CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016171	Bordetella bronchialis strain AU17976, complete genome	2 crisprs	cas3,WYL,RT,DinG,csa3,DEDDh	0	0	6	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016171_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016171_1

1545629-1545720

Orphan

Consensus_repeat	Method
CAGCAGAACAACCAGAATCGGCAGCAGAACCAGCA	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_CP016171_1

>merge|NZ_CP016171|1|1545629-1545720|CRISPRCasFinder
CAGCAGAACCAGAACGAGCAGAATCGCAACCAGCAGAACCAGCAGAACAACCAGAATCGGCAGCAGAACCAGCAAAACAACCAGAACCGGCA

>NZ_CP016171|1|1|1545629-1545720|CRISPRCasFinder
CAGCAGAACCAGAACGAGCAGAATCGCAACCAGCA	GAACCAGCAGAACAACCAGAAT
CGGCAGCAGAACCAGCAAAACAACCAGAACCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016171.1\|WP_066668700.1\|1531229_1532114_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP016171.1\|WP_066668710.1\|1542266_1544570_+\|ATP-dependent-DNA-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_CP016171.1\|WP_066346044.1\|1551005_1551797_+\|gluconate-2-dehydrogenase-subunit-3-family-protein	unknown	unknown	gnl\|CDD\|379295
NZ_CP016171.1\|WP_066346054.1\|1555622_1555820_-\|DUF3606-domain-containing-protein	unknown	unknown	gnl\|CDD\|371985
NZ_CP016171.1\|WP_066346006.1\|1534752_1535331_+\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|226230
NZ_CP016171.1\|WP_066358332.1\|1551798_1553568_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP016171.1\|WP_066668714.1\|1547890_1548874_-\|chemotaxis-protein-CheB	unknown	unknown	gnl\|CDD\|319752
NZ_CP016171.1\|WP_066346037.1\|1549061_1549952_-\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|226076
NZ_CP016171.1\|WP_066345997.1\|1532118_1532982_-\|nitrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|130251
NZ_CP016171.1\|WP_066346051.1\|1554650_1555523_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293828
NZ_CP016171.1\|WP_066668712.1\|1545868_1547851_+\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP016171.1\|WP_156774022.1\|1540314_1542270_+\|VRR-NUC-domain-containing-protein	unknown	unknown	gnl\|CDD\|370112
NZ_CP016171.1\|WP_066358317.1\|1544616_1545411_-\|Sir2-family-NAD-dependent-protein-deacetylase	unknown	unknown	gnl\|CDD\|238697
NZ_CP016171.1\|WP_066346000.1\|1532953_1534252_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|372585
NZ_CP016171.1\|WP_066668715.1\|1558236_1558866_-\|cytochrome-C-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|239216
NZ_CP016171.1\|WP_066668702.1\|1535349_1536807_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NZ_CP016171.1\|WP_156774023.1\|1555886_1558172_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|378238
NZ_CP016171.1\|WP_066346015.1\|1538094_1538631_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP016171.1\|WP_066668705.1\|1538756_1539722_+\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
NZ_CP016171.1\|WP_066346041.1\|1550026_1550581_-\|ferritin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377580

Protein	Function_ID	Function_description	E-value
NZ_CP016171.1\|WP_066668700.1\|1531229_1532114_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	4.50143e-120
NZ_CP016171.1\|WP_066668710.1\|1542266_1544570_+\|ATP-dependent-DNA-helicase	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	4.44835e-62
NZ_CP016171.1\|WP_066346044.1\|1551005_1551797_+\|gluconate-2-dehydrogenase-subunit-3-family-protein	gnl\|CDD\|379295	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3. This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.	1.8045e-28
NZ_CP016171.1\|WP_066346054.1\|1555622_1555820_-\|DUF3606-domain-containing-protein	gnl\|CDD\|371985	pfam12244, DUF3606, Protein of unknown function (DUF3606). This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.	6.90999e-19
NZ_CP016171.1\|WP_066346006.1\|1534752_1535331_+\|ANTAR-domain-containing-protein	gnl\|CDD\|226230	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms].	1.31711e-42
NZ_CP016171.1\|WP_066358332.1\|1551798_1553568_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	4.39649e-69
NZ_CP016171.1\|WP_066668714.1\|1547890_1548874_-\|chemotaxis-protein-CheB	gnl\|CDD\|319752	cd16433, CheB, Chemotaxis response regulator protein-glutamate methylesterase, CheB. This family contains the methylesterase CheB (EC 3.1.1.61; also known as CheB methylesterase, chemotaxis-specific methylesterase, methyl-accepting chemotaxis protein methyl-esterase, or protein methyl-esterase) domain, a phosphorylation-activated response regulator involved in reversible modification of bacterial chemotaxis receptors. Signaling output of the chemotaxis receptors is modulated by CheB and methyltransferase CheR by controlling the level of receptor methylation. cheR and cheB have a strong preference to occur in the same operon, and a subgroup contains multidomain proteins with CheB-CheR fusions. Reversible methylation of transmembrane chemoreceptors plays an important role in ligand-dependent signaling and cellular adaptation in bacterial chemotaxis. Phosphorylated CheB catalyzes deamidation of specific glutamine residues in the cytoplasmic region of the chemoreceptors and demethylation of specific methyl glutamate residues introduced into the chemoreceptors by CheR.	7.44628e-93
NZ_CP016171.1\|WP_066346037.1\|1549061_1549952_-\|manganese-catalase-family-protein	gnl\|CDD\|226076	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism].	1.0556e-104
NZ_CP016171.1\|WP_066345997.1\|1532118_1532982_-\|nitrate-ABC-transporter-permease	gnl\|CDD\|130251	TIGR01183, Nitrate_transport_permease_protein_NrtB, nitrate ABC transporter, permease protein. This model describes the nitrate transport permease in bacteria. This is gene product of ntrB. The nitrate transport permease is the integral membrane component of the nitrate transport system and belongs to the ATP-binding cassette (ABC) superfamily. At least in photosynthetic bacteria nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA, ntrB, ntrC, ntrD, narB. Functionally ntrC and ntrD resemble the ATP binding components of the binding protein-dependent transport systems. Mutational studies have shown that ntrB and ntrC are mandatory for nitrate accumulation. Nitrate reductase is encoded by narB. [Transport and binding proteins, Anions].	2.6822e-72
NZ_CP016171.1\|WP_066346051.1\|1554650_1555523_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293828	cd07742, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	6.57978e-120
NZ_CP016171.1\|WP_066668712.1\|1545868_1547851_+\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.55032e-85
NZ_CP016171.1\|WP_156774022.1\|1540314_1542270_+\|VRR-NUC-domain-containing-protein	gnl\|CDD\|370112	pfam08774, VRR_NUC, VRR-NUC domain.	5.45463e-30
NZ_CP016171.1\|WP_066358317.1\|1544616_1545411_-\|Sir2-family-NAD-dependent-protein-deacetylase	gnl\|CDD\|238697	cd01406, SIR2-like, Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.	5.01791e-41
NZ_CP016171.1\|WP_066346000.1\|1532953_1534252_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|372585	pfam13379, NMT1_2, NMT1-like family. This family is closely related to the pfam09084 family.	7.63365e-126
NZ_CP016171.1\|WP_066668715.1\|1558236_1558866_-\|cytochrome-C-oxidase-subunit-III	gnl\|CDD\|239216	cd02865, Heme_Cu_Oxidase_III_2, Heme-copper oxidase subunit III subfamily. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which couple the reduction of molecular oxygen to water to, proton pumping across the membrane. The heme-copper oxidase superfamily is diverse in terms of electron donors, subunit composition, and heme types. This superfamily includes cytochrome c and ubiquinol oxidases. Bacterial oxidases typically contain 3 or 4 subunits in contrast to the 13 subunit bovine cytochrome c oxidase (CcO). Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunits I, II and III of ubiquinol oxidase are homologous to the corresponding subunits in CcO. Although not required for catalytic activity, subunit III is believed to play a role in assembly of the multimer complex. Rhodobacter CcO subunit III stabilizes the integrity of the binuclear center in subunit I. It has been proposed that Archaea acquired heme-copper oxidases through gene transfer from Gram-positive bacteria.	2.75969e-41
NZ_CP016171.1\|WP_066668702.1\|1535349_1536807_-\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	1.03853e-102
NZ_CP016171.1\|WP_156774023.1\|1555886_1558172_-\|c-type-cytochrome	gnl\|CDD\|378238	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). Members of this family are the CtaG protein required for assembly of active cytochrome c oxidase of the caa3 type, as found in Bacillus subtilis.	1.07508e-65
NZ_CP016171.1\|WP_066346015.1\|1538094_1538631_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.6426e-14
NZ_CP016171.1\|WP_066668705.1\|1538756_1539722_+\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	9.2557e-84
NZ_CP016171.1\|WP_066346041.1\|1550026_1550581_-\|ferritin-like-domain-containing-protein	gnl\|CDD\|377580	pfam05974, DUF892, Domain of unknown function (DUF892). This family consists of several hypothetical bacterial proteins of unknown function.	4.6677e-47

>NZ_CP016171.1|WP_066358317.1|1544616_1545411_-|Sir2-family-NAD-dependent-protein-deacetylase
MAELRQAYADGRLILFAGAGVSAGLGLPTAPEFAEWIARQLEQDPKAFCEYGDVQTLAEYYRLRLGAEQLHEWLLKEWNQRDVDVGASEIHRLIVQGRFHAIYTTNFDHWLEAAHEHHGRPYLKVTGVKDLAALAETDVRPIIKFHGDLDDPASLVLGESGYFERLGFDTPLDLRLRADLLVRPVLFIGYSISDINIRMLFWKLARLWESPRDVCHRPPSYLFWHQDNPVARAVLAQWGIRVVSSQEADPGQALLHFMRDLASS
>NZ_CP016171.1|WP_066668710.1|1542266_1544570_+|ATP-dependent-DNA-helicase
MTPPPAAHDYVVAVRTLCEFTARRGDLDLRFTPSPSAQEGVAGHSAVTARRGSDYETEIALSGSHGLLRVRGRADGYDARRNRLEEIKTHRGRVERIPENHRALHWAQAKVYGHLLCQARKLSEVDVALVYFDIGSQQETALVETCGADALRAFFIDHCERFLHWARQETAHRRARDSAMAALRFPHGEFRAGQRELATATFRAARDGHCVMAQAPTGIGKTMATVFPMLKACAGTLDKVFFLCAKTAGRQLALDALDRVRRDAPALPLRTLELVAREQACEHPGKACHGDSCPLARGFHDRLPQARETALAAYRMNRAAVRQAALAHGICPYFLGQELVRWSDVVVGDYNYYFDTSAMLYALTTANQWKVGLLVDEAHNMIERARRMYSVHLCLDELAAARRVAPAPLRKPLDALRRGWRELLKLQEEPYQVYERIPQSLISRMQQAVAALADHLAEQGGEAPENLLRFYFGLLAFLRLADAFGEHSLFDVTRDTGQGKAPAQGSLGIRNVVPAPFLAPRLAGAHGAVLFSATLNPMDFYQDTLGLPRDCRRLDVAGPFRAEQLSVHLVGGVSTRYRDRDASLPAIVEIMASAYRRQPGNYLCFASSFEYADRLAGHIQARHPDLPVWRQAAGMDADGRQAFLARFTPDGQGMGFAVLGGAFGEGVDLPGDRLIGAFIVTLGLPQVNPVNEHMMRRMQARFGNGYDYTYLYPGLQKVVQAAGRVIRTENDRGSVYLIDDRFCRAKVRALLPSWWRPRLLPRPTRES
>NZ_CP016171.1|WP_156774022.1|1540314_1542270_+|VRR-NUC-domain-containing-protein
MPATSLAQRPPSAPVLPPSTPAVPLSIPRVAVAAVPAALPRLPGPPADRRFYYLHNFQFALDWILARYDDLLDIEERDFIARFPLLPLAARALLVRLLMRKGPVFRMDGLVYAEIGCVRTAARPLLDLGWLDSDPVLTLDQVFHLLKRAELPGFFHAIAARMPARATKTSWMDGLRPLWPRAHRWSEWKRGGGLPSREGAWRGADGSDQEAATRTADLDDQAYEQAPASGYAAEKAREHAPAVFHSEDDTCDVVAVGIAGMVERFRLMFFGNLRQAWSEFVLADLGIFRYENVAFPLEARAFQAREDVDTYLRLHRQRESFESGEPWENVWTAVHAEAPANPWLARRRDKLLFALGRHCESRQAWPEAQRIYRSCGYPGTRHRLARVLERSGDHAGAMALAEQALLSPENEAETQLMQRLHARASRRLQAVRERTGPAWTSPPRTDLLLARPTPFLSVEHATREALSRPDAPVFYVENTLVTGLFGLLCWPAVFLPVAGAFFHPYQRGPADLHGPDFVESRRAAFQECLARLDDGTHAAAIMDVFHAKASIQSPFVSWHALDADLLRLALDCVPAAHMKRWFQRVLADIGNHCTGWPDLIQFWPGERRYALIEVKGPGDRLQDNQRRTLSYLLAHGIPAGVCHVAWRGADA
>NZ_CP016171.1|WP_066668705.1|1538756_1539722_+|GlxA-family-transcriptional-regulator
MASVAVVVFDGVQSLDVSGPLDVFAEANRLLPPEAAYELQTISIDGPAVTCTNSMSLTATAIWTRPDFKADILLVAGGRGLSTRQFDEAVYAWLRGACARARRYGSICNGALIFAKAGMLKGRTVTTHWDSVEALISTCPGCFVEPDRIYVQDGPLYTSAGVSAGIDLALHMLRQDQGAEIALSVAKRLVVVMQRTGGQSQFSPYLNAPADSASPVADAQRYVMANLRRPLTVSELAAVARMSVRSFSRAFAKEAGLTPAEFVQRARVDAARCLLENGDAPIKTIAYECGFGDAHRMRNAFLRSVGVSPQHYRMSFNQQGR
>NZ_CP016171.1|WP_066346015.1|1538094_1538631_+|carboxymuconolactone-decarboxylase-family-protein
MARLHTIALSEASGRAAELFATVKSAAGKVPNSYLGIGGNSPVALEAVLGLEAALKKSSLSPMDIEIVKLVVSRATGCDYCLAAHTLLGKKLGLSREAILAVRDARPSGDPRNDALATFTHHVITSRGIVAAEVLAAVKAAGVTDSQIVDAMLAIASITLTNLFNRVNDTVLDFPAAD
>NZ_CP016171.1|WP_066668702.1|1535349_1536807_-|cardiolipin-synthase
MRELHQILEAYWPHIVFTVSLVAGAGAAVHAAMTKNDVRAAIGWVGITLFSPLLGAAAYFVAGVNRIRITRVSQLRDDAMVAYAREPAAAEPDVVPLSAPQFASLKILADKVSHFQLLGGNSVQLLDGGDEAYPAMLQAIRQARYTVALQSYIFDNDPIGREMAQALIEARARGVQVRVLIDAVGSHYSRPPIVRTLKKGGVRTARFMTNPLGVLRMPYANLRSHRKILVVDGRVGFSGGMNIRAAFVSALARENTNRDTHFRFEGPVVTQLLSVFAHDWDFTTGESLAGSLWFNHAASAMAGNVAVRCVPSGPDRSLGSTHNMLLGALAVAQKHVRIQSPYFLPDQTLIGALATAARRGVRVDIVIPGKNNLRLVDYAMTAQLDQVIRWGCRVWRTTGMFDHSKLMTVDDAWSYAGSSNLDPRSLRLNFELDTEIYDRATAQAIGRRIDATIASAVPQTLDLLRGAPFLKRLRNKVIWLATPYL
>NZ_CP016171.1|WP_066346006.1|1534752_1535331_+|ANTAR-domain-containing-protein
MLRVMLIRDGEGRVAELRNTLEQGGVQIVAEVLPAADLSALIARHAPDVVLIDTDAPSRDTLEGVCVASAHGDRPVVMFTESNDRQTMRAALQAGVAAYVVGEVPASRIRSLLDVAIERYAVDRARREELTEARQRLAERQWVEKAKGLLMSLRGVSEEEAYRMLREHAMKSQRRIGEVARAMVEAAGWLKS
>NZ_CP016171.1|WP_066346000.1|1532953_1534252_-|ABC-transporter-substrate-binding-protein
MKLKTFPQHPTHAVAAAPADLQRRRVMRWATRTLAGASILGMVDPRVRAGAWAAGTDAPEKTEVKIGFIPLTDCSSVVMASVLGLDQKHGVKIVLSKEASWAGVRDKLINGELDAAHVLYGLVYGVHLGVGGPKKDMAVLMGLNQNGQAISLSQQLKDAGVTDGASLARVMAEKKREYTFAQTFPTGTHAMWLYYWLAASGINPMRDAKVITVPPPQMVANMRIGNMDGFCVGEPWNARAILDKVGFTAVTTQQIWQDHPEKVLGTSAEFVSRYPNTARAVTAAVLEASKWIDASPENRRKTAETVAAKSYVNTDVSVIVDRMLGRYDNGLGKTWDDAHPMRFYGDGAVNFPYLSDGMWFLTQHKRWGLLKDHPDYLAVARQINRIDVYKQAAAAVGAPLPAREMRASTLIDGVAWDGSNPAAYADGFKIKA
>NZ_CP016171.1|WP_066345997.1|1532118_1532982_-|nitrate-ABC-transporter-permease
MRTASRSKPEDTAMDRSLPLSGARPSWPWRDYVDGALRAVVGPAAGFALFVLVWQTIALLVPAIPTPAKTWDAAVVLFAHPFYDNGPNDRGIGWNVLASLLRVAGGFGLAALVGIPLGFAIGRFKALNALASPIISLLRPVSPLAWLPLGLLLFKAANPAAIWTIFICSIWPMILNTAAGVQRVPQDYLNVARVLDLSEWKVLTRVLLPAALPHVLTGVRLSIGTAWLVIVAAEMLTGGTGIGFWLWDEWNNLKVEHIVIAIFVIGIVGLTLDVLLMQLAKRFTYEE
>NZ_CP016171.1|WP_066668700.1|1531229_1532114_-|ABC-transporter-ATP-binding-protein
MEKFVRIESVGQVFETRKGPFVALRDIELTVAQGEFITLIGHSGCGKSTLLNLVAGLTRPTSGVLLCAEKEIAGPGPERAVVFQNHSLLPWLTCFQNVHLAVERVFGRRESKARQAERVHAALELVGLSHAQGKLPREISGGMKQRVGIARALAIEPKVLLMDEPFGALDALTRAHLQDELLKIVAKTRTTTMMVTHDVDEAVLLSDRVVMLTNGPAATIGQIQEVPLPRPRDRVALAEDPRYLACRAAVVDFLHRRYAHPAEASSRTAAPAPAAAPAFVAAAPLEPARARNAA
>NZ_CP016171.1|WP_066668712.1|1545868_1547851_+|S9-family-peptidase
MQKAFEVHDICLYRTITDLDCVRSTEIAACSVEAADEENDGTRTQIWLVPLDGGDPRQLTFGQSDSSPRWSPDGSRLAFLSNRGHGQQVYLIDPHGGEAMQLSRTASGVSSLEWAPDGRSLVVCCTLTVDPEIRGDHGKEQDTARGPDAPRVCWRLPYKLDGVGYTLDSEIHAYLLDAQTGEHKPLTEGAYQVNSIRFSPDSRRIAYTRTREGRLAHRTDMWLMNADGSGQRQTTSDLASVSYPKWSPDGRYIALTGSLQDGDAQMRLWIYDVERGCVEALGPDWIEVVSGQSVHWSLDGTSLVALLARNGRQEVVSVSVPDGRVATILGGDRHIARVACTARHLACVSQDAACPGEIWRADRDGLKETRVSDFNAWWSERLPPRVEMRRFIVPDGDRGTEEIDGWLLRPVDAKGPTPLLVDAHGGPASYALLDFNMHAYWYVLISRGWSVLALNPVGSSSYGRPFSSRLRENWGRYDLDQHLAAVETLRKEGIADERLAIAGKSYGGFLSAWAICNSTAFRAAVVCAPVTSLENHFGSSDSGYYADTYSMYGDAAVKRDAMRELSPMDYVENIRTPTLILQGEADDRCPKCQAEELFVGIMASTSTPAEMVLYPEATHHFLESGKPSRRMDAVTRLVGWVEKWIDVDVQPRKREEAPRS
>NZ_CP016171.1|WP_066668714.1|1547890_1548874_-|chemotaxis-protein-CheB
MSSYLTDRCIAIGASWGGVTAILRLVAELPADIPVPVFIVQHIGAHASQLDALIDRQGPNPAKFPAHGERIQAGTIYVAPPDRHMLVDKDTIMLDPGPKENHARPSIDPLFRSVALAYRERAAGVILTGMLDDGTAGLKAIKDCGGIAVVQDPADAEQADMPRSAIANVEVDHIVPLAGMGALLGTLAQSRPGGQTVNVPDHVRREHAMTLGQSIIENLTTIAHPSALTCPDCGGALFELNDTRPMRYRCHVGHAFTLESLANVQADTAEVFLWAALRSLTEKSLIIRRMAEALPHGDTAQAEQALREADRLSAVCEQLRGLVQKST
>NZ_CP016171.1|WP_066346037.1|1549061_1549952_-|manganese-catalase-family-protein
MFAHNKRLQYTVRVQSSNPGLANLLLEQFGGPQGELAAAMRYFTQYVAEEDPGRKDMLIDIATEELSHLEVIGTLVAMLNKGAKGQLAEAVDTEAELYRAVSGPGNDSHVTQVLYGGGPALINSGGQLWNAGYIDSIGDPSCDLRSNIAAEARAKIIYERLINVTDDPGVKDALTFLMTREVSHQRSFEKALYSMQPNFPPGKLPPDPRFANTYFNMSEGEGDTRGPWNSDENFEFVASASEAGPQDGDGMATVQLDADETTAVQGLMARTASDPQSNPRTGAELGAGNAEPGTTT
>NZ_CP016171.1|WP_066346041.1|1550026_1550581_-|ferritin-like-domain-containing-protein
MESTASTASTAATIDPDVLESHFMDWLRDAHAMEQQAETMLTAMAKRIESYPDLKLRIEKHIEETRNQAQLIAQCIERRGGDTSALKDLAGKAMAGMQGAAGMFASDEIVKGGMMSYAFEHFEIASYRNLIEAARMVGDRETMAICERILPEEQAMADWLAHNLAGVSRRFLELAQTPGAKAKV
>NZ_CP016171.1|WP_066346044.1|1551005_1551797_+|gluconate-2-dehydrogenase-subunit-3-family-protein
MIPSRRNFLKRAGLAAATVSAAPAVATAQTADDKAAAYIFLTPEEAAFVQAAVARLIPQDEAGPGALEAGVPNYIDKQLGGAWGAGERLYRGGPWKQGEPTQGYQLPFTPAELFRNACRALREELGKSGTPFDKRAPAEQDAFLRELQQSKRDLNGVPANVFFESLWGLTVEGFLSDPVYGGNKDMVSWKMIGFPGAHATYYHLVDQHGIAFNRAPMSLAEDNRGVIHIHPEVPASVGNAPTGNGTTPETMPGHAAGQSHGGR
>NZ_CP016171.1|WP_066358332.1|1551798_1553568_+|GMC-family-oxidoreductase
MATKLPETDAVLIGVGLVGTMLGRELTRAGLHVVGLERGEPRFTVPDFQGPYMHDELRYSVRKALMQDNTKEAVTFRNNSRQEALPIRRWESFLPGTGLGGAAVHWNGQTYRFQDTDFRMRSLTRERYGDKFMAEDLLVQDWGVDAATMEPYFDRFEYLLGVSGKAGNLKSGKVEGGNPFEDPRARDYPTPPMKEPYGSAMFRKAAAGLGLHPYPQPSANLSQPYTNPEGMTLNTCMFCGFCERYGCEHYAKSSPQTILLPVLLKDKNFELRTQCQVLRINVDSDGKRATGVTYVDAAGREFEQPANLVILGGFALNNVRMLLLSKIGQPYDPESGKGVVGRGYAYQTMSAVQVFYDASVNINPFMRSGACGTVVSDFVSDNFDHGPHGFVGGAYIGEIMTNGRPIEFHPTPVGTPPWGSEWKKAVIRHYNHTSVLNVHGSSVSCRANYLDLDPTYRDAWGLPLLRMTFDFHENDVKMSSFLTDRALEIGRAMGGKQVHGASRKGPYTVTQYQTTHNTGGTVMGDDRSTSVVNRYLQSWDLHNLFVIGASNFPQNASYNPTGTVGALAYWAADAIVSRYLKSPAPLVQA
>NZ_CP016171.1|WP_066346051.1|1554650_1555523_-|MBL-fold-metallo-hydrolase
MRIHHLNCISSCPLGGHLMDGRSDCLLCRGTLCCHCILIETPADGLVLIDTGFGLRDVRAPRTRLSAFFLALLKPDFKESMTAVRQIERLGYQARDVRHIVLTHLDFDHAGGLDDFPDASVHLSRPEREAAARQSTWLDRQRYRPQQWSSRRRWKEYAPTGDDWFGFQGTRPIEALHGEVALVPLHGHTLGHAGVAVRRGDGWLLQAGDAYFYHQELDHDRPRCTPGLRLYQWMMEKDRGARLHNQARLRELRHRHGGQIAVCCSHDPHEFDALRAGADAAGPLAQPAAG
>NZ_CP016171.1|WP_066346054.1|1555622_1555820_-|DUF3606-domain-containing-protein
MSDNLNDRGPRDRSRIALDEEWELRYWSKEFGCTPDELREAVKAAGSNAVDKVRAQLKAPARTAG
>NZ_CP016171.1|WP_156774023.1|1555886_1558172_-|c-type-cytochrome
MSPACLAVLAACFPLGAHAHVASADAAGLPDLQPVLEPWVVGTLLLSLFLYVAGYLRLRRHAAAGPDDEADAGVGASGNGASAPGASAPGASSDGASGDGARTRQRQLLAFLAGWATLCIALVSPLDALGPVLFSAHMVQHEMLMIVAAPLLVMSRPLAVWLWAFPRRWRRPIARAWRWRPLLRAWTLLTGALAAWMLHAVALWLWHVPRFFQAALADPTVHAWQHASFLASALLFWWPIFGASRRTAPGGYAMVSLFTTMVHTGALGALLTLAPGLWYPAYAEPAAALGVDALRDQQLGGLVMWVPGGLAYLIGGLYVGWRWLARPALSVSVMVLLAVPASMLPTRPAHAAGDDASSADAMLTARGRYVASAGDCFGCHTNPKGGAPYAGGRKLWSPFGTIVSTNITPDPRHGIGGYTYEEFARALRRGVARGGKPLYPAMPYASFARMTEDDLRALYAYMMHDVPAVDQSPPPTDLPFPFNQRWMLRGWQALFVPDEVYQPRPGRDAQWNRGAYLVQTLGHCGACHTPRGPAFQERGDDETSRHFLTGGVNDHWFAPNLNSGMGSGLGRMSVDELATFMKTGHANGNMAYGSMVETVETSLQHLTDEDLRAIAVYLKSLPPNADSGRYREDRAAAAEATPEQGNRTLDVESVGAAVYKNFCAQCHQANGMGIPGVYPRLAGNPSVLAQDKTSLMRIVMEGGRSAQTAHGPAPQHMPPFDTVLTEAQIAQVITYIRSSWGNDAPPASGAEVAQLRQALKK
>NZ_CP016171.1|WP_066668715.1|1558236_1558866_-|cytochrome-C-oxidase-subunit-III
MTHRHGEEVAVAAGTAIDVSGLPTYGFGHRSLMWWGTMGLMLIEGTVFAIGVMSYFYLRGLAPQWPIAADPPALAWGTANTVLLLASLWPNHLAKRAAERQQRARAALWVVVCVVLAAVFLALRALEFTALNVSWNENAYGALVWFLLGLHTTHLITDTVDTAVLAALLFTQRFDGRRYVDVSENAMYWYFVVFSWVPIYAVIYLAPRF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016171_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016171_2

5416501-5416607

Orphan

Consensus_repeat	Method
ACGCAGGCACCATCAAAGGAACGGCATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016171_2

>merge|NZ_CP016171|2|5416501-5416607|CRISPRCasFinder
ACGCAGGCACCATCAAAGGAACGGCATGAGCAAGACAACCAACGCAGGATCAAAGGAACGCCATGAGCAAGACAACCAACGCAGGCACCATCAAGGGAACGGCATGA

>NZ_CP016171|2|2|5416501-5416607|CRISPRCasFinder
ACGCAGGCACCATCAAAGGAACGGCATGA	GCAAGACAACCAACGCAGGATCAAAGGAACGCCATGAGCAAGACAACCA
ACGCAGGCACCATCAAGGGAACGGCATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016171.1\|WP_066672109.1\|5429758_5430502_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225706
NZ_CP016171.1\|WP_066356269.1\|5426416_5426902_-\|D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|131254
NZ_CP016171.1\|WP_066672099.1\|5411417_5412119_+\|urea-carboxylase-associated-family-protein	unknown	unknown	gnl\|CDD\|378156
NZ_CP016171.1\|WP_082988436.1\|5412127_5412730_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380339
NZ_CP016171.1\|WP_066356261.1\|5424087_5424876_+\|thiazole-synthase	unknown	unknown	gnl\|CDD\|234687
NZ_CP016171.1\|WP_066356251.1\|5407868_5408582_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP016171.1\|WP_066672106.1\|5424872_5425682_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
NZ_CP016171.1\|WP_066672096.1\|5410083_5411406_+\|M20-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349880
NZ_CP016171.1\|WP_066672110.1\|5430705_5431725_-\|Tim44-domain-containing-protein	unknown	unknown	gnl\|CDD\|214950
NZ_CP016171.1\|WP_066672108.1\|5428201_5429755_-\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	unknown	unknown	gnl\|CDD\|235310
NZ_CP016171.1\|WP_082988435.1\|5408581_5409223_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP016171.1\|WP_156770433.1\|5423050_5423965_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238564
NZ_CP016171.1\|WP_066672101.1\|5412732_5413686_+\|agmatinase	unknown	unknown	gnl\|CDD\|212538
NZ_CP016171.1\|WP_066356259.1\|5420928_5422866_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|226664
NZ_CP016171.1\|WP_066356266.1\|5425739_5426420_+\|protein-L-isoaspartate-O-methyltransferase	unknown	unknown	gnl\|CDD\|225316
NZ_CP016171.1\|WP_066359634.1\|5407028_5407859_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270343
NZ_CP016171.1\|WP_066672102.1\|5414527_5415775_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP016171.1\|WP_082988434.1\|5405775_5406759_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP016171.1\|WP_156774186.1\|5409296_5410097_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP016171.1\|WP_066672104.1\|5416742_5420525_-\|methionine-synthase	unknown	unknown	gnl\|CDD\|236539

Protein	Function_ID	Function_description	E-value
NZ_CP016171.1\|WP_066672109.1\|5429758_5430502_-\|hypothetical-protein	gnl\|CDD\|225706	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown].	4.24224e-17
NZ_CP016171.1\|WP_066356269.1\|5426416_5426902_-\|D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase	gnl\|CDD\|131254	TIGR02199, rfaE_dom_II, rfaE bifunctional protein, domain II. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.39454e-71
NZ_CP016171.1\|WP_066672099.1\|5411417_5412119_+\|urea-carboxylase-associated-family-protein	gnl\|CDD\|378156	pfam09347, DUF1989, Domain of unknown function (DUF1989). This family of proteins are functionally uncharacterized.	1.05527e-72
NZ_CP016171.1\|WP_082988436.1\|5412127_5412730_+\|cupin-domain-containing-protein	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.62362e-33
NZ_CP016171.1\|WP_066356261.1\|5424087_5424876_+\|thiazole-synthase	gnl\|CDD\|234687	PRK00208, thiG, thiazole synthase; Reviewed.	5.13717e-163
NZ_CP016171.1\|WP_066356251.1\|5407868_5408582_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.98452e-64
NZ_CP016171.1\|WP_066672106.1\|5424872_5425682_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	5.50883e-127
NZ_CP016171.1\|WP_066672096.1\|5410083_5411406_+\|M20-family-metallo-hydrolase	gnl\|CDD\|349880	cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase. Peptidase M20 family, beta-alanine synthase (bAS; N-carbamoyl-beta-alanine amidohydrolase and beta-ureidopropionase; EC 3.5.1.6) subfamily. bAS is an amidohydrolase and is the final enzyme in the pyrimidine catabolic pathway, which is involved in the regulation of the cellular pyrimidine pool. bAS catalyzes the irreversible hydrolysis of the N-carbamylated beta-amino acids to beta-alanine or aminoisobutyrate with the release of carbon dioxide and ammonia. Also included in this subfamily is allantoate amidohydrolase (allantoate deiminase), which catalyzes the conversion of allantoate to (S)-ureidoglycolate, one of the crucial alternate steps in purine metabolism. It is possible that these two enzymes arose from the same ancestral peptidase that evolved into two structurally related enzymes with distinct catalytic properties and biochemical roles within the cell. Downstream enzyme (S)-ureidoglycolate amidohydrolase (UAH) is homologous in structure and sequence with AAH and catalyzes the conversion of (S)-ureidoglycolate into glyoxylate, releasing two molecules of ammonia as by-products. Yeast requires beta-alanine as a precursor of pantothenate and coenzyme A biosynthesis, but generates it mostly via degradation of spermine. Disorders in pyrimidine degradation and beta-alanine metabolism caused by beta-ureidopropionase deficiency (UPB1 gene) in humans are normally associated with neurological disorders.	1.46024e-137
NZ_CP016171.1\|WP_066672110.1\|5430705_5431725_-\|Tim44-domain-containing-protein	gnl\|CDD\|214950	smart00978, Tim44, Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region.	9.27804e-28
NZ_CP016171.1\|WP_066672108.1\|5428201_5429755_-\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	gnl\|CDD\|235310	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed.	0
NZ_CP016171.1\|WP_082988435.1\|5408581_5409223_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.8956e-60
NZ_CP016171.1\|WP_156770433.1\|5423050_5423965_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238564	cd01144, BtuF, Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	3.87753e-76
NZ_CP016171.1\|WP_066672101.1\|5412732_5413686_+\|agmatinase	gnl\|CDD\|212538	cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase. This agmatinase subfamily contains bacterial and fungal/metazoan enzymes, including proclavaminic acid amidinohydrolase (PAH, EC 3.5.3.22) and Pseudomonas aeruginosa guanidinobutyrase (GbuA) and guanidinopropionase (GpuA). PAH hydrolyzes amidinoproclavaminate to yield proclavaminate and urea in clavulanic acid biosynthesis. Clavulanic acid is an effective inhibitor of beta-lactamases and is used in combination with amoxicillin to prevent the beta-lactam rings of the antibiotic from hydrolysis and, thus keeping the antibiotic biologically active. GbuA hydrolyzes 4-guanidinobutyrate (4-GB) into 4-aminobutyrate and urea while GpuA hydrolyzes 3-guanidinopropionate (3-GP) into beta-alanine and urea. Mutation studies show that significant variations in two active site loops in these two enzymes may be important for substrate specificity. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	1.95995e-151
NZ_CP016171.1\|WP_066356259.1\|5420928_5422866_+\|TonB-dependent-receptor	gnl\|CDD\|226664	COG4206, BtuB, Outer membrane cobalamin receptor protein [Coenzyme metabolism].	9.49815e-138
NZ_CP016171.1\|WP_066356266.1\|5425739_5426420_+\|protein-L-isoaspartate-O-methyltransferase	gnl\|CDD\|225316	COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones].	3.62924e-70
NZ_CP016171.1\|WP_066359634.1\|5407028_5407859_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270343	cd13625, PBP2_AA_binding_like_1, Substrate-binding domain of putative amino acid-binding protein; the type 2 periplasmic-binding protein fold. This putative amino acid-binding protein belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.25073e-89
NZ_CP016171.1\|WP_066672102.1\|5414527_5415775_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.68346e-138
NZ_CP016171.1\|WP_082988434.1\|5405775_5406759_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	2.43506e-17
NZ_CP016171.1\|WP_156774186.1\|5409296_5410097_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.04498e-128
NZ_CP016171.1\|WP_066672104.1\|5416742_5420525_-\|methionine-synthase	gnl\|CDD\|236539	PRK09490, metH, B12-dependent methionine synthase; Provisional.	0

>NZ_CP016171.1|WP_066672102.1|5414527_5415775_+|IS256-family-transposase
MATRKKNPPKELPAIPAGLVEQLVKGPMTAEAVQDLSMAFKKALIERALGAELGHHLGYAPGQRSETATNRRNGTSSKTVLTDDGAISVDVPRDRDGSFAPILIPKHERRFTGFDDKIIAMYARGMTVREIQAFLLEQYGTEVSPEFISSVTDAVVEEVTAWQTRPLETMYPVVFFDALRVKIREDGVVRNKAVYLALAILADGTRDVLGLWIEQTEGAKFWMKVFNELKTRGTQDILIAVTDGLKGMEQALNAVFPATTLQTCIVHLMRSSLDYASWKERRAVAAALRPIYSAPTVEAAQAELARFEQGLWGQRYAPIAQAWRSAWDRVIPFFTFPPAIRKIIYTTNAIESINAQLRRAVKTRGHFPSDEAATKLLWLVLRNITGTWGSSTHEWKAAMNQFAIIYAERFTNPYR
>NZ_CP016171.1|WP_066672101.1|5412732_5413686_+|agmatinase
MSLSATDTRAQALPRYSGIPTFMRVPHARRLEDFDIAIVGVPFDGGVTARPGARYGPREMRNMSSMTRAIHHVTGFNPFTACRVADVGDVPFTDVFHLENSHADIRRFLEPLYAAGKRTLVAGGDHSITFPIFQAMAPRPPLGMVHIDAHTDTWDDFIGSKFSHGSPFRRAVEAGLLDPRRTVQIGIRGAQNSDEGWRYSRETGMRVIFIEEFDRMGVDAAIAEARRVVGDGPAYLSVDVDGLDPVYAPGTGTPEIGGLSTRETLSLLRGLDGLDLLGADVVEVAPPYDPSGNTALLGATLMYECLCLLARGWIGRG
>NZ_CP016171.1|WP_082988436.1|5412127_5412730_+|cupin-domain-containing-protein
MAIRRSLPSTPERGLAALGPRVKHARMVHNLTLKALAEAAGCSESLLSRIERGQTMPSLATLHRLARALDTNVAELTAADAPPASPVTRAADRPVLAFSPARGRKGGVKLERVIVPMRGQLLQADIHVLAPLAESLEQIAHAGEEMGYVIEGRFELRLGSEIHQLDAGDSFYFSSDVPHSYRNPGKTVTRVLWVNTPTTF
>NZ_CP016171.1|WP_066672099.1|5411417_5412119_+|urea-carboxylase-associated-family-protein
MQTLSSTTQVADNGEPVGLNNTHLEPISPDGRAEPGKVYEVPARQGRAVRLSKGQVIRIINTHGSQVCDTWAFKADDLSEFMSMEHARAMIDRTIPKVGDPLGSNRRRPIMTLTADTSPGVHDTLMAACDAYRYRNLGVEHYHDNCADNMRMALKAIGLRAREVPQPLNLWMNIPVGPDAGVQWLAPVSKAGDYVDLRAEMDCVVVMSACPQDIIPINDNRPMEVHFQVLEQA
>NZ_CP016171.1|WP_066672096.1|5410083_5411406_+|M20-family-metallo-hydrolase
MHAADANDRVARAVEGGRLQARLEGLAAFGAAVPGTHRGGVARQALTAQELLARRWLAAAFGGRPGYAVGIDEAANVYIRRQGSDAGAPPVLTGSHADTQPLGGWLDGAYGVAAGLEVFDALDAAGVRTRRAIETVMWTNEEGSRFAPGLMGSVAYVSPGRLAEFRDARDARGVTFGQACADAREDFATAARTAGWQWFDTPLARPLHAYIEAHIEQGPIMEARGLQVGCVTAIQGVRWFRVTVPGRSAHAGTTPASARDDAQAKAIALAHALLDYGRAQEDERLRLTIGRWQCRPDSINTIADQVIFTVDTRHPDARVLDALQARLQALLPPGATVDTLQHKPTVAFDAGLVALARQACRALGLAHDDMVSGAFHDAMPLAGFCPTAMLFAPSIAGISHHPEEHTGIEDLTACTRALAWCLAELAGNADAAPALFTPPR
>NZ_CP016171.1|WP_156774186.1|5409296_5410097_+|ATP-binding-cassette-domain-containing-protein
MISLRGVGKSFGSHRVLAGIDLDIARGEVVTLIGPSGSGKTTLLRCMNFLDAYDEGEVHIRGALLGYRRNGAGALVRDSDRAVAEVRAPLAMVFQHFNLWPHMTVLANVMAPLTLARAKPAAQARQIALQALDRVGLADKAGMLPARLSGGQQQRVGIARALAVSPEAMLLDEPTSALDPELVDEVLAVIQSLSREGMTMVMVTHEMSFAAEVSDRIVFMEQGRILATGSAEEIIRRPSHPRIRSFLQPWIRRSLALPAGDDDARG
>NZ_CP016171.1|WP_082988435.1|5408581_5409223_+|amino-acid-ABC-transporter-permease
MDIDLLFTLLPQFGPGLLHTVGLVLAALAGGLLAGFIAHVLRETGWRPFTWFYWAYTVVWRGVPFLIHLFIVYFGLPSAGISLDPYAAAALTLSIYSGAYFAEIFRACWEAIPRGQVEAAQVMGLDRGQIFRHIQLPQALRAALPLIAHQTVLLVKESALASVITYPELTLTASRIVSEQFVYIEPYILLAACYWLLALAIGRLSRLLARRLA
>NZ_CP016171.1|WP_066356251.1|5407868_5408582_+|amino-acid-ABC-transporter-permease
MNDATLLERLAAYAPVLGNGAVMTLLVAAVAIVGGFLLGAVLLGLTLTGGRRSPLRLAVVAYISFFRGTPMLVQLLMLFYLPSALGVDLPPLLAAMAAMALNSAAFQCEILRGGLTAVGQGQLEAGAVFGLTPRQVFRHIQLPQMARAVWPAVVSEAIDVIKNSAIVSVIAVADLARAARQIVASNYRPLEVYVATGLVYLVLTAAVFLLGTWLARRMAGSRHASRAVIRRNAIRKT
>NZ_CP016171.1|WP_066359634.1|5407028_5407859_+|transporter-substrate-binding-domain-containing-protein
MLRSRLIMAVMAFAAAGAAHADLLDNIKQKKEIVIGTEAQFAPFEYLQDGKIVGYGPDLMNMIMSGLPGVKVKQLDVPFQGILPGLATRKFDFIVTSVTMTGERAAKFAFTVPIADATTALVKRKADTALASADGIAGKTVGSQTGSAQLKALQAYSDKLKAAGKPAVNIREYVSFDEAYADLAAGRLDAVAQSLANLATLVKTRGDVYAVIDGPIGPKTYFGWVGRKDADSASLVKFFSDGIARAQQTGELQKLQMKWFGFTMDVPTDKVPTPEM
>NZ_CP016171.1|WP_082988434.1|5405775_5406759_+|DMT-family-transporter
MPHEPTTAAGTGRAMNGGLLLALLLPPLLWGSNAIVGKMAAGLIPPVTLNTLRWLMALAVLLPFVLRRVARHRAAVRAEWRAIVIGGFWGITCYNALQYLALTTSNPINTSLIGSSAPVFILLLGRVLFGAPIGARSACGAALSVVGVAWVMLGGRLDGLDAIHFVRGDLFMLAGTCAWSLYTWLLKRHPTRLPTDVLLAAQIVAGLAWSVPFVLAEHAWGGYAPMAIDGKTAAIVAYIGIFPSLVAFFCWQTAVARTSPQLPIFFMNLTPIFTVLLSVLLLGVAPQPYHAVGLALILGGIFLARPRPAAGQPLAKHTAASPPRAPR
>NZ_CP016171.1|WP_066672104.1|5416742_5420525_-|methionine-synthase
MPVPSYPALPYPIDSYTHGAAFVRALASRILILDGAMGTMIQRYKLSEADFRGERFAGHGKDLKGDNELLSLTRPQVIAEIHRQYLEAGADVIETNTFGATSIAQGDYDLPELAYEMNVASARLAREACDAYSTPERPRFVAGALGPQPKTASISPDVNDPGARNVTFDELRDAYVEQLNGLLDGGIDIVLIETIFDTLNAKAAIFAVEEVFEQRGVRLPVMISGTVTDASGRILSGQTVEAFWNSVRHARPVTIGLNCALGAALMRPYVAELSKICDTYVCVYPNAGLPNPMSDTGFDESPDDTSGLLEEFARAGLVNMAGGCCGTTPDHIAAIARRVVNLTPRAVPEVPVKTRLSGLEPLNIDEDTLFVNVGERTNVTGSKMFARLIREEKYDEALAVARQQVENGAQIIDVNMDEAMLDSVACMTRFLNLIASEPDIARVPVMIDSSKWEVIEAGLKCVQGKAVVNSISMKEGIEPFLHHARLCRRYGAAMVVMAFDEQGQADTLERRKEICGRAYDLLVNQEGFNPEDIIFDPNVFAVATGIEEHNRYALDFIESVTWIRQNLPHARLSGGISNVSFSFRGNEPMREAIHTVFLYYAIREGLTMGIVNAGQLGVYADLDPKLRDLVEDVVLDRAQPLGKTDDADDRTPTERLVQFADTIKGSGAKKEEDLAWRAQPVEQRLAHALVHGITTFIVEDTEEVRQQIAARGGRPIEVIEGPLMDGMNIVGDLFGEGKMFLPQVVKSARVMKQAVAHLVPFIEEEKRQIAAAGGDVRAKGKMVIATVKGDVHDIGKNIVSVVLQCNNFEVVNMGVMVPCAQILEKAKQENADIIGLSGLITPSLEEMAYVASEMQRDEYFRERRVPLMIGGATTSRVHTAVKIAPNYEGPVVYTPDASRAVGVATNLVSDQAQAFIDDLKREYEDVRRRHANRKATPLIPLAEARAARPAIDWSAYVPPRPKYIGRRTFKHYDLAEIATYIDWTPFFQTWSLFGQFPAILDDKVVGEQARKVYADAQAMLKRIVEGRWLTANGVIAFYPANRVNDEDIEVYADDSRSRVLFTWRNLRQQGAKREGVSNKCLADYVAPKESGVADYIGLFAVTAGLGIEKKEAEFAAANDDYSSIMLKALADRLAEAYTECLHARVRRDLWGYAADESLDNNALIAEKYVGIRPAPGYPACPEHVVKREMFEVLDAADVGIDLTESYAMFPASSVCGFYLSHPDSQYFNVGTIGEDQLRDYIARSGRSEEDVRRTLGPVLG
>NZ_CP016171.1|WP_066356259.1|5420928_5422866_+|TonB-dependent-receptor
MKPLFTRRCAGLLACLAPVWAGAQQNPAASAAQPPVTQLDTVVVTATRSAEPLKEVLGDVSVIDHATLESAGQSSLAEVLSRTHGIEYANNGGPQTVTSLFMRGANSNQTLVLVDGQRINNATNGLAALNAIPVDTIDRVEIVRGAASSLYGADALGGVINIITKRATDRPLSAYASVGGGTYGTSRYSAGLSGASQGWTYSLASSYGQSRGFDATNGRNFLHNPDRDSYYENNVAGSLGYEWMRGQTLTAQFYQTHLNGGYDNGQPYFNDRSIQDLQGYSLTSTNRLTDMWTSTLRVGSTVDRNRNENAPADENPFDTPDGKSTFRTRQNQYLWQNDLQFTKDQKLTLAYEHLDQRVEGDIGNFNNFPVTFGDYSQTSRHVNSVTGVYLGDFGAHHIQASLRNDDNSQFGNRTTGGLTYGYDITDRIRATVGANTGFRAPNFNELYWPNDGGFVGNPDLKPETSRNIEASLRYRDDDSELGVTYYHNKVKNLIVNQAVDPNDPFSVFQPFNVSNALLEGVTLTGMKQFGNSRLRASVDLSDPRNTDEDTRLPQRARKVLRLSADHRFGDLLVGAEMYASGDRIDALTGDRLGGYTLYNLLASYDLTRNLQVQVRWNNVFDKEYALVKGYNTPGSNAFVNLTWRM
>NZ_CP016171.1|WP_156770433.1|5423050_5423965_+|ABC-transporter-substrate-binding-protein
MLAVTPRPAGAAPGDAGPGAATRAPGPISLQDDDSRTVTLAHPAMRAISLAPHATELIYAAGAGGRLVGVARGSDYPPAAGALPSVGDGLAPDPERVAALRPDLVIGWLPGGAAPLLPVLRALGVPLYYSDPRTLRDIPRAVEDMGTLFGTQAVAAPAAAALRARIDALAARYAGRRPVRVFVQAGREPLYTLNGTSIVSDALRLCGGVNVFADAPVTAPQVSAEAVLAARPDAVVAGSANPASLDATAAAWRALGLPAALAGHVVGIDADMLYRPGPRLIGATEKLCAALDAARQGAAAPPSR
>NZ_CP016171.1|WP_066356261.1|5424087_5424876_+|thiazole-synthase
MPSQDTFTVAGRDFRSRLLVGTGKYKDFVQTRQALDASGCEIVTVAIRRVNLGQNANEPSLLDFVPPSQFTYLPNTAGCYTADEAVRTLRLARELLDGHDLVKLEVLGDPHTLFPNMPETLKATEALVKDGFKVMVYCTDDPIQARMLEDLGAVAVMPLASLIGSGMGILNPWNLRLILDQARVPVLVDAGVGTASDAAIAMELGCDGVLMNTAIAGAKDPILMASAMKKAVEAGREAYLAGRMPKKLYSASPSSPTEGVVR
>NZ_CP016171.1|WP_066672106.1|5424872_5425682_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MIPNALSIAGVDPSGGAGVLADVKAMSALGAYGCAVIAALTAQNTEGVSQVSPVPPAFVGQQIDTLFADVRIDAVKLGMLGQQAVIQVVAEKLARWRPPHVVLDPVMVAKSGDLLLERAAVGALREALLPQATVLTPNLPEAGVLLEERPVETVKEMRRVAERLRNRMAYDGHRWIMLKGGHLPGEETIDLLHDGDRMIELPGGRIATRNTHGTGCTLSAALAALIPQVGEVPEAARRAKAYLTEAIRHADRLDVGKGHGPVHHFHAWW
>NZ_CP016171.1|WP_066356266.1|5425739_5426420_+|protein-L-isoaspartate-O-methyltransferase
MNASTLPDVEKARFNMVEQQVRPWDVLDEKVLAALFKVRREQFVPPALRSLAFSDLEIPLQINAVDTRETMLAPKIEARFAQELRLAPTDAVLEIGTGSGYQAALLGALAQQVTSVEIDSRLVAFAQQNLQMNNVANVKVETGDGRNGWGTTEYDAILLTGSVPVVPDGLKYQLRIGGRLVVVVGTAPVMTACRITRTTAASFETVQLFETVIKPLRGATVSQFKF
>NZ_CP016171.1|WP_066356269.1|5426416_5426902_-|D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase
MTARFESKILTPGQCLDALAGGRLPRPLVFTNGVFDILHRGHVTYLDESAQLGASLIVAVNTDASARRLGKGPERPLNSQEDRAALLAALACVDAVTAFDEDTPEALIGLLRPDIIVKGGDYDMEKLPETALVRSWGGRAVAVPFEHQRSTTALVRKIQGG
>NZ_CP016171.1|WP_066672108.1|5428201_5429755_-|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB
MLTFFRFVRIVVVALRYGLDELVLSSLNHPLATLLLRVMRFGTRPRSPRGVRLRRALESLGPIFVKFGQVLSTRRDLIPADIAAELALLQDRVPPFPSEQAAQCIEAALGAPPATLFKHFEVDPVASASIAQVHFAVLHDGREVAVKVLRPGMLDIIEKDLTLLRTLASVIERLGPDGRRLKPREVVAEFDKYLHDELDLVREASNCSQLRRNFGPESGRGRMLIVPEVIWEFTANTVFTMERMYGIPVGQIDRLRAAGIDIHSLARTGVEIFFTQVFSDGFFHADMHPGNIYVSDRPETLGHYIALDFGIVGSLSEFDKNYLAQNFLAFFRRDYRRVAQLHIESGWVPADTREEELEGAVRAVCEPYFDRPLSEISLGQVLLRLFQTSRRFNVEIQPQLVLLQKTLLNVEGLGRELDPDLDLWKTAKPYLERWMRERIGMAGLKKQLEKEAGQWSQLLPAIPRLVHDRLNRPNVEPAMLLELARLRKAQEHTNRLLSVVAAVLAVGVALVIWFSTR
>NZ_CP016171.1|WP_066672109.1|5429758_5430502_-|hypothetical-protein
MLAIPALPDPGRAAVRALNALLRREDWARARLARHAGKTVRLAGGALKLSLTIDSEGYTDLADPAVVPDVTLTADPSRFRLARLFQAGAENGPAGVARPGMDDREGSDPAASARARAEAIADMTHIAGDAGLAQVVAELAAQLRWDVEDDLARWLGDIPAARLVAGARAVSAGLRGAAARLGGNLAEYLSQERPILAPRTLMGNWADDIARANAALDAAHARATALQARLARVQDRQDAAARGNGGA
>NZ_CP016171.1|WP_066672110.1|5430705_5431725_-|Tim44-domain-containing-protein
MSRCSYRRILAAALIAVTGAAMIATSFDAEARRMGGGSSVGRQSPNVTMQRQATTPPATGATTPGAASAAAPAAAGAATAGAATRSGASRWLGPIAGIAAGLGLAALLSHLGLSGAFAEMLASLLLIALVVFAVLFIIRRLRGSGPRPAMQGAYGMARQADTPAQAPTPWREALPAAGTAGAATAAGAASAAAPVAAEPAAAPRQDAQGNWFIPGDFDTQGFLKQAKEQFVRIQGVWDSGDTERLREYLTDDLIVELKPQLTERKGAANHTEVVLLNAEMLGIEAVSDGHLASVRFSGMLREEPGAEAFRFEEVWNLFKPTQGGWLLAGIQQIPVQYAS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1128727 : 1136425

Mollivirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066345133.1\|1128727_1129609_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	6.8e-51	37.3
WP_066345135.1\|1129998_1130574_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_066345137.1\|1130731_1131259_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.6e-15	41.2
WP_066358108.1\|1131357_1132524_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_066345139.1\|1132589_1133633_+	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.6e-43	38.9
WP_066345141.1\|1133892_1134915_+	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.2e-67	41.1
WP_066668379.1\|1134926_1135643_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.5e-11	24.3
WP_066668381.1\|1135639_1136425_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	7.2e-12	28.3

DBSCAN-SWA_2

1243351 : 1299075

Burkholderia_phage(11.54%)

terminase,tail,plate,tRNA,portal,integrase,capsid,head

attL 1239948:1239965|attR 1260782:1260799

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1239948:1239965	attL	NA	NA	NA	NA
WP_066668432.1\|1243351_1244107_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_156774154.1\|1244103_1244682_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_066668437.1\|1244689_1245334_-	DUF2946 family protein	NA	NA	NA	NA
WP_082987992.1\|1245350_1246406_-	aldose 1-epimerase	NA	NA	NA	NA
WP_066668439.1\|1246385_1246796_+	hypothetical protein	NA	NA	NA	NA
WP_066672583.1\|1247020_1247824_-	hypothetical protein	A0A0G2Y3F6	Acanthamoeba_polyphaga_mimivirus	8.1e-19	36.5
WP_066668441.1\|1248148_1250164_+	metallophosphatase	NA	NA	NA	NA
WP_066668443.1\|1250205_1252491_+	phosphoesterase	NA	NA	NA	NA
WP_082987995.1\|1252568_1254041_+	cytochrome-c peroxidase	NA	NA	NA	NA
WP_066345389.1\|1254051_1254432_+	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	9.8e-15	42.9
WP_066668445.1\|1254677_1255748_-\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	4.6e-86	49.7
WP_082987996.1\|1255749_1256001_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_066668447.1\|1256130_1256520_-	hypothetical protein	NA	NA	NA	NA
WP_156774005.1\|1256507_1256723_-	hypothetical protein	NA	NA	NA	NA
WP_066668450.1\|1256760_1257183_-	HNH endonuclease	Q3HQV7	Burkholderia_phage	2.4e-38	57.0
WP_156774006.1\|1257179_1257695_-	hypothetical protein	NA	NA	NA	NA
WP_066668453.1\|1257687_1258050_-	hypothetical protein	NA	NA	NA	NA
WP_066668457.1\|1258663_1260544_-	type II restriction endonuclease subunit M	H9C171	Pectobacterium_phage	1.4e-149	43.9
WP_066672587.1\|1260540_1261014_-	methyltransferase	A0A0N7IRF6	Acinetobacter_phage	1.0e-61	66.9
1260782:1260799	attR	NA	NA	NA	NA
WP_156774007.1\|1261084_1261246_-	hypothetical protein	NA	NA	NA	NA
WP_066668459.1\|1261268_1262162_-	recombination-associated protein RdgC	A0A218M310	Acidovorax_phage	3.6e-52	38.0
WP_066668461.1\|1262109_1263282_-	RNA-directed DNA polymerase	A0A0N7AE80	Bacillus_phage	9.3e-48	34.7
WP_066668463.1\|1263443_1263905_-	four helix bundle protein	NA	NA	NA	NA
WP_066668464.1\|1263934_1264363_-	DUF1566 domain-containing protein	NA	NA	NA	NA
WP_082987997.1\|1264408_1264981_-	DUF1566 domain-containing protein	NA	NA	NA	NA
WP_066668465.1\|1265047_1265545_-	single-stranded DNA-binding protein	I6NRL7	Burkholderia_virus	1.0e-40	57.2
WP_156774008.1\|1265560_1265734_-	hypothetical protein	NA	NA	NA	NA
WP_066668466.1\|1265738_1265936_-	hypothetical protein	NA	NA	NA	NA
WP_066668467.1\|1266564_1267179_-	hypothetical protein	NA	NA	NA	NA
WP_156774009.1\|1267194_1267374_-	hypothetical protein	NA	NA	NA	NA
WP_066668468.1\|1267409_1267595_-	hypothetical protein	A0A2I7RA41	Vibrio_phage	2.0e-05	45.8
WP_066668470.1\|1267599_1267785_-	hypothetical protein	NA	NA	NA	NA
WP_066668471.1\|1268319_1268535_-	hypothetical protein	NA	NA	NA	NA
WP_156774010.1\|1268998_1269457_-	hypothetical protein	NA	NA	NA	NA
WP_082987999.1\|1269455_1269713_+	hypothetical protein	NA	NA	NA	NA
WP_066668475.1\|1270558_1270867_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_156774011.1\|1271243_1271417_+	hypothetical protein	NA	NA	NA	NA
WP_082988001.1\|1271413_1271953_+	hypothetical protein	NA	NA	NA	NA
WP_082988002.1\|1271961_1272987_+	helix-turn-helix domain-containing protein	A0A0U4IBP5	Pseudomonas_phage	1.6e-14	53.2
WP_066672591.1\|1272973_1273705_+	AAA family ATPase	A0A067ZJ24	Vibrio_phage	1.8e-41	39.8
WP_066672592.1\|1273809_1274136_+	hypothetical protein	R9TNL4	Vibrio_phage	4.8e-18	46.3
WP_156774155.1\|1274632_1274815_+	hypothetical protein	NA	NA	NA	NA
WP_156774012.1\|1274956_1275163_+	hypothetical protein	NA	NA	NA	NA
WP_066668483.1\|1275150_1275837_+	hypothetical protein	NA	NA	NA	NA
WP_066668484.1\|1275969_1276560_+	hypothetical protein	NA	NA	NA	NA
WP_066668486.1\|1276537_1278529_+\|terminase	phage terminase large subunit family protein	G8EXZ6	Synechococcus_phage	9.7e-146	48.1
WP_066668488.1\|1278538_1278787_+\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_066668490.1\|1278855_1280418_+\|portal	phage portal protein	A0A286MNI7	Klebsiella_phage	1.2e-71	32.7
WP_066668492.1\|1280417_1281305_+	S49 family peptidase	G8DCP1	Silicibacter_phage	5.1e-46	55.9
WP_066668493.1\|1281326_1281872_+	hypothetical protein	NA	NA	NA	NA
WP_066668495.1\|1281902_1282583_+\|head	head decoration protein	NA	NA	NA	NA
WP_066668497.1\|1282666_1283725_+\|capsid	major capsid protein	V5Q8G6	Xylella_phage	5.3e-50	33.5
WP_066668502.1\|1283724_1283979_+	hypothetical protein	NA	NA	NA	NA
WP_066668504.1\|1283980_1284304_+	hypothetical protein	NA	NA	NA	NA
WP_066668506.1\|1284300_1284852_+	hypothetical protein	NA	NA	NA	NA
WP_066668508.1\|1284861_1285080_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_066668512.1\|1285080_1286607_+\|tail	phage tail protein	S5FKL0	Shigella_phage	1.1e-93	41.9
WP_066668517.1\|1286668_1287037_+\|tail	phage tail protein	NA	NA	NA	NA
WP_066668518.1\|1287038_1287392_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_156774013.1\|1287418_1287538_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_066668519.1\|1287530_1289546_+	hypothetical protein	K7PM62	Enterobacteria_phage	4.3e-08	26.3
WP_066668524.1\|1289542_1290970_+	hypothetical protein	U5P4I0	Shigella_phage	1.0e-16	36.5
WP_066668526.1\|1290969_1292085_+	hypothetical protein	A0A2P9JZK3	Alteromonadaceae_phage	4.9e-22	29.2
WP_066668528.1\|1292088_1292703_+\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_066668530.1\|1292699_1293152_+	hypothetical protein	U5P0R9	Shigella_phage	2.6e-14	38.1
WP_066668532.1\|1293153_1294317_+\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	2.0e-26	31.7
WP_066668534.1\|1294324_1294915_+	DUF2313 domain-containing protein	A0A2P9JZK7	Alteromonadaceae_phage	8.1e-24	35.1
WP_156774014.1\|1294920_1296066_+	hypothetical protein	Q8HAM8	Burkholderia_phage	1.6e-15	41.8
WP_066668538.1\|1296075_1296270_+	hypothetical protein	NA	NA	NA	NA
WP_156774015.1\|1296247_1298308_-	hypothetical protein	NA	NA	NA	NA
WP_156774016.1\|1298320_1298620_+	hypothetical protein	NA	NA	NA	NA
WP_066668545.1\|1298616_1299075_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	A0A0K2CP65	Brevibacillus_phage	7.4e-25	43.5

DBSCAN-SWA_3

1937041 : 1944448

Bacteriophage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066347042.1\|1937041_1939633_+	ATP-dependent chaperone ClpB	A0A223W0B1	Agrobacterium_phage	3.0e-123	33.2
WP_066668944.1\|1939644_1940586_-	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	1.7e-15	56.3
WP_066668946.1\|1940680_1941550_-	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	1.3e-14	60.3
WP_156774033.1\|1941638_1942646_-	hypothetical protein	B6SD27	Bacteriophage	6.8e-15	61.9
WP_066668950.1\|1942620_1943586_-	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	1.3e-15	37.8
WP_082988076.1\|1943590_1944448_-	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	2.2e-14	46.7

DBSCAN-SWA_4

2062888 : 2102782

Burkholderia_phage(25.0%)

protease,terminase,tail,portal,integrase,capsid,head

attL 2060429:2060444|attR 2064890:2064905

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2060429:2060444	attL	NA	NA	NA	NA
WP_066669012.1\|2062888_2063863_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J8E5	uncultured_Caudovirales_phage	2.7e-64	43.0
WP_082988087.1\|2063789_2064020_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_066669014.1\|2064016_2064250_-	hypothetical protein	NA	NA	NA	NA
WP_156774035.1\|2064242_2064650_-	hypothetical protein	NA	NA	NA	NA
WP_156774036.1\|2064636_2064843_-	hypothetical protein	NA	NA	NA	NA
WP_066669029.1\|2064835_2065795_-	hypothetical protein	NA	NA	NA	NA
2064890:2064905	attR	NA	NA	NA	NA
WP_066669031.1\|2065791_2066265_-	class I SAM-dependent methyltransferase	A0A0N7IRF6	Acinetobacter_phage	2.5e-60	66.2
WP_066347486.1\|2066396_2066642_+	hypothetical protein	NA	NA	NA	NA
WP_156774037.1\|2066712_2067336_+	hypothetical protein	NA	NA	NA	NA
WP_066669035.1\|2067373_2067754_-	hypothetical protein	NA	NA	NA	NA
WP_156774038.1\|2067763_2067958_-	hypothetical protein	NA	NA	NA	NA
WP_066669038.1\|2067896_2069570_-	DEAD/DEAH box helicase	A0A0R6PK36	Moraxella_phage	2.2e-87	36.9
WP_156774039.1\|2069566_2070619_-	oxidoreductase	A0A173H0P7	Pseudoalteromonas_phage	8.0e-75	43.0
WP_066669040.1\|2070621_2071092_-	DUF669 domain-containing protein	A0A2I7S8Y3	Vibrio_phage	2.1e-27	49.6
WP_066669042.1\|2071105_2071912_-	ATP-binding protein	A0A1B1INN1	uncultured_Mediterranean_phage	3.5e-46	42.1
WP_066347501.1\|2071913_2072288_-	hypothetical protein	NA	NA	NA	NA
WP_156770192.1\|2072291_2072429_-	hypothetical protein	NA	NA	NA	NA
WP_066669044.1\|2072531_2072849_-	hypothetical protein	NA	NA	NA	NA
WP_156774040.1\|2072962_2073109_-	hypothetical protein	NA	NA	NA	NA
WP_066669046.1\|2073285_2073546_+	hypothetical protein	NA	NA	NA	NA
WP_082988088.1\|2073990_2074227_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_156774041.1\|2074277_2074643_-	hypothetical protein	NA	NA	NA	NA
WP_066669049.1\|2074639_2074879_-	hypothetical protein	NA	NA	NA	NA
WP_066669051.1\|2074879_2075629_-	helix-turn-helix transcriptional regulator	A0A0A0YR73	Pseudomonas_phage	1.6e-16	30.4
WP_066669053.1\|2075712_2075934_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_156774042.1\|2076005_2076224_-	hypothetical protein	NA	NA	NA	NA
WP_156774043.1\|2076315_2076813_+	hypothetical protein	Q3HQZ3	Burkholderia_phage	3.6e-25	45.2
WP_066669056.1\|2076838_2079121_+	DUF3987 domain-containing protein	M4R151	Loktanella_phage	1.5e-81	35.8
WP_082988089.1\|2079412_2079832_+	VRR-NUC domain-containing protein	H7BUL6	unidentified_phage	1.1e-19	42.5
WP_066669057.1\|2079828_2080404_+	hypothetical protein	NA	NA	NA	NA
WP_066669060.1\|2080731_2080929_+	hypothetical protein	NA	NA	NA	NA
WP_066669062.1\|2080913_2081261_+	HNH endonuclease	NA	NA	NA	NA
WP_066347553.1\|2081359_2081668_+	hypothetical protein	Q3HQS6	Burkholderia_phage	3.0e-14	50.0
WP_066669064.1\|2081671_2083348_+\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	2.2e-239	72.1
WP_066669067.1\|2083356_2084622_+\|portal	phage portal protein	Q3HQS8	Burkholderia_phage	3.4e-144	60.5
WP_066669069.1\|2084587_2085454_+\|protease	Clp protease ClpP	Q3HQS9	Burkholderia_phage	8.6e-107	73.6
WP_066347565.1\|2085458_2086736_+\|capsid	phage major capsid protein	Q3HQT0	Burkholderia_phage	1.5e-168	71.9
WP_066347570.1\|2086811_2086997_+	hypothetical protein	Q3HQT1	Burkholderia_phage	1.2e-07	51.9
WP_066347573.1\|2086999_2087479_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	2.8e-06	57.4
WP_066669071.1\|2087475_2087826_+\|head	phage head closure protein	Q7Y5K6	Xanthomonas_virus	3.7e-16	40.3
WP_066669073.1\|2087818_2088310_+	hypothetical protein	Q7Y5K5	Xanthomonas_virus	9.3e-26	48.4
WP_066669075.1\|2088299_2088653_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_066347584.1\|2088705_2089362_+	hypothetical protein	A0A0H5BBY3	Pseudomonas_phage	5.8e-39	44.5
WP_066347587.1\|2089358_2089670_+	hypothetical protein	Q7Y5K2	Xanthomonas_virus	1.6e-07	34.0
WP_066669078.1\|2089678_2089972_+	hypothetical protein	NA	NA	NA	NA
WP_066669080.1\|2089973_2092802_+\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	2.4e-121	34.5
WP_066669081.1\|2092807_2093158_+	hypothetical protein	NA	NA	NA	NA
WP_066669082.1\|2093154_2093631_+	DUF1833 domain-containing protein	I7GYA2	Xanthomonas_virus	3.7e-11	30.8
WP_066669083.1\|2093691_2094330_+	hypothetical protein	NA	NA	NA	NA
WP_082988090.1\|2094323_2094641_-	Arc family DNA-binding protein	A0A0U4B0M9	Pseudomonas_phage	6.3e-07	39.7
WP_156774044.1\|2094766_2094952_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_066669086.1\|2094980_2095409_+	hypothetical protein	NA	NA	NA	NA
WP_066669088.1\|2095405_2096074_+	ORF6N domain-containing protein	A0A2L1IV98	Escherichia_phage	5.7e-34	57.5
WP_066669090.1\|2096130_2096514_+	hypothetical protein	NA	NA	NA	NA
WP_066672666.1\|2096519_2100383_+	hypothetical protein	Q52PQ3	Xanthomonas_phage	1.1e-47	28.4
WP_066669092.1\|2100385_2101132_+	hypothetical protein	NA	NA	NA	NA
WP_066669093.1\|2101139_2101688_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_066669094.1\|2101735_2102074_+	hypothetical protein	NA	NA	NA	NA
WP_066669095.1\|2102070_2102301_+	hypothetical protein	A0A2P9HXL2	Yersinia_phage	1.7e-06	43.8
WP_066669096.1\|2102281_2102782_+	glycoside hydrolase family 104 protein	Q9MC90	Pseudomonas_phage	1.8e-37	55.2

DBSCAN-SWA_5

3429526 : 3442248

Bacteriophage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066670207.1\|3429526_3431203_-	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	2.3e-84	35.3
WP_066350816.1\|3431362_3432781_+	argininosuccinate lyase	NA	NA	NA	NA
WP_082988254.1\|3433086_3434001_+	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	9.0e-22	67.6
WP_082988255.1\|3434054_3435011_+	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	3.6e-21	65.2
WP_066670215.1\|3435059_3435971_+	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	7.1e-19	64.2
WP_082988256.1\|3436025_3436955_+	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	1.9e-19	64.2
WP_082988257.1\|3436918_3437920_+	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	8.9e-23	71.6
WP_082988258.1\|3437967_3438879_+	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	2.6e-21	70.1
WP_066670228.1\|3439948_3440872_+	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_066670231.1\|3440922_3442248_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	2.6e-30	26.7

DBSCAN-SWA_6

4964153 : 5023134

Bacillus_phage(66.67%)

plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066355223.1\|4964153_4964573_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_066671706.1\|4964602_4966327_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_066671709.1\|4966290_4967355_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_066355234.1\|4967351_4970147_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.2e-87	28.0
WP_066355238.1\|4970149_4972609_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_066355240.1\|4972624_4975069_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_066355242.1\|4975073_4977701_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_066355246.1\|4977693_4978644_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_082988391.1\|4978662_4979370_+	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_066355250.1\|4979383_4979788_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_066355253.1\|4979799_4980498_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_066355257.1\|4980518_4981913_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_082988586.1\|4981947_4982595_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_066355269.1\|4982621_4986551_+	hypothetical protein	NA	NA	NA	NA
WP_066355277.1\|4986614_4987574_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_066355280.1\|4987826_4988729_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_066671712.1\|4988755_4990516_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_066671719.1\|4990582_4991587_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_066671728.1\|4991807_4993196_+	MFS transporter	NA	NA	NA	NA
WP_156774114.1\|4993527_4994364_+	hypothetical protein	NA	NA	NA	NA
WP_066671729.1\|4994653_4996474_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.8e-29	28.0
WP_066671730.1\|4996504_4997053_+	cysteine hydrolase	NA	NA	NA	NA
WP_066671732.1\|4997306_4998869_+	hypothetical protein	NA	NA	NA	NA
WP_066355311.1\|4998900_4999203_-	YciI family protein	NA	NA	NA	NA
WP_082988392.1\|4999557_5000658_+	biotin synthase BioB	NA	NA	NA	NA
WP_082988587.1\|5000654_5002124_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	NA	NA	NA
WP_082988393.1\|5002908_5004045_+	dethiobiotin synthase	NA	NA	NA	NA
WP_066355322.1\|5004115_5004643_-	thioredoxin family protein	NA	NA	NA	NA
WP_066671740.1\|5004653_5005403_-	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
WP_066355330.1\|5005651_5006023_+	GFA family protein	NA	NA	NA	NA
WP_066671743.1\|5006019_5006310_+	hypothetical protein	NA	NA	NA	NA
WP_066355349.1\|5006391_5007132_+	response regulator	NA	NA	NA	NA
WP_066671746.1\|5007145_5008471_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.9e-13	27.2
WP_066671748.1\|5008496_5008880_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_066671751.1\|5008894_5009947_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_066671754.1\|5009943_5012586_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_082988394.1\|5012590_5012992_-	hypothetical protein	NA	NA	NA	NA
WP_066671756.1\|5012988_5015376_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_066672978.1\|5015893_5016994_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_066671758.1\|5017026_5017596_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_066671760.1\|5017613_5019116_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_156770425.1\|5019300_5019771_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_066671762.1\|5019776_5020607_+	ImpE family protein	NA	NA	NA	NA
WP_082988395.1\|5020606_5021227_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_066671764.1\|5021226_5023134_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016171

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection