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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017839 Nocardia seriolae strain EM150506 chromosome, complete genome 4 crisprs c2c9_V-U4,PrimPol,WYL,cas3,RT,cas14j,PD-DExK,csa3,DEDDh,cas4,c2c10_CAS-V-U3,DinG 0 0 31 0

Results visualization

1. NZ_CP017839
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017839_1 3840423-3840504 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017839_2 6136924-6137038 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017839_3 6943037-6943110 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017839_4 7057116-7057216 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 430932 : 487806 59 Planktothrix_phage(18.18%) integrase,transposase attL 448548:448566|attR 477435:477453
DBSCAN-SWA_2 720632 : 775286 53 Mycobacterium_phage(33.33%) tRNA,transposase,protease NA
DBSCAN-SWA_3 792017 : 803384 8 Macacine_betaherpesvirus(100.0%) NA NA
DBSCAN-SWA_4 886049 : 958649 59 Gordonia_phage(13.33%) tRNA,integrase,transposase attL 887171:887199|attR 894196:894224
DBSCAN-SWA_5 1474893 : 1583618 59 Pike_perch_iridovirus(16.67%) bacteriocin,tRNA,transposase NA
DBSCAN-SWA_6 1638799 : 1693075 52 Acinetobacter_phage(40.0%) transposase NA
DBSCAN-SWA_7 1809992 : 1937442 117 uncultured_Mediterranean_phage(16.67%) transposase NA
DBSCAN-SWA_8 2033629 : 2145374 101 Staphylococcus_phage(14.29%) transposase NA
DBSCAN-SWA_9 2329421 : 2418345 67 Planktothrix_phage(28.57%) integrase,transposase,protease attL 2341703:2341719|attR 2392372:2393744
DBSCAN-SWA_10 2670015 : 2791443 107 Mycobacterium_phage(23.53%) integrase,transposase attL 2731473:2731532|attR 2737282:2738644
DBSCAN-SWA_11 2810592 : 2860126 45 Synechococcus_phage(20.0%) tRNA,integrase,transposase attL 2822493:2822552|attR 2858988:2860127
DBSCAN-SWA_12 2869835 : 2912508 37 Bacillus_phage(66.67%) transposase NA
DBSCAN-SWA_13 2983882 : 3049687 54 Prochlorococcus_phage(100.0%) transposase NA
DBSCAN-SWA_14 3076707 : 3156570 57 Klosneuvirus(28.57%) tRNA,integrase,transposase attL 3113436:3113495|attR 3125975:3127115
DBSCAN-SWA_15 3222954 : 3305009 87 Gordonia_phage(50.0%) integrase,transposase attL 3222228:3222278|attR 3240399:3240449
DBSCAN-SWA_16 3353507 : 3433782 58 Streptomyces_phage(40.0%) tRNA,transposase NA
DBSCAN-SWA_17 3721549 : 3802225 86 Bacillus_phage(33.33%) integrase,transposase attL 3769097:3769156|attR 3801087:3802227
DBSCAN-SWA_18 3918023 : 3968043 44 Staphylococcus_phage(33.33%) transposase,protease NA
DBSCAN-SWA_19 4012135 : 4064345 49 Bacillus_virus(33.33%) transposase NA
DBSCAN-SWA_20 4196130 : 4251851 49 Cedratvirus(28.57%) transposase NA
DBSCAN-SWA_21 4691755 : 4735623 34 Tupanvirus(25.0%) integrase,transposase attL 4692293:4692311|attR 4738188:4738206
DBSCAN-SWA_22 4770778 : 4779587 10 Pseudomonas_phage(100.0%) transposase NA
DBSCAN-SWA_23 5801066 : 5862670 54 Bacillus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_24 6021525 : 6060402 41 Thermobifida_phage(33.33%) integrase,transposase attL 6036876:6036893|attR 6055051:6055068
DBSCAN-SWA_25 6851340 : 6903227 49 Pandoravirus(25.0%) tRNA,transposase NA
DBSCAN-SWA_26 7184899 : 7233388 39 Agrobacterium_phage(22.22%) tRNA,integrase,transposase,protease attL 7228180:7228206|attR 7231892:7231918
DBSCAN-SWA_27 7249542 : 7432283 166 Vibrio_phage(11.54%) transposase,protease NA
DBSCAN-SWA_28 7650466 : 7687799 35 Streptomyces_phage(28.57%) transposase NA
DBSCAN-SWA_29 7824098 : 7863074 34 Mycobacterium_phage(100.0%) tRNA,transposase,protease NA
DBSCAN-SWA_30 7930826 : 7992880 48 Tupanvirus(20.0%) tRNA,transposase,protease NA
DBSCAN-SWA_31 8007534 : 8087958 52 Tupanvirus(22.22%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage