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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP007440 Rhodoplanes sp. Z2-YC6860, complete genome 2 crisprs csa3,RT,WYL,PD-DExK 0 1 2 0

Results visualization

1. NZ_CP007440
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007440_1 831836-831975 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007440_2 3644103-3644332 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP007440_2 2.2|3644272|28|NZ_CP007440|PILER-CR 3644272-3644299 28 MN234219 Mycobacterium phage Mercurio, complete genome 41252-41279 5 0.821
NZ_CP007440_2 2.2|3644272|28|NZ_CP007440|PILER-CR 3644272-3644299 28 MN234185 Mycobacterium phage Lemuria, complete genome 40580-40607 5 0.821
NZ_CP007440_2 2.2|3644272|28|NZ_CP007440|PILER-CR 3644272-3644299 28 NZ_CP017244 Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence 985557-985584 6 0.786
NZ_CP007440_2 2.2|3644272|28|NZ_CP007440|PILER-CR 3644272-3644299 28 MF403007 Agrobacterium phage Atu_ph04, complete genome 129791-129818 7 0.75

1. spacer 2.2|3644272|28|NZ_CP007440|PILER-CR matches to MN234219 (Mycobacterium phage Mercurio, complete genome) position: , mismatch: 5, identity: 0.821

aactcgtcgacgacgaagtcaggcactt	CRISPR spacer
tagtggtcgccgacgaagtgaggcactt	Protospacer
 * * **** ********* ********

2. spacer 2.2|3644272|28|NZ_CP007440|PILER-CR matches to MN234185 (Mycobacterium phage Lemuria, complete genome) position: , mismatch: 5, identity: 0.821

aactcgtcgacgacgaagtcaggcactt	CRISPR spacer
tagtggtcgccgacgaagtgaggcactt	Protospacer
 * * **** ********* ********

3. spacer 2.2|3644272|28|NZ_CP007440|PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 6, identity: 0.786

aactcgtcgacgacgaagtcaggcactt	CRISPR spacer
aactggtcgacgacgaagccaggaagaa	Protospacer
**** *************.**** *   

4. spacer 2.2|3644272|28|NZ_CP007440|PILER-CR matches to MF403007 (Agrobacterium phage Atu_ph04, complete genome) position: , mismatch: 7, identity: 0.75

aactcgtcgacgacgaagtcaggcactt	CRISPR spacer
ttgacaccgacgacgaagtcaggaactt	Protospacer
    *..**************** ****

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4012647 : 4021941 10 uncultured_Mediterranean_phage(87.5%) tRNA NA
DBSCAN-SWA_2 8039827 : 8048684 7 uncultured_virus(83.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage