CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP011362	Salimicrobium jeotgali strain MJ3 plasmid pSJ52, complete sequence	0 crisprs	NA	0	0
NZ_CP011363	Salimicrobium jeotgali strain MJ3 plasmid pSJ25, complete sequence	0 crisprs	NA	0	0
NZ_CP011361	Salimicrobium jeotgali strain MJ3 chromosome, complete genome	3 crisprs	cas9,DinG,RT,DEDDh,cas3,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,WYL,PrimPol	5	6

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011361_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011361_1

473234-473312

Orphan

Consensus_repeat	Method
AATCGTTCCCTTCACACCTGTTAAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011361_1

>merge|NZ_CP011361|1|473234-473312|CRISPRCasFinder
AATCGTTCCCTTCACACCTGTTAAAAGTCTCCGAAGGTAACGATTACTGAACAATCGTTCCCTTCACACCTGTTGAAAG

>NZ_CP011361|1|1|473234-473312|CRISPRCasFinder
AATCGTTCCCTTCACACCTGTTAAAAG	TCTCCGAAGGTAACGATTACTGAAC
AATCGTTCCCTTCACACCTGTTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011361.2\|WP_008590432.1\|472331_472667_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP011361.2\|WP_008590416.1\|482306_482780_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|370045
NZ_CP011361.2\|WP_143023826.1\|465221_465368_-\|lmo0937-family-membrane-protein	unknown	unknown	unknown
NZ_CP011361.2\|WP_008590452.1\|463238_464060_+\|flagellar-hook-basal-body-protein	unknown	unknown	gnl\|CDD\|227125
NZ_CP011361.2\|WP_008590422.1\|477652_479143_+\|tripartite-tricarboxylate-transporter-permease	unknown	unknown	gnl\|CDD\|225870
NZ_CP011361.2\|WP_008590435.1\|469048_472114_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP011361.2\|WP_008590425.1\|477177_477636_+\|tripartite-tricarboxylate-transporter-TctB-family-protein	unknown	unknown	gnl\|CDD\|377815
NZ_CP011361.2\|WP_008590436.1\|467911_469048_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP011361.2\|WP_008590427.1\|476093_477110_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225722
NZ_CP011361.2\|WP_008590429.1\|475280_475946_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP011361.2\|WP_008590442.1\|465952_466843_-\|NERD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377990
NZ_CP011361.2\|WP_008590419.1\|481208_482306_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340828
NZ_CP011361.2\|WP_008590444.1\|465479_465902_+\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP011361.2\|WP_008590447.1\|464964_465207_+\|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl\|CDD\|378713
NZ_CP011361.2\|WP_040609424.1\|467203_467821_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011361.2\|WP_040609437.1\|464124_464946_+\|flagellar-hook-basal-body-protein	unknown	unknown	gnl\|CDD\|227125
NZ_CP011361.2\|WP_008590420.1\|479792_481190_+\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|372600
NZ_CP011361.2\|WP_008590430.1\|473700_475284_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP011361.2\|WP_008590413.1\|482776_483256_+\|exopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|227350
NZ_CP011361.2\|WP_008590411.1\|483293_484178_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131

Protein	Function_ID	Function_description	E-value
NZ_CP011361.2\|WP_008590432.1\|472331_472667_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.26961e-13
NZ_CP011361.2\|WP_008590416.1\|482306_482780_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|370045	pfam08660, Alg14, Oligosaccharide biosynthesis protein Alg14 like. Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane.	1.70094e-27
NZ_CP011361.2\|WP_008590429.1\|475280_475946_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	2.00604e-84
NZ_CP011361.2\|WP_008590452.1\|463238_464060_+\|flagellar-hook-basal-body-protein	gnl\|CDD\|227125	COG4786, FlgG, Flagellar basal body rod protein [Cell motility and secretion].	2.08118e-64
NZ_CP011361.2\|WP_008590422.1\|477652_479143_+\|tripartite-tricarboxylate-transporter-permease	gnl\|CDD\|225870	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP011361.2\|WP_008590425.1\|477177_477636_+\|tripartite-tricarboxylate-transporter-TctB-family-protein	gnl\|CDD\|377815	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family. This family consists of several hypothetical bacterial proteins of around 150 residues in length. This family was formerly known as DUF1468.	1.63231e-14
NZ_CP011361.2\|WP_008590436.1\|467911_469048_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	4.12976e-45
NZ_CP011361.2\|WP_008590427.1\|476093_477110_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|225722	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown].	1.07515e-82
NZ_CP011361.2\|WP_008590442.1\|465952_466843_-\|NERD-domain-containing-protein	gnl\|CDD\|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	4.45844e-18
NZ_CP011361.2\|WP_008590419.1\|481208_482306_+\|glycosyltransferase	gnl\|CDD\|340828	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.	6.42733e-72
NZ_CP011361.2\|WP_008590444.1\|465479_465902_+\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	3.3543e-94
NZ_CP011361.2\|WP_008590447.1\|464964_465207_+\|DNA-directed-RNA-polymerase-subunit-beta	gnl\|CDD\|378713	pfam11772, EpuA, DNA-directed RNA polymerase subunit beta. This short 60-residue long bacterial family is the beta subunit of the DNA-directed RNA polymerase, likely to be EC:2.7.7.6. It is membrane-bound and is referred to by the name EpuA.	1.87205e-20
NZ_CP011361.2\|WP_008590435.1\|469048_472114_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP011361.2\|WP_040609437.1\|464124_464946_+\|flagellar-hook-basal-body-protein	gnl\|CDD\|227125	COG4786, FlgG, Flagellar basal body rod protein [Cell motility and secretion].	8.58677e-61
NZ_CP011361.2\|WP_008590420.1\|479792_481190_+\|O-antigen-ligase-family-protein	gnl\|CDD\|372600	pfam13425, O-antigen_lig, O-antigen ligase like membrane protein.	1.13647e-67
NZ_CP011361.2\|WP_008590430.1\|473700_475284_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	1.5474e-179
NZ_CP011361.2\|WP_008590413.1\|482776_483256_+\|exopolysaccharide-biosynthesis-protein	gnl\|CDD\|227350	COG5017, COG5017, Uncharacterized conserved protein [Function unknown].	2.7754e-27
NZ_CP011361.2\|WP_008590411.1\|483293_484178_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	5.06468e-169

>NZ_CP011361.2|WP_008590432.1|472331_472667_+|helix-turn-helix-domain-containing-protein
MIGDRIQHIRKNRGYSLSELAERANVAKSYLSSIERNIQKNPSVLFLEKISKELDVSMNYLLHGEQQDVNEPLDDEWVNLVKDAMSSGLSKEQFKDYLEFNKWKLNKSDKE
>NZ_CP011361.2|WP_008590435.1|469048_472114_+|efflux-RND-transporter-permease-subunit
MKLVRTSIKRPVGVIMIVAAILALGFVSLRNLTIDLYPDIDLPVAVVSTSYEEAAPQDVEQLVSRPIEGAVSSLEGLEVLQSQSQQGASLIFMQFSTGVDLDSALLEVREAVSRVSGVLPENAGEPSVLRFDPQALPIMTIGLSGDTPAELQQIAEDQIVPYLERQGGVASISVEGGRTEEVQIEIEREKLARLGIDSQTIIQTLNASNQAATAGSVDKGDKNLRIRVNGEFDSIDDVKNTVLTTESGDRLKLDQIAMVEKRIEDTGTVSEVNGETAVVLSALKKTDANTVETAENIQTAMDEVAPELPENVEMKTVLDTSEFIKVSINSVIVNIIIGGLFAVAVLLLFLKSIRATLVIGISIPIAIISTFTLMYFTGETLNVLTMGGLALGIGMMVDSSIVILENIVSYRQRGFSMKEAAEKGASELAPAVIASATTTLVVFLPIMLVDGIASELFTPLALTISFALLASLAVSVTLIPMLSSKLLTKAMRDGKRNWFDRLLGKMNRGYQRVLRKVLKFRKTTVLLTILSIGGSIALIPLVGTSFIPESDQGQIEVDVSLERGTSLEETETVTSEISKRLNEFSDVVDVHYLSIGSGEMGLAGGSADRASYTVQLVDPGDRERSTQEVMEDMENDLSDVVGAEVEVTEMSAGLGTGAPLEVQINGQDNAVLNELAEQIVLIMKDVEGVVAPSSSTEDSEPQLDIQVDRNKASGYGLTEQQVISQVQLAFQGQTATRYREGGEELEVRLVTPLDESAGIAELEGTPISTASGDTVPLSSIAEIEQVQGPVALNRENQQPQVNVTADIGERDLGSVTADVEEEIDQLNFPEGYTYEVGGQAQDMEEAFGDLSVALLFSLFLVYAVMAVQFENFLFPFIIMFSLPATVVGVAVGLFVTGLPLSMPAFVGIIMLAGIVVNNAIVLVDYINILRRRSYSRYDAILEAGPNRLRPILMTTVTTVLGMVPLALGIGQGAEAQQPLAVTIIFGLTVSSFFTLVLIPVVYTYFDDLSVKINKFFQKRVE
>NZ_CP011361.2|WP_008590436.1|467911_469048_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MKRGILLSLLLILLAACSSDETEEEKTRVTPVETEEIREGTFTVEREIIARAEPSATSPVVPGAPGEITFISVEEGDSVERGDALAEITPGQGESQVELQENALAQARQQLDQAIASRDDAEEAVERARSQEAPEGLSGLLGPSEQELEGQVAQAEQQLSQARSAVESARLQVEQAEIQLEQAREQSGPETLTSPRSGVVTSIQGNVGDMATNQQPFATVVSLNPALITASITAEQTSLFEEGAKYQVDVEASDEPVEAQLTNVATVPGDTGLYSVEAEISNPDGSIKPGTTAVFQLPETVVENTTIIPTEALVETSDETFVYKVEEKKAVKVPVSVESSQTEESAVTGDVSDGDRVVTSGQITLTDGAEIRIIGEDE
>NZ_CP011361.2|WP_040609424.1|467203_467821_+|hypothetical-protein
MKYRASQELTSMIIGDYEELINAIPEEKVAVYLYTNRMYHSTYVPEDGLYQFVFRHFYRLENPSLTQDFKDRFFDLMEGVRGETRPNVYHITKSLYEVANHKGAYTLQFPLATAMLHAINPAFPHYDTQVFKAFDFSSAYHLSGFYKKMKRYIDQYRHMYETYQKLIDLEEMQPVFDHFDERFGGYQLPVEKKIDLIVSQLGSTL
>NZ_CP011361.2|WP_008590442.1|465952_466843_-|NERD-domain-containing-protein
MIRKKRDKPVQLKILHALEKRKTLTEQELLQKSRLEKGWEGEQLFDRMTGTVSKETLQLHDLRLTCRGSTFQLDTLLIRPDAIYLYEVKYYNGEFVYEDGDFKLSGGKVILNPLHQLLRARTLLHQLLEEHGYSFPVRAYVVFPHPHFFLYHAPVTDSFLFLPQWKSHITRHAAAGVLTATHHKLADLLCSLHRKEPSATQDVLYGELHKNLFCPGCAGPVCRQFKTFFCPDCDNHYPAGRLIYEALKEFRLLFPEMRLTLSSARNWCRVASDKQIRRALARHFNEKGQGRGVHYV
>NZ_CP011361.2|WP_008590444.1|465479_465902_+|3-hydroxyacyl-ACP-dehydratase-FabZ
MLDINEIKEIIPHRYPFLLIDEVEELEEGERAVAYKNVSVNEPYFQGHFPDYPVMPGVLITEALAQTGAVAMLKKEENQGKLAFFTGIDKCRFKRQVKPGDRLKLEVEIVRLKGPMGKGKAVASVDGEVACEAEIMFALK
>NZ_CP011361.2|WP_143023826.1|465221_465368_-|lmo0937-family-membrane-protein
MLWTIIVILLILWLVGFVIDLGAIIHLLVIAAIVLIVIRLIQMVTGKK
>NZ_CP011361.2|WP_008590447.1|464964_465207_+|DNA-directed-RNA-polymerase-subunit-beta
MVENTRKNYRKNKTNEAKTRNKRRRALPIWLRLIIVVLLCLLALVVGLMIGYGVIGGGNPLEVFDWSLWQQIIDIMTGAE
>NZ_CP011361.2|WP_040609437.1|464124_464946_+|flagellar-hook-basal-body-protein
MMQSAVTMGQVQRKLDIIGQNISNANTAGYKSRQADFTSLLTQNIDNLKDKEAAVGRRTPDGIRLGSGARLGHTNLDLKQGTVRTTDRELDLALLKERHLFRVQVPTEAGNETQYTRAGNFYFLPVENDQLMLTTGEGHPVLGEDGEEIRLDNGFDDFTIRGDGSISVKRGDREETEASIGIAEAIRPRMLETTEGNRFRLPDTEALGFNEEEILAAVQNEDRSVRSNSLEASNVDTGQQMTGMLQMQRAYQFNARALSTSDEMMGLVNQLRS
>NZ_CP011361.2|WP_008590452.1|463238_464060_+|flagellar-hook-basal-body-protein
MLRGFYNSASAMVANQRYQETLTNNISNANTPGYKQDQGVKRAFPEMLIKESGRLQLPVKSGLSLPQDRGIGSMHTGMYLQETVPSFTQGRLRETGTATDVALLQKGAPDETGFTFFNVRNEDGETRYTRNGNFTVDGEGFLTTNKGNYVLNAEGNPVQTGGMEFTVRNDGTVEIDGEEEPLGITYTPDASQFIKEGGDLFRAGEDAVTEEARGKEDMEFEVRQGMLERSNVDAQATMTEMMSNYRSFELNQRVLRAYDQNLQSAVTEIGRVQ
>NZ_CP011361.2|WP_008590430.1|473700_475284_+|sensor-histidine-kinase
MNVKLQTKILGLVLSLLLLVTVTFTGAYAFMEKEEVEQDVGQLALQVASTISFMPTVKEAFASENPSEIIQPIAKSVQGETGAEFVVVGNKDGIRYAHPDEWKIGKKMVGGDNSRALKDGEYYTSRAEGTLGPSLRGKAPIISDSGEIIGLVSVGFLIEDIRTMVWNEMETIILIATGVLLLGVIGSLLLARSIRKDTLGLEPYEVTSFYQTREAILSSVKEGIIAIDSQGRVTMINQSALELLGLENADAGANIIDIFPNTGMLRTLQSGKAEQDEEIVLNNKVVIVNRTPIREKGETVGVVSSLRDKTEVREMVNTLSEVKRYSESLRAQTHEYTNRMYVLLGLMQLGNTKEATEMIEQEFTESEPQQKIIFQRIHDDTTQAILTGKISKASEKKVRFKIDEDSSLERLPEHINKVELITILGNIVDNAFEAVQNQKEKLVEVFITDIGNDIIFSVTDNGPGIPEDMYESIFQKGSSTKDGVMRGYGLWNVQQIIDKLGGTIEILDNTGGGTVFSVFLPKERDRR
>NZ_CP011361.2|WP_008590429.1|475280_475946_+|response-regulator
MKVMISEDDFRVANLHEQFLNTIEDIEVVGKAANAEETIALVEEKQPDLLLLDVYMPDELGSHLLPRIRDKSPQTDIIMITAAKDKETVEHSLNYGVVDYIIKPITIERFQKTIEEYKKRAHILNKTEEFSQETLDFLLNQKEENKEEEVPKGIDPLTLKKVEQFLTSEEAGVTAEQVSERMGASKTTARRYLEYLVSINTAVAEMKYGRVGRPERKYYPY
>NZ_CP011361.2|WP_008590427.1|476093_477110_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKIFVFISIMFIFVLAACGSSGSEESSGGGEGEGSEDWKPEKNVEIVAPAGAGGGWDTTARSVGKILEEEDIMDKSVGVVNKEGGGGAVGWSYINSTNNPHNIFVSSPPLVFIPLNGQSELSYEDFTPLANMIADYGAFAVDADAKWNDLNELFEDMKKDPSSVTVVGTSSPGSMDHMQFVSIAKKAGVDIKKIKYVSAQDAGGMTQIMNGSADVYSTGVAETVEQVKAGEVKVLGITAEERLDGEVLSEFPTAKEQGIDATFVNWRGFFGPGDMTEAQVSFYEEKLKEVSESEAFADIRDNYGWNEMYMNSDEYKEFLQKQTEELGALLDELDMKK
>NZ_CP011361.2|WP_008590425.1|477177_477636_+|tripartite-tricarboxylate-transporter-TctB-family-protein
MLKTMNQKVSIFLIVLAVGYLYAAYNLKKYPYVPVDADAVPKVLGYLLIGLAVILFFDKSSETEEDKEKRNVPKKEIPIMLGVGVLIFLYIFLLEILGFIVTSALFIFGCSLFLGYRKHITNVLVSIIVPGVLYVTFTYLLNIILPQGILPF
>NZ_CP011361.2|WP_008590422.1|477652_479143_+|tripartite-tricarboxylate-transporter-permease
MGAMEGIAQGFQVAFSLQGILFVLIGVIAGTLIGMMPGLGPISAIAIMIPVTYGMEASVALIMMAGVYYGAVFGGSTSSILLNAPGISGTVASSFDGYPMAQRGEAGKALAIAAISSFVGGTVSVVLLMLFAPMLSQVAVSFGPAQYFALMFLGLTAISSLSDGSTTKALITATIGFMTATIGLDGQTGTSRFTFNNPNLMEGIDFLVIALGLFAIAEVCFLIIKRKDTSLSDQGDIGSLRLSKEDFKEMRGPMTRQSFLGFLLGVLPGAGATIASFIGYISEKRIAKNPEKFGKGSIKGLAAPETANNAATSGAFVPLLSLGIPGSGTTAVMLGALLVLGIQPGPLLVQESPDVFWGIIASMYIGNIFLLILNLPLIPYIAKILKISRPLLISLVIIFSLIGVYSISFNTFDLYVLLFFGVVGYFMRILNFPAAPFILAFILGGMMEQSLRQALTASGGNVMALISDPVSISLYVVSALSFIVPLIRTRKNKSAA
>NZ_CP011361.2|WP_008590420.1|479792_481190_+|O-antigen-ligase-family-protein
MQAISDNNKLKKGLEVYFLLYILLQPFLDITAFVNLPVSEPVRVLSMMAGVFYVVFLTAPSKGKKIALLYIGAAAAFFALNLINNYIFKDPFSLVAEITYLTKTAYVVMMIVIYYFVIEALYSRIKWKALIRQLVFWAISVVSIVMVVASITDTGKRSYGYLAKEGHSGWFFSGNEISIIIGMGFGFMLLAYMVRDGEKESLWKLPLVGLTIYAALTVGTKVALGSILALLAVGILAALIQWWKKKGWHNVVVLPVLLLLTVMAIPYTAIGNNLDLTISQIEEEQEAQQDNDPANSPGGGSAEEGGETADNSTGGTSQSVEQLLSSRGDFFDAQLVDYKEAVITQKLLGMGYGGNYEGDPKLVEMDFFDWFFNFGIIGFILLSAPIWFLLGRTVVLIVKAKGKVFTPYFLLTGTAVGLGLGAAFTAGHVLSSPASGFYLALAVVYLNFETYQLYRQNSRESYHFR
>NZ_CP011361.2|WP_008590419.1|481208_482306_+|glycosyltransferase
MKRILVISNMYPGKRSRTFGIFVKNHVEMLRSRGFEIDVLGIRDPRMGKKFVIQKYVKWLGKFAWQLLKNRKKYDVIHAHYVFPSGLLARIFKKISGAPMIVTAHGGDIDRMARKNNLIAGETKRILRDADAIIAAGEGLRQDMISDFGGDPEKISVLSMGVDRNKFYPRDKSVSKKMLGLDVNCFHILYVGNIIKAKGIEELVNGFREVEKQNSSVHLHLVGEVKEPDFYNEVRAAIPESPESRIHFHPSVNQDKLAEWMSAADLFVLPSHMEGLGLVAIEAMACNTPVLGTRVGGLQYVLADGRGELVEPQNERALAESMNKLINDPELRKTYTEQGETMAQKHDLETVVRKLGQMYEEMGEK
>NZ_CP011361.2|WP_008590416.1|482306_482780_+|polysaccharide-biosynthesis-protein
MGKDKKLLLISSIGGHLTQLLQLEPLFSQYDYHIVTEKSAITKQMKKKHPVSFLVYGGRNYPVRYIFKFSFNIMKSFFLFLRERPDVVITTGAHTAVPMCYIAKLFRKKVIYIESFAKTTSPNLSGRLVYPIADLFVVQWESMKKVYPKAVNGGSIY
>NZ_CP011361.2|WP_008590413.1|482776_483256_+|exopolysaccharide-biosynthesis-protein
MIFVILGTHELPFPRLLKEVERLKIDGVIDEEIIVQNGHTSYSSEYMTFSPFVSYEEMDKLFDQADLIITHAGTGSVTTALKKGKKVIAVARLAEFGEHNDDHQLELVNVFEEQGHILSWAPGKDLAEVIAQARNFEPEAFVSGKAGMINLLETYIENL
>NZ_CP011361.2|WP_008590411.1|483293_484178_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKVKKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIVEEAVDSGIEDIIIVSGRGKRAIEDHFDKSYELEEKLEEKEKYDLLKEVEDISNLANIHYIRQKEQKGLGHAIATASRFIGNEPFAVLLGDDIVQANGTPCLRQLMDVYEKEEASVVGVQDVPENQVSSYGIIKTKNNEELSDGYVEVEDLVEKPALEDAPSNLAIMGRYILTPEVFDILETLPPGAGNEIQLTDAIKKLTNTQKVLAYNFVGERFDIGNKLGFIDAQIDFALNRSDLKEDILQLLEDKLEKYK

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Crispr_ID: NZ_CP011361_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011361_2

632136-632230

Orphan

Consensus_repeat	Method
GTATTCGATGAACATCCGGGCAAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011361_2

>merge|NZ_CP011361|2|632136-632230|CRISPRCasFinder
GTATTCGATGAACATCCGGGCAAAGGAAATGGAAAAGGAAAAGATAAAGATAAAGATAAAGAACACCCGGTATTTGATGAACATCCGGGCAAAGG

>NZ_CP011361|2|2|632136-632230|CRISPRCasFinder
GTATTCGATGAACATCCGGGCAAAGG	AAATGGAAAAGGAAAAGATAAAGATAAAGATAAAGAACACCCG
GTATTTGATGAACATCCGGGCAAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011361.2\|WP_008586949.1\|623563_625018_+\|sodium/panthothenate-symporter	unknown	unknown	gnl\|CDD\|236519
NZ_CP011361.2\|WP_008586958.1\|633962_634148_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011361.2\|WP_008586968.1\|637379_637880_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP011361.2\|WP_008586946.1\|623294_623567_+\|YhdT-family-protein	unknown	unknown	gnl\|CDD\|377626
NZ_CP011361.2\|WP_008586960.1\|634164_634470_+\|DUF4212-domain-containing-protein	unknown	unknown	gnl\|CDD\|226777
NZ_CP011361.2\|WP_008586972.1\|638819_639878_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236013
NZ_CP011361.2\|WP_008586974.1\|639877_641176_-\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
NZ_CP011361.2\|WP_156330832.1\|625224_625395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011361.2\|WP_008586939.1\|620308_621697_+\|sucrose-6-phosphate-hydrolase	unknown	unknown	gnl\|CDD\|273554
NZ_CP011361.2\|WP_008586941.1\|621693_622569_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|366120
NZ_CP011361.2\|WP_008586963.1\|636273_636438_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011361.2\|WP_040608979.1\|625921_627301_+\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP011361.2\|WP_008586955.1\|628222_628894_+\|M15-family-metallopeptidase	unknown	unknown	gnl\|CDD\|350620
NZ_CP011361.2\|WP_008586943.1\|622619_623129_+\|macro-domain-containing-protein	unknown	unknown	gnl\|CDD\|394878
NZ_CP011361.2\|WP_008586953.1\|627392_628097_-\|DsbA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|239322
NZ_CP011361.2\|WP_008586961.1\|634482_636144_+\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|274698
NZ_CP011361.2\|WP_008586964.1\|636454_636733_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011361.2\|WP_008586970.1\|637903_638827_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920
NZ_CP011361.2\|WP_008586966.1\|636771_637221_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP011361.2\|WP_008586937.1\|618845_620243_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|131051

Protein	Function_ID	Function_description	E-value
NZ_CP011361.2\|WP_008586949.1\|623563_625018_+\|sodium/panthothenate-symporter	gnl\|CDD\|236519	PRK09442, panF, sodium/pantothenate symporter.	0
NZ_CP011361.2\|WP_008586968.1\|637379_637880_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	6.76659e-16
NZ_CP011361.2\|WP_008586946.1\|623294_623567_+\|YhdT-family-protein	gnl\|CDD\|377626	pfam06196, DUF997, Protein of unknown function (DUF997). Family of predicted bacterial membrane protein with unknown function.	5.00457e-28
NZ_CP011361.2\|WP_008586960.1\|634164_634470_+\|DUF4212-domain-containing-protein	gnl\|CDD\|226777	COG4327, COG4327, Predicted membrane protein [Function unknown].	1.11161e-32
NZ_CP011361.2\|WP_008586972.1\|638819_639878_-\|threonine-synthase	gnl\|CDD\|236013	PRK07409, PRK07409, threonine synthase; Validated.	0
NZ_CP011361.2\|WP_008586939.1\|620308_621697_+\|sucrose-6-phosphate-hydrolase	gnl\|CDD\|273554	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	3.97012e-175
NZ_CP011361.2\|WP_008586941.1\|621693_622569_+\|ROK-family-protein	gnl\|CDD\|366120	pfam00480, ROK, ROK family.	3.40496e-71
NZ_CP011361.2\|WP_008586974.1\|639877_641176_-\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0
NZ_CP011361.2\|WP_040608979.1\|625921_627301_+\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	1.0186e-162
NZ_CP011361.2\|WP_008586955.1\|628222_628894_+\|M15-family-metallopeptidase	gnl\|CDD\|350620	cd14845, L-Ala-D-Glu_peptidase_like, L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase. This L-Ala-D-Glu peptidase family includes L-alanyl-D-glutamate peptidase (bacteriophage T5) (also known as L-alanoyl-D-glutamate endopeptidase), and Ply118 and Ply500 L-Ala-D-Glu peptidase. Bacteriophage endolysin degrades the peptidoglycan of the bacterial host from within, leading to cell lysis and release of progeny virions. The bacteriophage endolysin Ply118 cleaves between L-Ala and D-Glu residues of Listeria cell wall peptidoglycan. This family belongs to the MEROPS peptidase M15 subfamily C.	3.44201e-45
NZ_CP011361.2\|WP_008586943.1\|622619_623129_+\|macro-domain-containing-protein	gnl\|CDD\|394878	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family. Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. This family includes eukaryotic macrodomain proteins such as human MacroD1 and MacroD2, and bacterial proteins such as Escherichia coli YmdB; these have been shown to be O-acetyl-ADP-ribose (OAADPr) deacetylases that efficiently catalyze the hydrolysis of OAADPr to produce ADP-ribose and free acetate. OAADPr is a sirtuin reaction product generated from the NAD+-dependent protein deacetylation reactions and has been implicated as a signaling molecule. By acting on mono-ADP-ribosylated substrates, OAADPr deacteylases may reverse cellular ADP-ribosylation.	7.83231e-60
NZ_CP011361.2\|WP_008586953.1\|627392_628097_-\|DsbA-family-oxidoreductase	gnl\|CDD\|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	1.43171e-92
NZ_CP011361.2\|WP_008586961.1\|634482_636144_+\|cation-acetate-symporter	gnl\|CDD\|274698	TIGR03648, Na_symport_lg, probable sodium:solute symporter, VC_2705 subfamily. This family belongs to a larger family of transporters of the sodium:solute symporter superfamily, TC 2.A.21. Members of this strictly bacterial protein subfamily are found almost invariably immediately downstream from a member of family TIGR03647. Occasionally, the two genes are fused.	0
NZ_CP011361.2\|WP_008586970.1\|637903_638827_-\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	5.78626e-102
NZ_CP011361.2\|WP_008586966.1\|636771_637221_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	9.17216e-08
NZ_CP011361.2\|WP_008586937.1\|618845_620243_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0

>NZ_CP011361.2|WP_008586955.1|628222_628894_+|M15-family-metallopeptidase
MIVSKNELVRRSVRNMGNVDHRIAVFGKKIIAAAYDEGICAQITEGHRSYRRQAELYGQGRSWYRWDGRNYGSRGSIVTHARPGQSIHNYGLAIDFCLVDKSGQQAIWRVDESWRRVASISKDLGFTWGGNWRTFKDYPHLEWTHGMTWKDLASGRGPFDYPGFLIRRGSRGRRVKQVQLELGTAADGIFGPLTEKAAVTFQQKNNIQVDGIIGPQTWNKFYN
>NZ_CP011361.2|WP_008586953.1|627392_628097_-|DsbA-family-oxidoreductase
MKIEIWSDFVCPFCYIGKRRLEEALESLPDDAEVDIQYKSFELDPDAKTETTPVMHEKLAKKYNQSLEQTKEMTSSMEEQAKAVGLDFRFDQMIPANTFEAHRIAKFAEEQGKSHAVTERFLSAALTEGKNIGDSETVYNLAVEAGLPAGEVEQILNGDDYEESVREEEREAYQLGVQGVPFFVINRKYAVSGAQPKETFEDALKQVWEEERGTPAFTSLNSKQGSTCSEDGCD
>NZ_CP011361.2|WP_040608979.1|625921_627301_+|group-II-intron-reverse-transcriptase/maturase
MQESQPTPDGGYLQENRMESEGNVEVCSSSRGETGGKDGTHHFINKVVHRTNLNRAYEKVKANKGVAGVDDMSVQELYGYLVLNKDTLISDIKNGSYEPQPVKRVEIDKEDGSKRKLGIPTVKDRLVQQAILQVLEKTIDPTFSDDSYGFRPNRSAHDAMRRAKEFYEDGYHTVVDIDMEQYFDTVNHDKLMYHVGEHVKDPTVLRLIRKFLRSGVSIDGTIYATEVGCPQGGNLSPLLSNIYLDQLDKELERRNHRFIRYADDCNIYVTSRKAGHRVMNSVTTFLEKDLKLTVNRQKSEVGSPTKRKFLGFCLHTTKDGVGFRPHITSKKKFEKKLREKTSRKRSGSTYQIIKEVNEITTGWIAYYSISYMKKYIQRIDQWLRRRLRQIIWKRWKKVKTRYQNLVKLNIPRQKAWEWANTRKGYWHIACSYILHRAIRNDRLEKTGLKNLNQLFKKAH
>NZ_CP011361.2|WP_156330832.1|625224_625395_+|hypothetical-protein
MHIEQEQWYTLTRSCHHCNTEELEDYMFFVKDGVRDGTILCQDCYYFYLEISGKNE
>NZ_CP011361.2|WP_008586949.1|623563_625018_+|sodium/panthothenate-symporter
MNWAVIIPLLLFIILIFIIGFWANRSIRLSKKDFMQEYFLGGRELGGFILAMTMMATYGSASSFIGGPGVAYTEGLAWVLLAMTQVVTGYFVLMVLGKKFAIKAREYKAVTLTDYLRTRYQSHVVALLAAVSIIIFLFSAMAAQWVGGARLIETVTGIPYTSALFIFAASVLIYVIIGGFRAVALTDAVQGSVMFVGTLILLIATVIAGGGVEEIMQGLTRENPNLITPFGADLTLTPAYVSSFWILVGVAVVGLPQVTLRAMSYKSSKAMHRAIIIGTVVVGFVMLNMHLIGVFARPILPSIEVGDKVMPLIALEVLPGWVAGLVLAAPMAAIMSTVDSLLLLVSSAFVKDIYVTYLKPDASERRVKGMSFGVTGVLGIFVFLMALQPPDLLIWLNLFAFGGLEATFIWPVVLGLYWQKGNKYGAISSMLTGILSYVIVDQFFNQPLGVHSVVLPVLFSFIVYVLVSAGTTQNYTAPVTNPTR
>NZ_CP011361.2|WP_008586946.1|623294_623567_+|YhdT-family-protein
MEKHDERFKVANREALIGVGLALINFLWWFGFAYGLGSKPPEEYSYIFGLPAWFFMSCVGGFILMSVLVIFVVNVYFTDVPLEAKDEDIE
>NZ_CP011361.2|WP_008586943.1|622619_623129_+|macro-domain-containing-protein
MKIEVVKGDIADQSDMEAVVNAANKELRSGGGVAGALHKKAGPGLQKAGERYAPLQPGEAVVTEGFGLPNDFVIHTLGPVYGTDEPAEELLGSCYGESLERAREHNITSVAFPLISTGAFGYPLEAGIDTALEVVESYFPRPGSLQIVRSVLFSDEQYETFKRKYESRS
>NZ_CP011361.2|WP_008586941.1|621693_622569_+|ROK-family-protein
MNLGAIEAGGTKFVLAVGNEEGEILEKKVIPTEHPSITMPAVIDFFRGKDIERLGVGSFGPIDVNADSAFYGQLQKTPKTEWVDYPLGKELQDHLLIPVIIDTDVNVAAMSEAKWGDAKDVDSCLYITVGTGIGAGAYIKGETLRGLSHPEMGHIPVRRHSDDDYAGGCPYHGDCLEGMAAGPHIEKRWGRPAEELVDRKEVWEMEAYYLAQALVNYIYIVSPERIILGGGVMKQKQLFPMIRTMVLELLNGYVSSPYLTEDTIDKYIVSPGLTDEAGVKGALYLAMGSRM
>NZ_CP011361.2|WP_008586939.1|620308_621697_+|sucrose-6-phosphate-hydrolase
MTETVMKNEAKEKIARWGNTVKQDPYYPAYHIAPPVGLLNDPNGFIHWNGTYHLFYQWMPFHTGHGAKFWAHVTSGNLVDWKFHGPALAPDRWYDRSGCYSGSAVEKDGELILFYTGNVKNGEGERESYQCKVRSPDGVTFEKLGVSIELPKGFTPHFRDPKVWKTGHSWYMVIGAQTEDKEGCVVLYDSPDLESWQYKGILASGLGYMWECPDFFRLEGDVLLFSPQGLEEQGMDYRNMYQSGYIIGDFEDGFRTEDFRELDHGFEFYAPQTMEDDAGRRIIIGWMGMPDGGEEYFPTHDYHWIHQMTLPRELSQKGDTIVQKPLVEMEELRMRKVVEESQEKWEGKIPASSEILLQDIDGDVDIELFRYISLRCSKGKAILTRPAMDGSGEEWRATVLDSPLTEMRLFVDHSSIEIFINGGETVFSSRIFPEKEETSGIINGDLSLTVWELRRQTGGKTV
>NZ_CP011361.2|WP_008586937.1|618845_620243_+|PTS-transporter-subunit-EIIC
MSSNEEIAKQVVKAVGGEENIQSIAHCATRLRVMVHDHEKVDVDGVEDIDKVKGAFYNSGQYQIIFGTGTVNRIYEEVTNQGVTGTTKSEMKEESKQQGNRFQRAIRTFGDVFVPIIPVLVATGLFMGVRGLVTQEQILTLFGMAPENISENFILFTQVLTDTAFVFLPALVAWSTFRVFGGTPVLGLVLGLMLVSPSLPNAWEVAGGTAEPLQFLGFIPVIGYQGSVLPAFFAGIVGAKVEKFFRKRVPEALDLIVTPFLVLLIMITLSLFALGPILHIVEGWIFDGTRTLLELPFGLSGLIIGFFNQIIVITGVHHIFNFLEIQLLENLGYNPFNPIVTAAMAAQGGAALAVGVKTKKAKMKALAYPSTLSAFLGITEPAIFGVNLRYGKPFIMGLIGGGAGGFLASILGLKATGMAITVIPGALLYLNEQIIWYIVVNLVGITVAFVLTYLFGFDEKMEENM
>NZ_CP011361.2|WP_008586958.1|633962_634148_+|hypothetical-protein
MVLVAGFVLLTIVSVVLGLKKGKALYLTFPFVALAGFVLIKIAMVPLPFWETVSFIFDLRD
>NZ_CP011361.2|WP_008586960.1|634164_634470_+|DUF4212-domain-containing-protein
MKKIDKKTADAYFRTRTTLIVIYLIIGFCVSYGVVLFAEPLSSITFLNMPLHYYMGAQGAVLTFIFLLFVNAIVSDFVDRKFGLLDLDKEEENESGKAVNK
>NZ_CP011361.2|WP_008586961.1|634482_636144_+|cation-acetate-symporter
METQFLVSLTLILATFALYIGIAVFNTAKKTSDFYVADRGVPPVFNGMAIGADWMSAASFIGMAGTVMLLGYDGLAYIMGWTGGYLLLTFLLAPQLRKYGRYTVPEFIGDRYKNDTARLIAAAATIIISFTYSVGQLAGSGVVIGRLLEVNTAVGTLVGVVLIAFYSALGGMKGITWTQVAQYVVLIAAYVIPVVFMALQLTNNPLPWISYGEVVSEFTTLDQELGITEYLVPFTEGTKWQFIALMFTLMAGTAGLPHVITRFFTVATMKAARWSGAWALVFIGLLYLSAPAYAAFSRFILMTQVAGSQIDNLPAWTQSWVDTGQLSVADTSGDGTLQWSELVISGDIVVMATPEIANLGIFVIGLMAAGAMAAALSTAGGLMITISAALSHDIYYRSINPKATDRKRLAVGRWSIVIATVVAGLIALNPPGAITQIVAWAFALASGTFFPALVLGVWWRRANGPGVVAGLLVGLTVTLTYIFLAKFGGITLLGIIDTGAGIFGAAAGFLTNVIVSLSTKPPTQQTAEEVTDLRYPEQLIYENGEVWVKEKAE
>NZ_CP011361.2|WP_008586963.1|636273_636438_-|hypothetical-protein
MYYLGFALFFLIYFLVGLFTDLLKLTTVGGIIAIAFILLNVYLYVKEKKKDPEE
>NZ_CP011361.2|WP_008586964.1|636454_636733_-|hypothetical-protein
MQSKRDLISLTNLWFDGTHTEFTHAFIERFAYEWVIEIVNPQPIPLIEDKDYLMTLSFEQEDGLTFSSINIEAYDIMQGEEFTVYRFYMYPL
>NZ_CP011361.2|WP_008586966.1|636771_637221_-|sigma-70-family-RNA-polymerase-sigma-factor
MNIQPFTDYYPMIMDVLRLLRIPPPYEDERQEAYFVYHRCAGNFNPSRAKFSTYYYQELKFHYQSALRKSKRRKEILTMTSPRLPSVHIDHYFIYPGFNVREEKIFTCYMEGYTTEDIASLLALSKSTVLRERKKLRQKLSSYVSFSPD
>NZ_CP011361.2|WP_008586968.1|637379_637880_+|sigma-70-family-RNA-polymerase-sigma-factor
MSPESFEKIVQTHEKRIHYFIHHLGIRDDEGDFYQEGLIALWNACTTYVAGRSDFSTYVNWKIKNALIDQIRQRQRHAEKEEHYRHMTGRPETEYVPREMFDEELWKGIRGMLTENEWKWVTQFIIEDKAVAQIAVKENVSRDAVKNWGRHARRKLKHFPLLMDEK
>NZ_CP011361.2|WP_008586970.1|637903_638827_-|homoserine-kinase
MNNFTITVPATSANLGPGFDSVGIALTKYASFHCEPSDAWHFIVPEADRPFIPAGTDNLVYQAASFTAREYGQKELIPCVVTSSNEVPVSRGLGSSSTAVVAGIELANQLLGLDLSEQEKVVVACKIEGHPDNVAPAICGGIVIAHYDYDVPKYVKLTNGVQSLQWLTIVPDFHLKTEEARDLLPKHFSYKEAVYASSTGNVLVAALAQHDWKLAGEMMEKDRFHQVYRSPLLPDFAPVSKALKTAGSAGTYVSGAGPTMIGLFEELEEKEVEELRSVFPHLHFESLRTDTEGVRVEVHAHQEVSEA
>NZ_CP011361.2|WP_008586972.1|638819_639878_-|threonine-synthase
MWHGLLHHYRDSLPVTDATPALTLNEGDTPFIRLENLSRDLDIDAYVKVEGANPTGSFKDRGMVMAMAKAIEDGSEAVICASTGNTSASAAAFAARANLRCIVVIPDGKIAEGKLAQAVMYGAEVFSIRGNFDQALEIVKEVAKEDGITLVNSLNPNRIEGQKTAAFEVCDALGKAPDYLSIPVGNAGNITAYWRGFKQYNEKHATGLPKMYGFEASGAAAITDDRIYEQPETVATAIRIGNPASWGPANTVVEESDGEIDKVTDEEILQAYHMLAQKEGIFAEPASCASLAGTIKKLEQGRINKGSTVVHVLTGNGLKDPNTAIDTSELKPKVIENDLQAFREALKGGHHE
>NZ_CP011361.2|WP_008586974.1|639877_641176_-|homoserine-dehydrogenase
MKDTIRVGLLGLGTVGTGVIEILHTNKESIKHKTGCEVKVTRALVHDIHKTRDLPGEAVQLTTNYEDITKDPEIDVVVEVMGGVEHTLNVLLEAIENKKHIVSANKDLVAEHGEILFDAAVRNETDLYYEASVAGGIPIIRSIVDGLSSDNIRKMMGIVNGTTNYILTKMSQDGSDFDDVLKEAQELGFAEADPTADVDGLDAARKMTILSILGFSMPTRLSDVKLKGIRGMSTSDIAYADKLGYTIKLIGIAEHDEKGITLSVEPSLLPKAHPLSSVNDEYNAVYVYGDAVGETMFYGPGAGKGPTATAIVSDLIAVVKNIRLGTNGNNYVHPQHDRLLKPKAKTYSKKYIRLHVLDQPGILLEITRIFADKDISFDQIIQQPSDSREERELMMITHSVNEEAFEKAMEALEQAASVRSVDSVFRVEGGDD

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Crispr_ID: NZ_CP011361_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011361_3

1674004-1674634

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	CRISPRCasFinder
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	CRT
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	PILER-CR
AATTTCAATCCACGCACCCGCGTGGGGTGCGAC	PILER-CR

9 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP011361_3

>merge|NZ_CP011361|3|1674004-1674634|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTCCCAACTTAAGCACCCGCGTGGGGTGCGACCAGGTCGCAGGGAACGCTTAGAAGCTATTGAACTATTTCAATCCACGCACCCGCGTGGGGTGCGACGAAAAACGCCAGTAACGGTAATGAAGAAACACAAATTTCAATCCACGCACCCGCGTGGGGTGCGACAGCTTTTGCAGATATTCTCTATCCAGCTGCAAGATTTCAATCCACGCACCCGCGTGGGGTGCGACCTACCTCGGATGTGGCGGCTTGTTCCAGGTACGTCTGATTTCAATCCACGCACCCGCGTGGGGTGCGACACAGCAATTCATCCAATACGTGCAGACAAATGGCCCATTTCAATCCACGCACCCGCGTGGGGTGCGACGCAGGTGCAGAAAGAAAAAGCAGAGCTCCAAGAATTTCAATCCACGCACCCGCGTGGGGTGCGACAGTAACCACACAAAAAAGTGAATAAACACGTAATGATTTCAATCCACGCACCCGCGTGGGGTGCGACTTTTTCTATGAAAAGTGCGTAAAAAGCTCATATGAATTTCAATCCACGCACCCGCGTGGGGTGCGACTAAAAACTTATTGTTTCTATATGTATCTAGATAAATTTCAATCCACGCACCCGCGTGGGGTGCGAC

>NZ_CP011361|3|3|1674004-1674634|CRISPRCasFinder
GTCCCAACTTAAGCACCCGCGTGGGGTGCGAC	CAGGTCGCAGGGAACGCTTAGAAGCTATTGAACT
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	GAAAAACGCCAGTAACGGTAATGAAGAAACACAA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	AGCTTTTGCAGATATTCTCTATCCAGCTGCAAG
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	CTACCTCGGATGTGGCGGCTTGTTCCAGGTACGTCTG
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	ACAGCAATTCATCCAATACGTGCAGACAAATGGCCC
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	GCAGGTGCAGAAAGAAAAAGCAGAGCTCCAAGA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	AGTAACCACACAAAAAAGTGAATAAACACGTAATG
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	TTTTTCTATGAAAAGTGCGTAAAAAGCTCATATGA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	TAAAAACTTATTGTTTCTATATGTATCTAGATAA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC

>NZ_CP011361|3|1|1674004-1674634|CRT
GTCCCAACTTAAGCACCCGCGTGGGGTGCGAC	CAGGTCGCAGGGAACGCTTAGAAGCTATTGAACT
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	GAAAAACGCCAGTAACGGTAATGAAGAAACACAA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	AGCTTTTGCAGATATTCTCTATCCAGCTGCAAG
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	CTACCTCGGATGTGGCGGCTTGTTCCAGGTACGTCTG
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	ACAGCAATTCATCCAATACGTGCAGACAAATGGCCC
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	GCAGGTGCAGAAAGAAAAAGCAGAGCTCCAAGA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	AGTAACCACACAAAAAAGTGAATAAACACGTAATG
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	TTTTTCTATGAAAAGTGCGTAAAAAGCTCATATGA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	TAAAAACTTATTGTTTCTATATGTATCTAGATAA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC

>NZ_CP011361|3|1|1674070-1674301|PILER-CR
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	GAAAAACGCCAGTAACGGTAATGAAGAAACACAA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	AGCTTTTGCAGATATTCTCTATCCAGCTGCAAG
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	CTACCTCGGATGTGGCGGCTTGTTCCAGGTACGTCTG
ATTTCAATCCACGCACCCGCGTGGGGTGCGACACAGCAATTCATCCAATACGTGCAGACAAATGGCCCATTTCAATCCACGCACCCGCGTGGGGTGCGACGCAGGTGCAGAAAGAAAAAGCAGAGCTCCAAGAATTTCAATCCACGCACCCGCGTGGGGTGCGAC	AGTAACCACACAAAAAAGTGAATAAACACGTAAT
GATTTCAATCCACGCACCCGCGTGGGGTGCGAC	TTTTTCTATGAAAAGTGCGTAAAAAGCTCATATG
AATTTCAATCCACGCACCCGCGTGGGGTGCGAC	TAAAAACTTATTGTTTCTATATGTATCTAGATA


>NZ_CP011361|3|2|1674402-1674634|PILER-CR
	GAAAAACGCCAGTAACGGTAATGAAGAAACACAA
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	AGCTTTTGCAGATATTCTCTATCCAGCTGCAAG
ATTTCAATCCACGCACCCGCGTGGGGTGCGAC	CTACCTCGGATGTGGCGGCTTGTTCCAGGTACGTCTG
ATTTCAATCCACGCACCCGCGTGGGGTGCGACACAGCAATTCATCCAATACGTGCAGACAAATGGCCCATTTCAATCCACGCACCCGCGTGGGGTGCGACGCAGGTGCAGAAAGAAAAAGCAGAGCTCCAAGAATTTCAATCCACGCACCCGCGTGGGGTGCGAC	AGTAACCACACAAAAAAGTGAATAAACACGTAAT
GATTTCAATCCACGCACCCGCGTGGGGTGCGAC	TTTTTCTATGAAAAGTGCGTAAAAAGCTCATATG
AATTTCAATCCACGCACCCGCGTGGGGTGCGAC	TAAAAACTTATTGTTTCTATATGTATCTAGATA
AATTTCAATCCACGCACCCGCGTGGGGTGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011361.2\|WP_008592308.1\|1675090_1676122_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP011361.2\|WP_008592317.1\|1676764_1677634_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP011361.2\|WP_008592288.1\|1665008_1665380_-\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|376809
NZ_CP011361.2\|WP_008592293.1\|1667171_1668686_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NZ_CP011361.2\|WP_008592306.1\|1674792_1675083_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP011361.2\|WP_008592302.1\|1670865_1673010_-\|type-IA-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236078
NZ_CP011361.2\|WP_008592299.1\|1669909_1670440_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|224523
NZ_CP011361.2\|WP_040609888.1\|1684064_1685120_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274817
NZ_CP011361.2\|WP_008592319.1\|1677626_1679513_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP011361.2\|WP_008592289.1\|1665577_1666669_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|237717
NZ_CP011361.2\|WP_008592321.1\|1679527_1680232_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP011361.2\|WP_008592335.1\|1685132_1685699_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223508
NZ_CP011361.2\|WP_008592329.1\|1680508_1682896_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP011361.2\|WP_008592300.1\|1670439_1670814_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011361.2\|WP_008592314.1\|1676118_1676778_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP011361.2\|WP_008592295.1\|1668790_1669681_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176129
NZ_CP011361.2\|WP_008592304.1\|1673138_1673846_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|378975
NZ_CP011361.2\|WP_008592331.1\|1683607_1683946_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|334619
NZ_CP011361.2\|WP_008592291.1\|1666759_1666948_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011361.2\|WP_052034768.1\|1664652_1665006_-\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|223317

Protein	Function_ID	Function_description	E-value
NZ_CP011361.2\|WP_008592308.1\|1675090_1676122_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP011361.2\|WP_008592317.1\|1676764_1677634_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	2.99709e-121
NZ_CP011361.2\|WP_008592288.1\|1665008_1665380_-\|CrcB-family-protein	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	3.33672e-24
NZ_CP011361.2\|WP_008592293.1\|1667171_1668686_+\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	0
NZ_CP011361.2\|WP_008592306.1\|1674792_1675083_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.06462e-32
NZ_CP011361.2\|WP_008592302.1\|1670865_1673010_-\|type-IA-DNA-topoisomerase	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_CP011361.2\|WP_008592299.1\|1669909_1670440_+\|acyl-CoA-thioesterase	gnl\|CDD\|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	1.05917e-57
NZ_CP011361.2\|WP_040609888.1\|1684064_1685120_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274817	TIGR03858, LLM_2I7G, probable oxidoreductase, LLM family. This model describes a highly conserved, somewhat broadly distributed family withing the luciferase-like monooxygenase (LLM) superfamily. Most members are from species incapable of synthesizing coenzyme F420, bound by some members of the LLM superfamily. Members, therefore, are more likely to use FMN as a cofactor.	7.13943e-116
NZ_CP011361.2\|WP_008592289.1\|1665577_1666669_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|237717	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional.	0
NZ_CP011361.2\|WP_008592321.1\|1679527_1680232_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.37135e-94
NZ_CP011361.2\|WP_008592335.1\|1685132_1685699_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|223508	COG0431, COG0431, Predicted flavoprotein [General function prediction only].	2.19975e-30
NZ_CP011361.2\|WP_008592329.1\|1680508_1682896_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.07205e-66
NZ_CP011361.2\|WP_008592314.1\|1676118_1676778_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.68924e-28
NZ_CP011361.2\|WP_008592295.1\|1668790_1669681_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176129	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold. This CD includes the substrate binding domain of CidR which positively up-regulates the expression of cidABC operon in the presence of acetic acid produced by the metabolism of excess glucose. The CidR affects the control of murein hydrolase activity by enhancing cidABC expression in the presence of acetic acid. Thus, up-regulation of cidABC expression results in increased murein hydrolase activity. This substrate binding domain has significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.7087e-89
NZ_CP011361.2\|WP_008592304.1\|1673138_1673846_-\|metallophosphoesterase-family-protein	gnl\|CDD\|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	2.13124e-16
NZ_CP011361.2\|WP_008592331.1\|1683607_1683946_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|334619	pfam01638, HxlR, HxlR-like helix-turn-helix. HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis.	3.31088e-40
NZ_CP011361.2\|WP_008592319.1\|1677626_1679513_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	2.98952e-147
NZ_CP011361.2\|WP_052034768.1\|1664652_1665006_-\|CrcB-family-protein	gnl\|CDD\|223317	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning].	2.26422e-21

>NZ_CP011361.2|WP_008592304.1|1673138_1673846_-|metallophosphoesterase-family-protein
MKTAFIADIHGNATALQAVLDDIKRQGADRVVMLGDLCYRGPEPKKSLDLIRNLDAPVIKGNADAWITRGVRDGEVPEKNIKMMREEREWVADKLTEEDISYLKNLPESVTETIGEKDVYCVHATPDSLFDVVKPDTPEEQVKEEYFDKKEADVYLYGHIHLPYVRPLEGKVIANTGSVGLPFDSDPRASYLIVSENSMELRKVSYDVEEAVNKLYENDYPQADLVADVYRSGSL
>NZ_CP011361.2|WP_008592302.1|1670865_1673010_-|type-IA-DNA-topoisomerase
MTKVVILAEKPSQAKAYAEAFSVQTKTKTHIQLKPDPIFPEGATITWGVGHLVELKEPQDYRKEWKKWKLEELPIVPEIFQEKVAKGKWEQFQAVKQLFKQADVIVNAADVDREGSNIFYSIYTLIGVKKPVKRLWINSLEKDEVREGFRQLQNNEKDRRMFEEAKARQISDWLVGMNASRLFTLHLQKKGFGSHLSIGRVQSPTVYLIYQRHKEIEEFVPEPFYQIEGSFKAKKGTYKGLAKIKEKDKAKVQALIDEHSLKKEDTYRGTVRKVDKKEKRIRSPKLHSLSTLQSVANRMWKYPPAKVLKIAQQLYEKKLLSYPRTDCNFITQGEFNYLVKKADDYQQVLGTSFTPATLRPDKRYVNGAKVEEHYAIIPTKTAPTAKKLEGLSREERNIYNEVLAVTLGMFHRNHVYEETKIHTDVHGLVFFSTGKREVDAGWKELFPKQKRKEEMLPEVKEGEEPEAEVHIKESMTQPPKPYTEGQLITMMKTAGKTVEDEEDVEILKEVEGLGTEATRSGIIETIKKQNYISVTKNNVAITDKGIMLCEAIEGTLLSSPSMTAKWEAYLRKIGEGEGSKQTFIDNTEKFIRKLMKEAPSSLEKVQLRDIGETKKKWNEPIVTCPSCKTGAIVDRYKFYACSGYKDGCKVTFPKRLAGKTLTENMIKTLCEKKKTKVLKGFKSKNKKTFSTALTLDEDYNIKFDFGVPAKDKTK
>NZ_CP011361.2|WP_008592300.1|1670439_1670814_+|hypothetical-protein
MTHMVAGLNQLYKVKRDVDDLQRAYPDLGEQLVHVVSLTRQLQLKYGYMASLIKNEELPKYAPKFLRTSILSLYQEEVQKLKEHPDIDELKQLLKKYENISDSTVFLMILGAKPELLQGSVIMD
>NZ_CP011361.2|WP_008592299.1|1669909_1670440_+|acyl-CoA-thioesterase
METKHPKESLIVNTDQVMINDLNNYNTLFGGTLMKKLDNNATLSARRYARAKECVTASTDSIDFLHPIHQSDSVCVESYVSYTGNKSMEIFCKVIAEDMITGERRMAATAFLTFVALDDNKKPITVPRLVPETEEEKFLYESGKERAERRRIRKQHSKELTEIIGLEKPWEKGVHV
>NZ_CP011361.2|WP_008592295.1|1668790_1669681_+|LysR-family-transcriptional-regulator
MDIRHLTYFIEVTRFESFTRAAEHLYVTQPTISKMIKNLETELGVELFDRSRKQLVLTDAGRAIYDKAKTIVKASENLQTELDDLIGLQKGHIRIGLPPILDAELFIGILGEFHQLHPRITFELIENGTKKIEEDILNEHLDAGIAVLPPQEEEFDTFSFIKEELKAVLPASHPLAGRKRIDLEELKDDDFITFNRDFALYERIHDACLSAGFVPKTISETSQWDFIGKMITSGLGISILPYSVANLLKEDLRLVKIRNPSLEWNVGLIWRKNHYLSYATREWLRFTQERLIENSS
>NZ_CP011361.2|WP_008592293.1|1667171_1668686_+|BCCT-family-transporter
MKKVSSVFWYGIIVCFIFVLWGVIGPENLKTVTAATTSFISTRFGWYYLLIVMVMLAFCVYLIFSRFSHIKLGKQDEKPEFGLASWFAMLFSAGMGMGLVFWTTAEPISHAFNNSPTAEPGSEQAIMDSLRFSFFHWGLHAWAIYALVALVLAYFKFHKDYPGLVSATLTPIFGEDRMKGTLGKIIDTLAIVATVTGVAATLGFGTAQINQGLAFLFDAPGNYWVQLIILVVATVLFIFSAWSGVSKGIKYLSNINMILGIALMVLLLIIGPTLYIMNMFTASIGGYVANFFDMSFRIAPMNEENRTWIDSWTIFYWAWWISWSPFVGIFIARISRGRTIKEFMLGVLFVPSIICFVFFTVFGVSALEVEQSGLATISDYPMETATFATLAEYPLGFFMSLITLVVIAIFFITSADSATFVLGMLSSEGSLEPGGRVKIIWGLTLSAMAAIITYFGGTQGLQNVLIIAAFPFSIVVLMMGYSFYKAASREVSPKRKRKKENKAV
>NZ_CP011361.2|WP_008592291.1|1666759_1666948_-|hypothetical-protein
MVWWFTIGMSVLGGLITLTAVFDKKNKNDSYSRYDNEETVEEFYREHGAVSKAEDPEYTKYF
>NZ_CP011361.2|WP_008592289.1|1665577_1666669_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MKTSIYGLTFEQLTDWLVDHGEKKFRSKQVWEWLYQKRVTDFDDMKNVNQSCIDVLKENFTIETLSEEIKQESEDGTVKYLFKLHDGNIIETVLMRFNYGLSVCVTTQVGCNIGCSFCASGVLRKNRDLTGGEITEQIMKVQHDLDGKQKGERVSHIVVMGIGEPFDNYDNLIDFLNVVNDKKGLSIGARHITVSTSGIAPKMYEFADEGIQINLALSIHAPNNELRTQIMKINRAYPLEKLMPAIDYYLEKTNRRITFEYILLKDVNDHVKEAHQLADLLMDKKHLSYVNLIPYNPVADNPYERSDKEAILNFYQTLMDRGIKCGVRTEHGTDIDAACGQLRSKQIEKEKARKKGKKEKAGV
>NZ_CP011361.2|WP_008592288.1|1665008_1665380_-|CrcB-family-protein
MIYIFIAVAGFIGAVLRYITGEVLFRPDTIFPFATLFINIVGSFLLSWLTFHTLPMSAQLKKAIGTGVLGSFTTFSTLSAETVSLLEREFYAVAFLYISLSFAGGTIAAIAGSKAGPGKGGEM
>NZ_CP011361.2|WP_052034768.1|1664652_1665006_-|CrcB-family-protein
MLSIILVGLGGSIGALLRFSFSEKWNSGSFPTGTLAVNWFGSFFLGALIGAGFSGHPFLFAGTGMAGALTTFSTMQLEGITLYKRIERKRFLLYQFISYTGGIALAWAGMWAGRLFH
>NZ_CP011361.2|WP_008592306.1|1674792_1675083_-|CRISPR-associated-endonuclease-Cas2
MLVLITYDVQTSSEGGSKRLRKVAKTCQSYGQRVQHSVFECVIDSSQFVTLKHKLKNIIDFEKDSLRFYRLGNEYKDKVEHVGVKESLDVEDPLIF
>NZ_CP011361.2|WP_008592308.1|1675090_1676122_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKRLLNTLFVNQPDVYLSLRGDNVVLSKDKKELAKMPLHNLESIVAFGYTGASPALMGYCAERNISIVFMTKTGRFLARVVGESRGNVVLRKTQYKISESERKSAFIAKNFIVGKVFNNKWVIERSIRDHGLRLDEQRLKGISNTLTELLASIRNVEDLENLRGWEGQAAYSYNKVFDDMILSQKEDFYFHNRNRRPPLDNVNALLSFAYTLLANDTASGLEGVGLDAYVGFLHRDRPGRVSLALDMMEELRGCYADRFVLSLINRNIFTNEDFYQKENGAIILKEESRKKFLQAWQKKKQEKITHPYLKEKISWGLVPHAQALLLARYLRGDIDEYPPFLWK
>NZ_CP011361.2|WP_008592314.1|1676118_1676778_-|CRISPR-associated-protein-Cas4
MRDNKENEYLMLSGIQHFRFCRRQWALIHIEQQWAENAKTTEGNIMHKKADNPFVKEKRGEKIVARGMPIKSEELKLSGICDVVEFSKNDHGVPLHGSTETYEVFPVEYKRGKPKKDRTDILQLTAQAICLEEMLVTEVKKGYIYYGETKRREEVHFTLELRNELKNVASEMHDYFKRRYTPIVKTGKFCESCSLKDMCLPHLMNKESVRGYIERVISE
>NZ_CP011361.2|WP_008592317.1|1676764_1677634_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSNNTLKNKIDFAVVLSVSKANPNGDPLNGNRPRQDFDGLGEISDVAIKRKIRNRLMDMGEKVFVQSNDRKMDEYDSLKARASGKKELEEILKDKADRDEEFASLACEEWIDVRSFGQVFAYKGSNKGSGVSVGVRGPVSIHTATSLDPVDVTSTQITKSVNSESGDKRGSDTMGMKHRVDFGVYVFYGSINPQLAEKTGFTHEDAMKIKEALRTLFENDSSSARPEGSMEVNKLYWWEHDSKLGKHSAAKVHRSLNISRNVDSPHTIKDYEIRVEELTDLQVEEIEGQ
>NZ_CP011361.2|WP_008592319.1|1677626_1679513_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MNWLKQLYETYEENKQEIGEIKIRDNGQEYTLLPIAHTTQNAHIEVYVTSEGRFHSAYVIDKEDTGTTIPTTEDSANRAGAKVAPYPLHDKLVYVAGDYSDYTGENKTENFNAYIKQLEEWANSLYTHEDVKSVYEYLKNATLISDLIMEDILHEDSSGKLLKKWSKEMEEERGPKPDIFKVLPGDQQAAFIRFRIHDPVKEHKPIWKNKNVFNAYVNFYESQFEEEDLCFVLGKRLPKTTKHASKIRNAADKAKLISANDTSGFTFRGRFTDSEQVAGISYEASQKAHNALKWLIRRQGTAIGERVFLVWGQKNPDAPDLRNDSLSLTPDIKFNNEVVTKEGYAKEFSKALKGYRHNLPPEENVNIIILDAATTGRLGVLYYKTLIIDDYLDRLRNWHTTTVWKQSIKREKEKIYFFGAPSLKDIAYAAYGFSADDKIIRDTIERLIPSIIDQRPVPTDLARQTFQRASSPESMQQWMWEKTLGVSCALINNSLSKKGEGKDLAIEYDNEDRSYLFGRLLASADVLERRAHGADENRPTNAIRYMSAFSKHPARTWKVIREQLLPYQQRLGRQGIDVLRVMESVESTMHSTQYNDQPLTGLYLLGFSSQREELFKSKKDKEGEMTNE
>NZ_CP011361.2|WP_008592321.1|1679527_1680232_-|type-I-C-CRISPR-associated-protein-Cas5
MRNEIEFEVHGKYALFTDPLTKIGGEKLSYNVPTYEALKGITESIYWKPTLTFIIDDLRIMKSISMESKGVRPIQYHGGNTLANYTYLRDVRYQVRAHFEFNASRPELYHDYNEGKHFSILHRALNAGGRRDIFLGARECQGYVEPCKFGEGAGAYDNQEEYHLGTMVHGINYPSDIEKDEMQVRLWNPVMKNGIISFQRPEECRNVRKIRDMKRKEFDETNMTSVDDLFEQLK
>NZ_CP011361.2|WP_008592329.1|1680508_1682896_-|CRISPR-associated-helicase/endonuclease-Cas3
MNFIAHVREEDGREQMLRDHLVEVKELGEKFGEPLHLSYTIGLAGLLHDIGKYTVEFQTYLNEAVNNPDCPPKKGSVVHSRAGGKLLYDLLHNGKPGSLAKGLVAEIVGNAIISHHAYINDFIRPSDLDTPYRNSVVEKEVNEYHDLKQRFFRDVMKEEELTEYIKKAIIEIDEIINDTPQEEVYSTMSYVTKMVYSSLIDADRTNTRDFEQNLKKTAPPSMNVYYNRLTTHLQQFENPHNPINKLRNEMSEICDEFAEKPSGIYTLSIPTGGGKTLASLRYALKHASLYSKERIFFIVPFTTIIEQNAEEVRSILQEYSYILEHHSNVVTHDSEEEDEGALDAHQKLKIAEENWDTPIVFTTMVQYLNAIYHRKSSSARRLHNLSNSVLIFDEVQKVPSDCVSLFNLSVNYLCHYANSSAILCTATQPSLEYVHNKLKIQEDAEIIPHIEKISRKFERVDVVDCATDGQMNNDDLKNFILDKKDKEASVLIILNTKQVVKDLYHKMKESTSYDIYHLSTAMCAEHRRNFIDKINEKVKSGQDMICISTQLVEAGVDLDFDCVIRSAAGLDSIAQAAGRCNRNGKAEKKNVYVINHSEESLSKLKEMKIGKNISLRLMKDIKKDPAKNILEPYVMKRYFREFYQEVQNRLDYPIPNTTDETMINWLSDNRITVTNYVQRNDSPDFILRNSIRSAAEKFQVIPDLTTSVIVPYCKEGKDVIATLNDGQTIEELSDFLKKAQKFSVNVFPHELQTLQKKNGVRGYIDGSVKVLVEGFYDDEFGLAISGEVGSGGLIY
>NZ_CP011361.2|WP_008592331.1|1683607_1683946_-|helix-turn-helix-transcriptional-regulator
MNEHIKPDQCQVQEAIGILVGKWKPIILLHLMKEGTQRFSELKREIPEITQKMLTKQLRELEAEGIVDRKVYPEVPPKVEYSITEYGKELQPILEAMHKWGEKHARAKRERA
>NZ_CP011361.2|WP_040609888.1|1684064_1685120_+|LLM-class-flavin-dependent-oxidoreductase
MMKYGLDPSNGLEFGLYTLGDHLPNPSTGERIPASQRLNEIIELSQLAEQAGIDFFSVGESHQDYFTTQAHSVVLGAIAQATEKIKIASSSTIISTLDPVRVFEDFATIDLISGGRTELIAGRASRTGNFELLGYSLKDYEELYEEKFDLLRQINEQEVLNWSGNFRAPLRDAHILPRPMNGELPIWRAVGGHPASAMKAGYEGVPMFFAALGGPVSTFKNTVDTFRQAAAQGGHNPDELPVSMAGFFYPGETTQEALRESYPFFNEGMKKTNGHGFSKQMFAQGADSRSVMNVGSPQQIIEKILYQHETFGHQRYIAQMDFGGVPFEKLKKNIDMIGEKILPEVKKHTKK
>NZ_CP011361.2|WP_008592335.1|1685132_1685699_+|NAD(P)H-dependent-oxidoreductase
MRIVGLAGSKVGSKTRTAMDYVKESVERQYPDHTFTLIDLGDNDVEFSDGRNYLDYKGDTGYVAQTIMEADAVLIGTPIFQASIPATLKNIFDLLPQDGLEGKIVSIYATAGSDKHFLIPEQQLKPILGYMKAQIVQTYVFLNDEDFLNKKIISDDVFFRLDRLVEDTMVLTETYRQIREAEDAKYDF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_KX274135	Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence	25142-25175	2	0.941
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_016054	Staphylococcus arlettae strain 2-144 plasmid pSS-03, complete sequence	1165-1198	2	0.941
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP013629	Staphylococcus aureus strain RIVM4256 plasmid pRIVM4256, complete sequence	388-421	2	0.941
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_016139	Staphylococcus hyicus plasmid p9811071-1, complete sequence	2097-2130	2	0.941
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_019144	Staphylococcus aureus plasmid pMSA16, complete sequence	6989-7022	2	0.941
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_007621	Staphylococcus saprophyticus pSES22 plasmid, isolate 44	3975-4008	2	0.941
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_MH423314	Staphylococcus lentus strain Sle-341Lar plasmid pSle-341Lar, complete sequence	13384-13417	2	0.941
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NZ_KX274135	Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence	25142-25174	2	0.939
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NC_019144	Staphylococcus aureus plasmid pMSA16, complete sequence	6990-7022	2	0.939
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NC_016054	Staphylococcus arlettae strain 2-144 plasmid pSS-03, complete sequence	1165-1197	2	0.939
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NZ_CP013629	Staphylococcus aureus strain RIVM4256 plasmid pRIVM4256, complete sequence	388-420	2	0.939
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NC_007621	Staphylococcus saprophyticus pSES22 plasmid, isolate 44	3976-4008	2	0.939
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NC_016139	Staphylococcus hyicus plasmid p9811071-1, complete sequence	2097-2129	2	0.939
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NZ_MH423314	Staphylococcus lentus strain Sle-341Lar plasmid pSle-341Lar, complete sequence	13385-13417	2	0.939
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_014367	Pediococcus pentosaceus plasmid pPS1, complete sequence	3-36	3	0.912
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NC_014367	Pediococcus pentosaceus plasmid pPS1, complete sequence	4-36	3	0.909
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_KY579373	Staphylococcus epidermidis strain M13/0451 plasmid unnamed, complete sequence	1137-1170	4	0.882
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_MF503689	Bacillus zhangzhouensis strain DW5-4 plasmid pDW5-4, complete sequence	1851-1884	4	0.882
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_004932	Bacillus pumilus plasmid pPL7065, complete sequence	2879-2912	4	0.882
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_MH581228	Bacillus pumilus strain BIM 394 plasmid pBP-B394, complete sequence	1042-1075	4	0.882
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_MH522715	Bacillus pumilus strain MRL1 plasmid pBP-MRL1, complete sequence	192-225	4	0.882
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NZ_KY579373	Staphylococcus epidermidis strain M13/0451 plasmid unnamed, complete sequence	1137-1169	4	0.879
NZ_CP011361_3	3.6\|1674370\|33\|NZ_CP011361\|CRISPRCasFinder,CRT	1674370-1674402	33	MT416612	Bacillus phage YungSlug, complete genome	94382-94414	6	0.818
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_013534	Bacillus pumilus plasmid pPZZ84, complete sequence	5587-5620	7	0.794
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_001757	Lactobacillus reuteri 100-23 plasmid pGT232, complete sequence	1083-1116	7	0.794
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	72082-72115	7	0.794
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NC_013534	Bacillus pumilus plasmid pPZZ84, complete sequence	5588-5620	7	0.788
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_KX274135	Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence	18089-18122	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_KY290886	Enterococcus faecalis strain Transconjugant T4 plasmid pJH-T4, complete sequence	12879-12912	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_KY264168	Enterococcus faecalis strain Transconjugant T4 plasmid pLAG, complete sequence	25444-25477	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	MK798157	Enterococcus hirae strain fas4 plasmid pfas4-1, complete sequence	30001-30034	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP041740	Enterococcus faecalis EnGen0107 strain B594 plasmid p2, complete sequence	21363-21396	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP018072	Enterococcus faecium strain VRE001 plasmid unnamed2, complete sequence	8827-8860	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP018072	Enterococcus faecium strain VRE001 plasmid unnamed2, complete sequence	53001-53034	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	188570-188603	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_LR135282	Enterococcus faecium isolate E6975 plasmid 5	15793-15826	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_LR135256	Enterococcus faecium isolate E7098 plasmid 3	142580-142613	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_012547	Staphylococcus aureus plasmid pGO1, complete sequence	19380-19413	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_005024	Staphylococcus aureus plasmid pSK41, complete sequence	19380-19413	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_005013	Enterococcus faecalis DS5 plasmid pAMalpha1, complete sequence	1910-1943	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_013320	Staphylococcus aureus plasmid SAP014A, complete sequence	33016-33049	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_LR135484	Enterococcus faecium isolate E4456 plasmid 3	14108-14141	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_LR135327	Enterococcus faecium isolate E7654 plasmid 4	19105-19138	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_LR135320	Enterococcus faecium isolate E7663 plasmid 4	7702-7735	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP042651	Staphylococcus aureus strain X22 plasmid unnamed, complete sequence	24216-24249	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_001384	Staphylococcus aureus plasmid pUB110, complete sequence	4269-4302	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_001705	Bacillus cereus plasmid pBC16, complete sequence	4351-4384	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_AP019752	Staphylococcus aureus strain JRA307 plasmid pJRA307-1, complete sequence	18847-18880	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_LR134097	Enterococcus faecium isolate E1334 plasmid 3	16268-16301	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP013627	Staphylococcus aureus strain RIVM1183 plasmid pRIVM1183, complete sequence	1141-1174	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP039166	Staphylococcus aureus strain R46 plasmid pR46-2, complete sequence	1173-1206	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	AP012550	Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G	16056-16089	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP026963	Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1	22712-22745	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_013372	Staphylococcus epidermidis plasmid SAP016A, complete sequence	36634-36667	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP038165	Enterococcus faecium strain HB2-2 plasmid pHB2-2, complete sequence	23932-23965	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP038171	Enterococcus faecium strain SDGJP3 plasmid pSDGJP3, complete sequence	20412-20445	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP038176	Enterococcus faecium strain HN11 plasmid pHN11, complete sequence	48324-48357	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP038173	Enterococcus faecium strain YN2-1 plasmid pYN2-1, complete sequence	1975-2008	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_MH587578	Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence	2824-2857	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_MG957432	Enterococcus faecium strain 37BA plasmid pEf37BA, complete sequence	33169-33202	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_KY389065	Staphylococcus sciuri strain P723 plasmid pSSC723, complete sequence	1881-1914	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_KT780704	Staphylococcus aureus subsp. aureus RN4220 plasmid pRM27, complete sequence	24376-24409	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_KP345886	Enterococcus faecium isolate P39 plasmid unnamed, complete sequence	16688-16721	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_003528	Lactobacillus reuteri plasmid pTE44, complete sequence	1331-1364	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_LR135183	Enterococcus faecium isolate E1774 plasmid 3	2003-2036	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_004532	Lactobacillus reuteri endogenous plasmid, complete sequence	1491-1524	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_LR135483	Enterococcus faecium isolate E4456 plasmid 2	144083-144116	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_019051	Escherichia coli plasmid pAm05WL6211, complete sequence	1876-1909	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_019052	Escherichia coli plasmid pAm08CQ6130, complete sequence	1611-1644	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_LR135221	Enterococcus faecium isolate E7040 plasmid 3	59850-59883	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	36753-36786	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP011830	Enterococcus faecium strain UW8175 plasmid unnamed2, complete sequence	19839-19872	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP012913	Streptococcus suis strain NSUI060 plasmid pNSUI060b, complete sequence	3273-3306	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	MN831411	Enterococcus faecium strain M16/0594 plasmid pM16/0594, complete sequence	5907-5940	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP023426	Enterococcus faecium strain K60-39 plasmid pTT39_p3, complete sequence	26536-26569	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP033100	Staphylococcus warneri strain SWO plasmid unnamed2, complete sequence	23227-23260	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_017961	Enterococcus faecium DO plasmid 1, complete sequence	17835-17868	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_022618	Staphylococcus epidermidis plasmid pSWS47, isolate 47, complete sequence	11444-11477	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_014156	Staphylococcus aureus subsp. aureus ST398 plasmid pKKS627, complete sequence	6132-6165	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP037957	Enterococcus hirae strain CQP3-9 plasmid pCQP3-9_2, complete sequence	4779-4812	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP053472	Staphylococcus warneri strain WB224 plasmid pWB224_2, complete sequence	24316-24349	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP029661	Staphylococcus aureus strain AR_0228 plasmid unnamed1, complete sequence	22081-22114	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_CP038169	Enterococcus faecium strain SCBC1 plasmid pSCBC1, complete sequence	2449-2482	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_016009	Enterococcus faecium plasmid pM7M2, complete sequence	6458-6491	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_MH784601	Enterococcus faecium strain 25 plasmid pC25-1, complete sequence	50458-50491	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_MH784602	Enterococcus faecium strain 27 plasmid pC27-2, complete sequence	45166-45199	8	0.765
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NZ_MK046687	Staphylococcus epidermidis strain 107.2 plasmid pAQZ1, complete sequence	19846-19879	8	0.765
NZ_CP011361_3	3.10\|1674435\|34\|NZ_CP011361\|PILER-CR	1674435-1674468	34	NZ_CP053936	Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed4, complete sequence	704-737	8	0.765
NZ_CP011361_3	3.10\|1674435\|34\|NZ_CP011361\|PILER-CR	1674435-1674468	34	NZ_CP053933	Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed2, complete sequence	52443-52476	8	0.765
NZ_CP011361_3	3.10\|1674435\|34\|NZ_CP011361\|PILER-CR	1674435-1674468	34	NZ_CP009718	Bacillus thuringiensis strain HD682 plasmid pBGN_2, complete sequence	26435-26468	8	0.765
NZ_CP011361_3	3.12\|1674569\|33\|NZ_CP011361\|PILER-CR	1674569-1674601	33	NC_001764	Bacillus subtilis plasmid pTA1040, complete sequence	1-29	8	0.758
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	NC_001764	Bacillus subtilis plasmid pTA1040, complete sequence	1-29	9	0.735
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	HG796789	Uncultured bacterium plasmid pRGF00031	2632-2665	9	0.735
NZ_CP011361_3	3.9\|1674569\|34\|NZ_CP011361\|CRISPRCasFinder,CRT	1674569-1674602	34	KX785321	Streptococcus suis strain 6936 plasmid unnamed1, complete sequence	6284-6317	11	0.676
NZ_CP011361_2	2.1\|632162\|43\|NZ_CP011361\|CRISPRCasFinder	632162-632204	43	NZ_CP010110	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence	69854-69896	12	0.721

1. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_KX274135 (Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence) position: , mismatch: 2, identity: 0.941

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagataa	Protospacer
*********.***************** ******

2. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_016054 (Staphylococcus arlettae strain 2-144 plasmid pSS-03, complete sequence) position: , mismatch: 2, identity: 0.941

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagataa	Protospacer
*********.***************** ******

3. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP013629 (Staphylococcus aureus strain RIVM4256 plasmid pRIVM4256, complete sequence) position: , mismatch: 2, identity: 0.941

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagataa	Protospacer
*********.***************** ******

4. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_016139 (Staphylococcus hyicus plasmid p9811071-1, complete sequence) position: , mismatch: 2, identity: 0.941

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagataa	Protospacer
*********.***************** ******

5. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_019144 (Staphylococcus aureus plasmid pMSA16, complete sequence) position: , mismatch: 2, identity: 0.941

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagataa	Protospacer
*********.***************** ******

6. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_007621 (Staphylococcus saprophyticus pSES22 plasmid, isolate 44) position: , mismatch: 2, identity: 0.941

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagataa	Protospacer
*********.***************** ******

7. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_MH423314 (Staphylococcus lentus strain Sle-341Lar plasmid pSle-341Lar, complete sequence) position: , mismatch: 2, identity: 0.941

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagataa	Protospacer
*********.***************** ******

8. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NZ_KX274135 (Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence) position: , mismatch: 2, identity: 0.939

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagata	Protospacer
*********.***************** *****

9. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NC_019144 (Staphylococcus aureus plasmid pMSA16, complete sequence) position: , mismatch: 2, identity: 0.939

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagata	Protospacer
*********.***************** *****

10. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NC_016054 (Staphylococcus arlettae strain 2-144 plasmid pSS-03, complete sequence) position: , mismatch: 2, identity: 0.939

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagata	Protospacer
*********.***************** *****

11. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NZ_CP013629 (Staphylococcus aureus strain RIVM4256 plasmid pRIVM4256, complete sequence) position: , mismatch: 2, identity: 0.939

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagata	Protospacer
*********.***************** *****

12. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NC_007621 (Staphylococcus saprophyticus pSES22 plasmid, isolate 44) position: , mismatch: 2, identity: 0.939

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagata	Protospacer
*********.***************** *****

13. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NC_016139 (Staphylococcus hyicus plasmid p9811071-1, complete sequence) position: , mismatch: 2, identity: 0.939

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagata	Protospacer
*********.***************** *****

14. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NZ_MH423314 (Staphylococcus lentus strain Sle-341Lar plasmid pSle-341Lar, complete sequence) position: , mismatch: 2, identity: 0.939

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagata	Protospacer
*********.***************** *****

15. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_014367 (Pediococcus pentosaceus plasmid pPS1, complete sequence) position: , mismatch: 3, identity: 0.912

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaaacttgttgtttctatatgtatcaagataa	Protospacer
 ********.***************** ******

16. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NC_014367 (Pediococcus pentosaceus plasmid pPS1, complete sequence) position: , mismatch: 3, identity: 0.909

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
aaaaaacttgttgtttctatatgtatcaagata	Protospacer
 ********.***************** *****

17. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_KY579373 (Staphylococcus epidermidis strain M13/0451 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.882

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagaata	Protospacer
*********.***************** ***  *

18. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_MF503689 (Bacillus zhangzhouensis strain DW5-4 plasmid pDW5-4, complete sequence) position: , mismatch: 4, identity: 0.882

taaaaactta-ttgtttctatatgtatctagataa	CRISPR spacer
-aaaaattgagttgtttctatatgtatcaagataa	Protospacer
 *****.* * ***************** ******

19. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_004932 (Bacillus pumilus plasmid pPL7065, complete sequence) position: , mismatch: 4, identity: 0.882

taaaaactta-ttgtttctatatgtatctagataa	CRISPR spacer
-aaaaattgagttgtttctatatgtatcaagataa	Protospacer
 *****.* * ***************** ******

20. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_MH581228 (Bacillus pumilus strain BIM 394 plasmid pBP-B394, complete sequence) position: , mismatch: 4, identity: 0.882

taaaaactta-ttgtttctatatgtatctagataa	CRISPR spacer
-aaaaattgagttgtttctatatgtatcaagataa	Protospacer
 *****.* * ***************** ******

21. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_MH522715 (Bacillus pumilus strain MRL1 plasmid pBP-MRL1, complete sequence) position: , mismatch: 4, identity: 0.882

taaaaactta-ttgtttctatatgtatctagataa	CRISPR spacer
-aaaaattgagttgtttctatatgtatcaagataa	Protospacer
 *****.* * ***************** ******

22. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NZ_KY579373 (Staphylococcus epidermidis strain M13/0451 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.879

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
taaaaacttgttgtttctatatgtatcaagaat	Protospacer
*********.***************** ***

23. spacer 3.6|1674370|33|NZ_CP011361|CRISPRCasFinder,CRT matches to MT416612 (Bacillus phage YungSlug, complete genome) position: , mismatch: 6, identity: 0.818

gcaggtgcagaaagaaaaagcagagctccaaga	CRISPR spacer
gcaaacacagaaagaaaacgcacagctccaaga	Protospacer
***....*********** *** **********

24. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_013534 (Bacillus pumilus plasmid pPZZ84, complete sequence) position: , mismatch: 7, identity: 0.794

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaagacacgattgtttctatatgtatcaagataa	Protospacer
 **.*  . ****************** ******

25. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_001757 (Lactobacillus reuteri 100-23 plasmid pGT232, complete sequence) position: , mismatch: 7, identity: 0.794

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatggcgttgtttctatatgtatcaagataa	Protospacer
 ****   ..***************** ******

26. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 7, identity: 0.794

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
taaaatgacgttatttctatatgtatcaagataa	Protospacer
*****   ..**.************** ******

27. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NC_013534 (Bacillus pumilus plasmid pPZZ84, complete sequence) position: , mismatch: 7, identity: 0.788

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
aaagacacgattgtttctatatgtatcaagata	Protospacer
 **.*  . ****************** *****

28. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_KX274135 (Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

29. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_KY290886 (Enterococcus faecalis strain Transconjugant T4 plasmid pJH-T4, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

30. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_KY264168 (Enterococcus faecalis strain Transconjugant T4 plasmid pLAG, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

31. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to MK798157 (Enterococcus hirae strain fas4 plasmid pfas4-1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

32. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP041740 (Enterococcus faecalis EnGen0107 strain B594 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

33. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP018072 (Enterococcus faecium strain VRE001 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

34. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP018072 (Enterococcus faecium strain VRE001 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

35. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

36. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_LR135282 (Enterococcus faecium isolate E6975 plasmid 5) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

37. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_LR135256 (Enterococcus faecium isolate E7098 plasmid 3) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

38. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_012547 (Staphylococcus aureus plasmid pGO1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

39. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_005024 (Staphylococcus aureus plasmid pSK41, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

40. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_005013 (Enterococcus faecalis DS5 plasmid pAMalpha1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

41. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_013320 (Staphylococcus aureus plasmid SAP014A, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

42. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_LR135484 (Enterococcus faecium isolate E4456 plasmid 3) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

43. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_LR135327 (Enterococcus faecium isolate E7654 plasmid 4) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

44. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_LR135320 (Enterococcus faecium isolate E7663 plasmid 4) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

45. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP042651 (Staphylococcus aureus strain X22 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

46. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_001384 (Staphylococcus aureus plasmid pUB110, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

47. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_001705 (Bacillus cereus plasmid pBC16, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

48. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_AP019752 (Staphylococcus aureus strain JRA307 plasmid pJRA307-1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

49. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_LR134097 (Enterococcus faecium isolate E1334 plasmid 3) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

50. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP013627 (Staphylococcus aureus strain RIVM1183 plasmid pRIVM1183, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

51. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP039166 (Staphylococcus aureus strain R46 plasmid pR46-2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

52. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to AP012550 (Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

53. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP026963 (Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

54. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_013372 (Staphylococcus epidermidis plasmid SAP016A, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

55. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP038165 (Enterococcus faecium strain HB2-2 plasmid pHB2-2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

56. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP038171 (Enterococcus faecium strain SDGJP3 plasmid pSDGJP3, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

57. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP038176 (Enterococcus faecium strain HN11 plasmid pHN11, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

58. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP038173 (Enterococcus faecium strain YN2-1 plasmid pYN2-1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

59. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_MH587578 (Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

60. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_MG957432 (Enterococcus faecium strain 37BA plasmid pEf37BA, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

61. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_KY389065 (Staphylococcus sciuri strain P723 plasmid pSSC723, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

62. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_KT780704 (Staphylococcus aureus subsp. aureus RN4220 plasmid pRM27, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

63. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_KP345886 (Enterococcus faecium isolate P39 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

64. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_003528 (Lactobacillus reuteri plasmid pTE44, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttgtttctataagtatcaagataa	Protospacer
 ****   ..*********** ***** ******

65. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_LR135183 (Enterococcus faecium isolate E1774 plasmid 3) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

66. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_004532 (Lactobacillus reuteri endogenous plasmid, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttgtttctataagtatcaagataa	Protospacer
 ****   ..*********** ***** ******

67. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_LR135483 (Enterococcus faecium isolate E4456 plasmid 2) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

68. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_019051 (Escherichia coli plasmid pAm05WL6211, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

69. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_019052 (Escherichia coli plasmid pAm08CQ6130, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

70. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_LR135221 (Enterococcus faecium isolate E7040 plasmid 3) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

71. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

72. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP011830 (Enterococcus faecium strain UW8175 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

73. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP012913 (Streptococcus suis strain NSUI060 plasmid pNSUI060b, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

74. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to MN831411 (Enterococcus faecium strain M16/0594 plasmid pM16/0594, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

75. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP023426 (Enterococcus faecium strain K60-39 plasmid pTT39_p3, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

76. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP033100 (Staphylococcus warneri strain SWO plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

77. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_017961 (Enterococcus faecium DO plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

78. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_022618 (Staphylococcus epidermidis plasmid pSWS47, isolate 47, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

79. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_014156 (Staphylococcus aureus subsp. aureus ST398 plasmid pKKS627, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

80. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP037957 (Enterococcus hirae strain CQP3-9 plasmid pCQP3-9_2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

81. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP053472 (Staphylococcus warneri strain WB224 plasmid pWB224_2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

82. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP029661 (Staphylococcus aureus strain AR_0228 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

83. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_CP038169 (Enterococcus faecium strain SCBC1 plasmid pSCBC1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

84. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_016009 (Enterococcus faecium plasmid pM7M2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

85. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_MH784601 (Enterococcus faecium strain 25 plasmid pC25-1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

86. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_MH784602 (Enterococcus faecium strain 27 plasmid pC27-2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

87. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NZ_MK046687 (Staphylococcus epidermidis strain 107.2 plasmid pAQZ1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
aaaaatgacgttatttctatatgtatcaagataa	Protospacer
 ****   ..**.************** ******

88. spacer 3.10|1674435|34|NZ_CP011361|PILER-CR matches to NZ_CP053936 (Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.765

agtaaccaca-caaaaaagtgaataaacacgtaat	CRISPR spacer
-ataaatgtatcaaaaaagtgaataaaatcgtaat	Protospacer
 .*** ...* ****************  ******

89. spacer 3.10|1674435|34|NZ_CP011361|PILER-CR matches to NZ_CP053933 (Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

agtaaccaca-caaaaaagtgaataaacacgtaat	CRISPR spacer
-ataaatgtatcaaaaaagtgaataaaatcgtaat	Protospacer
 .*** ...* ****************  ******

90. spacer 3.10|1674435|34|NZ_CP011361|PILER-CR matches to NZ_CP009718 (Bacillus thuringiensis strain HD682 plasmid pBGN_2, complete sequence) position: , mismatch: 8, identity: 0.765

agtaaccaca-caaaaaagtgaataaacacgtaat	CRISPR spacer
-ataaatgtatcaaaaaagtgaataaaatcgtaat	Protospacer
 .*** ...* ****************  ******

91. spacer 3.12|1674569|33|NZ_CP011361|PILER-CR matches to NC_001764 (Bacillus subtilis plasmid pTA1040, complete sequence) position: , mismatch: 8, identity: 0.758

taaaaacttattgtttctatatgtatctagata	CRISPR spacer
gaaaatctcattgtttctatatgtatcaa----	Protospacer
 **** **.****************** *

92. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to NC_001764 (Bacillus subtilis plasmid pTA1040, complete sequence) position: , mismatch: 9, identity: 0.735

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
gaaaatctcattgtttctatatgtatcaa-----	Protospacer
 **** **.****************** *

93. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to HG796789 (Uncultured bacterium plasmid pRGF00031) position: , mismatch: 9, identity: 0.735

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
tgcaatgacgttatttctatatgtatcaagataa	Protospacer
*. **   ..**.************** ******

94. spacer 3.9|1674569|34|NZ_CP011361|CRISPRCasFinder,CRT matches to KX785321 (Streptococcus suis strain 6936 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

taaaaacttattgtttctatatgtatctagataa	CRISPR spacer
tcgccgtgagttatttctatatgtatcaagataa	Protospacer
* .  ..  .**.************** ******

95. spacer 2.1|632162|43|NZ_CP011361|CRISPRCasFinder matches to NZ_CP010110 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence) position: , mismatch: 12, identity: 0.721

aaatggaaaaggaaaagataaagataaagataaagaacacccg	CRISPR spacer
aggagaaaaaggaagcgataaagataaagataaagaaggaaaa	Protospacer
*.. *.********. ********************* .   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

383724 : 394389

Staphylococcus_phage(57.14%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008589411.1\|383724_385008_+	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	3.6e-29	25.4
WP_008589412.1\|385004_385721_+	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA
WP_008589414.1\|385795_387448_-	alpha-glucosidase	NA	NA	NA	NA
WP_008589416.1\|387977_389072_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	6.2e-62	36.8
WP_008589418.1\|389073_389715_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.6e-36	40.6
WP_008589420.1\|389731_390925_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.5e-117	53.9
WP_040609268.1\|390940_391405_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.3e-41	56.4
WP_008589424.1\|391406_392825_+	deoxyribodipyrimidine photo-lyase	A0A1V0SCV6	Indivirus	2.4e-58	28.9
WP_065757335.1\|393033_394389_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-85	41.0

DBSCAN-SWA_2

1271558 : 1281120

Bacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008587581.1\|1271558_1272236_-	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	3.2e-08	25.4
WP_008587582.1\|1272493_1272694_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.2e-19	67.7
WP_008587584.1\|1272959_1273808_+	DUF72 domain-containing protein	NA	NA	NA	NA
WP_008587586.1\|1273964_1274918_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	3.0e-113	61.3
WP_008587588.1\|1274928_1275417_+	dihydrofolate reductase	G3MBI7	Bacillus_virus	1.9e-42	48.8
WP_008587590.1\|1275547_1275730_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_040609097.1\|1275815_1276535_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	3.3e-11	26.0
WP_008587593.1\|1276622_1276844_+	hypothetical protein	NA	NA	NA	NA
WP_008587595.1\|1276852_1278001_+	exonuclease SbcCD subunit D	NA	NA	NA	NA
WP_008587596.1\|1278003_1281120_+	AAA family ATPase	G3MAB6	Bacillus_virus	1.4e-10	22.5

DBSCAN-SWA_3

2147337 : 2160523

Prochlorococcus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008588224.1\|2147337_2148870_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.1e-75	51.2
WP_008588222.1\|2148835_2149444_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	5.4e-23	33.9
WP_008588220.1\|2149440_2150448_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.7e-61	42.8
WP_008588218.1\|2150453_2151866_-	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	5.2e-53	30.9
WP_008588216.1\|2151841_2154067_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.0e-151	42.8
WP_008588214.1\|2154050_2154734_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_008588212.1\|2154734_2154980_-	phosphoribosylformylglycinamidine synthase subunit PurS	A0A1D7SNZ9	Cyanophage	2.0e-05	35.0
WP_008588210.1\|2154967_2155684_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SYW1	Cyanophage	4.0e-41	40.7
WP_008588208.1\|2155747_2157043_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.2e-17	23.7
WP_008588206.1\|2157055_2158168_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_008588204.1\|2158154_2158649_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.9e-19	41.7
WP_008588202.1\|2158934_2159135_-	NETI motif-containing protein	NA	NA	NA	NA
WP_008588200.1\|2159188_2160523_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.6e-43	31.8

DBSCAN-SWA_4

2221206 : 2277985

Bacillus_phage(18.18%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008588075.1\|2221206_2222358_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_082409500.1\|2223033_2224212_+	MFS transporter	NA	NA	NA	NA
WP_156330850.1\|2224342_2225416_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	6.0e-25	43.4
WP_008588066.1\|2225547_2227170_-	amidohydrolase	NA	NA	NA	NA
WP_008588064.1\|2227486_2228053_+	peroxiredoxin	NA	NA	NA	NA
WP_008588062.1\|2228068_2229631_+	alkyl hydroperoxide reductase subunit F	A0A1W6JNB4	Lactococcus_phage	5.8e-21	29.0
WP_052034733.1\|2229691_2229946_-	YrhK family protein	NA	NA	NA	NA
WP_040609138.1\|2230010_2230256_-	hypothetical protein	NA	NA	NA	NA
WP_008588056.1\|2230287_2231154_-	alpha/beta hydrolase	R4JP33	Mycobacterium_phage	1.0e-06	40.9
WP_008588053.1\|2231459_2232692_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_156330849.1\|2232722_2234450_+	AMP-binding protein	A0A2K9L3I8	Tupanvirus	6.9e-15	24.8
WP_008588049.1\|2234481_2234955_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_040609136.1\|2235063_2235411_-	DUF4440 domain-containing protein	NA	NA	NA	NA
WP_040609134.1\|2235503_2236031_-	hypothetical protein	NA	NA	NA	NA
WP_008588044.1\|2236188_2237412_+	DUF819 domain-containing protein	NA	NA	NA	NA
WP_008588042.1\|2237425_2237803_-	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_156330848.1\|2238114_2238276_-	hypothetical protein	NA	NA	NA	NA
WP_156330847.1\|2238651_2238819_-	hypothetical protein	NA	NA	NA	NA
WP_156330852.1\|2238997_2239453_-	hypothetical protein	NA	NA	NA	NA
WP_008588038.1\|2239632_2240151_-	GrpB family protein	A0A2K5B2B6	Erysipelothrix_phage	6.6e-46	56.0
WP_008588036.1\|2240281_2240677_+	DoxX family protein	NA	NA	NA	NA
WP_008588033.1\|2240851_2241409_-	6-phospho-3-hexuloisomerase	NA	NA	NA	NA
WP_008588031.1\|2241405_2242047_-	3-hexulose-6-phosphate synthase	NA	NA	NA	NA
WP_008588029.1\|2242208_2242865_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_008588027.1\|2243105_2244944_-	membrane protein	NA	NA	NA	NA
WP_008588026.1\|2245992_2246424_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_008588024.1\|2246560_2247787_+	MFS transporter	NA	NA	NA	NA
WP_008588022.1\|2247941_2248391_+	DUF1569 domain-containing protein	NA	NA	NA	NA
WP_008588019.1\|2248446_2248881_-	DUF4181 domain-containing protein	NA	NA	NA	NA
WP_008588017.1\|2249139_2250660_-	AbgT family transporter	NA	NA	NA	NA
WP_008588016.1\|2250892_2252272_-	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_169819464.1\|2252313_2253108_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_008588011.1\|2253475_2253856_+	hypothetical protein	NA	NA	NA	NA
WP_008588010.1\|2254025_2254445_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_008588008.1\|2254463_2254736_-	addiction module antidote protein	NA	NA	NA	NA
WP_008588006.1\|2255104_2255518_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_065757354.1\|2255964_2257320_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-85	41.0
WP_156330883.1\|2257640_2259004_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	3.5e-70	35.0
WP_008591688.1\|2259165_2259486_+	hypothetical protein	NA	NA	NA	NA
WP_008591686.1\|2259570_2259822_-	hypothetical protein	NA	NA	NA	NA
WP_008591684.1\|2260058_2262371_-	DEAD/DEAH box helicase family protein	E5EQY5	Bathycoccus_sp._RCC1105_virus	3.7e-32	31.2
WP_008591682.1\|2262626_2263217_-	zeta toxin family protein	NA	NA	NA	NA
WP_008591680.1\|2263206_2263416_-	hypothetical protein	NA	NA	NA	NA
WP_008591678.1\|2264343_2265009_-	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_008591676.1\|2265215_2266529_+	Ktr system potassium transporter B	NA	NA	NA	NA
WP_008591673.1\|2266782_2267418_-	peptidoglycan-binding protein	A0A0A0RV08	Bacillus_phage	6.0e-25	43.1
WP_008591671.1\|2267580_2268378_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_082409545.1\|2268430_2269183_-	EcsC family protein	NA	NA	NA	NA
WP_065757355.1\|2271292_2272483_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.3e-33	29.2
WP_008591791.1\|2272887_2274060_-\|transposase	transposase	NA	NA	NA	NA
WP_008591788.1\|2274225_2274687_+	hypothetical protein	NA	NA	NA	NA
WP_008591786.1\|2274806_2275181_+	hypothetical protein	NA	NA	NA	NA
WP_008591784.1\|2275552_2276245_+	hypothetical protein	NA	NA	NA	NA
WP_065757356.1\|2276251_2277985_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	4.3e-142	49.7

DBSCAN-SWA_5

2283726 : 2290999

Thermus_phage(28.57%)

integrase

attL 2288100:2288113|attR 2293172:2293185

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008590537.1\|2283726_2284428_-	N-acetylmuramoyl-L-alanine amidase	A0A0N6W8I1	Bacillus_phage	6.4e-52	47.5
WP_156330886.1\|2284441_2285224_-	ATP-binding protein	A8ATL1	Listeria_phage	2.0e-38	39.6
WP_008590543.1\|2285207_2285960_-	DnaD domain protein	A0A1L2JY26	Aeribacillus_phage	2.5e-38	39.3
WP_008590547.1\|2286206_2286491_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_008590549.1\|2286683_2287307_+	LexA family transcriptional regulator	A0A2R2ZGJ3	Clostridioides_phage	6.1e-06	45.2
WP_008590551.1\|2287381_2287840_+	Arm DNA-binding domain-containing protein	S6C485	Thermus_phage	1.0e-34	51.1
WP_008590553.1\|2287885_2288611_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	2.2e-31	36.9
2288100:2288113	attL	NA	NA	NA	NA
WP_008590554.1\|2290261_2290999_+\|integrase	site-specific integrase	S6C485	Thermus_phage	2.1e-82	63.1
WP_008590554.1\|2290261_2290999_+\|integrase	site-specific integrase	S6C485	Thermus_phage	2.1e-82	63.1
2293172:2293185	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2510652 : 2552917

Listeria_phage(26.47%)

head,plate,terminase,integrase,holin,transposase

attL 2506033:2506048|attR 2544572:2544587

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2506033:2506048	attL	NA	NA	NA	NA
WP_008592732.1\|2510652_2511699_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	8.6e-61	40.5
WP_073991992.1\|2511851_2512130_+\|integrase	tyrosine-type recombinase/integrase	H7BUU4	unidentified_phage	3.5e-14	43.3
WP_008592727.1\|2512492_2513542_-	2,3-butanediol dehydrogenase	NA	NA	NA	NA
WP_156330926.1\|2513978_2514431_-	hypothetical protein	NA	NA	NA	NA
WP_008592724.1\|2515099_2515549_-	hypothetical protein	NA	NA	NA	NA
WP_008592721.1\|2515545_2515959_-	hypothetical protein	NA	NA	NA	NA
WP_008592719.1\|2515986_2517063_-	hypothetical protein	NA	NA	NA	NA
WP_008592717.1\|2517182_2517449_-	hypothetical protein	NA	NA	NA	NA
WP_008592714.1\|2517561_2517702_-	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_008592713.1\|2517676_2519065_-	N-acetylmuramoyl-L-alanine amidase	A0A1S7FZ94	Listeria_phage	5.7e-12	53.6
WP_040609949.1\|2519086_2519380_-\|holin	holin	A0A0U4JE55	Bacillus_phage	2.5e-18	51.2
WP_008592709.1\|2519398_2519695_-	hypothetical protein	NA	NA	NA	NA
WP_008592707.1\|2519888_2520890_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A0N7ACM5	Bacillus_phage	1.8e-79	49.3
WP_008592706.1\|2520889_2521267_-	hypothetical protein	NA	NA	NA	NA
WP_008592704.1\|2521282_2521789_-	hypothetical protein	NA	NA	NA	NA
WP_008592702.1\|2521792_2522089_-	hypothetical protein	NA	NA	NA	NA
WP_008592699.1\|2522091_2522916_-	hypothetical protein	A0A2H4J4S3	uncultured_Caudovirales_phage	1.0e-16	42.6
WP_008592696.1\|2522912_2524079_-\|plate	baseplate J/gp47 family protein	E5DV64	Deep-sea_thermophilic_phage	4.9e-73	39.0
WP_008592694.1\|2524071_2524425_-	hypothetical protein	E5DV62	Deep-sea_thermophilic_phage	8.0e-11	34.5
WP_169819465.1\|2524424_2524754_-	hypothetical protein	A0A2D1GQ94	Lysinibacillus_phage	5.3e-17	41.9
WP_156874365.1\|2524813_2525554_-	hypothetical protein	E5DV61	Deep-sea_thermophilic_phage	1.9e-46	40.5
WP_008592688.1\|2525592_2525907_-	hypothetical protein	E5DV60	Deep-sea_thermophilic_phage	8.6e-25	57.0
WP_008592686.1\|2525917_2526493_-	LysM peptidoglycan-binding domain-containing protein	A0A1L2JY61	Aeribacillus_phage	5.1e-23	37.0
WP_169819466.1\|2526495_2529975_-	peptidoglycan DD-metalloendopeptidase family protein	A8ATH6	Listeria_phage	6.9e-30	38.3
WP_040609943.1\|2530258_2530519_-	hypothetical protein	D6PSY5	Lactobacillus_phage	1.3e-07	45.5
WP_008592680.1\|2530613_2531015_-	hypothetical protein	A0A1L2K2P1	Aeribacillus_phage	4.6e-23	44.3
WP_008592679.1\|2531048_2532068_-	DUF3383 family protein	A0A1L2JZ70	Aeribacillus_phage	9.8e-78	45.9
WP_008592676.1\|2532086_2532560_-	hypothetical protein	NA	NA	NA	NA
WP_008592673.1\|2532556_2532925_-	hypothetical protein	NA	NA	NA	NA
WP_008592671.1\|2532921_2533398_-	hypothetical protein	A8ATG9	Listeria_phage	8.2e-19	34.2
WP_008592669.1\|2533399_2533738_-	DUF4054 domain-containing protein	A8ATG8	Listeria_phage	2.0e-11	33.0
WP_008592668.1\|2533750_2534080_-	hypothetical protein	NA	NA	NA	NA
WP_008592666.1\|2534079_2534979_-	DUF2184 domain-containing protein	A8ATG6	Listeria_phage	3.6e-68	44.6
WP_008592664.1\|2535004_2535463_-	hypothetical protein	NA	NA	NA	NA
WP_040609941.1\|2535481_2536543_-	DUF2213 domain-containing protein	A8ATG4	Listeria_phage	1.7e-69	42.6
WP_008592660.1\|2536604_2536940_-	hypothetical protein	A0A2I7R5A8	Vibrio_phage	3.0e-23	56.2
WP_052034771.1\|2536954_2537731_-\|head	phage head morphogenesis protein	A8ATG2	Listeria_phage	4.7e-48	40.8
WP_052034775.1\|2537717_2539019_-	DUF1073 domain-containing protein	A8ATG1	Listeria_phage	1.2e-123	49.5
WP_156330930.1\|2539061_2540513_-\|terminase	phage terminase large subunit	A0A2H4J7G6	uncultured_Caudovirales_phage	2.9e-168	61.4
WP_156330929.1\|2540502_2540898_-\|terminase	terminase small subunit	S5MA50	Brevibacillus_phage	9.8e-18	40.4
WP_008592651.1\|2540975_2541650_-	hypothetical protein	NA	NA	NA	NA
WP_008592649.1\|2541941_2542367_-	hypothetical protein	A0A290FZR5	Caldibacillus_phage	1.6e-26	50.4
WP_008592648.1\|2542572_2543151_-	hypothetical protein	NA	NA	NA	NA
WP_008592646.1\|2543255_2543849_-	hypothetical protein	NA	NA	NA	NA
WP_008592644.1\|2543845_2544052_-	XtrA/YqaO family protein	A0A1L2JY31	Aeribacillus_phage	9.3e-12	55.9
WP_156330922.1\|2544133_2544280_-	hypothetical protein	NA	NA	NA	NA
WP_156330921.1\|2544296_2544473_-	hypothetical protein	NA	NA	NA	NA
WP_008592642.1\|2544477_2544675_-	hypothetical protein	NA	NA	NA	NA
2544572:2544587	attR	NA	NA	NA	NA
WP_008592640.1\|2544671_2545076_-	hypothetical protein	NA	NA	NA	NA
WP_008592638.1\|2545072_2545321_-	hypothetical protein	NA	NA	NA	NA
WP_008592636.1\|2545325_2545751_-	hypothetical protein	D2IZL0	Enterococcus_phage	4.3e-11	36.2
WP_008592635.1\|2545754_2546177_-	RusA family crossover junction endodeoxyribonuclease	S6B1L9	Thermus_phage	1.5e-32	50.0
WP_040609930.1\|2546189_2546702_-	dUTP diphosphatase	A6M995	Geobacillus_virus	4.7e-20	37.8
WP_008592631.1\|2546721_2547117_-	hypothetical protein	NA	NA	NA	NA
WP_008592629.1\|2547281_2547800_-	hypothetical protein	NA	NA	NA	NA
WP_008592628.1\|2547786_2548143_-	hypothetical protein	NA	NA	NA	NA
WP_008592626.1\|2548123_2548345_-	hypothetical protein	NA	NA	NA	NA
WP_008592623.1\|2548360_2548813_-	class I SAM-dependent methyltransferase	A8ATY8	Listeria_phage	4.4e-62	71.8
WP_156330920.1\|2548980_2549145_-	hypothetical protein	NA	NA	NA	NA
WP_008592621.1\|2549146_2550115_-	ATP-binding protein	S6B1M2	Thermus_phage	1.4e-65	47.0
WP_008592617.1\|2551085_2551967_-	recombination protein RecT	S6AVW6	Thermus_phage	9.3e-101	71.1
WP_008592615.1\|2551966_2552917_-	YqaJ viral recombinase family protein	S6C475	Thermus_phage	1.7e-92	57.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011361

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection