5e-14	33.5
WP_003409132.1\|2965943_2966198_-	hypothetical protein	NA	NA	NA	NA
WP_071982866.1\|2966216_2967386_-	hypothetical protein	S6B1J7	Thermus_phage	1.1e-08	32.3
WP_071982867.1\|2967406_2968012_-	YmfQ family protein	A0A0A7RTU9	Clostridium_phage	2.1e-51	47.3
WP_071982868.1\|2968028_2971256_-	hypothetical protein	A0A0A7S1G0	Clostridium_phage	3.3e-26	48.6
WP_071982869.1\|2971277_2972348_-\|plate	baseplate J/gp47 family protein	A0A0A7RUN3	Clostridium_phage	1.7e-56	37.8
WP_071982870.1\|2972364_2972793_-	DUF2634 domain-containing protein	A0A0A7S0E2	Clostridium_phage	9.3e-14	34.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013238

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP013239

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection