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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010842 Bordetella pertussis strain H489 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 29 0

Results visualization

1. NZ_CP010842
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010842_1 250589-250673 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010842_2 623997-624106 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010842_3 2126039-2126166 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010842_4 2909670-2909786 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010842_5 3624441-3624534 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 64269 52 Natrialba_phage(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_2 104682 : 172506 57 Bacillus_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 200329 : 236269 33 Sphingobium_phage(33.33%) transposase NA
DBSCAN-SWA_4 250683 : 303019 48 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_5 555307 : 614607 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_6 620762 : 675552 49 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 724490 : 764402 30 Pseudomonas_phage(33.33%) transposase,integrase,tRNA,protease attL 721738:721756|attR 741626:741644
DBSCAN-SWA_8 774329 : 821947 47 Bovine_alphaherpesvirus(10.0%) transposase,tRNA,protease,holin NA
DBSCAN-SWA_9 1006163 : 1100200 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1130586 : 1201560 53 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_11 1242631 : 1324766 60 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_12 1328877 : 1369546 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1414484 : 1470890 51 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_14 1546350 : 1606262 52 Streptococcus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_15 1651434 : 1707025 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 2027200 : 2061812 32 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_17 2075313 : 2140861 58 Lake_Baikal_phage(20.0%) transposase,tRNA,protease NA
DBSCAN-SWA_18 2168644 : 2220441 50 Klosneuvirus(22.22%) transposase,tRNA,protease NA
DBSCAN-SWA_19 2226411 : 2282505 53 uncultured_Caudovirales_phage(20.0%) transposase NA
DBSCAN-SWA_20 2509211 : 2567455 54 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_21 2609735 : 2676235 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_22 2874574 : 2947900 53 Catovirus(22.22%) transposase,tRNA,protease NA
DBSCAN-SWA_23 2959625 : 3009238 42 uncultured_Mediterranean_phage(50.0%) transposase,tRNA,holin NA
DBSCAN-SWA_24 3030189 : 3102683 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_25 3116190 : 3169708 44 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_26 3234166 : 3307328 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_27 3318615 : 3418728 108 uncultured_Caudovirales_phage(14.29%) transposase,tRNA,terminase,tail,protease NA
DBSCAN-SWA_28 3706393 : 3839319 115 uncultured_Mediterranean_phage(10.34%) transposase,integrase,tRNA attL 3751036:3751053|attR 3795676:3795693
DBSCAN-SWA_29 4028535 : 4081967 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage