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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017314 Bacillus subtilis strain BS38, complete genome 2 crisprs csa3,RT,cas3,DEDDh,WYL,DinG 0 1 13 0

Results visualization

1. NZ_CP017314
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017314_1 936864-936969 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017314_2 2902943-2903050 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017314_2 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder 2902967-2903026 60 NZ_CP024037 Bacillus aryabhattai strain K13 plasmid unnamed2 10417-10476 7 0.883
NZ_CP017314_2 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder 2902967-2903026 60 NZ_CP026740 Bacillus megaterium strain YC4-R4 plasmid unnamed4 70764-70823 7 0.883
NZ_CP017314_2 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder 2902967-2903026 60 NC_017139 Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence 1318-1377 7 0.883
NZ_CP017314_2 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder 2902967-2903026 60 NZ_CP010587 Bacillus megaterium Q3 plasmid p1, complete sequence 838-897 7 0.883
NZ_CP017314_2 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder 2902967-2903026 60 NZ_CP023319 Bacillus megaterium strain A plasmid p2, complete sequence 75825-75884 7 0.883
NZ_CP017314_2 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder 2902967-2903026 60 NC_020451 Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence 1960-2019 9 0.85
NZ_CP017314_2 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder 2902967-2903026 60 NZ_CP015440 Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence 64773-64832 12 0.8
NZ_CP017314_2 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder 2902967-2903026 60 NZ_CP033045 Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence 483791-483850 13 0.783
NZ_CP017314_2 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder 2902967-2903026 60 NZ_LR134399 Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence 57361-57420 14 0.767

1. spacer 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

2. spacer 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

3. spacer 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

4. spacer 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

5. spacer 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

6. spacer 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder matches to NC_020451 (Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence) position: , mismatch: 9, identity: 0.85

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcattttagttatggcccggg	Protospacer
****************************************** ***   * ***  **. 

7. spacer 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder matches to NZ_CP015440 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence) position: , mismatch: 12, identity: 0.8

cagcttggaaggctgaggttttaccactaaactacacccgca-------atttttatttg	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcataataatatataccattg	Protospacer
******************************************       ** * .  ***

8. spacer 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 13, identity: 0.783

cagcttggaaggctgaggttttaccactaaactacacccgc--------aatttttattt	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatggttaaaagttttgcca	Protospacer
*****************************************        ** ****... 

9. spacer 2.1|2902967|60|NZ_CP017314|CRISPRCasFinder matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 14, identity: 0.767

cagcttggaaggctgaggttttaccactaaactacacccgc---------aatttttatt	CRISPR spacer
cagcttggaaggctgtagttttaccactaaactacacccgcatagtaagtagttcttagt	Protospacer
*************** .************************         *.**.*** *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 700433 : 708799 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_2 725145 : 789376 55 Bacillus_phage(22.22%) tRNA,transposase,coat NA
DBSCAN-SWA_3 1223378 : 1271346 55 Planktothrix_phage(22.22%) coat,transposase,tRNA NA
DBSCAN-SWA_4 1340877 : 1375610 45 uncultured_Caudovirales_phage(32.35%) portal,terminase,holin,plate NA
DBSCAN-SWA_5 1770726 : 1830320 53 Bacillus_phage(20.0%) coat,tRNA,transposase,terminase NA
DBSCAN-SWA_6 1840495 : 1847067 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_7 1985629 : 1996319 10 Bacillus_phage(75.0%) transposase,holin NA
DBSCAN-SWA_8 2208733 : 2214828 8 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_9 2573001 : 2626475 56 uncultured_Mediterranean_phage(12.5%) coat,tRNA,protease NA
DBSCAN-SWA_10 2866352 : 2920032 46 Staphylococcus_phage(20.0%) coat,transposase,holin NA
DBSCAN-SWA_11 3198121 : 3253942 67 Bacillus_phage(69.05%) protease,capsid,tail,head,portal,terminase,holin NA
DBSCAN-SWA_12 3594538 : 3628104 29 Shigella_phage(20.0%) tRNA,transposase,bacteriocin NA
DBSCAN-SWA_13 3637813 : 3679094 38 Enterobacteria_phage(22.22%) coat,tRNA,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage