Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP016855 Staphylococcus aureus subsp. aureus strain 5118.N chromosome, complete genome 10 crisprs csa3,cas3,DinG,DEDDh,WYL 11 4 11 1
NZ_CP016854 Staphylococcus aureus subsp. aureus strain 5118.N plasmid p5118.Nb, complete sequence 0 crisprs csa3 0 0 0 0
NZ_CP025482 Staphylococcus aureus subsp. aureus strain 5118.N plasmid p5118.Na, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP016855
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_1 41702-41780 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_2 1115328-1115636 Orphan NA
4 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_3 1178339-1178420 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_4 1214307-1214399 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_5 1221664-1221749 Unclear NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_6 1397522-1397614 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_7 1641857-1641958 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_8 2114601-2114774 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_9 2555713-2555906 Orphan NA
3 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016855_10 2679696-2679846 Orphan NA
2 spacers
csa3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP016855_3 3.1|1178363|34|NZ_CP016855|CRISPRCasFinder 1178363-1178396 34 NZ_CP016855.1 599297-599330 0 1.0
NZ_CP016855_3 3.1|1178363|34|NZ_CP016855|CRISPRCasFinder 1178363-1178396 34 NZ_CP016855.1 689404-689437 0 1.0
NZ_CP016855_8 8.1|2114654|17|NZ_CP016855|PILER-CR 2114654-2114670 17 NZ_CP016855.1 1227088-1227104 0 1.0
NZ_CP016855_8 8.1|2114654|17|NZ_CP016855|PILER-CR 2114654-2114670 17 NZ_CP016855.1 1227143-1227159 0 1.0
NZ_CP016855_8 8.1|2114654|17|NZ_CP016855|PILER-CR 2114654-2114670 17 NZ_CP016855.1 1227198-1227214 0 1.0
NZ_CP016855_8 8.1|2114654|17|NZ_CP016855|PILER-CR 2114654-2114670 17 NZ_CP016855.1 1758339-1758355 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 30820-30835 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 30878-30893 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 599269-599284 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 685053-685068 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 689450-689465 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 897575-897590 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 998203-998218 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 1178066-1178081 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 1680579-1680594 0 1.0
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 2280058-2280073 0 1.0
NZ_CP016855_9 9.2|2555792|36|NZ_CP016855|CRT 2555792-2555827 36 NZ_CP016855.1 897628-897663 0 1.0
NZ_CP016855_1 1.1|41725|33|NZ_CP016855|CRISPRCasFinder 41725-41757 33 NZ_CP016855.1 420129-420161 1 0.97
NZ_CP016855_1 1.1|41725|33|NZ_CP016855|CRISPRCasFinder 41725-41757 33 NZ_CP016855.1 689450-689482 1 0.97
NZ_CP016855_1 1.1|41725|33|NZ_CP016855|CRISPRCasFinder 41725-41757 33 NZ_CP016855.1 897575-897607 1 0.97
NZ_CP016855_1 1.1|41725|33|NZ_CP016855|CRISPRCasFinder 41725-41757 33 NZ_CP016855.1 1221651-1221683 1 0.97
NZ_CP016855_1 1.1|41725|33|NZ_CP016855|CRISPRCasFinder 41725-41757 33 NZ_CP016855.1 2280041-2280073 1 0.97
NZ_CP016855_2 2.2|1115441|26|NZ_CP016855|CRT 1115441-1115466 26 NZ_CP016855.1 1221638-1221663 1 0.962
NZ_CP016855_5 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder 1221694-1221719 26 NZ_CP016855.1 1258812-1258837 1 0.962
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 241568-241583 1 0.938
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 420146-420161 1 0.938
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 643397-643412 1 0.938
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 901543-901558 1 0.938
NZ_CP016855_8 8.2|2114724|16|NZ_CP016855|PILER-CR 2114724-2114739 16 NZ_CP016855.1 2466534-2466549 1 0.938
NZ_CP016855_9 9.2|2555792|36|NZ_CP016855|CRT 2555792-2555827 36 NZ_CP016855.1 241679-241714 1 0.972
NZ_CP016855_1 1.1|41725|33|NZ_CP016855|CRISPRCasFinder 41725-41757 33 NZ_CP016855.1 599252-599284 2 0.939
NZ_CP016855_2 2.2|1115441|26|NZ_CP016855|CRT 1115441-1115466 26 NZ_CP016855.1 1680599-1680624 2 0.923
NZ_CP016855_2 2.4|1115555|26|NZ_CP016855|CRT 1115555-1115580 26 NZ_CP016855.1 1258812-1258837 2 0.923
NZ_CP016855_2 2.5|1115581|33|NZ_CP016855|CRISPRCasFinder 1115581-1115613 33 NZ_CP016855.1 1178059-1178091 2 0.939
NZ_CP016855_5 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder 1221694-1221719 26 NZ_CP016855.1 1258756-1258781 2 0.923
NZ_CP016855_8 8.1|2114654|17|NZ_CP016855|PILER-CR 2114654-2114670 17 NZ_CP016854.1 38027-38043 2 0.882
NZ_CP016855_9 9.1|2555736|33|NZ_CP016855|CRT 2555736-2555768 33 NZ_CP016855.1 689450-689482 2 0.939
NZ_CP016855_9 9.1|2555736|33|NZ_CP016855|CRT 2555736-2555768 33 NZ_CP016855.1 897575-897607 2 0.939
NZ_CP016855_9 9.1|2555736|33|NZ_CP016855|CRT 2555736-2555768 33 NZ_CP016855.1 1221651-1221683 2 0.939
NZ_CP016855_9 9.1|2555736|33|NZ_CP016855|CRT 2555736-2555768 33 NZ_CP016855.1 2280041-2280073 2 0.939
NZ_CP016855_9 9.2|2555792|36|NZ_CP016855|CRT 2555792-2555827 36 NZ_CP016855.1 30919-30954 2 0.944
NZ_CP016855_9 9.2|2555792|36|NZ_CP016855|CRT 2555792-2555827 36 NZ_CP016855.1 420187-420222 2 0.944
NZ_CP016855_9 9.3|2555851|33|NZ_CP016855|CRT 2555851-2555883 33 NZ_CP016855.1 599252-599284 2 0.939
NZ_CP016855_9 9.3|2555851|33|NZ_CP016855|CRT 2555851-2555883 33 NZ_CP016855.1 689450-689482 2 0.939
NZ_CP016855_9 9.3|2555851|33|NZ_CP016855|CRT 2555851-2555883 33 NZ_CP016855.1 897575-897607 2 0.939
NZ_CP016855_9 9.3|2555851|33|NZ_CP016855|CRT 2555851-2555883 33 NZ_CP016855.1 1221651-1221683 2 0.939
NZ_CP016855_9 9.3|2555851|33|NZ_CP016855|CRT 2555851-2555883 33 NZ_CP016855.1 2280041-2280073 2 0.939

1. spacer 3.1|1178363|34|NZ_CP016855|CRISPRCasFinder matches to position: 599297-599330, mismatch: 0, identity: 1.0

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagagaaattggattcccaat	Protospacer
**********************************

2. spacer 3.1|1178363|34|NZ_CP016855|CRISPRCasFinder matches to position: 689404-689437, mismatch: 0, identity: 1.0

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagagaaattggattcccaat	Protospacer
**********************************

3. spacer 8.1|2114654|17|NZ_CP016855|PILER-CR matches to position: 1227088-1227104, mismatch: 0, identity: 1.0

aagaatttcgaaaagaa	CRISPR spacer
aagaatttcgaaaagaa	Protospacer
*****************

4. spacer 8.1|2114654|17|NZ_CP016855|PILER-CR matches to position: 1227143-1227159, mismatch: 0, identity: 1.0

aagaatttcgaaaagaa	CRISPR spacer
aagaatttcgaaaagaa	Protospacer
*****************

5. spacer 8.1|2114654|17|NZ_CP016855|PILER-CR matches to position: 1227198-1227214, mismatch: 0, identity: 1.0

aagaatttcgaaaagaa	CRISPR spacer
aagaatttcgaaaagaa	Protospacer
*****************

6. spacer 8.1|2114654|17|NZ_CP016855|PILER-CR matches to position: 1758339-1758355, mismatch: 0, identity: 1.0

aagaatttcgaaaagaa	CRISPR spacer
aagaatttcgaaaagaa	Protospacer
*****************

7. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 30820-30835, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

8. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 30878-30893, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

9. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 599269-599284, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

10. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 685053-685068, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

11. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 689450-689465, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

12. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 897575-897590, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

13. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 998203-998218, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

14. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 1178066-1178081, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

15. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 1680579-1680594, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

16. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 2280058-2280073, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

17. spacer 9.2|2555792|36|NZ_CP016855|CRT matches to position: 897628-897663, mismatch: 0, identity: 1.0

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcaaaaagaaattctacagacaatgca	Protospacer
************************************

18. spacer 1.1|41725|33|NZ_CP016855|CRISPRCasFinder matches to position: 420129-420161, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttactataatg	Protospacer
************************** ******

19. spacer 1.1|41725|33|NZ_CP016855|CRISPRCasFinder matches to position: 689450-689482, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
**************************.******

20. spacer 1.1|41725|33|NZ_CP016855|CRISPRCasFinder matches to position: 897575-897607, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
**************************.******

21. spacer 1.1|41725|33|NZ_CP016855|CRISPRCasFinder matches to position: 1221651-1221683, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
**************************.******

22. spacer 1.1|41725|33|NZ_CP016855|CRISPRCasFinder matches to position: 2280041-2280073, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
**************************.******

23. spacer 2.2|1115441|26|NZ_CP016855|CRT matches to position: 1221638-1221663, mismatch: 1, identity: 0.962

tcgccagcttctgtgttggggccccg	CRISPR spacer
tcgtcagcttctgtgttggggccccg	Protospacer
***.**********************

24. spacer 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder matches to position: 1258812-1258837, mismatch: 1, identity: 0.962

cggggccccaacacagaagctggcgg	CRISPR spacer
cggggccccaacacagaagcaggcgg	Protospacer
******************** *****

25. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 241568-241583, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagctttcaataatg	Protospacer
******* ********

26. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 420146-420161, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttactataatg	Protospacer
********* ******

27. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 643397-643412, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacaacaatg	Protospacer
***********.****

28. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 901543-901558, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacaaaaatg	Protospacer
*********** ****

29. spacer 8.2|2114724|16|NZ_CP016855|PILER-CR matches to position: 2466534-2466549, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacaacaatg	Protospacer
***********.****

30. spacer 9.2|2555792|36|NZ_CP016855|CRT matches to position: 241679-241714, mismatch: 1, identity: 0.972

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcgaaaagaaattctacagacaatgca	Protospacer
***********.************************

31. spacer 1.1|41725|33|NZ_CP016855|CRISPRCasFinder matches to position: 599252-599284, mismatch: 2, identity: 0.939

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagatgacgaaaagtcagcttacaataatg	Protospacer
****** *******************.******

32. spacer 2.2|1115441|26|NZ_CP016855|CRT matches to position: 1680599-1680624, mismatch: 2, identity: 0.923

tcgccagcttctgtgttggggccccg	CRISPR spacer
tcgtcagcttctttgttggggccccg	Protospacer
***.******** *************

33. spacer 2.4|1115555|26|NZ_CP016855|CRT matches to position: 1258812-1258837, mismatch: 2, identity: 0.923

ccgccagcctctgtgttggggccccg	CRISPR spacer
ccgcctgcttctgtgttggggccccg	Protospacer
***** **.*****************

34. spacer 2.5|1115581|33|NZ_CP016855|CRISPRCasFinder matches to position: 1178059-1178091, mismatch: 2, identity: 0.939

ccaacttgcacactattgtaagctgactttcca	CRISPR spacer
ccaacttgcacattattgtaagctgacttacca	Protospacer
************.**************** ***

35. spacer 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder matches to position: 1258756-1258781, mismatch: 2, identity: 0.923

cggggccccaacacagaagctggcgg	CRISPR spacer
cggggccccaacatagaagcaggcgg	Protospacer
*************.****** *****

36. spacer 8.1|2114654|17|NZ_CP016855|PILER-CR matches to position: 38027-38043, mismatch: 2, identity: 0.882

aagaatttcgaaaagaa	CRISPR spacer
aagaattttcaaaagaa	Protospacer
********. *******

37. spacer 9.1|2555736|33|NZ_CP016855|CRT matches to position: 689450-689482, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

38. spacer 9.1|2555736|33|NZ_CP016855|CRT matches to position: 897575-897607, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

39. spacer 9.1|2555736|33|NZ_CP016855|CRT matches to position: 1221651-1221683, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

40. spacer 9.1|2555736|33|NZ_CP016855|CRT matches to position: 2280041-2280073, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

41. spacer 9.2|2555792|36|NZ_CP016855|CRT matches to position: 30919-30954, mismatch: 2, identity: 0.944

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcgaaaggaaattctacagacaatgca	Protospacer
***********.***.********************

42. spacer 9.2|2555792|36|NZ_CP016855|CRT matches to position: 420187-420222, mismatch: 2, identity: 0.944

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcgaaaagaaattctacaggcaatgca	Protospacer
***********.****************.*******

43. spacer 9.3|2555851|33|NZ_CP016855|CRT matches to position: 599252-599284, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagatgacgaaaagtcagcttacaataatg	Protospacer
******.*************** **********

44. spacer 9.3|2555851|33|NZ_CP016855|CRT matches to position: 689450-689482, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

45. spacer 9.3|2555851|33|NZ_CP016855|CRT matches to position: 897575-897607, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

46. spacer 9.3|2555851|33|NZ_CP016855|CRT matches to position: 1221651-1221683, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

47. spacer 9.3|2555851|33|NZ_CP016855|CRT matches to position: 2280041-2280073, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP016855_2 2.1|1115358|53|NZ_CP016855|CRT 1115358-1115410 53 MG543995 Staphylococcus phage UPMK_1, partial genome 76246-76298 4 0.925
NZ_CP016855_2 2.2|1115441|26|NZ_CP016855|CRT 1115441-1115466 26 NZ_CP022541 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence 333735-333760 5 0.808
NZ_CP016855_5 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder 1221694-1221719 26 NZ_CP022541 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence 333735-333760 5 0.808
NZ_CP016855_5 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder 1221694-1221719 26 NZ_CP034332 Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence 3359-3384 5 0.808
NZ_CP016855_5 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder 1221694-1221719 26 NZ_CP022605 Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence 715511-715536 5 0.808
NZ_CP016855_1 1.1|41725|33|NZ_CP016855|CRISPRCasFinder 41725-41757 33 NC_021536 Synechococcus phage S-IOM18 genomic sequence 159745-159777 10 0.697

1. spacer 2.1|1115358|53|NZ_CP016855|CRT matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 4, identity: 0.925

ttgggagtgggacagaaatgatattttcgcaaaatttatttcgtcgtcccacc	CRISPR spacer
aagggagtgggacagaaatgatagtttctcaaaatttatttcgtcgtcccacc	Protospacer
  ********************* **** ************************

2. spacer 2.2|1115441|26|NZ_CP016855|CRT matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

tcgccagcttctgtgttggggccccg	CRISPR spacer
acgccagcttctgtgttgaggcctta	Protospacer
 *****************.****...

3. spacer 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

cggggccccaacacagaagctggcgg	CRISPR spacer
taaggcctcaacacagaagctggcgt	Protospacer
...****.***************** 

4. spacer 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder matches to NZ_CP034332 (Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.808

cggggccccaacacagaagctggcgg	CRISPR spacer
gtaggcccagacacagaagctggcgg	Protospacer
  .***** .****************

5. spacer 5.1|1221694|26|NZ_CP016855|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

cggggccccaacacagaagctggcgg	CRISPR spacer
tcagggccaaacacagaagctggcgg	Protospacer
. .** ** *****************

6. spacer 1.1|41725|33|NZ_CP016855|CRISPRCasFinder matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 10, identity: 0.697

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
aggtgcttgacgaaaactcaccttacgataaaa	Protospacer
 .* . .********* *** ********** .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 51731 : 126644 92 Staphylococcus_phage(73.91%) tRNA,terminase,capsid,transposase,plate,head,integrase,tail,portal,holin attL 43570:43587|attR 70749:70766
DBSCAN-SWA_2 157304 : 220761 65 Staphylococcus_phage(94.23%) protease,transposase NA
DBSCAN-SWA_3 223921 : 236650 6 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_4 362106 : 371149 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_5 440286 : 448598 7 Caulobacter_phage(16.67%) tRNA NA
DBSCAN-SWA_6 988240 : 996713 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_7 1016699 : 1064283 48 Enterococcus_phage(20.0%) bacteriocin,protease NA
DBSCAN-SWA_8 1161029 : 1176857 21 Staphylococcus_phage(64.71%) integrase,capsid attL 1160350:1160366|attR 1174305:1174321
DBSCAN-SWA_9 1255622 : 1270353 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_10 1282325 : 1290145 10 Pandoravirus(16.67%) NA NA
DBSCAN-SWA_11 2801634 : 2859304 80 Staphylococcus_phage(97.18%) terminase,capsid,head,protease,integrase,tail,portal,holin attL 2815501:2815518|attR 2840432:2840449
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP016855.1|WP_001790641.1|1266668_1266770_-|hypothetical-protein 1266668_1266770_- 33 aa aa NA NA NA 1255622-1270353 yes
2. NZ_CP016854
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage