CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP013364	Burkholderia diffusa strain RF2-non-BP9 chromosome 3, complete sequence	0 crisprs	WYL,csa3,PD-DExK	0
NZ_CP013362	Burkholderia diffusa strain RF2-non-BP9 chromosome 1, complete sequence	1 crisprs	cas3,DEDDh,csa3,DinG	3
NZ_CP013363	Burkholderia diffusa strain RF2-non-BP9 chromosome 2, complete sequence	1 crisprs	cas3,csa3,DinG,DEDDh	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013362_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013362_1

554879-554973

Orphan

Consensus_repeat	Method
CGCGTTGCCCGCGACCGCGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013362_1

>merge|NZ_CP013362|1|554879-554973|CRISPRCasFinder
CGCGTTGCCCGCGACCGCGCCGACGAGACCGCCCGCGATGGCCGTCAGGATCGATCCCTTGCCGCCGCCGATCGCGCTGCCCGCGACCGCGCCGA

>NZ_CP013362|1|1|554879-554973|CRISPRCasFinder
CGCGTTGCCCGCGACCGCGCCGA	CGAGACCGCCCGCGATGGCCGTCAGGATCGATCCCTTGCCGCCGCCGAT
CGCGCTGCCCGCGACCGCGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013362.1\|WP_059465340.1\|555209_556148_-\|carbohydrate-kinase-family-protein	unknown	unknown	gnl\|CDD\|238917
NZ_CP013362.1\|WP_069226335.1\|562301_562946_-\|UDP-N-acetylmuramate--alanine-ligase	unknown	unknown	unknown
NZ_CP013362.1\|WP_059465334.1\|546547_547441_+\|cytochrome-c-biogenesis-protein-CcsA	unknown	unknown	gnl\|CDD\|226621
NZ_CP013362.1\|WP_040143361.1\|561083_561536_-\|type-II-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|235443
NZ_CP013362.1\|WP_059465338.1\|552168_553380_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|235968
NZ_CP013362.1\|WP_059451920.1\|553817_554501_+\|histone-H1-like-DNA-binding-protein	unknown	unknown	gnl\|CDD\|237855
NZ_CP013362.1\|WP_069225109.1\|547768_548359_+\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP013362.1\|WP_069225107.1\|545090_546458_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP013362.1\|WP_081334211.1\|553462_553789_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013362.1\|WP_069225110.1\|556816_558139_-\|DUF3426-domain-containing-protein	unknown	unknown	gnl\|CDD\|378759
NZ_CP013362.1\|WP_059538682.1\|548811_551805_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|235966
NZ_CP013362.1\|WP_059538670.1\|563179_564565_+\|UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl--meso-diaminopimelate-ligase	unknown	unknown	gnl\|CDD\|130153
NZ_CP013362.1\|WP_069225108.1\|547454_547772_+\|deaminase	unknown	unknown	unknown
NZ_CP013362.1\|WP_059465345.1\|560542_561019_-\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	unknown	unknown	gnl\|CDD\|235777
NZ_CP013362.1\|WP_059538680.1\|551922_552105_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013362.1\|WP_059465341.1\|556242_556746_-\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_CP013362.1\|WP_059510979.1\|558184_559087_-\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|234786
NZ_CP013362.1\|WP_059465344.1\|559089_560457_-\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|236307
NZ_CP013362.1\|WP_059465332.1\|544444_544996_-\|hypoxanthine-guanine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|181675
NZ_CP013362.1\|WP_069225111.1\|561730_562294_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264

Protein	Function_ID	Function_description	E-value
NZ_CP013362.1\|WP_059465340.1\|555209_556148_-\|carbohydrate-kinase-family-protein	gnl\|CDD\|238917	cd01942, ribokinase_group_A, Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	1.81069e-101
NZ_CP013362.1\|WP_059465334.1\|546547_547441_+\|cytochrome-c-biogenesis-protein-CcsA	gnl\|CDD\|226621	COG4137, COG4137, ABC-type uncharacterized transport system, permease component [General function prediction only].	4.18554e-60
NZ_CP013362.1\|WP_059538670.1\|563179_564565_+\|UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl--meso-diaminopimelate-ligase	gnl\|CDD\|130153	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase. Alternate name: murein tripeptide ligase [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP013362.1\|WP_059465338.1\|552168_553380_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|235968	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated.	0
NZ_CP013362.1\|WP_059451920.1\|553817_554501_+\|histone-H1-like-DNA-binding-protein	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	2.03516e-12
NZ_CP013362.1\|WP_069225109.1\|547768_548359_+\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	3.24381e-122
NZ_CP013362.1\|WP_069225107.1\|545090_546458_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP013362.1\|WP_059465332.1\|544444_544996_-\|hypoxanthine-guanine-phosphoribosyltransferase	gnl\|CDD\|181675	PRK09162, PRK09162, hypoxanthine-guanine phosphoribosyltransferase; Provisional.	1.76267e-113
NZ_CP013362.1\|WP_069225110.1\|556816_558139_-\|DUF3426-domain-containing-protein	gnl\|CDD\|378759	pfam11906, DUF3426, Protein of unknown function (DUF3426). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.	6.53401e-41
NZ_CP013362.1\|WP_059538682.1\|548811_551805_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|235966	PRK07207, PRK07207, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP013362.1\|WP_059465345.1\|560542_561019_-\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	gnl\|CDD\|235777	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein.	1.0952e-83
NZ_CP013362.1\|WP_040143361.1\|561083_561536_-\|type-II-3-dehydroquinate-dehydratase	gnl\|CDD\|235443	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase.	9.12418e-97
NZ_CP013362.1\|WP_059465341.1\|556242_556746_-\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	1.80598e-96
NZ_CP013362.1\|WP_059510979.1\|558184_559087_-\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|234786	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase.	5.11741e-121
NZ_CP013362.1\|WP_059465344.1\|559089_560457_-\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_CP013362.1\|WP_069225111.1\|561730_562294_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	8.17905e-40

>NZ_CP013362.1|WP_059451920.1|553817_554501_+|histone-H1-like-DNA-binding-protein
MATAKKKPAAKKVAAKKTVAKKAAAPAKKAAAVKKVAAKKVAVKKVAAKKAAPAKKAAAKKVAAKKVATKKVAAKKVAAKKVAVKKVAAKKAAPAKKAAAKKVAAKKVAVKKVAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAPAKKAAAAPKAAAPKAAAPAKKAAAPKKAVVKKAAPATTASTASVAPASGVKTALNPAAAWPFPTGSRP
>NZ_CP013362.1|WP_081334211.1|553462_553789_+|hypothetical-protein
MQSMPGALTAQRHDRHFANPSVGWANFPPEKAGSRVAVRLIKRLGVAARGAPATDLIWRARPWGHARHTVFISVSAWYPRTPMNSPLRSARPEQRPREAGFDEGCSLN
>NZ_CP013362.1|WP_059465338.1|552168_553380_+|ribonucleotide-diphosphate-reductase-subunit-beta
MLNWDDEKTAVTPASGAQQNTMRTSAGMAVGLQAATPAAHQVRDIFEGDLAVPPQASAVPAGASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE
>NZ_CP013362.1|WP_059538680.1|551922_552105_+|hypothetical-protein
MQAVTSDRNIPDDVAFRSAFDASSAPRDTCVTRVALCMNDDALLKVLYRGRNANRKKDFS
>NZ_CP013362.1|WP_059538682.1|548811_551805_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MQTTDNATSQYESASSRPLGGTEQGAQALAPQATFADYKVIRRNGSVVSFEPSKIAIAVTKAFLAVNGGQGAASARVRELVEQLTHNVVRALVRSRPNGGTFHIEDIQDQVELALMRGGEHNVARAYVLYREKRHLERQHAGEEAAAAGGESSTGINVVDNGVTRPLDLNALRALIVSACDGLGTAVNPDPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILGEEVVQAEMSARYAEYFPQFLKRGVDAGLLDDKLLQFDLKRLGEALDANRDLQFGYLGLQTLYDRYFLHVDGSRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEKAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLVKQADGSYALDHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKTTYYLRTMAATHVEKSTVAHGALNAVPTGGSSSGGAQGAAGGFGAAGGAASSSGALDAAPALAPVEADGPVCTMRPGDPGFDECEACQ
>NZ_CP013362.1|WP_069225109.1|547768_548359_+|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MSDAALLSVDARGWVREARHAPSPNFEARPAGAVPTLVVVHNISLPPGEFGGDAIEALFLNRLDCDAHPYYRSHLRGVRVSAHFLIRRDGELVQFVSCDERAWHAGASEFFGRPRCNDFSIGIELEGADDVPFDAAQYATLGVLARTLAARYPIDAVAGHSDVAPGRKTDPGPHFDWQRFARDAGFSAEYFPFRQH
>NZ_CP013362.1|WP_069225108.1|547454_547772_+|deaminase
MRQILLLILLFFAGSWLTRKLRQAQEHAQARTGRGGGFDGAPGSGSAGTARPNGDARSLPEPMVRCAECGVHAPKGDAVVAGGEYFCSIEHAQRHGAHASGYDAR
>NZ_CP013362.1|WP_059465334.1|546547_547441_+|cytochrome-c-biogenesis-protein-CcsA
MDIVLYALTAFLYGGLAVAGWRTHRQGATSLVASVPAVPVPASAASGMSGAGRALLFAALVAHGVLLHMTIFPHDAMIFGFAFALSAMFWLGAGIYWIESFFFPLDSLRLLVLPLACGASLLPLVFGGVRVLPYAAAPLFKMHFLIANIAYGLFAIAALHAVLMLMVERRLQSLRSGGRDGSTGWIASWLETLPPLLTLEKLLFRLIGAGFVLLTLTLASGILFSEQVDARALRLDHKTVFAVLSWLMFGGLLVARKTSGWRGRGAARWVLVSFAALLLAYVGSRFVFEVLLHRSVV
>NZ_CP013362.1|WP_069225107.1|545090_546458_-|signal-recognition-particle-protein
MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVREFIAKVKEKALGEEVISSLSPGQALVGVVQKELTAVIGGNYEGKAAELNLAVTPPAVILMAGLQGAGKTTTAGKLAKLLREKYKKKVLTVSCDVYRPAAIMQLKTVSEQVGADFFPSTPDQKPVDIALAAVDWAKRHYHDVLIVDTAGRLGIDEAMMQEIAALHGTLKPAETLFVVDAMLGQDAVNTAKAFNDTLPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFVGVAEKLDGLEVFHPDRMANRILGMGDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFRAQISQMKNMGGLSSLMDKLPAQFQQAAAGADMGQAEKQIRRMEGIISSMTPAERAKPEIIKATRKRRIAAGAGVPVQEVNRMLNQYDQMRTMMKKLKGGNMQKMMRGLKGMMPGMR
>NZ_CP013362.1|WP_059465332.1|544444_544996_-|hypoxanthine-guanine-phosphoribosyltransferase
MNREEALHIFDHSEEIVSADAVNASIARMADAIRADIGDAFPLVLSVMGGAAVFTGMLLPHLDFPLEFDYIHLTRYRNTTQGSPEMHWRVAPRESVKDRIVLVLDDILDEGETMAAIRDRILDMGAKRFMSAVLCEKTLAKAKPLHPDFCGFSVPDRYVFGCGMDAKGYWRNLPTIRALTANV
>NZ_CP013362.1|WP_059465340.1|555209_556148_-|carbohydrate-kinase-family-protein
MTTLICGSLAYDNIMTFEGRFREHILPDQVHLLNVSFLVPTMRREFGGCAGNIAYALHMLGGDARIMATVGANDADRYLERLDSLGLSRASVRVVPETHTAQAMITTDLENNQITAFHPGAMMQSHLNRADEVSGVKLGIVAPDGFDGMVQHAEQFAKAGIPFIFDPGQGLPLFDGATLRRIIELATFVAVNDYEGKLVSDRTGWSEQEIASRVQALIITRGEHGATILHKNGEEQIPAVQAERVVDPTGCGDAFRGGLLYGIENGLDWATTGRLASLMGSIKIAHQGPQTYALTRAEIDARFEAAFGYSLK
>NZ_CP013362.1|WP_059465341.1|556242_556746_-|thiol-peroxidase
MSKVTLGGNPIDLAGTFPAVGSQAPDFKLVGKDLADLSLASFAGKRKVLNIVPSLDTPTCATSTRKFNEAASSLDNTVVIVVSGDLPFAATRFCTTEGLANVVTASTFRGARAFANAYGVDVTSGPLNGLTARAVVVLDAQDKVIHAELVSEIKDEPNYDAALAALK
>NZ_CP013362.1|WP_069225110.1|556816_558139_-|DUF3426-domain-containing-protein
MLLATRCPHCETVFRLQQEQLSLHDGLVRCGHCQQVFNASQSLVPEPALTEAAPAGPAATEPQHEAAPARLFATDAPVEPASRSDYQPEGWDMWAPWLDAGVDPSLQHTVQTVRTEPLVPVALPAIDAGVVHLSGTPAPIASAPAELHTVASAEPDLGRHETDSSGTSRATPPAEPDLREPRFVAHTPSAADANEPVGNAHFSVPDDERAPREPRFAFTPAQVVPEHDCNADEGAPAPAAAVSEAADQPAVQPAVPFPAALADDDRPHFAVTRETRAPQRRGLLGGFFGGLVAAVLAVLLVAQLAWWQRETAMIYWPVTQGWFRQACAPLGCTVAPPRAIDGLRLDAADLRQLDGPRVLELKVPLTNRYRVALAYPSLELTLLDDTNHVTVRRVLAPRDYVRPGTPIDAGLPPGTTRTMVVRLDTNGAPASNFRVQIFYP
>NZ_CP013362.1|WP_059510979.1|558184_559087_-|50S-ribosomal-protein-L11-methyltransferase
MSYRELVVELAREHAEALSDALLDLGALSVSVEDADADTPDEQPLFGEPGLVPERTAWQHSRVIALLSPDHEPAVLLAAAANEIGVAETPKFDVREVEEQDWVRLTQSQFEPIPIGERIWVVPSWHDAPDPDALILELDPGLAFGTGSHPTTRLCMEWLEQSVKPGQSVLDYGCGSGILAILAKKCGANPVVGIDIDPQAVESARQNSERNHAEVTYGLPDACPPGEFDIVVANILSNPLKLMASMLASKVKPGGHIALSGVLARQADEVAAVYARYVDISVWREHEGWVCLAGTRRESH
>NZ_CP013362.1|WP_059465344.1|559089_560457_-|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MFEKILIANRGEIALRIQRACRELGVKTVVVYSEADKEAKYVRLADEAVCIGPAPSNLSYLNMPALISAAEVTDAEAIHPGYGFLSENADFAERVEQSGFTFIGPRPETIRLMGDKVTAKQTMIKTGVPCVPGSEGALPDDPKEIVKIARAIGYPVIIKAAGGGGGRGMRVVHTEAALVNAVNMTREEAGRAFGNPQVYMEKFLENPRHIEIQVLSDAHKNAIWLGERDCSMQRRHQKVIEEAPAPGIPRRLIERIGDRCADACKKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVSEMITGVDIVQEQIRIAAGEKLALRQRDIQFRGHAIECRINAEDPFKFTPSPGRITSWHTPGGPGVRVDSHAYNGYFVPPNYDSMIGKLITYGATRDQAIRRMRIALSEMVVEGIQTNIPLHRELMIDSKFVEGGTSIHYLEHRLAQKQQVAPEEA
>NZ_CP013362.1|WP_059465345.1|560542_561019_-|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein
MDLRKLKTLIDLVSESGISELEVTEGEGKVRIVKNAPPVYVQPTGGFAPQVSAPAPAVALPTEGAAAAPAAGAAAAPAAPQGHVVTSPMVGTFYRAPSPGADPFTQVGDTVKEGQTICIIEAMKLLNEIESDKAGVIKEILVENGQAVEYGQPLFVIG
>NZ_CP013362.1|WP_040143361.1|561083_561536_-|type-II-3-dehydroquinate-dehydratase
MTRLLVLHGPNLNLLGTREPEVYGRVTLAQIDQALAARAQEAGAELSSFQSNHEGALVDRIQAAREEQTDFILINPAAYTHTSVAIRDAIAGVGIPFVEVHLSNVHRREAFRHHSYFSDQAEGVICGLGWKGYLYALEYALDKLQGASRG
>NZ_CP013362.1|WP_069225111.1|561730_562294_-|TlpA-family-protein-disulfide-reductase
MMMKRMLALAVVAAAAVAGGLAAGHWFRGGSADDGVAVAAPAASTAKGSPVDQLWAASLTGVDGKPASLVSFKGQKVVVNFWASWCGPCVEEMPELVALSHQYKQKGIRFIGIGVDSDQNVKNFLQKVKVDYPVFVSGYAGADLARNFGNAAGALPFTVVIDETGKIRETKLGQIQPAELKKTLDAL
>NZ_CP013362.1|WP_069226335.1|562301_562946_-|UDP-N-acetylmuramate--alanine-ligase
MSRKPLVDPRRAREEIAQSAARLIAEDGLDYAGAKRKAARQLFGDTRVAGEWLPDNDLIEEELREYLALFQSDTQPDELRRLREVALDWMRRLAEFNPYVTGAVLNGTANVHSDIHFQIFTDNPKDVAIYLLNQNVQYDVSETRHFAGRADVETLSFLWRPRRDVDAIGIHVALYASDDLRGAVKADARGRVARADAAALRTLLEAGNAPSEPE
>NZ_CP013362.1|WP_059538670.1|563179_564565_+|UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl--meso-diaminopimelate-ligase
MHIHILGICGTFMGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGITLIEGYGAEQIDLKPDLFVIGNVVTRGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWLLEDAGLNPGFLIGGVPLNFGVSARLTDSSFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRIVTNGRSDALERVLARGCWSEVERFGVDGGWQALPAEDGVPVDERFAVYSQAERVGEVAWQVQGDHNRMNALAAIAAARHVGVPPAQAAASLASFRNVKRRMEVRGSVDGVTVYDDFAHHPTAIETTIAGLRARIGRQNSRILAVLEPRSNTMKLGVMKAQLPASLADADLVFGYGAPTGRDALGWNLGDALAPLGDKARAFDDLHLLVKSVVEAARPGDHVLVMSNGGFGGVHQKLLDALGSRA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

392424 : 418271

uncultured_Caudovirales_phage(50.0%)

protease,transposase,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_059593715.1\|392424_392946_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	4.8e-20	46.7
WP_155768725.1\|393222_393924_-	hypothetical protein	NA	NA	NA	NA
WP_059449797.1\|394351_394555_+	hypothetical protein	NA	NA	NA	NA
WP_059468318.1\|394636_395437_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_069225057.1\|395797_398977_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.2e-58	28.7
WP_069225058.1\|399028_403669_+	sugar-binding protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.8e-49	47.0
WP_069225059.1\|403665_404034_+	hypothetical protein	NA	NA	NA	NA
WP_155768726.1\|404589_404757_+	hypothetical protein	NA	NA	NA	NA
WP_069225060.1\|405287_405713_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_155768721.1\|405900_407027_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.6e-59	44.6
WP_167359227.1\|407147_407402_+	TNT domain-containing protein	NA	NA	NA	NA
WP_059914980.1\|407834_408152_+	hypothetical protein	NA	NA	NA	NA
WP_069225061.1\|408244_409027_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_059465239.1\|409023_410370_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_059539163.1\|410472_411072_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_059465241.1\|411464_412106_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_059465242.1\|412150_412666_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_006757139.1\|412681_414172_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_006477093.1\|414242_414746_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_059465243.1\|414808_415294_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_059465244.1\|415371_417207_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_059465245.1\|417170_418271_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_2

714667 : 723719

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_059465455.1\|714667_716617_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	1.5e-146	50.3
WP_059465456.1\|716870_718007_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	8.5e-22	26.5
WP_069225163.1\|718011_719931_+	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	4.0e-56	35.9
WP_069225164.1\|720063_720879_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	1.1e-36	33.3
WP_059465459.1\|720922_721609_-	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	1.2e-05	24.4
WP_059465460.1\|721605_722148_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_059538295.1\|722183_723719_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	3.0e-22	30.3

DBSCAN-SWA_3

1571800 : 1606296

Burkholderia_phage(64.86%)

capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069225576.1\|1571800_1572424_-	1-pyrroline-5-carboxylate dehydrogenase	A9YX18	Burkholderia_phage	1.8e-18	92.5
WP_069225577.1\|1572420_1574187_-	AAA family ATPase	J7HXJ7	Pseudomonas_phage	1.8e-71	34.7
WP_069225578.1\|1574199_1575375_-	hypothetical protein	J7HXB6	Pseudomonas_phage	1.3e-62	52.2
WP_069225579.1\|1575389_1576199_-	hypothetical protein	J7HXJ4	Pseudomonas_phage	3.8e-93	61.7
WP_167359236.1\|1576195_1576339_-	hypothetical protein	A9YWW4	Burkholderia_phage	4.6e-10	73.9
WP_167359237.1\|1576335_1576503_-	hypothetical protein	NA	NA	NA	NA
WP_167359238.1\|1576499_1576676_-	hypothetical protein	A9YWW6	Burkholderia_phage	3.8e-14	67.2
WP_069225580.1\|1576675_1577002_-	hypothetical protein	NA	NA	NA	NA
WP_069225581.1\|1576998_1577229_-	hypothetical protein	Q3HQW9	Burkholderia_phage	1.1e-16	57.1
WP_081334236.1\|1577276_1577579_-	hypothetical protein	A0A2K8HLR2	Pseudomonas_phage	5.0e-14	44.7
WP_069225582.1\|1577606_1578023_-	hypothetical protein	NA	NA	NA	NA
WP_060127776.1\|1578866_1579211_-	helix-turn-helix domain-containing protein	A9YWX7	Burkholderia_phage	2.6e-46	83.5
WP_060127774.1\|1579295_1579550_+	transcriptional regulator	A9YWX8	Burkholderia_phage	1.4e-36	92.1
WP_059594800.1\|1579592_1579817_+	hypothetical protein	NA	NA	NA	NA
WP_069225584.1\|1579813_1580041_+	hypothetical protein	NA	NA	NA	NA
WP_069225585.1\|1580073_1580874_-	hypothetical protein	NA	NA	NA	NA
WP_069226368.1\|1581596_1582031_+	hypothetical protein	NA	NA	NA	NA
WP_069225586.1\|1582027_1582501_+	RusA family crossover junction endodeoxyribonuclease	A9YWY9	Burkholderia_phage	1.2e-59	76.6
WP_081334278.1\|1582547_1582841_+	hypothetical protein	A9YWZ0	Burkholderia_phage	2.7e-20	58.2
WP_069225588.1\|1582837_1583269_+	hypothetical protein	NA	NA	NA	NA
WP_155768743.1\|1583378_1584140_-	hypothetical protein	NA	NA	NA	NA
WP_069225589.1\|1584250_1584916_+	hypothetical protein	A9YWZ4	Burkholderia_phage	6.6e-107	81.4
WP_060294337.1\|1584933_1585413_+	DUF2280 domain-containing protein	A9YWZ5	Burkholderia_phage	6.2e-75	92.5
WP_069225590.1\|1585414_1587010_+	TerL protein	A9YWZ6	Burkholderia_phage	9.4e-293	90.2
WP_081334237.1\|1587006_1588590_+	DUF1073 domain-containing protein	A0A0P0I486	Acinetobacter_phage	5.0e-153	61.7
WP_081334238.1\|1588519_1589173_+\|capsid	minor capsid protein	A9YWZ8	Burkholderia_phage	1.7e-75	70.1
WP_069225592.1\|1589174_1590476_+	DUF2213 domain-containing protein	A0A0P0IRE1	Acinetobacter_phage	5.6e-70	45.5
WP_069225593.1\|1590488_1590977_+	hypothetical protein	A0A0P0I8F3	Acinetobacter_phage	2.1e-38	56.2
WP_069225594.1\|1590987_1592025_+	DUF2184 domain-containing protein	A0A0N7IRF2	Acinetobacter_phage	8.3e-125	66.9
WP_069225595.1\|1592026_1592299_+	hypothetical protein	A9YX24	Burkholderia_phage	5.4e-15	74.0
WP_069225596.1\|1592307_1592691_+	DUF4054 domain-containing protein	A9YX25	Burkholderia_phage	1.0e-59	89.0
WP_069225597.1\|1592719_1593202_+	hypothetical protein	A9YX26	Burkholderia_phage	2.3e-69	86.2
WP_069225598.1\|1593237_1593459_+	hypothetical protein	NA	NA	NA	NA
WP_069225599.1\|1593520_1593898_+	hypothetical protein	A9YX28	Burkholderia_phage	3.0e-56	86.4
WP_069225600.1\|1593902_1594493_+	hypothetical protein	A9YX29	Burkholderia_phage	2.4e-100	92.3
WP_069225601.1\|1594502_1595978_+	DUF3383 domain-containing protein	A0A0P0I492	Acinetobacter_phage	9.8e-111	46.8
WP_069225602.1\|1595993_1596434_+	DUF3277 family protein	A0A0P0IKY2	Acinetobacter_phage	2.9e-42	60.3
WP_069225603.1\|1596436_1596988_+	hypothetical protein	A0A0N7IRF3	Acinetobacter_phage	3.1e-17	33.0
WP_069225604.1\|1597171_1599172_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	A0A0M4REK7	Salmonella_phage	5.5e-40	35.8
WP_081334239.1\|1599168_1599744_+	hypothetical protein	A0A0M3ULD5	Salmonella_phage	7.6e-19	36.3
WP_069225605.1\|1599743_1600061_+	hypothetical protein	NA	NA	NA	NA
WP_069225606.1\|1600057_1601026_+	hypothetical protein	A9YX04	Burkholderia_phage	4.0e-161	97.2
WP_069225607.1\|1601022_1601400_-	hypothetical protein	A9YX05	Burkholderia_phage	5.6e-55	84.0
WP_069225608.1\|1601403_1602156_+	hypothetical protein	A9YX06	Burkholderia_phage	4.1e-121	90.4
WP_069225609.1\|1602164_1602518_+	hypothetical protein	A9YX11	Burkholderia_phage	7.3e-57	94.9
WP_069225610.1\|1602514_1603696_+	hypothetical protein	A9YX12	Burkholderia_phage	2.9e-198	93.6
WP_069225611.1\|1603695_1605216_+	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	7.0e-72	36.8
WP_069225612.1\|1605279_1606296_+	hypothetical protein	A9YX14	Burkholderia_phage	6.2e-64	40.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP013363

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013363_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013363_1

2597058-2597145

Orphan

Consensus_repeat	Method
GACCTGCCCGGCCGGATCGGTGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013363_1

>merge|NZ_CP013363|1|2597058-2597145|CRISPRCasFinder
GACCTGCCCGGCCGGATCGGTGATCTGCTCCGGCAGGTTGTGGTCGTTGTAGCTGATCCGCGTGACCTGCCCGGCCGGATCGATGATC

>NZ_CP013363|1|1|2597058-2597145|CRISPRCasFinder
GACCTGCCCGGCCGGATCGGTGATC	TGCTCCGGCAGGTTGTGGTCGTTGTAGCTGATCCGCGT
GACCTGCCCGGCCGGATCGATGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013363.1\|WP_040138947.1\|2610834_2611203_-\|response-regulator	unknown	unknown	gnl\|CDD\|381124
NZ_CP013363.1\|WP_069227715.1\|2578003_2579566_+\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP013363.1\|WP_069227723.1\|2600490_2602368_-\|type-VI-secretion-system-baseplate-subunit-TssF	unknown	unknown	gnl\|CDD\|377574
NZ_CP013363.1\|WP_059467387.1\|2610215_2610842_-\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|381738
NZ_CP013363.1\|WP_069227725.1\|2605442_2606696_-\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|274593
NZ_CP013363.1\|WP_059594051.1\|2603457_2605431_-\|squalene--hopene-cyclase	unknown	unknown	gnl\|CDD\|239222
NZ_CP013363.1\|WP_069227724.1\|2602746_2603454_-\|phosphorylase	unknown	unknown	gnl\|CDD\|235926
NZ_CP013363.1\|WP_069227717.1\|2581097_2581742_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP013363.1\|WP_059467381.1\|2581867_2582464_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|377516
NZ_CP013363.1\|WP_069227719.1\|2590519_2591443_-\|type-VI-secretion-system-protein-ImpK	unknown	unknown	gnl\|CDD\|236157
NZ_CP013363.1\|WP_069227883.1\|2585418_2586447_+\|ABC-transporter	unknown	unknown	gnl\|CDD\|377309
NZ_CP013363.1\|WP_059467386.1\|2609268_2610219_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP013363.1\|WP_069227718.1\|2586552_2590491_-\|type-VI-secretion-system-membrane-subunit-TssM	unknown	unknown	gnl\|CDD\|274531
NZ_CP013363.1\|WP_069227716.1\|2579686_2581066_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|226930
NZ_CP013363.1\|WP_167359265.1\|2582791_2585422_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|274598
NZ_CP013363.1\|WP_155768823.1\|2593924_2594380_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013363.1\|WP_069227727.1\|2608345_2609230_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|215128
NZ_CP013363.1\|WP_081334362.1\|2591493_2591748_-\|PAAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|269829
NZ_CP013363.1\|WP_059538792.1\|2606700_2607549_-\|presqualene-diphosphate-synthase-HpnD	unknown	unknown	gnl\|CDD\|163278
NZ_CP013363.1\|WP_069227726.1\|2607806_2608139_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013363.1\|WP_040138947.1\|2610834_2611203_-\|response-regulator	gnl\|CDD\|381124	cd17593, REC_CheC-like, phosphoacceptor receiver (REC) domain of uncharacterized response regulators containing a CheC domain. This subfamily is composed of uncharacterized proteins containing an N-terminal REC domain and a C-terminal CheC domain that may function as the output/effector domain of a response regulator. CheC is a CheY-P phosphatase, affecting the level of phosphorylated CheY which controls the sense of flagella rotation and determine swimming behavior of chemotactic bacteria. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.73815e-57
NZ_CP013363.1\|WP_069227715.1\|2578003_2579566_+\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.3028e-56
NZ_CP013363.1\|WP_069227723.1\|2600490_2602368_-\|type-VI-secretion-system-baseplate-subunit-TssF	gnl\|CDD\|377574	pfam05947, T6SS_TssF, Type VI secretion system, TssF. This is a family of Gram-negative bacterial proteins that form part of the type VI pathogenicity secretion system (T6SS), including TssF. TssF is homologs to phage tail proteins and is required for proper assembly of the Hcp tube (the T6SS inner tube) in bacteria.	0
NZ_CP013363.1\|WP_059467387.1\|2610215_2610842_-\|chemotaxis-protein	gnl\|CDD\|381738	cd17910, CheC_ClassII, chemotaxis protein CheC, Class II. This family contains class II CheC proteins found in proteobacteria, which diverge from class I CheCs in sequence conservation and lack critical well-conserved residues for CheD binding. These proteins are likely to be dedicated phosphatases. The class II cheC genes are not found in chemotaxis operons, but in operons containing more archetypical two-component signaling components, non-signaling operons, or as orphans. Thus, class II CheCs appear to be involved in non-chemotactic two component systems. Class II CheCs lack the first of the two phosphatase active sites of class I CheCs, and retain the second active site of class I CheCs.	1.26591e-46
NZ_CP013363.1\|WP_069227725.1\|2605442_2606696_-\|NAD(P)-binding-protein	gnl\|CDD\|274593	TIGR03467, HpnE, squalene-associated FAD-dependent desaturase. The sequences in this family are members of the pfam01593 superfamily of flavin-containing amine oxidases which include the phytoene desaturases. These sequences also include a FAD-dependent oxidoreductase domain, pfam01266. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of squalene, the condensation product of the polyisoprenoid farnesyl pyrophosphate. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnE was assigned. This gene is also found in contexts where the downstream conversion of squalene to hopenes is not evidence. The precise nature of the reaction catalyzed by this enzyme is unknown at this time.	2.24028e-75
NZ_CP013363.1\|WP_059467386.1\|2609268_2610219_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	9.94859e-66
NZ_CP013363.1\|WP_069227724.1\|2602746_2603454_-\|phosphorylase	gnl\|CDD\|235926	PRK07077, PRK07077, phosphorylase.	2.89741e-111
NZ_CP013363.1\|WP_069227717.1\|2581097_2581742_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.38976e-67
NZ_CP013363.1\|WP_059467381.1\|2581867_2582464_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|377516	pfam05494, MlaC, MlaC protein. MlaC is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane. This family of proteins is involved in toluene tolerance, which is mediated by increased cell membrane rigidity resulting from changes in fatty acid and phospholipid compositions, exclusion of toluene from the cell membrane, and removal of intracellular toluene by degradation. Many proteins are involved in these processes.	7.08291e-48
NZ_CP013363.1\|WP_069227719.1\|2590519_2591443_-\|type-VI-secretion-system-protein-ImpK	gnl\|CDD\|236157	PRK08126, PRK08126, hypothetical protein; Provisional.	3.10122e-76
NZ_CP013363.1\|WP_069227883.1\|2585418_2586447_+\|ABC-transporter	gnl\|CDD\|377309	pfam04333, MlaA, MlaA lipoprotein. MlaA is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane. MlaA is required for the intercellular spreading of Shigella flexneri. It is attached to the outer membrane by a lipid anchor.	2.43857e-105
NZ_CP013363.1\|WP_069227718.1\|2586552_2590491_-\|type-VI-secretion-system-membrane-subunit-TssM	gnl\|CDD\|274531	TIGR03348, VI_IcmF, type VI secretion protein IcmF. Members of this protein family are IcmF homologs and tend to be associated with type VI secretion systems. [Cellular processes, Pathogenesis].	0
NZ_CP013363.1\|WP_069227716.1\|2579686_2581066_+\|histidine-kinase	gnl\|CDD\|226930	COG4564, COG4564, Signal transduction histidine kinase [Signal transduction mechanisms].	1.6794e-160
NZ_CP013363.1\|WP_167359265.1\|2582791_2585422_+\|MMPL-family-transporter	gnl\|CDD\|274598	TIGR03480, HpnN, hopanoid biosynthesis associated RND transporter like protein HpnN. The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.	0
NZ_CP013363.1\|WP_059594051.1\|2603457_2605431_-\|squalene--hopene-cyclase	gnl\|CDD\|239222	cd02892, SQCY_1, Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.	0
NZ_CP013363.1\|WP_069227727.1\|2608345_2609230_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|215128	PLN02211, PLN02211, methyl indole-3-acetate methyltransferase.	7.2662e-25
NZ_CP013363.1\|WP_081334362.1\|2591493_2591748_-\|PAAR-domain-containing-protein	gnl\|CDD\|269829	cd14744, PAAR_CT_2, proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension. This domain is found in the PAAR (proline-alanine-alanine-arginine) repeat family of mostly beta- and gamma-proteobacteria, and forms a sharp conical extension on the VgrG spike, a trimeric protein complex of the bacterial type VI secretion system (T6SS). Most members contain C-terminal domain extensions corresponding to several uncharacterized domains such as S-type pyocin, DUF2235, DUF2345 and cytotoxic proteins. However, these terminal domains are exposed to solution, and do not distort the binding site of VgrG. The pointed tip of the PAAR domain is stabilized by a zinc atom positioned close to the cone's vertex and is likely to be important for its integrity during penetration of the target cell envelope. VgrG proteins are orthologous to the central baseplate spikes of bacteriophages with contractile tails, and genes encoding proteins with PAAR motifs have been frequently found immediately downstream from vgrG-like genes.	1.54645e-15
NZ_CP013363.1\|WP_059538792.1\|2606700_2607549_-\|presqualene-diphosphate-synthase-HpnD	gnl\|CDD\|163278	TIGR03465, HpnD, squalene synthase HpnD. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. In the organisms Zymomonas mobilis and Bradyrhizobium japonicum these genes have been characterized as squalene synthases (farnesyl-pyrophosphate ligases). Often, these genes appear in tandem with the HpnC gene which appears to have resulted from an ancient gene duplication event. Presumably these proteins form a heteromeric complex, but this has not yet been experimentally demonstrated.	1.6444e-106

>NZ_CP013363.1|WP_155768823.1|2593924_2594380_-|hypothetical-protein
MQRHVQRSATDDFFWEIAPDRSAYIFLMVFVGGGPLIIALLCVLFVGGWQAHKFLMLSCAIEVVLFVYIRRNLIILRNDVIVVRTMFFARQISIPELIGVRLEAGMEKYTDRFEPMFRLVFVTEFGNVVSNAKLYGQKDLDRVVRFVESRV
>NZ_CP013363.1|WP_081334362.1|2591493_2591748_-|PAAR-domain-containing-protein
MQSFVATLGTLTTHGGEVTSANAGVAINGRIAACVGDSVSCPLHGRGVITHGGFGTINGRQIAHHGSGTSCGATLIVSDGGPTV
>NZ_CP013363.1|WP_069227719.1|2590519_2591443_-|type-VI-secretion-system-protein-ImpK
MTQSANAPKILSARRAFTPPRRPNGTFLSRKNTGQRSSSRRSRPLGPLSPPEDEQARLAAVLGHRNTLLEASRVLLRALVDIPALIDIGHDERLRDLIMDEVRAFERLCVRANIREEHMIGARYCLCTALDEAAMRVLAARGDTSGSVAWAAGALTQRIGEDNQGGSKIYALSLRLLQDDANRWPLLEVIYRIFSLGFEGRYLRGRTFGAHDRVRERIYNAIAVHLPPVPDALSPHAQFAETTQQVSHFEIPVWMSVVLLSVMLCAFYAFCRIELGTQADSVRQQLSDITRVAPRNAIDPPAAGPAQ
>NZ_CP013363.1|WP_069227718.1|2586552_2590491_-|type-VI-secretion-system-membrane-subunit-TssM
MKKILSFLRSRHLWVVLTVVVAAVAIWFAGPLVSFGGLKPFASIDIRLTLIALLLAAWVLWLIDWSTGIVIAALLCLAIWHAFPLLTLAGKPLFASMTARILAMAGIVLVYAVAMSIRSWTRMRRDPNQLRRLLRLGKRGARPLAASRLAEIEDMARVAIMQLKARRGGPRRLSRLFRDSAYLYDVPWYLVLGSKGTGKTTALLNAGLAFPLDVQLQHSLAPNDARALPGWWLTNDAVLIDTTGHYVQHGTSRYSLTVESSGTPNEGKHSKPQAGMSAIRERTDAAEWKGFLRLLRRIRPRLPMNGVLLTINVAALTHTDPDVRAMESGALRARLEEMHAEFGTGFPVWLIVTKMDRLPGFTDYFASSLESERGQIWGVTLRSDPDVQVVDAIRTELNLLTTRLADGVSGLLRSETDPTRRRHLAMLPEAFAALTNPLIDLIEHVFARSGNDASAVPHAMFRGLYLTSAAQTGQQVVADRKTLLQRMIDASGAQPSTRRGERSEISYFLRDLLSGVIFRERRLARPNSNREHRMRLQRWLGHSLVWLIAAGVCVNLWNSFVAERTSLATLGQKVRTLTALLARSDLSANPERVPMVLASASETLRDTARLATGSDVALRIGTHRLDRIESDSRHVYEALSEQVLLPHIVRRVEHVIEDAAARGDAKAAYDALRVYLMFYDSARFNANDVKVWVLDDWSRYDSAAMFGGRAAMIDHVERLFSEGHVVQSPLSRNDGLIRRARTFLDGSLSIDRLYQRAKETMLQDAPDDFSLLRVVGPQAGVVFTRASGAPLSSGVPGIFTREGYRAVFAKRLPAFLRAATDDDAWVMGHRTLGDPPKNPAGPLNVSGPDGDVLVMAITRQYLIEYAQQWDAFLSDVRVVSGTSLAFNLKVLQILAAPDSPLNRLAQAAVGETTLTQPMSKLDGSFLEKATEAVNQKADKILGPRASDQVERELVDRRFAALREVTTGHAGARPDTPLARTLATGAGLNGIATVLNDYYATLTVSDNALLNNNMPPVRDSAARLKMTADTMPAPFRAVLYQLAVDGSRGVNRGIGQLLSRQMQAAVADTCRMTVEGNYPFSPDSKRDVNIDDFQRMFARGGVIDEFFTHTLAPFVDTATKPWRYRTLPGATEPVQGPDLEPFEHARAIRDMFFADPDRRRLSWKADIRIPELDPTVMTLSFDIDGQTTSYQHGPVVPFTVTWPGPRGGVHAEITASPRIRPDTSTIAADGPWALIRLLRKGHVVEAAAPGRTRVTFNFDGREAALDITSAGTVANPLTSDVLTTFRCPGVMSMINLPDSGPPPGLPQGALPAT
>NZ_CP013363.1|WP_069227883.1|2585418_2586447_+|ABC-transporter
MNKVRIIAATVAASAVLSGCATGPNRNPNDPLEPMNRAMYKFNDTVDTNIAVPIAKGYQKITPTPMRTAISNFFSNLGDLGNMANNLLQLRITDATQDLMRVAMNSVFGVGGLIDIATPAGLPKHHQDFGLTMARWGVPSGPYLVLPVFGPSTIRDGVGRAVDVRFNLLNYIEPAARNPMYIAQFISARSDLLGATDLLKQAALDPYSFVRDAYLQQRKSLTYHGQSASAAPPNYIEPGGSGAVPAGTPTVPGLPNYEDPGESGGASSTAPNNAPAAPGLPQYDDPGADGATQASAPASAPASAPAAAPAAASAGATTAPAANGAPIAPAMPTMPASGPAAQ
>NZ_CP013363.1|WP_167359265.1|2582791_2585422_+|MMPL-family-transporter
MVTSLIVRLVAWSVRRPVWVVVLSLVVAAFSSVYVAQHFKINTDISKLVDAEPKWAALGQAVDKAFPQRNGTILAVVEAPAPEFATAAAHTLTEALRKQADAGRIGQVAEPGGGPFFEHNGLLFLSTQEVSDTTTQLASARPLVNELAKNPSLTGLATTLSTTLGQPLLTGQVKLPAMAKLLARSAATVDDVLAGKPAAFSWRGLVDSDAARQPARAFVTVQPVVNYGALKAGAATTQVVRDTAKALGVEQRYGAVVRMTGEQPLADDEFASVEDGAALNGALTLLAVLVILWLALRSKRMIGSVLVTLFVGLVVTAALGLAMVGSLNMISVAFMVLFVGLGVDFSIQYGVKYREERFRDPRIDHALIGAAHSMGMPLALATTAVAASFFSFIPTAYRGVSELGLIAGVGMFVALLTTLTLLPALLRLFAPPGESKTPGFPWLAPVDDFLDRHRKPILIGTLAVVIGALPLLAFLHFDFNPLHLKDPHSESMATLLALKDSPEAAVNDVTLLAPSLAEADAAAKRLDALPEVGRTTTLSTFVPADQPAKRAAIAAAASDLLPALTQPAAPAATDAQRVAALKRVSDLLSYAAEDHPGPGSAAAQHLSASIAKLAAADSATRDRAERAFSDTLRIALDQLATLLQPQDITREALPPQLVRDWIAPDGHALVQISPKVPKGVDPNDDTMLRRFAKAVKAAEPGAIGGPISILHSADTIINAFLHAALWSILSITILLWITLRRFGDVLRTLVPLLVSGLVTLEMCVVLGMSLNFANIIALPLMLGVGVAFKVYFVMAWRAGQTGLLHSSLTHAVLFSAATTATAFGSLWLSHHPGTSSMGKLLALALTCTLIGAVVFQPVLMGKPRVKRAKEPIARKQ
>NZ_CP013363.1|WP_059467381.1|2581867_2582464_-|ABC-transporter-substrate-binding-protein
MKRHLFAFVAAAAVSVSAFAQSAPVDIVRNAVEGTVNAMKADPGARGGDMAKVTQVVEQRFLPATNFERTTRIAVGDAWKQATPQQQQELYKQFKLLMTRTYAASLAQLGGQDAKFSFKAGGASGADALVQSTVTTPGDSQSVGYRLGKVGSDWKIYDIDMSGAWLIQVYQGQFKSQLASGGIDGLIAYLQKHNSRTN
>NZ_CP013363.1|WP_069227717.1|2581097_2581742_+|response-regulator-transcription-factor
MSAPDTTRPAARLLLVDDHPLVRDGLRMRLEAADLSVVGEAGNADEALALAASLEPDLALMDVGMNGMNGITLAGVFHERFPGIRVLMLSMHDNVEYVTQAVRAGASGYLLKDSPASEIVRAIGAVLAGQTFFSEGLAARMIQASAAASPLDRLTPRERDILDALAEGLSSKQIAQQTGLSVRTVETHRLNLKRKLEIEGQAELIKFAVEHRRR
>NZ_CP013363.1|WP_069227716.1|2579686_2581066_+|histidine-kinase
MRLKAKIFLLAIVPFLLAIAGIGFGVRQQATSLARTQHATIQAAYLSSKEVELRHYVELATSAIMPLYDASGRNARDDALLRTQALAMLQKMDFGPDGYFFVYDLHGNALMHPREPERVGHNYWSMRDPQGALTIQQLIGAASRGGGYVRYTWQRPSTGKAAPKLGYVVALERWGWMVGTGIYLDDVDTALQRIDARASANIERTMSWLTAIALTGAAVIAVCALVLNVSESRSADAKLKQLAQRVVESQEQERARLSRELHDGISQMMVSAKLMLESALARFERGATRMTEAEQALASGIGRLGDTLREVRRISHALRPAMLDDLGLAAALEQLVRELGAESGIDIGYTQVAHSGARPLPAPVNTALFRIAQEALSNIVHHAQASRAAVTLDVGAHSVTLTIADNGCGFDAERSQTDARRGIGLRNMRERLDALGGTLTITSQVGHTVVAARVPLRAA
>NZ_CP013363.1|WP_069227715.1|2578003_2579566_+|sensor-domain-containing-diguanylate-cyclase
MAETDYAMPSESGLTGRIAAQLRRVLLPHLIFYSGLLIALLLLLLCAIVLYEGRIDARDLARTTQENIALMASWDIERNIEIYSLSLQAVVDGSNDPAVATLPMSLRRQVLFDRATTAKYLGGIYVLDANGDIAVDGMSDVPRKANFGNEPYFTVHRDHPNVGLYVSDPYHSRLRGGSLSIALSRRITRPDGSFGGVAVMSIRLEYFQNLFSRLALGDRGSVALINTDGRMVARKPYDPAIVGRDISKASTFRHFMTANEGSFADTASIDGVRRLYVFRHLDNLPLIIMVARSEADTYAAWYDRAIPIGSAMVMLALGFVGLSLLLDVQLRKRHRAEAELRALARTDGLTGLDNRRMLDVTLEREWRRAARSQHALSLLFVDVDHFKRYNDTQGHQAGDDALAAVGRCIAGCLRRPADYAARYGGEEFVVVLPDVDTAGAVAIAEAVRTGILDLGIRHAAGSSDRLTASIGVTTCYPERGDSIQAALKLADDALYRAKERGRNRVVVQTAASVDRTPRRA
>NZ_CP013363.1|WP_069227723.1|2600490_2602368_-|type-VI-secretion-system-baseplate-subunit-TssF
MNPHLLEAYNRELLYFKELMEEFAQAHPKIARRLGVHAGEIADPFVERLVQAASFTTARLQLKLDAECPLLTGRLLETVYPNYVAPTPSIAVARLYPDEREGSLLEGFCVPRGTEFASRVPDGERTSCTFRSGLDVMLYPLEIVSARLTGVPPDIPSIERYTVAHRSIRGALRLRLRTTGGVRFDELRGLDRLPVHLAGDECVASRLFELIHAGAVSSVTGAPDRFADTDQKLGIVSDRVVEYTGLATDETLLPLAGSKFHGHNLLHEYAAFPARFWFFTLTGLDAGLRYVTDREAEIVVLLDRFDSALAEHVDASRFALFCTPLINLFRRKTDPAEIPRAGGEILLQPDKQNGSDYEVFAVEALHGFVSQGAASLEFRPLYRALRNDESNHGCYFTTRREHRMAKTSYRRYGTRASYTGTDVFVSLVDQDEAPFPQAMKYLSVDAWLTNGALPSLLTPDGATDLTVGISAPVSRTGLIRAPSLARAPLAQRGAAWRLIGQLNLGYGLLEAQDGSRLRDILALFAAADDVRYRRQIDSLIRVDTSPVTKKLPGQSQLRFGRGIECVLTVDEAGFDGVSPYLFGVVLEHYVARHVSTHSFTQSVLRSTQRGELMRWPVRTGTRSAV
>NZ_CP013363.1|WP_069227724.1|2602746_2603454_-|phosphorylase
MAPTQHNGTLPVIAVTGMAFEARIARGHGVEAVFAARADRLERALAEATARGCAGIVSFGTAGGLAPDLAPGALVIADAIDGPFGRVKTDPGWSARLVAALHDTPVWARVTRGTMAAVGAPVVSEQEKTSLHRTKGALAVDMESHIAAAFAASRGVPFAVCRAIVDPAWRTLPRAATAGLRDDGSTAILPILRELLKQPSQLGPLLQVAGDARAARTTLIQARHAFERAGAMRIV
>NZ_CP013363.1|WP_059594051.1|2603457_2605431_-|squalene--hopene-cyclase
MNDLTDMATLSAGTVPAGLDAAVASATDALLAAQNADGHWVYELEADSTIPAEYVLLVHYLGETPNLELEQKIGRYLRRIQQADGGWPLFTDGAPNISASVKAYFALKVIGDDENAEHMQRARRAIHAMGGAEMSNVFTRIQLALYGAIPWRAVPMMPVEIMLLPQWFPFHLSKVSYWARTVIVPLLVLNAKRPIAKNPRGVRIDELFIDPPVNAGLLPRQGHQSPGWFAFFRVVDHALRAVDGLFPSYTRERAIRQAVSFVDERLNGEDGLGAIYPAMANAVMMYDVLGYAEDHPNRAIARKSVEKLLVVHEDEAYCQPCLSPVWDTSLVAHALLETGDARAEEAVLRGLDWLRPLQILDVRGDWISRRPNVRPGGWAFQYANAHYPDVDDTAVVVMAMDRAQKLKQTDAYRESMARAREWVVGMQSSDGGWGAFEPENTQYYLNNIPFSDHGALLDPPTADVSGRCLSMLSQLGESALNSEPARRALDYMLKEQEPDGSWYGRWGMNYIYGTWTALCSLNAAGLTPDDPRVKRGAQWLLSIQNKDGGWGEDGDSYKLNYRGFEQAPSTASQTAWALLGLMAAGEVNNPAVARGVDYLIAQQNEEGLWDETRFTATGFPRVFYLRYHGYRKFFPLWALARYRNLKRANATRVTVGM
>NZ_CP013363.1|WP_069227725.1|2605442_2606696_-|NAD(P)-binding-protein
MPRTVHVIGAGLAGLSAAVELQRRGRRIVLHDAHAHAGGRCRSWFDGALNTTLDSGLHQVFAGQSATQRYLRAVGAADQLAGPALPEYPVVDVASQQRWTLRFGNGRWPSWLFDAASRAPGTTPLDYLALAPLAFARTGRSLAQTMRCDGVLWDRWLRPYFLGVLNVEPRHASAELARAALRDAFAAGGPGWRPLVARHGLGSAFVEPALRMLQHGGAQIRLNSRLDAFEFGAHGNAVDAVAIGGERVDLAPGDAVVLAVPPEVAQPLVPDLAAPDTFSAAVTAYFAVDTPAGSPLQTSVVNGVVDAVRTGGGPLAATIRDAARWLDMPRDVLARRIWEDVARVTGANPETLPAWQLVVEPRAGFAAVPSQEMKRPAVRTRWTNLVLAGDWIATGLPATIEGAIRSGQLAADVLQTQ
>NZ_CP013363.1|WP_059538792.1|2606700_2607549_-|presqualene-diphosphate-synthase-HpnD
MAVSNLVVDEQETDAAAVTSGSSFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLDRWRADIDACFAGQPPRHLIALEREIRAFDLKREDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGRLSVRIFGIPEAEGIELSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDPATIVRDPALPRVCATLVERALEHFRAADAVMDTCTRAQVKAPRIMSGAYRCILDAAIARGFAAPRAPLRKPKARMLMIAARYALF
>NZ_CP013363.1|WP_069227726.1|2607806_2608139_-|hypothetical-protein
MNVDYLFYRRPDKPGPYSLDDLGEIAPPIGPSDMVRAGIARVFEQIDWQESPDVPGAWFGTGGPSFQFTAEPDGRVTSFMGSRLERRSMLQLTREMELIALDLQRDIVYG
>NZ_CP013363.1|WP_069227727.1|2608345_2609230_+|alpha/beta-fold-hydrolase
METNVTAAAQSDHPVFVLVHGAWHGAWCYAHVAAALAARGYLSIARDLPAHGINARFPASYLERPLDEDAFGAEPSPVANTSLDDYATQVMQAVDDAYALGRGKVVLVGHSMGGLAITAAAERAPEKIAKIVYLAAFMPASGVPGLDYVRAPENKGEMLGPMMLASPRVAGALRIDPRSGDAAYRQLAKRALYDDVPQADFDAVANLMTCDVPAAPFATAIPTTAARWGAIDRHYIKCLADRVILPALQQRFIDEADAFVPGNPTHVHQLDSSHSPFVSQPAVLAGVLADIAKS
>NZ_CP013363.1|WP_059467386.1|2609268_2610219_-|diguanylate-cyclase
MNATPTTAAASLSDLVIERVGFGLFVLDRAMNVLMWNRFMQDHSGIPAADVIGRNLFDRFPELPRAWLERKLESVFQLGSFAFSSWEQRPYLFRFEHDRPITGGVDYMQQDCTFMPLTRGREVEAVCVTISDVTHVSVMQREREEAVAKLREHANRDGLTGIANRRFFEARLSDEFARWQRYGGDLSVLLFDLDHFKTINDRFGHAAGDAVLRETARRVASIVRAQDTFGRFGGEEFALLLPCTNLDEAMRVADKVRDAIGSTPVDAEGVSVPVTASVGGACATAGAAAFDALVNEADTALYRAKRLGRDRSVAYA
>NZ_CP013363.1|WP_059467387.1|2610215_2610842_-|chemotaxis-protein
MPESVFTAEQRDALQEIANLAMGRAAARLALLLGHFIELSVPRVRVVKAADAGDALREMTGIHENVTAVRQGFRSDIKGEAIVLCRSAGVARLMSLMDRTFGDGVYAGMATQDELVFDVSNVLMSACVASILDELGRKPVFFPPGLLGANVSFDDVFQPNALAWSVALLLEVNFGLEDHAFRAHFVMLMAEDSIRLMGDALDALLSAL
>NZ_CP013363.1|WP_040138947.1|2610834_2611203_-|response-regulator
MPLPIVIADDSLLARKLLTKALPGDWDVDVAYAANGREALALYRDGKASVMFLDLTMPDMNGYQVLETLRHEDLNTFVIVVSADIQPQAQARVRELGAIAFVAKPVTSEALLPILKEYGLYA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1669758 : 1713887

Burkholderia_phage(38.89%)

plate,protease,portal,tail,terminase,holin,capsid,integrase,head

attL 1666584:1666604|attR 1714109:1714129

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1666584:1666604	attL	NA	NA	NA	NA
WP_069227253.1\|1669758_1670439_-	hypothetical protein	Q8W6R8	Burkholderia_virus	2.0e-95	72.6
WP_069227254.1\|1670522_1670978_+	hypothetical protein	C7BGE3	Burkholderia_phage	3.4e-30	45.3
WP_069227255.1\|1671198_1674144_-	class I SAM-dependent DNA methyltransferase	Q6NE04	Leptospira_phage	1.4e-39	25.5
WP_059464567.1\|1674566_1674974_+	PAAR domain-containing protein	Q8W6S2	Burkholderia_virus	3.4e-13	42.2
WP_059464566.1\|1674978_1675482_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.9e-21	45.4
WP_059464565.1\|1675829_1676441_+	hypothetical protein	NA	NA	NA	NA
WP_069227256.1\|1676453_1677164_+	LysR family transcriptional regulator	A4PE26	Ralstonia_virus	3.8e-36	38.5
WP_069227257.1\|1677202_1677991_-	DNA adenine methylase	Q8W6S4	Burkholderia_virus	1.5e-145	91.2
WP_069227258.1\|1678160_1678655_-	DUF2514 family protein	C7BGD9	Burkholderia_phage	1.9e-34	54.4
WP_069227259.1\|1678651_1679071_-	glycoside hydrolase family protein	A0A1Q1PW74	Pseudoalteromonas_phage	1.3e-23	44.7
WP_069227260.1\|1679063_1679357_-\|holin	holin	C7BGD7	Burkholderia_phage	2.4e-37	90.2
WP_069227261.1\|1679433_1680483_-	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	2.7e-83	47.9
WP_069227262.1\|1680492_1680699_-\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	6.9e-15	62.7
WP_069227263.1\|1680673_1681552_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	3.0e-35	37.1
WP_069227264.1\|1681562_1684001_-\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	8.4e-59	33.9
WP_069227265.1\|1684090_1684393_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_069227266.1\|1684491_1684998_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	1.1e-42	51.9
WP_069227267.1\|1685007_1686177_-\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	7.9e-156	70.8
WP_069227268.1\|1686255_1687017_-\|tail	phage tail protein	E5E3Q6	Burkholderia_phage	1.3e-55	54.8
WP_059542506.1\|1689075_1689654_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	5.1e-31	43.4
WP_069227270.1\|1689643_1690540_-\|plate	baseplate J protein	S4TNY7	Salmonella_phage	1.8e-46	40.4
WP_069227271.1\|1690536_1690872_-\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	8.6e-23	47.2
WP_069227272.1\|1690871_1691072_-	hypothetical protein	NA	NA	NA	NA
WP_069227273.1\|1691131_1691812_-\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	4.9e-17	29.8
WP_069227274.1\|1691815_1692340_-	hypothetical protein	A0A1B2LRU9	Wolbachia_phage	1.1e-24	43.0
WP_069227275.1\|1692329_1692860_-\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	4.9e-12	29.9
WP_059546359.1\|1692862_1693153_-	hypothetical protein	NA	NA	NA	NA
WP_069227276.1\|1693154_1694150_-\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	4.4e-115	60.3
WP_069227277.1\|1694225_1694570_-\|head	head decoration protein	NA	NA	NA	NA
WP_069227278.1\|1694600_1695710_-\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	1.6e-52	39.1
WP_069227279.1\|1695711_1697199_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	1.5e-130	50.6
WP_011657129.1\|1697195_1697402_-	hypothetical protein	NA	NA	NA	NA
WP_069227280.1\|1697411_1699523_-\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	8.9e-182	54.1
WP_059540501.1\|1700442_1700697_+	hypothetical protein	NA	NA	NA	NA
WP_069227282.1\|1700835_1701243_-	hypothetical protein	C7BGG3	Burkholderia_phage	1.4e-30	48.1
WP_081334326.1\|1701255_1702230_-	helix-turn-helix domain-containing protein	C7BGG2	Burkholderia_phage	7.0e-65	43.6
WP_069227283.1\|1702232_1703594_-	replicative DNA helicase	C7BGG1	Burkholderia_phage	1.2e-142	57.5
WP_069227284.1\|1703592_1703940_+	hypothetical protein	NA	NA	NA	NA
WP_069227285.1\|1703979_1704501_-	hypothetical protein	C7BGG0	Burkholderia_phage	2.4e-48	62.1
WP_069227286.1\|1704969_1705218_-	Cro/Cl family transcriptional regulator	C7BGF8	Burkholderia_phage	8.8e-33	87.0
WP_081334328.1\|1705303_1705702_+	hypothetical protein	C7BGF7	Burkholderia_phage	8.6e-54	78.9
WP_069227289.1\|1707131_1707956_+	ParB N-terminal domain-containing protein	C7BGF1	Burkholderia_phage	9.2e-135	89.4
WP_081334329.1\|1707980_1708220_+	AlpA family phage regulatory protein	C7BGF0	Burkholderia_phage	2.6e-37	93.7
WP_155768807.1\|1710059_1710788_-	hypothetical protein	NA	NA	NA	NA
WP_069227291.1\|1710791_1711535_-	hypothetical protein	NA	NA	NA	NA
WP_069227292.1\|1711733_1712456_+	hypothetical protein	NA	NA	NA	NA
WP_069227293.1\|1712612_1713887_-\|integrase	site-specific integrase	C7BGE7	Burkholderia_phage	2.1e-234	90.8
1714109:1714129	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013362

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP013363

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection