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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011393 Fervidobacterium pennivorans strain DYC, complete genome 5 crisprs cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csx1,cas2,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas1,cas14k,cas3HD,cas3,csa3,DEDDh 0 6 2 0

Results visualization

1. NZ_CP011393
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011393_1 145286-153064 TypeIII NA
110 spacers
cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csx1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011393_2 165380-165622 TypeIII NA
3 spacers
csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas2,cas6,csm5gr7,csm4gr5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011393_3 179852-186394 TypeIII NA
93 spacers
cas1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011393_4 1250555-1251644 Orphan NA
15 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011393_5 1836473-1836567 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NC_003099 Oenococcus oeni plasmid pRS3, complete sequence 1194-1227 8 0.765
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NC_006904 Oenococcus oeni M1 plasmid pOM1, complete sequence 1193-1226 8 0.765
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NZ_CP030869 Oenococcus sp. UCMA 16435 plasmid unnamed, complete sequence 1224-1257 8 0.765
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NC_004165 Bacillus phage B103, complete genome 4599-4632 8 0.765
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 X99260 Bacteriophage B103 genomic sequence 4599-4632 8 0.765
NZ_CP011393_1 1.91|151300|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 151300-151333 34 MN693589 Marine virus AFVG_25M348, complete genome 4877-4910 8 0.765
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_KX443408 Klebsiella pneumoniae strain SC24 plasmid pKSC24, complete sequence 26614-26646 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP021753 Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence 91042-91074 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP011977 Klebsiella pneumoniae DMC1097 plasmid pDMC1097-218.836kb, complete sequence 86392-86424 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP020523 Escherichia coli strain 190 plasmid unnamed2, complete sequence 30426-30458 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NC_019389 Klebsiella pneumoniae plasmid pKDO1, complete sequence 12054-12086 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP041642 Klebsiella pneumoniae strain PIMB15ND2KP27 plasmid pKP27-NDM4, complete sequence 101367-101399 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP021545 Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence 48895-48927 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_AP019690 Klebsiella quasipneumoniae strain SNI47 plasmid pTMSNI47-3, complete sequence 23697-23729 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP044038 Klebsiella pneumoniae strain FDAARGOS_630 plasmid unnamed4, complete sequence 66365-66397 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP008932 Klebsiella pneumoniae strain PMK1 plasmid pPMK1-C, complete sequence 18031-18063 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP006921 Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C3, complete sequence 10741-10773 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP034131 Klebsiella quasipneumoniae strain G4584 plasmid pG4584_136.4Kb, complete sequence 70779-70811 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP034137 Klebsiella quasipneumoniae subsp. similipneumoniae strain G747 plasmid pG747_150.8Kb, complete sequence 85244-85276 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP024510 Klebsiella pneumoniae strain KSB2_1B plasmid unnamed4, complete sequence 33175-33207 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_AP018673 Klebsiella pneumoniae strain GSU10-3 plasmid pGSU10-3-2, complete sequence 68087-68119 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP014765 Klebsiella pneumoniae strain KPNIH39 plasmid pKpQIL-9b8, complete sequence 52906-52938 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP019904 Escherichia coli strain MDR_56 plasmid unnamed1, complete sequence 77835-77867 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP026371 Klebsiella quasipneumoniae strain A708 plasmid pA708-3, complete sequence 33505-33537 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP017386 Klebsiella pneumoniae strain KP36 plasmid 1, complete sequence 91643-91675 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_KJ721789 Klebsiella pneumoniae strain NJ HT1872 plasmid pUSKPC3, complete sequence 133905-133937 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP025042 Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_5, complete sequence 14340-14372 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 LC549807 Klebsiella pneumoniae VNCKp115 plasmid pVNCKp115 DNA, complete sequence 209225-209257 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 KY930324 Klebsiella pneumoniae plasmid pUCLAKPC1, complete sequence 527-559 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP009774 Klebsiella pneumoniae subsp. pneumoniae strain KPNIH33 plasmid pNJST258N3-62b, complete sequence 527-559 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP006925 Klebsiella pneumoniae 30660/NJST258_1 plasmid pNJST258N3, complete sequence 527-559 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP021857 Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence 30985-31017 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP011630 Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-49, complete sequence 34608-34640 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP016925 Klebsiella pneumoniae isolate 23 plasmid pCTXM15_DHQP1400954, complete sequence 60424-60456 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 NZ_CP011646 Klebsiella pneumoniae strain CAV1596 plasmid pKPC_CAV1596-97, complete sequence 509-541 8 0.758
NZ_CP011393_3 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180518-180550 33 CP052391 Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-3, complete sequence 527-559 8 0.758
NZ_CP011393_1 1.2|145383|37|NZ_CP011393|PILER-CR 145383-145419 37 NZ_MF078635 Acinetobacter pittii strain HGSA535 plasmid pLS535, complete sequence 5501-5537 9 0.757
NZ_CP011393_1 1.2|145383|37|NZ_CP011393|PILER-CR 145383-145419 37 NZ_CP046298 Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed3, complete sequence 158-194 9 0.757
NZ_CP011393_1 1.2|145383|37|NZ_CP011393|PILER-CR 145383-145419 37 NZ_CP031999 Acinetobacter haemolyticus strain INNSZ174 plasmid pAhaemINNSZ174c, complete sequence 8409-8445 9 0.757
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NZ_AP014868 Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK4, complete sequence 42079-42112 9 0.735
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NC_020392 Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-63, complete sequence 60433-60466 9 0.735
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NZ_CP004873 Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB65, complete sequence 1871-1904 9 0.735
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NZ_CP007613 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB69, complete sequence 63558-63591 9 0.735
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NZ_CP004862 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB53, complete sequence 5212-5245 9 0.735
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NZ_CP010094 Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB55, complete sequence 7029-7062 9 0.735
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 NC_020249 Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT73, complete sequence 32825-32858 9 0.735
NZ_CP011393_3 3.73|184951|35|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 184951-184985 35 MG584725 Bacillus phage BVE2, complete genome 6697-6731 9 0.743
NZ_CP011393_1 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 147139-147172 34 MK448914 Streptococcus phage Javan348, complete genome 13432-13465 10 0.706
NZ_CP011393_1 1.91|151300|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 151300-151333 34 NC_008503 Lactococcus lactis subsp. cremoris SK11 plasmid 1, complete sequence 3983-4016 10 0.706
NZ_CP011393_1 1.91|151300|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 151300-151333 34 CP016691 Lactococcus lactis subsp. lactis strain 184 plasmid p184A, complete sequence 3167-3200 10 0.706
NZ_CP011393_1 1.91|151300|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR 151300-151333 34 NC_009137 Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pDBORO, complete sequence 1391-1424 10 0.706
NZ_CP011393_3 3.8|180381|35|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT 180381-180415 35 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 382703-382737 11 0.686

1. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NC_003099 (Oenococcus oeni plasmid pRS3, complete sequence) position: , mismatch: 8, identity: 0.765 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
aaacttggcaaagaaaaagagaagaaagacaagg	Protospacer
. **.*******.*************..* .***

2. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NC_006904 (Oenococcus oeni M1 plasmid pOM1, complete sequence) position: , mismatch: 8, identity: 0.765 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
aaacttggcaaagaaaaagagaagaaagacaagg	Protospacer
. **.*******.*************..* .***

3. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030869 (Oenococcus sp. UCMA 16435 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
aaacttggcaaagaaaaagagaagaaagacaagg	Protospacer
. **.*******.*************..* .***

4. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NC_004165 (Bacillus phage B103, complete genome) position: , mismatch: 8, identity: 0.765 

gcacctggcaaaa-aaaaagagaagaagaaggagg	CRISPR spacer
-tacccataaaaataaaaagagaagaaaaaggaga	Protospacer
 .***..  **** *************.******.

5. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to X99260 (Bacteriophage B103 genomic sequence) position: , mismatch: 8, identity: 0.765 

gcacctggcaaaa-aaaaagagaagaagaaggagg	CRISPR spacer
-tacccataaaaataaaaagagaagaaaaaggaga	Protospacer
 .***..  **** *************.******.

6. spacer 1.91|151300|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to MN693589 (Marine virus AFVG_25M348, complete genome) position: , mismatch: 8, identity: 0.765 

-tgccgcacccggccaaaaaataaaaaaactaaaa	CRISPR spacer
ataacaca-ccggccaaaaaataaaaacaataatt	Protospacer
 *. *.** ****************** * ***

7. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX443408 (Klebsiella pneumoniae strain SC24 plasmid pKSC24, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

8. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021753 (Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

9. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011977 (Klebsiella pneumoniae DMC1097 plasmid pDMC1097-218.836kb, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

10. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020523 (Escherichia coli strain 190 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

11. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NC_019389 (Klebsiella pneumoniae plasmid pKDO1, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

12. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041642 (Klebsiella pneumoniae strain PIMB15ND2KP27 plasmid pKP27-NDM4, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

13. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021545 (Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

14. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019690 (Klebsiella quasipneumoniae strain SNI47 plasmid pTMSNI47-3, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

15. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044038 (Klebsiella pneumoniae strain FDAARGOS_630 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

16. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008932 (Klebsiella pneumoniae strain PMK1 plasmid pPMK1-C, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

17. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006921 (Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C3, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

18. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034131 (Klebsiella quasipneumoniae strain G4584 plasmid pG4584_136.4Kb, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

19. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034137 (Klebsiella quasipneumoniae subsp. similipneumoniae strain G747 plasmid pG747_150.8Kb, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

20. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024510 (Klebsiella pneumoniae strain KSB2_1B plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

21. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018673 (Klebsiella pneumoniae strain GSU10-3 plasmid pGSU10-3-2, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

22. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014765 (Klebsiella pneumoniae strain KPNIH39 plasmid pKpQIL-9b8, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

23. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019904 (Escherichia coli strain MDR_56 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

24. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026371 (Klebsiella quasipneumoniae strain A708 plasmid pA708-3, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

25. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017386 (Klebsiella pneumoniae strain KP36 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

26. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ721789 (Klebsiella pneumoniae strain NJ HT1872 plasmid pUSKPC3, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

27. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025042 (Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_5, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

28. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to LC549807 (Klebsiella pneumoniae VNCKp115 plasmid pVNCKp115 DNA, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

29. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to KY930324 (Klebsiella pneumoniae plasmid pUCLAKPC1, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

30. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009774 (Klebsiella pneumoniae subsp. pneumoniae strain KPNIH33 plasmid pNJST258N3-62b, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

31. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006925 (Klebsiella pneumoniae 30660/NJST258_1 plasmid pNJST258N3, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

32. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021857 (Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

33. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011630 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-49, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

34. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016925 (Klebsiella pneumoniae isolate 23 plasmid pCTXM15_DHQP1400954, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

35. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011646 (Klebsiella pneumoniae strain CAV1596 plasmid pKPC_CAV1596-97, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

36. spacer 3.10|180518|33|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to CP052391 (Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-3, complete sequence) position: , mismatch: 8, identity: 0.758 

tgatttgttccaccaagtcgtttgcataatcca	CRISPR spacer
cttcaagttccaccaggtcgtttgcaaaatcca	Protospacer
.  .  *********.********** ******

37. spacer 1.2|145383|37|NZ_CP011393|PILER-CR matches to NZ_MF078635 (Acinetobacter pittii strain HGSA535 plasmid pLS535, complete sequence) position: , mismatch: 9, identity: 0.757 

-----atagaattagcaaagctcattgaaaaatacggtgcag	CRISPR spacer
gatctatgtaa-----aaagctcgttgaaaaatatggtgcag	Protospacer
     **. **     *******.**********.*******

38. spacer 1.2|145383|37|NZ_CP011393|PILER-CR matches to NZ_CP046298 (Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.757 

-----atagaattagcaaagctcattgaaaaatacggtgcag	CRISPR spacer
gatctatgtaa-----aaagctcgttgaaaaatatggtgcag	Protospacer
     **. **     *******.**********.*******

39. spacer 1.2|145383|37|NZ_CP011393|PILER-CR matches to NZ_CP031999 (Acinetobacter haemolyticus strain INNSZ174 plasmid pAhaemINNSZ174c, complete sequence) position: , mismatch: 9, identity: 0.757 

-----atagaattagcaaagctcattgaaaaatacggtgcag	CRISPR spacer
gatctatgtaa-----aaagctcgttgaaaaatatggtgcag	Protospacer
     **. **     *******.**********.*******

40. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014868 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK4, complete sequence) position: , mismatch: 9, identity: 0.735 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
tcgcgacgaaaaaaacaagaaaagaagaaggaga	Protospacer
 *.*   * ****** ****.************.

41. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NC_020392 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-63, complete sequence) position: , mismatch: 9, identity: 0.735 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
tcgcgacgaaaaaaacaagaaaagaagaaggaga	Protospacer
 *.*   * ****** ****.************.

42. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004873 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB65, complete sequence) position: , mismatch: 9, identity: 0.735 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
tcgcgacgaaaaaaacaagaaaagaagaaggaga	Protospacer
 *.*   * ****** ****.************.

43. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007613 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB69, complete sequence) position: , mismatch: 9, identity: 0.735 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
tcgcgacgaaaaaaacaagaaaagaagaaggaga	Protospacer
 *.*   * ****** ****.************.

44. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004862 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB53, complete sequence) position: , mismatch: 9, identity: 0.735 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
tcgcgacgaaaaaaacaagaaaagaagaaggaga	Protospacer
 *.*   * ****** ****.************.

45. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010094 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB55, complete sequence) position: , mismatch: 9, identity: 0.735 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
tcgcgacgaaaaaaacaagaaaagaagaaggaga	Protospacer
 *.*   * ****** ****.************.

46. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NC_020249 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT73, complete sequence) position: , mismatch: 9, identity: 0.735 

gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
tcgcgacgaaaaaaacaagaaaagaagaaggaga	Protospacer
 *.*   * ****** ****.************.

47. spacer 3.73|184951|35|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to MG584725 (Bacillus phage BVE2, complete genome) position: , mismatch: 9, identity: 0.743 

taaagcttgttttttgttttaatacctttaccata	CRISPR spacer
taaagcttgttatttgttttattaccgcatcttga	Protospacer
*********** ********* **** .  *.  *

48. spacer 1.32|147139|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to MK448914 (Streptococcus phage Javan348, complete genome) position: , mismatch: 10, identity: 0.706 

-gcacctggcaaaaaaaaagagaagaagaaggagg	CRISPR spacer
tgta-ttggcaaaaaaaaagaaaaaaagaattttt	Protospacer
 *.* .***************.**.*****

49. spacer 1.91|151300|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NC_008503 (Lactococcus lactis subsp. cremoris SK11 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.706 

tgccgcacccggccaaaaaataaaaaaactaaaa	CRISPR spacer
ttattaatgaggccaataaataaaaaaattaaaa	Protospacer
*  .  *.  ****** ***********.*****

50. spacer 1.91|151300|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to CP016691 (Lactococcus lactis subsp. lactis strain 184 plasmid p184A, complete sequence) position: , mismatch: 10, identity: 0.706 

tgccgcacccggccaaaaaataaaaaaactaaaa	CRISPR spacer
ttattaatgaggccaataaataaaaaaattaaaa	Protospacer
*  .  *.  ****** ***********.*****

51. spacer 1.91|151300|34|NZ_CP011393|CRISPRCasFinder,CRT,PILER-CR matches to NC_009137 (Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pDBORO, complete sequence) position: , mismatch: 10, identity: 0.706 

tgccgcacccggccaaaaaataaaaaaactaaaa	CRISPR spacer
ttattaatgaggccaataaataaaaaaattaaaa	Protospacer
*  .  *.  ****** ***********.*****

52. spacer 3.8|180381|35|NZ_CP011393|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 11, identity: 0.686 

ggctttataaacttttgtttccttaccgaaaaata	CRISPR spacer
acctttaccaacttttgtttccttaccttctcaat	Protospacer
. *****. ******************     *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 642211 : 689650 43 Bacteriophage(14.29%) protease,integrase,transposase,tRNA attL 649859:649875|attR 687170:687186
DBSCAN-SWA_2 992653 : 1002739 10 Bacillus_phage(57.14%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage