CRISPRimmunity

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010946569.1\|923756_924533_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	3.3e-57	48.2
WP_010946570.1\|924525_925560_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.5e-75	47.6
WP_010946571.1\|925537_926116_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.0e-55	53.2
WP_010946572.1\|926149_926875_-	LPS export ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-17	28.3
WP_010946573.1\|926871_927381_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_010946574.1\|927361_927931_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_011213328.1\|927927_928455_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	A0A140XBD6	Dickeya_phage	1.4e-27	47.7
WP_010946576.1\|928468_929431_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.2e-38	34.1
WP_010946577.1\|929798_930596_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.3e-21	33.8

DBSCAN-SWA_2

1313229 : 1319166

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010946911.1\|1313229_1314303_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.8e-30	27.8
WP_010946912.1\|1314287_1314902_+	riboflavin synthase	A0A2I2L4R9	Orpheovirus	3.5e-22	38.4
WP_010946913.1\|1314898_1316107_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	5.4e-99	48.7
WP_010946914.1\|1316114_1316582_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	9.2e-23	49.1
WP_010946915.1\|1316707_1318345_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	3.6e-154	52.3
WP_010946916.1\|1318341_1319166_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.8e-53	43.9

DBSCAN-SWA_3

2222704 : 2232828

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010947735.1\|2222704_2224393_-	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	8.0e-16	30.4
WP_015444337.1\|2224524_2225532_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_010947737.1\|2225655_2226981_-	adenosylhomocysteinase	S4VPF6	Pandoravirus	1.4e-47	31.2
WP_010947738.1\|2226999_2228148_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.3e-126	58.5
WP_015444336.1\|2228356_2229469_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	2.9e-51	35.2
WP_010947740.1\|2229564_2230704_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.6e-23	26.9
WP_015444335.1\|2230893_2232828_-	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	1.3e-147	49.6

DBSCAN-SWA_4

2274656 : 2329681

Wolbachia_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010947782.1\|2274656_2276108_+\|transposase	IS4-like element ISLpn5 family transposase	Q9JMP3	Wolbachia_phage	6.1e-158	56.8
WP_010947783.1\|2276178_2277699_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	7.9e-124	48.2
WP_010947785.1\|2278546_2278921_+	hypothetical protein	NA	NA	NA	NA
WP_010947786.1\|2279118_2280726_-	hypothetical protein	NA	NA	NA	NA
WP_015444248.1\|2280728_2281220_-	hypothetical protein	NA	NA	NA	NA
WP_010947788.1\|2281230_2282067_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S6L1V5	Vibrio_phage	4.9e-67	48.9
WP_010947789.1\|2282659_2283751_-	DUF4917 family protein	NA	NA	NA	NA
WP_010947790.1\|2283982_2289928_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
WP_010947791.1\|2289948_2291841_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_021437030.1\|2291905_2292370_+	hypothetical protein	NA	NA	NA	NA
WP_015444244.1\|2292373_2295094_-	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA
WP_010947793.1\|2295099_2296485_-	conjugal transfer protein TraH	NA	NA	NA	NA
WP_010947794.1\|2296481_2296904_-	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA
WP_010947795.1\|2296893_2297676_-	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA
WP_010947796.1\|2297668_2299480_-	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA
WP_015444243.1\|2299479_2300148_-	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA
WP_010947798.1\|2300163_2301159_-	TraU family protein	NA	NA	NA	NA
WP_010947799.1\|2301155_2301764_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA
WP_015444242.1\|2301760_2302096_-	TrbI F-type domain-containing protein	NA	NA	NA	NA
WP_015444241.1\|2302088_2304641_-	type IV secretion system protein TraC	NA	NA	NA	NA
WP_010947801.1\|2304652_2305003_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA
WP_015444240.1\|2305016_2306303_-	TraB/VirB10 family protein	NA	NA	NA	NA
WP_010947803.1\|2306304_2307018_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA
WP_010947804.1\|2307020_2307584_-	type IV conjugative transfer system protein TraE	NA	NA	NA	NA
WP_010947805.1\|2307587_2307881_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
WP_010947806.1\|2307882_2308185_-	fimbrial protein	NA	NA	NA	NA
WP_010947807.1\|2308199_2308436_-	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	2.5e-08	52.9
WP_025520140.1\|2308449_2308827_-	hypothetical protein	NA	NA	NA	NA
WP_010947808.1\|2308774_2309659_-	hypothetical protein	NA	NA	NA	NA
WP_015444237.1\|2309831_2310512_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	1.6e-07	28.1
WP_016356978.1\|2310660_2311335_+\|transposase	transposase	NA	NA	NA	NA
WP_010947811.1\|2311783_2312356_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_015444236.1\|2312339_2312837_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_010947813.1\|2312829_2313417_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_010947814.1\|2313421_2315557_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_010947815.1\|2315575_2316457_-	sterol desaturase family protein	NA	NA	NA	NA
WP_010947816.1\|2316563_2316710_-	hypothetical protein	NA	NA	NA	NA
WP_010947817.1\|2316901_2317078_+	MAPEG family protein	NA	NA	NA	NA
WP_010947818.1\|2317247_2317745_-	DoxX family protein	NA	NA	NA	NA
WP_010947819.1\|2317734_2318514_-	DUF2063 domain-containing protein	NA	NA	NA	NA
WP_010947820.1\|2318506_2319361_-	DUF692 domain-containing protein	NA	NA	NA	NA
WP_010947821.1\|2319375_2319669_-	DUF2282 domain-containing protein	NA	NA	NA	NA
WP_010947822.1\|2319858_2320380_-	hypothetical protein	NA	NA	NA	NA
WP_015444234.1\|2320684_2321143_-	hypothetical protein	NA	NA	NA	NA
WP_015444232.1\|2321716_2321944_-	hypothetical protein	NA	NA	NA	NA
WP_010947824.1\|2322101_2322623_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_010947825.1\|2322794_2323349_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_010947826.1\|2323782_2323983_+	ATP-dependent DNA helicase	NA	NA	NA	NA
WP_010947827.1\|2324076_2324460_+\|transposase	transposase	NA	NA	NA	NA
WP_010947828.1\|2324513_2325467_-	Abi family protein	A3QSC6	Clostridium_virus	4.8e-34	31.8
WP_015444229.1\|2325976_2327395_+\|transposase	IS4-like element ISLpn3 family transposase	Q9JMP3	Wolbachia_phage	2.3e-56	32.9
WP_010947829.1\|2327427_2328603_-\|transposase	ISL3 family transposase	A4PE56	Ralstonia_virus	5.2e-14	21.2
WP_010947830.1\|2328655_2329681_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2626829 : 2690098

Erysipelothrix_phage(18.75%)

protease,integrase,tRNA,transposase

attL 2632737:2632783|attR 2688769:2688815

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010948063.1\|2626829_2627831_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.8e-91	50.7
WP_010948064.1\|2628035_2628275_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_010948065.1\|2628477_2628921_+	lpg2359 family Dot/Icm T4SS effector	A0A292GL36	Xanthomonas_phage	6.3e-21	43.8
WP_014842314.1\|2628929_2630663_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	4.6e-59	35.5
WP_011216252.1\|2630749_2632615_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.3e-35	32.8
2632737:2632783	attL	NA	NA	NA	NA
WP_187297743.1\|2632873_2634001_-\|integrase	site-specific integrase	A0A059VF45	Pseudomonas_phage	2.2e-86	47.3
WP_061466610.1\|2634381_2634567_+	hypothetical protein	NA	NA	NA	NA
WP_061466612.1\|2634559_2635336_+	methylase	NA	NA	NA	NA
WP_061634671.1\|2635469_2636285_+	hypothetical protein	NA	NA	NA	NA
WP_061466974.1\|2636326_2637637_-	hypothetical protein	NA	NA	NA	NA
WP_061466975.1\|2637766_2639248_+	MFS transporter	A0A0P0IY73	Acinetobacter_phage	9.4e-29	24.8
WP_061466976.1\|2639401_2639644_+	hypothetical protein	NA	NA	NA	NA
WP_061466977.1\|2639878_2640073_+	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	4.8e-18	60.3
WP_061634672.1\|2640100_2643376_+	DEAD/DEAH box helicase family protein	A0A2K5B2B9	Erysipelothrix_phage	4.8e-235	42.8
WP_061466985.1\|2643368_2644031_+	DUF4391 domain-containing protein	NA	NA	NA	NA
WP_061634673.1\|2644050_2646006_+	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	2.0e-103	36.1
WP_061466981.1\|2646023_2649056_+	DEAD/DEAH box helicase family protein	A0A2K5B2C2	Erysipelothrix_phage	1.7e-130	33.4
WP_061634674.1\|2649131_2650931_+	DUF4209 domain-containing protein	NA	NA	NA	NA
WP_061466952.1\|2650927_2651611_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	6.5e-17	33.3
WP_061466938.1\|2651812_2652697_+	hypothetical protein	NA	NA	NA	NA
WP_042234550.1\|2652716_2653028_+	Vir protein	NA	NA	NA	NA
WP_042234461.1\|2653044_2653317_+	carbon storage regulator	A0A0U1UNS3	Pseudomonas_phage	5.0e-05	41.8
WP_042234463.1\|2653344_2654310_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
WP_042234466.1\|2654321_2654699_+	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_061466939.1\|2654695_2654995_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_061466940.1\|2654991_2657526_+	conjugal transfer protein TrbE	NA	NA	NA	NA
WP_061466941.1\|2657522_2658221_+	conjugal transfer protein TrbF	NA	NA	NA	NA
WP_061466942.1\|2658217_2659093_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_061466943.1\|2659095_2659503_+	conjugal transfer protein TrbH	NA	NA	NA	NA
WP_061466944.1\|2659508_2660756_+	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_061466945.1\|2660767_2661508_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
WP_061466946.1\|2661530_2661743_+	hypothetical protein	NA	NA	NA	NA
WP_061466947.1\|2661747_2663130_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
WP_061466948.1\|2663126_2665016_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_061466949.1\|2665012_2665558_+	conjugative transfer signal peptidase TraF	NA	NA	NA	NA
WP_187297749.1\|2665554_2665719_+	hypothetical protein	NA	NA	NA	NA
WP_061466950.1\|2665711_2667898_+	DUF1738 domain-containing protein	A0A1B1IRD0	uncultured_Mediterranean_phage	1.1e-36	33.9
WP_061634675.1\|2668027_2669623_-	hypothetical protein	NA	NA	NA	NA
WP_061466916.1\|2669932_2671795_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_058450394.1\|2671791_2672145_-	conjugal transfer transcriptional regulator TraJ	NA	NA	NA	NA
WP_058450393.1\|2672538_2672883_+	TraK family protein	NA	NA	NA	NA
WP_058450392.1\|2672882_2673608_+	conjugal transfer protein TraL	NA	NA	NA	NA
WP_061466918.1\|2673607_2674045_+	conjugal transfer protein TraM	NA	NA	NA	NA
WP_061466920.1\|2674292_2675354_-	DUF4116 domain-containing protein	NA	NA	NA	NA
WP_080444600.1\|2675776_2677411_+\|transposase	transposase	NA	NA	NA	NA
WP_040146985.1\|2677365_2677758_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_058450390.1\|2678239_2678482_-	hypothetical protein	NA	NA	NA	NA
WP_061466923.1\|2678724_2680665_+	DUF2779 domain-containing protein	NA	NA	NA	NA
WP_044496813.1\|2680744_2681596_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_044496821.1\|2681592_2682201_-	AbiEi antitoxin N-terminal domain-containing protein	NA	NA	NA	NA
WP_058450388.1\|2683008_2683413_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.1e-08	33.1
WP_080444601.1\|2683370_2683496_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_044496812.1\|2683620_2684673_+	LD-carboxypeptidase	NA	NA	NA	NA
WP_061466925.1\|2684679_2685897_-	MFS transporter	NA	NA	NA	NA
WP_052585449.1\|2685926_2686973_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	1.5e-25	32.4
WP_061466927.1\|2686974_2688039_-	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_015444121.1\|2688922_2690098_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	3.8e-17	23.2
2688769:2688815	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015950

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection