CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014495	Escherichia coli strain SaT040 chromosome, complete genome	2 crisprs	DinG,cas3,RT,DEDDh,c2c9_V-U4,csa3,WYL	0	1	10	0
NZ_CP014496	Escherichia coli strain SaT040 plasmid pSaT040, complete sequence	0 crisprs	RT	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014495_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014495_1

766026-766167

Orphan

Consensus_repeat	Method
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014495_1

>merge|NZ_CP014495|1|766026-766167|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAGAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGCGCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

>NZ_CP014495|1|1|766026-766167|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	AAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGC
GCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014495.1\|WP_001235263.1\|765262_765979_+\|succinate-dehydrogenase-iron-sulfur-subunit-SdhB	unknown	unknown	gnl\|CDD\|235652
NZ_CP014495.1\|WP_000725054.1\|779598_780792_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP014495.1\|WP_000025458.1\|771633_772503_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_CP014495.1\|WP_001305582.1\|762247_762355_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014495.1\|WP_001048602.1\|770467_771634_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_CP014495.1\|WP_001181475.1\|766340_769142_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP014495.1\|WP_000884361.1\|782334_783903_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|185052
NZ_CP014495.1\|WP_000785832.1\|760758_762042_-\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164
NZ_CP014495.1\|WP_000735581.1\|757912_758881_+\|C4-dicarboxylate-TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270387
NZ_CP014495.1\|WP_001237779.1\|758940_759402_+\|TRAP-transporter-small-permease	unknown	unknown	gnl\|CDD\|225632
NZ_CP014495.1\|WP_000568275.1\|783918_785058_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
NZ_CP014495.1\|WP_000263355.1\|762735_763140_+\|succinate-dehydrogenase-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|181900
NZ_CP014495.1\|WP_000509910.1\|772606_773329_-\|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR	unknown	unknown	gnl\|CDD\|182065
NZ_CP014495.1\|WP_000126143.1\|759401_760712_+\|TRAP-transporter-large-permease	unknown	unknown	gnl\|CDD\|224509
NZ_CP014495.1\|WP_001531490.1\|773497_775414_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	unknown	unknown	gnl\|CDD\|182066
NZ_CP014495.1\|WP_000099866.1\|769156_770374_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP014495.1\|WP_000254365.1\|763133_763481_+\|succinate-dehydrogenase-membrane-anchor-subunit	unknown	unknown	gnl\|CDD\|181901
NZ_CP014495.1\|WP_000399432.1\|756688_757885_+\|UxaA-family-hydrolase	unknown	unknown	gnl\|CDD\|377287
NZ_CP014495.1\|WP_000775540.1\|763480_765247_+\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|181594
NZ_CP014495.1\|WP_103103190.1\|775978_777207_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|181829

Protein	Function_ID	Function_description	E-value
NZ_CP014495.1\|WP_001235263.1\|765262_765979_+\|succinate-dehydrogenase-iron-sulfur-subunit-SdhB	gnl\|CDD\|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	3.48257e-167
NZ_CP014495.1\|WP_000725054.1\|779598_780792_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.01578e-17
NZ_CP014495.1\|WP_000025458.1\|771633_772503_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP014495.1\|WP_001531490.1\|773497_775414_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	gnl\|CDD\|182066	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional.	0
NZ_CP014495.1\|WP_001048602.1\|770467_771634_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP014495.1\|WP_001181475.1\|766340_769142_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP014495.1\|WP_000884361.1\|782334_783903_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
NZ_CP014495.1\|WP_000785832.1\|760758_762042_-\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
NZ_CP014495.1\|WP_000735581.1\|757912_758881_+\|C4-dicarboxylate-TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270387	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold. This subgroup includes the hyperthermophilic bacterium Thermotoga maritima TRAP-type C4-dicarboxylate transport system TM0322 and its closely related proteins. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.46494e-145
NZ_CP014495.1\|WP_001237779.1\|758940_759402_+\|TRAP-transporter-small-permease	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	2.66483e-21
NZ_CP014495.1\|WP_000568275.1\|783918_785058_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	0
NZ_CP014495.1\|WP_000263355.1\|762735_763140_+\|succinate-dehydrogenase-cytochrome-b556-subunit	gnl\|CDD\|181900	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit.	3.50714e-82
NZ_CP014495.1\|WP_000509910.1\|772606_773329_-\|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR	gnl\|CDD\|182065	PRK09764, PRK09764, GntR family transcriptional regulator.	1.54929e-163
NZ_CP014495.1\|WP_000126143.1\|759401_760712_+\|TRAP-transporter-large-permease	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	2.11617e-118
NZ_CP014495.1\|WP_000099866.1\|769156_770374_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NZ_CP014495.1\|WP_000254365.1\|763133_763481_+\|succinate-dehydrogenase-membrane-anchor-subunit	gnl\|CDD\|181901	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit.	5.54037e-58
NZ_CP014495.1\|WP_000399432.1\|756688_757885_+\|UxaA-family-hydrolase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	5.6924e-134
NZ_CP014495.1\|WP_000775540.1\|763480_765247_+\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|181594	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP014495.1\|WP_103103190.1\|775978_777207_-\|IS3-family-transposase	gnl\|CDD\|181829	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed.	0

>NZ_CP014495.1|WP_001235263.1|765262_765979_+|succinate-dehydrogenase-iron-sulfur-subunit-SdhB
MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA
>NZ_CP014495.1|WP_000775540.1|763480_765247_+|succinate-dehydrogenase-flavoprotein-subunit
MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY
>NZ_CP014495.1|WP_000254365.1|763133_763481_+|succinate-dehydrogenase-membrane-anchor-subunit
MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV
>NZ_CP014495.1|WP_000263355.1|762735_763140_+|succinate-dehydrogenase-cytochrome-b556-subunit
MWALFMIRNVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
>NZ_CP014495.1|WP_001305582.1|762247_762355_-|hypothetical-protein
MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV
>NZ_CP014495.1|WP_000785832.1|760758_762042_-|citrate-(Si)-synthase
MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYAQRDFKSDIKK
>NZ_CP014495.1|WP_000126143.1|759401_760712_+|TRAP-transporter-large-permease
MTALSELLAGSWLDNWLMIIPLMFVCLFINMPVWLAMFCGILTYFLCYSNVPLMVAIQRLIATTQTPSLLAIPFFILLGTLMSYTGIAARILQIANVLIGRMRGGLGGANILVSTMMGGVSASNLADAAMLSRMMVPEMEQKGYSRGFAAAITASGSLITPIIPPGIALILYGLVADVSIGSMFMAGILPGLLCSAMLIVTVWLVAIRRGLKPSSEHWPKPKEVSVALVQAWPALFLIVAVIGGIRANIFTPTEAGAVAVLLVMFIGFVIYRELKISHVFTALSETARSTASVMLIIMASAALGWIFSLERAGITVAEFVTSLTDNKYVFLLIINLLLLVLGMFLEGSAILLILVPLLKPVVAHFGIDPVHFGIIMILNLSLGTLSPPVGTVMLLVCNTVQVSVGQFMREAVPLLISLILLLLVITYIPAISLLLV
>NZ_CP014495.1|WP_001237779.1|758940_759402_+|TRAP-transporter-small-permease
MRLLGKMIEVAAVLTLFILVIMTIAAVIMRYCFHMPLQWTEEVSGLLMIWVVMFGAVVAERDNTHLSIPFLADALTSRGQRILAFLVSLMSIILLVVMAWSAWKLAAGTAFKTTQILKISWFWIDIAVTVGAIGVACFTALQLIKKTPRKEGE
>NZ_CP014495.1|WP_000735581.1|757912_758881_+|C4-dicarboxylate-TRAP-transporter-substrate-binding-protein
MKKLLTPLLFLLALFSPMLNAAPVTIKIAYESNPGEPADTVVKHWAELVKKKSNGDIVFELYPSSQLGSKQDITEQALMGMNIITISDVGFLTDYDADLGILFGPYLTEDPQKLFAIYASDWFKQKEQKLREKGVHIVMSNYLYGTRQIIAKKPIRTPEDLKGMKIRVPNNVMQIKAIEAMGATPTPMPLGDVYPALTQGMIDGVENPVSVLYGQKLHEQAKYLSMVNYLTNTSLWLGGEAFFSTLTPAQLDIIHQTAYEAGLYSQKITTEQDATMLKTMQEQGVEIIYPDVAPFKEKALKVYQQFPEWTPGLYDTIQQQLK
>NZ_CP014495.1|WP_000399432.1|756688_757885_+|UxaA-family-hydrolase
MEGYVRQNGRPGIRNTVQVIFMVECASHVAKKIAEGFPCHDVQYFGFSGCYPSDYGYRLVKNLATHSNVGGVLIISLGCENFDRRRLEQEVRESGRPCHTLVIQENKGTTNTITLGKQLVAEMLEQLADTPRCILNWSDLVVGTICGGSDGTSGITGNPAVGRAFDQLLEKGATCIFEESGELLGCEQHMMSRAASSQARDAIEVAMTKAERYYSLMGLGSFSNGNAEGGLTTQEEKSLGAYTKSGDALIAGVILPTQQTPFPGLWLMDVVPDGEPRFGYPNINDSSEALELIASGCHMVLFTTGRGSVIGSVIAPIIKVCNNPQTWEHLSDDMDVNAGRVISEGATLDDIADDIMQVIEHVANGQYCAAERLEHQEFVLTYKAFDYSKSAVCRADPR
>NZ_CP014495.1|WP_001181475.1|766340_769142_+|2-oxoglutarate-dehydrogenase-E1-component
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAISEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE
>NZ_CP014495.1|WP_000099866.1|769156_770374_+|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MSSVDILVPDLPESVADATVATWHKKPGDVVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV
>NZ_CP014495.1|WP_001048602.1|770467_771634_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK
>NZ_CP014495.1|WP_000025458.1|771633_772503_+|succinate--CoA-ligase-subunit-alpha
MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK
>NZ_CP014495.1|WP_000509910.1|772606_773329_-|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR
MGHKPLYRQIADRIREQITCGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVETHSEVLIFEVIPADNFLQQQLQISEQDRVWHVKRVRYRKQKPVALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGQVFEYSRNAFNTDDYKFTLIAQRKSPR
>NZ_CP014495.1|WP_001531490.1|773497_775414_+|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC
MNLTTLTHRDALCLNVRFTSREEAIHALTQRLAALGKISSTEQFLEEVYCRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMKLLTALTTRLADDELRARIQSATTPDELLSALDDKGDAQHTASFSYAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNIYVEKQGANGIEERLTAEQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGMLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGNNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLIWRHHAVKHGNYLTDGVMP
>NZ_CP014495.1|WP_103103190.1|775978_777207_-|IS3-family-transposase
MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRGKKVDSARALIARGWGVSFVSRCLRVSRAQLHVILRRADDWKDGRRSRHTDDTDVLRRIHHVIGELPTYGYRRVWALLRRQTELDGMPAINAKRIYRIMRQNALLLERKTAVPPSKRAHTGRVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNELPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIIPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
>NZ_CP014495.1|WP_000725054.1|779598_780792_+|tetratricopeptide-repeat-protein
MKKIVLPVALALLGMNAGAYAADVSIDILSATVKDKRIEGASVTLQRNGAQSVSGITNTSGSISLGTSFADNKDALLIVKKEGYSNLVVKCPCAGMTYAISPVMTNLDGMRVVLSWGEKPFDLDSHLIFPGGHIYFDSKEGTDANLDVDDTDSYGPETVTISKKHFGESYIYAVQDYSNKGLPNSNYLSASKAKVFVYVGSSLVRSYSVPAGKRGNIWTVFKLNPNGEFEDINSVTSANFNGTTLDVRDLATVIMPATDSSAPASPAMQNSGDTQLARKYNREGEAVYKTGQLEQAIQLFQQATELDGNYGQAFSNLGLAYQKNGNIAEAIWANRKAISLASGVNAATTRANSYYNIAKIYETSGQNAEALQHYQLAYTEKNKPSYEEAIARVKTKM
>NZ_CP014495.1|WP_000884361.1|782334_783903_+|cytochrome-ubiquinol-oxidase-subunit-I
MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR
>NZ_CP014495.1|WP_000568275.1|783918_785058_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY

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Crispr_ID: NZ_CP014495_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014495_2

948054-948136

Orphan

I-F

Consensus_repeat	Method
AGTTCACTGCCGTACAGGCAGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014495_2

>merge|NZ_CP014495|2|948054-948136|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCTTAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACAAGTTCACTGCCGTACAGGCAGAT

>NZ_CP014495|2|2|948054-948136|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCT	TAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACA
AGTTCACTGCCGTACAGGCAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014495.1\|WP_001576607.1\|939196_939757_+\|HK97-family-phage-prohead-protease	unknown	unknown	gnl\|CDD\|226263
NZ_CP014495.1\|WP_000520781.1\|945214_945535_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP014495.1\|WP_001576608.1\|940965_941268_+\|phage-gp6-like-head-tail-connector-protein	unknown	unknown	gnl\|CDD\|153446
NZ_CP014495.1\|WP_001576618.1\|948637_949231_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014495.1\|WP_001202204.1\|956154_957876_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP014495.1\|WP_106376849.1\|950891_951236_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014495.1\|WP_001241674.1\|955408_956113_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP014495.1\|WP_001040187.1\|954905_955124_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP014495.1\|WP_000934041.1\|945565_947842_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP014495.1\|WP_000270251.1\|939758_940973_+\|phage-portal-protein	unknown	unknown	gnl\|CDD\|227039
NZ_CP014495.1\|WP_001576610.1\|942336_943998_+\|terminase-large-subunit	unknown	unknown	gnl\|CDD\|226974
NZ_CP014495.1\|WP_000113645.1\|941996_942353_+\|phage-terminase-small-subunit-P27-family	unknown	unknown	gnl\|CDD\|226270
NZ_CP014495.1\|WP_001576609.1\|941267_941708_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP014495.1\|WP_072256913.1\|941691_941877_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014495.1\|WP_001576626.1\|951508_951700_+\|toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|310261
NZ_CP014495.1\|WP_001576623.1\|950616_950895_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014495.1\|WP_073970534.1\|952838_953807_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP014495.1\|WP_001576621.1\|949848_950376_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|337191
NZ_CP014495.1\|WP_001576620.1\|949232_949847_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222855
NZ_CP014495.1\|WP_024187907.1\|944003_944288_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP014495.1\|WP_001576607.1\|939196_939757_+\|HK97-family-phage-prohead-protease	gnl\|CDD\|226263	COG3740, COG3740, Phage head maturation protease [General function prediction only].	1.46546e-55
NZ_CP014495.1\|WP_000520781.1\|945214_945535_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP014495.1\|WP_001576608.1\|940965_941268_+\|phage-gp6-like-head-tail-connector-protein	gnl\|CDD\|153446	cd08054, gp6, Head-Tail Connector Protein gp6 of Bacteriophage HK97 and similar proteins. The bacteriophage HK97 gp6 protein is critical in the assembly of the connector, a specialized structure that serves as an interface for head and tail attachment, as well as a point at which DNA exits the head during infection by the bacteriophage. It forms a dodecameric ring structure that comprises the middle ring of the connector, located between the portal protein (attached to the head) and the gp7 ring (attached to the tail). It is a component of the mature phage and the absence of HK97 gp6 results in defective head-tail joining and the absence of mature phage particles. Although the crystal structure of HK97 gp6 shows an unexpected 13-mer ring, the biological form present in the mature phage is believed to be a dodecamer.	1.28486e-20
NZ_CP014495.1\|WP_001202204.1\|956154_957876_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP014495.1\|WP_001241674.1\|955408_956113_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.92039e-139
NZ_CP014495.1\|WP_000934041.1\|945565_947842_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP014495.1\|WP_000270251.1\|939758_940973_+\|phage-portal-protein	gnl\|CDD\|227039	COG4695, COG4695, Phage-related protein [Function unknown].	2.72097e-128
NZ_CP014495.1\|WP_001576610.1\|942336_943998_+\|terminase-large-subunit	gnl\|CDD\|226974	COG4626, COG4626, Phage terminase-like protein, large subunit [General function prediction only].	0
NZ_CP014495.1\|WP_000113645.1\|941996_942353_+\|phage-terminase-small-subunit-P27-family	gnl\|CDD\|226270	COG3747, COG3747, Phage terminase, small subunit [DNA replication, recombination, and repair].	1.73765e-48
NZ_CP014495.1\|WP_001576609.1\|941267_941708_+\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	4.82424e-16
NZ_CP014495.1\|WP_001576626.1\|951508_951700_+\|toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|310261	pfam05534, HicB, HicB family. This family consists of several bacterial HicB related proteins. The function of HicB is unknown although it is thought to be involved in pilus formation. It has been speculated that HicB performs a function antagonistic to that of pili and yet is necessary for invasion of certain niches.	0.00010501
NZ_CP014495.1\|WP_073970534.1\|952838_953807_-\|IS5-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	3.50743e-55
NZ_CP014495.1\|WP_001576621.1\|949848_950376_-\|hypothetical-protein	gnl\|CDD\|337191	pfam08765, Mor, Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	1.95619e-11
NZ_CP014495.1\|WP_001576620.1\|949232_949847_-\|hypothetical-protein	gnl\|CDD\|222855	PHA02529, O, capsid-scaffolding protein; Provisional.	0.000410051
NZ_CP014495.1\|WP_001040187.1\|954905_955124_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49

>NZ_CP014495.1|WP_000934041.1|945565_947842_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP014495.1|WP_000520781.1|945214_945535_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP014495.1|WP_024187907.1|944003_944288_+|hypothetical-protein
MSETELLKIIRRVTGASQTADKQEATQPDSVIAENYARVVAEVMRRDGIELNGVDMRNIRTRVLELLAYRRRSQQRRESAKNTYQWKKPERLRR
>NZ_CP014495.1|WP_001576610.1|942336_943998_+|terminase-large-subunit
MTAWNKYAEDVKTGKIPACKRLKQAVKRYFSDLESPLYTFDREVVERFIAFSRVCAHVKGPMRGRPIELEPWQQFAFACILGFKVKATGRRKYTSAFIEVPRKNAKSTTAAILANWFLIMENGQQDIYTAAVSRDQARIVFDDARQMCLLSRPLRRRVNIQAHKVIHPKTNSLLKPLAAKAATIEGTNPSLAIVDEYHLHPDNGVYSALDMGMGARPEGLLFAITTSGSNVVSACKQHYDYCCQILDGEEVNDSIFVLIYELDDENEVDDPAMWIKANPNIDVSVDREKLASTIQKARGIPSQWVEMLTKRFNIWCQGATPWMGNGAWAECAGTFAEADLYGQECYAGLDLSSTSDISSVCYAFPVGKKIMLVSRHYLPEFQLQNPANKNRAIYRQWVKAGWIRTTPGDCIDYDRIRDDIMADAENFNIRLVGFDTWNATHLRTQLQGAGFEVEPFPQTYLRFSPAAKSFEVFVNRKVIVHRGDPVLAWSMSNVVMQSDANANIKPNKKKSSNKIDPSVAALMAFGTFQAEHEDFAFDMSDSHKERLAAFDGV
>NZ_CP014495.1|WP_000113645.1|941996_942353_+|phage-terminase-small-subunit-P27-family
MARPPKAPAYLDDIAVKQWREKSRQLAERGDLTPADWSNLELYCVNYSIYRKAVADLAARGFSIVNSQGGESRNPALSAKSDAERVMIKMASLLGFDPISRRKNPPETEEEDELDRLE
>NZ_CP014495.1|WP_072256913.1|941691_941877_+|hypothetical-protein
MAMMTEQEQNRLIRGLIRQRDTWKTQETGHKANRTGRTKRTTAKRLTDRDREVMECFRNRW
>NZ_CP014495.1|WP_001576609.1|941267_941708_+|HNH-endonuclease
MPWQPLRRCTEPGCNKRVKSGKCEEHRRAAWRAEDARRGHRRARGYSRQWDKYRALYLSKNPLCVSCLAKGIYTPALVVDHIIPINGGGDVLFWPEWNHQALCQTCHNRKTTREDPATKANRKAGMYRDQEERAAHRNDWMYGDDD
>NZ_CP014495.1|WP_001576608.1|940965_941268_+|phage-gp6-like-head-tail-connector-protein
MSEAKITPDEVRAHLRLDDDLSGEGELLKMYTDAALEACQKHIGKRFEDGLEFTPAMRVGCLMYIAFLYENREAVSPVEHSELPMAISALWSVYRDVGVY
>NZ_CP014495.1|WP_000270251.1|939758_940973_+|phage-portal-protein
MWWPFSRKKSEQRNLSIDDFLALSGVPNTGSGEYVSAGTAESLPAVMNAVSVIAEAVATMPCYLYLVRNDKGREAREWLDSHPVDILLNEQPNSCQTPYQFKRTMMRHCLLNGNAYAVIEWGQDGQPKSLHPYAPGCVVPERTGAHKYRYTITEPCTGTVRTYLQEEVLHLRYASDDGFLGRSPVTICREALGLGLAQQRHGASIMKDGMMAAGIITSGEWLDGVKGKQALDALERYKGAKNAGKTPILEGGMDYRQLGMSNQDAEWLASRRFSIEDIARMFNVSPIFLQEYSNSTYSNFSEASRAFLTMTMRPWLANFEQQIKAALLVASPVPGTRYLVEFDSADLLRATPTERYATYEKGIKNGIMNPNEAREREGMPPREGGDEFSQAWKQTVEIKGRKDE
>NZ_CP014495.1|WP_001576607.1|939196_939757_+|HK97-family-phage-prohead-protease
MKNTDFEIRTSELTASNKKLVGYAVRWNSLSEIIWDEFREQFTPGAFADYLATGNDVRCLYEHDYTQLLGRTKSGTLVLTEDNTGLRFELTPPDTQLGKDVLTLVERGDITGMSFGFRALCEEWSIAQKPYLRTVTAAELREITITSMPAYPESGVEIAHRSLFAQHPELRPTGNNLHRWSELAGL
>NZ_CP014495.1|WP_001576618.1|948637_949231_-|hypothetical-protein
MKPVISLIEALNAVKNNLASLNEQKEKLSRRIGEINSEITTLQDMPLSLNDYCSFIPEYIERFGQEEYQSFKLALCNGSGSEGNAERWGNLENENGDISGLFRLVGLSGNVPLADVGMTVMRKLCFFFPDVVATRLTEALKKDKSVAWGNDNLPSLADRRKTVAALVNERTKLEIELKSVSEEIAGITEISNLSMTE
>NZ_CP014495.1|WP_001576620.1|949232_949847_-|hypothetical-protein
MKDIDIGNWKTIEIFRAGTHITMAGQEIAFSDEDIDNMAAAYNGYHRAGYGAPLCIGHPASNSPSYGETTGLISKNGRLFALVKPDETLLGLVRAGRYRKVSAAFYRPGEANNPAGIGAWYLQHIGFLGSQPPAVKGLAQVEFMESCYPVCFYHNESHVHFSEFDGIADSQRAAQHLLIKDVSAACNVSYSEALALTTPFIWSY
>NZ_CP014495.1|WP_001576621.1|949848_950376_-|hypothetical-protein
MITREGLYASSDTLGAMGDAIEVFLINKGYSRQQSCSAANHIVLGISDNLGGCQGYMAEHRERAPKAVRFLQELTESIEQTLGTIPYLCSQAEKLSPAITECLRNTFFRGNIYIPMGASKNTFDRNSKILADFYQGISIFELSKKYKRSIQCIYQIIAAERKKNKIQRDAKYGVI
>NZ_CP014495.1|WP_001576623.1|950616_950895_-|hypothetical-protein
MKATANFIACPHESQGTSYDVLFVNADAPSTEIWEAAFSRLEAVRRLNDELSVAVDDKSTQTPLALVNSILLSDAMAMINLIGNRLDQESKE
>NZ_CP014495.1|WP_106376849.1|950891_951236_-|hypothetical-protein
MNAIVKECNGNTVVFSYEQYPQANHSFPLNAFVNIFERRDIPQQQLQNIDHKKTYCRELFRVALRYSGTTELDILTKSIEEFIACSLADKYSPGLNAASYEIYNKFIINRRTAK
>NZ_CP014495.1|WP_001576626.1|951508_951700_+|toxin-antitoxin-system-HicB-family-antitoxin
MSTILRDKSQKGAGKAPMFNVRISPDLKEQFEIQAKKEGVSLGNWLKELGRAELKRKGIEPKG
>NZ_CP014495.1|WP_073970534.1|952838_953807_-|IS5-family-transposase
MKDQITHLPDNADRSVAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFTLMNVPLRCPDYTSVSKRAKSVNVSFKTFTRGEIAHLVIDSTGLKVFGEGEWKVKKHGKERRRIWRKLHLAVDSKTHEIICADLSLNNVTDSEAFPGLIRQTHRKIRAASADGAYDTRLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRLTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVRIA
>NZ_CP014495.1|WP_001040187.1|954905_955124_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP014495.1|WP_001241674.1|955408_956113_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCDEFIRHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLSNNFWVPRCLFSPQE
>NZ_CP014495.1|WP_001202204.1|956154_957876_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPKVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIYLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12111-12158	8	0.833
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	424237-424284	8	0.833
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7391-7438	10	0.792
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84215-84262	10	0.792
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87125-87172	10	0.792
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229237-229284	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229338-229385	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229439-229486	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239731-239778	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239832-239879	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239933-239980	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15006-15053	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230643-230690	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230744-230791	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230845-230892	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211613-211660	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211714-211761	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211815-211862	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31250-31297	11	0.771
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3371-3418	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4012-4059	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4113-4160	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208980-209027	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3370-3417	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4011-4058	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4112-4159	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219474-219521	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3370-3417	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4011-4058	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4112-4159	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210308-210355	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3370-3417	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4011-4058	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4112-4159	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191263-191310	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	270-317	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	101195-101242	12	0.75
NZ_CP014495_1	1.1\|766073\|48\|NZ_CP014495\|CRISPRCasFinder	766073-766120	48	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	158-205	13	0.729

1. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaac	Protospacer
.* .********************* ****************   *.*

2. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcg-catcaggcaaacagc	CRISPR spacer
aacctgtaggcctgataagacgcgcaagcgtcgccatcaggcatctca-	Protospacer
** *.**************************** *********  . .

3. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

4. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

5. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
attttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtgc	Protospacer
*  ..*******************  ****************    **

6. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

7. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

8. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

9. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

10. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

11. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

12. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctggt	Protospacer
.. .******* ************* ****************  ..*.

13. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

14. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

15. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

16. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

17. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

18. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

19. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
cggctgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
 ..*.*******************  ****************   * .

20. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

21. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

22. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

23. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

24. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

25. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

26. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

27. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

28. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

29. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

30. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

31. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

32. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

33. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

34. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

35. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

36. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
.. ..*******************  ****************   * .

37. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
taatacaaggcctgataagacgcgccagcgtcgcatcaggcgctgaat	Protospacer
 **.   ****************** ***************.   *..

38. spacer 1.1|766073|48|NZ_CP014495|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 13, identity: 0.729

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaatt	Protospacer
.  . *******************. ***************    * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

930808 : 1092488

171

Escherichia_phage(18.69%)

integrase,lysis,head,protease,plate,capsid,transposase,tail,tRNA,portal,terminase,holin

attL 961101:961116|attR 1085364:1085378

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001576601.1\|930808_932047_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.7e-124	52.2
WP_001206970.1\|932456_932666_+	AlpA family phage regulatory protein	A0A2H4JB58	uncultured_Caudovirales_phage	2.2e-16	67.9
WP_072256914.1\|932677_933586_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_001576603.1\|933578_933806_+	hypothetical protein	NA	NA	NA	NA
WP_000770153.1\|933811_934111_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_001576604.1\|934107_935856_+	phage/plasmid primase P4 family domain-containing protein	Q7M2A8	Enterobacteria_phage	3.0e-90	40.3
WP_024187906.1\|936206_936458_+	hypothetical protein	NA	NA	NA	NA
WP_001576606.1\|936454_936880_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_024167808.1\|936896_937145_+	hypothetical protein	NA	NA	NA	NA
WP_001053662.1\|937179_937686_-	hypothetical protein	NA	NA	NA	NA
WP_000733253.1\|937972_939142_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	1.8e-163	76.3
WP_001576607.1\|939196_939757_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	9.8e-88	84.4
WP_000270251.1\|939758_940973_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	2.2e-209	87.3
WP_001576608.1\|940965_941268_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	1.0e-27	60.4
WP_001576609.1\|941267_941708_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.7e-64	75.3
WP_072256913.1\|941691_941877_+	hypothetical protein	NA	NA	NA	NA
WP_000113645.1\|941996_942353_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	9.4e-52	81.4
WP_001576610.1\|942336_943998_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	8.0e-279	82.5
WP_024187907.1\|944003_944288_+	hypothetical protein	NA	NA	NA	NA
WP_000520781.1\|945214_945535_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
WP_000934041.1\|945565_947842_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_001576618.1\|948637_949231_-	hypothetical protein	NA	NA	NA	NA
WP_001576620.1\|949232_949847_-	hypothetical protein	A4JWJ9	Burkholderia_virus	1.3e-24	41.1
WP_001576621.1\|949848_950376_-	hypothetical protein	NA	NA	NA	NA
WP_001576623.1\|950616_950895_-	hypothetical protein	NA	NA	NA	NA
WP_106376849.1\|950891_951236_-	hypothetical protein	NA	NA	NA	NA
WP_001576626.1\|951508_951700_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_073970534.1\|952838_953807_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.7e-180	96.6
WP_001040187.1\|954905_955124_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_001241674.1\|955408_956113_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001202204.1\|956154_957876_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.2e-14	30.8
WP_001043561.1\|957876_959643_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	4.1e-23	24.3
WP_001385255.1\|959765_960731_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.9e-62	44.6
961101:961116	attL	NA	NA	NA	NA
WP_000228473.1\|961274_961769_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
961101:961116	attL	NA	NA	NA	NA
WP_000077041.1\|961903_966010_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_001295343.1\|966168_966780_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000067797.1\|966790_968134_+	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	2.1e-80	40.8
WP_000886683.1\|968224_969517_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_000850306.1\|969755_972200_+	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	6.6e-221	49.8
WP_000213098.1\|972210_972828_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
WP_000534666.1\|972829_973693_+	dimethyl sulfoxide reductase anchor subunit DmsC	NA	NA	NA	NA
WP_000165876.1\|973728_974355_-	hydrolase	NA	NA	NA	NA
WP_000109283.1\|974668_975817_+	MFS transporter	NA	NA	NA	NA
WP_000067979.1\|975913_976711_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	1.3e-21	26.6
WP_000023390.1\|976742_977738_-\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	5.4e-190	100.0
WP_000072552.1\|977831_978143_-	helix-turn-helix transcriptional regulator	Q1JS25	Enterobacteria_phage	4.3e-53	100.0
WP_001576635.1\|978247_978604_+	hypothetical protein	A0A0F7LDH4	Escherichia_phage	2.0e-62	98.3
WP_164907187.1\|978614_978785_+	hypothetical protein	S4TNZ7	Salmonella_phage	1.3e-24	98.2
WP_000217677.1\|978781_979282_+	hypothetical protein	A0A0F7LBQ6	Escherichia_phage	4.5e-92	100.0
WP_001576637.1\|979345_979570_+	DUF2732 family protein	S4TP68	Salmonella_phage	5.2e-32	98.6
WP_001576638.1\|979569_979872_+	DUF5405 family protein	Q7Y4C1	Escherichia_virus	1.6e-44	96.0
WP_001576640.1\|979871_980096_+	TraR/DksA family transcriptional regulator	S4TRY6	Salmonella_phage	1.5e-34	97.3
WP_001576641.1\|980092_980368_+	DUF5405 family protein	U5N3W1	Enterobacteria_phage	1.9e-44	98.9
WP_001576643.1\|980357_982637_+	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	97.9
981115:981130	attR	NA	NA	NA	NA
WP_001576644.1\|983050_984193_+	hypothetical protein	NA	NA	NA	NA
981115:981130	attR	NA	NA	NA	NA
WP_125093550.1\|984224_984701_+	hypothetical protein	NA	NA	NA	NA
WP_001576647.1\|984818_985550_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_001576649.1\|985952_986372_+	hypothetical protein	Q6K1E9	Salmonella_virus	5.7e-56	76.3
WP_001576650.1\|986697_987732_-\|portal	phage portal protein	M1SV64	Escherichia_phage	7.9e-200	98.8
WP_000156861.1\|987731_989504_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
WP_001085955.1\|989677_990532_+\|capsid	GPO family capsid scaffolding protein	Q94MH0	Enterobacteria_phage	5.2e-133	98.2
WP_001576652.1\|990590_991664_+\|capsid	phage major capsid protein, P2 family	Q94MI3	Enterobacteria_phage	2.2e-200	98.9
WP_001576654.1\|991667_992411_+\|terminase	terminase endonuclease subunit	Q858W5	Yersinia_virus	1.6e-125	98.8
WP_000988633.1\|992510_993020_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_000846399.1\|993019_993223_+\|tail	tail protein X	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
WP_000123124.1\|993226_993508_+\|holin	phage holin family protein	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
WP_001576656.1\|993507_994005_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.4e-92	99.4
WP_001576658.1\|994019_994445_+	hypothetical protein	U5N096	Enterobacteria_phage	1.0e-57	96.5
WP_001576659.1\|994432_994858_+\|lysis	LysB family phage lysis regulatory protein	U5N3W5	Enterobacteria_phage	1.5e-64	93.6
WP_000917151.1\|994965_995433_+\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	6.1e-83	100.0
WP_001001786.1\|995425_995878_+	phage virion morphogenesis protein	A0A0F7LDR6	Escherichia_phage	8.2e-77	100.0
WP_001576664.1\|995944_996580_+\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	1.2e-113	99.1
WP_000127163.1\|996576_996924_+	GPW/gp25 family protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_001121498.1\|996928_997837_+\|plate	baseplate assembly protein	U5N3T9	Enterobacteria_phage	1.7e-161	99.7
WP_001576666.1\|997829_998360_+\|tail	phage tail protein I	Q858V5	Yersinia_virus	2.3e-102	99.4
WP_001576670.1\|1000993_1001572_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	3.1e-68	65.4
WP_001576671.1\|1002021_1002399_-	hypothetical protein	NA	NA	NA	NA
WP_001576672.1\|1002841_1003318_+	hypothetical protein	NA	NA	NA	NA
WP_001576673.1\|1003629_1004820_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	3.1e-224	99.2
WP_001251408.1\|1004832_1005351_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001031303.1\|1005407_1005683_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_000785970.1\|1005715_1005835_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_000978911.1\|1008288_1008768_+\|tail	phage tail protein	Q7Y4C7	Escherichia_virus	3.3e-84	98.7
WP_001576679.1\|1008767_1009931_+	phage late control D family protein	Q7Y4C6	Escherichia_virus	5.9e-204	97.4
WP_000468308.1\|1010012_1010231_+	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_001292822.1\|1010550_1012833_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-162	41.5
WP_001295917.1\|1012887_1013745_-	formate transporter FocA	NA	NA	NA	NA
WP_000194832.1\|1014150_1015911_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_000642852.1\|1016040_1016733_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_000057158.1\|1016931_1018020_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.7e-81	46.8
WP_000445240.1\|1018090_1019374_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_001385260.1\|1019543_1020308_+	metallopeptidase YcaL	NA	NA	NA	NA
WP_000125016.1\|1020480_1021164_+	(d)CMP kinase	NA	NA	NA	NA
WP_000140327.1\|1021274_1022948_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_000167336.1\|1023107_1023392_+	integration host factor subunit beta	A7KV42	Bacillus_phage	3.2e-10	40.2
WP_000705731.1\|1023597_1025862_+	ComEC family protein	NA	NA	NA	NA
WP_000551259.1\|1025898_1027647_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	3.3e-57	29.8
WP_000570547.1\|1027643_1028630_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_000056492.1\|1028666_1029899_+	YcaQ family DNA glycosylase	NA	NA	NA	NA
WP_000350057.1\|1029950_1030133_+	protein YcaR	NA	NA	NA	NA
WP_000011610.1\|1030129_1030876_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_000436917.1\|1031029_1031923_+	YcbJ family phosphotransferase	NA	NA	NA	NA
WP_000899600.1\|1031899_1032679_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_001295930.1\|1032814_1033600_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_001288856.1\|1033596_1034919_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_001295931.1\|1034899_1035604_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_000572654.1\|1035603_1040064_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_000925990.1\|1040324_1042172_+	L,D-transpeptidase	NA	NA	NA	NA
WP_001295932.1\|1042352_1042901_+	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	7.0e-06	33.7
WP_001109456.1\|1042927_1043575_+	hydroxyacylglutathione hydrolase GloC	NA	NA	NA	NA
WP_000462681.1\|1043624_1044815_-	aspartate transaminase	NA	NA	NA	NA
WP_000977908.1\|1044999_1046088_-	porin OmpF	Q1MVN1	Enterobacteria_phage	2.8e-99	54.3
WP_000117888.1\|1046690_1048091_-\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	6.9e-82	36.1
WP_001295933.1\|1048259_1049462_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_000193867.1\|1049727_1052340_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	5.3e-19	22.8
WP_001576683.1\|1052723_1053296_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	7.9e-85	84.6
WP_024188925.1\|1053367_1053871_+\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	1.0e-35	48.6
WP_024187909.1\|1053899_1054355_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	6.8e-31	50.0
WP_001576687.1\|1054361_1054976_-\|tail	tail assembly chaperone	Q9MCR5	Enterobacteria_phage	2.3e-61	61.5
WP_072275200.1\|1054975_1056907_-\|tail	tail fiber protein	A0A0K2FIZ6	Escherichia_phage	4.1e-40	44.8
WP_000138756.1\|1056909_1057488_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	1.7e-66	66.8
WP_001576690.1\|1057480_1058584_-\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	6.4e-107	55.2
WP_000859111.1\|1058574_1058922_-	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	5.9e-35	62.4
WP_000148267.1\|1058976_1059573_-\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	1.4e-36	45.7
WP_000808006.1\|1059569_1060724_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	3.2e-85	47.6
WP_000478224.1\|1060711_1060924_-\|tail	tail protein X	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
WP_000458387.1\|1060923_1061808_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	6.8e-51	47.9
WP_059320006.1\|1061807_1065020_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	1.2e-81	31.0
WP_001202894.1\|1065095_1065254_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_000084213.1\|1065177_1065513_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001513983.1\|1065610_1065892_-	hypothetical protein	NA	NA	NA	NA
WP_162832341.1\|1065894_1066419_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.1e-67	66.7
WP_000729834.1\|1066415_1067843_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A4JWK5	Burkholderia_virus	4.5e-214	76.3
WP_000666499.1\|1067832_1068084_-	hypothetical protein	NA	NA	NA	NA
WP_001101804.1\|1068083_1068548_-	Gp37 family protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.7
WP_000271668.1\|1068547_1068994_-	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
WP_000537457.1\|1068995_1069334_-	DUF2190 family protein	NA	NA	NA	NA
WP_001286908.1\|1069343_1070297_-	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-64	43.8
WP_001273074.1\|1070311_1071427_-	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_001576693.1\|1071641_1072100_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	3.4e-30	44.2
WP_000117560.1\|1072102_1072924_-\|capsid	minor capsid protein	A4JWJ6	Burkholderia_virus	1.2e-97	61.2
WP_001576694.1\|1072904_1074401_-	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	2.6e-167	59.6
WP_000533684.1\|1075919_1076462_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	4.9e-44	53.3
WP_000227704.1\|1076464_1076776_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	4.0e-30	60.6
WP_000175097.1\|1076775_1077102_-	membrane protein	Q6QIC4	Burkholderia_phage	9.6e-19	49.5
WP_001299256.1\|1077098_1077710_-	hypothetical protein	A0A0S4L1H0	Pseudomonas_phage	6.9e-10	34.2
WP_001104438.1\|1077738_1078476_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.9e-63	59.5
WP_000793145.1\|1078478_1078829_-\|holin	putative holin	A4JWP3	Burkholderia_virus	9.0e-23	53.9
WP_000194949.1\|1078959_1079703_+	hypothetical protein	NA	NA	NA	NA
WP_001573938.1\|1079678_1080080_-	hypothetical protein	NA	NA	NA	NA
WP_001069609.1\|1080081_1080297_+	hypothetical protein	NA	NA	NA	NA
WP_001573937.1\|1080488_1081253_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	4.0e-100	64.4
WP_032143164.1\|1081369_1081708_-	helix-turn-helix domain-containing protein	F6MII3	Haemophilus_phage	3.7e-05	34.4
WP_000123378.1\|1081808_1081997_+	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	3.9e-17	71.0
WP_000047758.1\|1082049_1082358_+	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	3.5e-23	55.9
WP_000533819.1\|1082368_1083280_+	hypothetical protein	A4JWN3	Burkholderia_virus	2.0e-74	55.3
WP_001529009.1\|1083283_1085053_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	1.6e-229	68.7
WP_000960680.1\|1085063_1086230_+	AAA family ATPase	A4JWN1	Burkholderia_virus	9.7e-122	59.7
WP_001576698.1\|1086232_1086502_+	hypothetical protein	NA	NA	NA	NA
WP_001576700.1\|1086529_1087060_+	host-nuclease inhibitor Gam family protein	L7P7T1	Pseudomonas_phage	1.2e-58	66.7
WP_000632576.1\|1087348_1087621_+	hypothetical protein	NA	NA	NA	NA
WP_001295929.1\|1087630_1087927_+	hypothetical protein	NA	NA	NA	NA
WP_000763553.1\|1087941_1088157_+	hypothetical protein	NA	NA	NA	NA
WP_001576702.1\|1088153_1088837_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	3.8e-33	36.5
WP_000631813.1\|1088833_1089064_+	hypothetical protein	NA	NA	NA	NA
WP_000206212.1\|1089053_1089260_+	hypothetical protein	NA	NA	NA	NA
WP_001576703.1\|1089261_1089711_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	1.4e-23	45.1
WP_001576704.1\|1089682_1090081_+	hypothetical protein	Q6QIE8	Burkholderia_phage	1.0e-30	55.9
WP_000460689.1\|1090195_1090828_+	hypothetical protein	NA	NA	NA	NA
WP_001571575.1\|1090831_1090993_-	hypothetical protein	NA	NA	NA	NA
WP_023363144.1\|1091696_1092488_-	aliphatic sulfonate ABC transporter permease SsuC	G3M9Y4	Bacillus_virus	1.4e-15	24.5

DBSCAN-SWA_2

1260379 : 1328009

Enterobacteria_phage(40.85%)

integrase,lysis,head,capsid,tail,tRNA,portal,terminase,holin

attL 1257413:1257428|attR 1330630:1330645

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1257413:1257428	attL	NA	NA	NA	NA
WP_001576717.1\|1260379_1261498_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z04	Phage_21	7.7e-84	44.4
WP_000003742.1\|1261466_1261736_-	excisionase	NA	NA	NA	NA
WP_001576719.1\|1261797_1264239_-	exonuclease	V5UQJ3	Shigella_phage	3.1e-114	46.9
WP_001070255.1\|1264332_1264524_-	DUF1482 family protein	NA	NA	NA	NA
WP_000854564.1\|1264520_1264709_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001171946.1\|1265277_1265496_-	hypothetical protein	NA	NA	NA	NA
WP_000379575.1\|1265655_1265811_-	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_000362155.1\|1266076_1266496_-	hypothetical protein	K7PK07	Enterobacteria_phage	8.8e-25	65.1
WP_000391949.1\|1266596_1266878_+	helix-turn-helix domain-containing protein	K7PHA1	Enterobacteria_phage	8.5e-24	72.6
WP_000693837.1\|1266861_1267287_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001262379.1\|1267358_1268423_+	hypothetical protein	A0A088CD36	Shigella_phage	7.9e-62	64.6
WP_001151225.1\|1268463_1268886_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	3.3e-64	91.4
WP_000403785.1\|1268943_1269300_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.8e-58	99.2
WP_001224662.1\|1269393_1269576_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.4e-27	100.0
WP_000753059.1\|1269568_1269745_+	hypothetical protein	A0A2R2X2A8	Escherichia_phage	9.7e-26	93.1
WP_000813254.1\|1270666_1270822_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_001429486.1\|1271280_1271559_+	hypothetical protein	I6PCV7	Cronobacter_phage	4.3e-12	48.4
WP_001265034.1\|1271560_1272610_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	2.9e-109	54.6
WP_000904092.1\|1272622_1272979_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.8e-34	61.8
WP_000762890.1\|1272993_1273815_+	antitermination protein	K7P7B9	Enterobacteria_phage	6.1e-78	58.6
WP_000562553.1\|1274707_1274839_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
WP_000871291.1\|1275119_1275455_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_000874243.1\|1275715_1275904_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	7.2e-27	95.2
WP_001327246.1\|1275900_1276062_+	hypothetical protein	Q08JA2	Stx2-converting_phage	2.0e-14	89.1
WP_000372595.1\|1276211_1276427_+\|holin	class II holin family protein	A0A2R2Z340	Escherichia_phage	3.4e-33	98.6
WP_000193296.1\|1276431_1276776_+	YdfR family protein	K7PGU6	Enterobacteria_phage	7.0e-36	92.9
WP_000370546.1\|1276741_1277014_-	hypothetical protein	NA	NA	NA	NA
WP_000992105.1\|1277119_1277653_+	lysozyme	K7PLY1	Enterobacteria_phage	4.8e-100	96.0
WP_001327248.1\|1277649_1278117_+\|lysis	lysis protein	Q9AZ06	Salmonella_phage	5.0e-69	89.7
WP_001139682.1\|1278104_1278257_+	hypothetical protein	Q716B2	Shigella_phage	2.1e-21	100.0
WP_001059340.1\|1278459_1278984_+	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	2.9e-86	93.6
WP_001537735.1\|1279286_1279697_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.7e-55	77.8
WP_000105081.1\|1279754_1279988_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	4.3e-21	94.4
WP_001576724.1\|1280381_1280891_+\|terminase	terminase small subunit	A0A1I9KFT4	Aeromonas_phage	3.6e-12	32.7
WP_001576726.1\|1280862_1282791_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	3.6e-262	66.4
WP_000258993.1\|1282774_1282981_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
WP_000831761.1\|1282977_1284570_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.2e-184	60.9
WP_001576727.1\|1284559_1286065_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.6e-100	53.7
WP_000256835.1\|1286101_1286449_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.9e-21	55.9
WP_000522583.1\|1286506_1287535_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	8.6e-114	61.9
WP_000201498.1\|1287586_1287970_+	hypothetical protein	NA	NA	NA	NA
WP_001204571.1\|1287962_1288316_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.1e-41	70.1
WP_000974995.1\|1288331_1288865_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.2e-55	64.1
WP_000683079.1\|1288861_1289257_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000235037.1\|1289264_1290011_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	8.7e-124	93.4
WP_001299690.1\|1290029_1290461_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	67.4
WP_000533402.1\|1290487_1290901_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_000082402.1\|1290881_1293443_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	90.0
WP_000847298.1\|1293439_1293769_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_001327694.1\|1293768_1294467_+\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	7.6e-130	97.0
WP_001576728.1\|1294472_1295216_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	8.3e-143	93.4
WP_072258937.1\|1295161_1295794_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	1.7e-96	92.3
WP_000514735.1\|1296137_1299830_+	DUF1983 domain-containing protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	85.8
WP_001228261.1\|1299897_1300497_+	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	4.4e-102	92.5
WP_000216560.1\|1300648_1302712_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A1X7QGG5	Escherichia_phage	3.7e-148	62.7
WP_001204582.1\|1302708_1302987_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	1.0e-21	50.5
WP_000355700.1\|1302996_1303290_+	hypothetical protein	NA	NA	NA	NA
WP_071586406.1\|1303329_1303428_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-06	78.1
WP_000742376.1\|1303482_1304139_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937496.1\|1304207_1304474_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.3e-18	78.3
WP_000799406.1\|1304705_1305569_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000531594.1\|1305552_1306689_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
WP_000359446.1\|1306938_1308165_+	peptidase T	NA	NA	NA	NA
WP_001295435.1\|1308213_1309335_-	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_000735412.1\|1309410_1310871_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001265481.1\|1310870_1311542_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000423736.1\|1311710_1313081_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	7.9e-107	44.9
WP_001295971.1\|1313084_1313726_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_001295972.1\|1313761_1314868_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|1314921_1315383_-	phosphatase NudJ	NA	NA	NA	NA
WP_001248677.1\|1315392_1316046_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444487.1\|1316217_1317468_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
WP_000741335.1\|1317581_1318724_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z02	Phage_21	3.6e-206	100.0
WP_000088653.1\|1318713_1318950_-	excisionase	NA	NA	NA	NA
WP_000490213.1\|1319089_1319329_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.7e-39	96.2
WP_000002139.1\|1319312_1319639_-	ASCH domain-containing protein	A5VWB6	Enterobacteria_phage	9.8e-48	95.7
WP_000763374.1\|1319638_1319860_-	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	2.3e-32	93.2
WP_021533932.1\|1319958_1320240_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	3.0e-45	95.7
WP_000548516.1\|1320250_1320442_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	1.8e-25	93.7
WP_000149537.1\|1320414_1320597_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	1.8e-27	98.3
WP_000186848.1\|1320593_1321274_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	1.6e-132	100.0
WP_000100847.1\|1321270_1322056_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995439.1\|1322061_1322358_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_023148105.1\|1322433_1322724_-	hypothetical protein	K7P6H3	Enterobacteria_phage	5.0e-27	85.1
WP_024187901.1\|1323542_1324556_-	hypothetical protein	NA	NA	NA	NA
WP_000858972.1\|1324661_1325351_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	4.7e-92	75.0
WP_001576731.1\|1325455_1325686_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	2.1e-20	66.7
WP_001182889.1\|1325755_1326295_+	toxin YdaT domain-containing protein	M9NZI6	Enterobacteria_phage	4.0e-62	66.7
WP_077459380.1\|1326291_1327311_+	replication protein	M1FN81	Enterobacteria_phage	1.8e-111	68.0
WP_001576733.1\|1327307_1328009_+	replication protein P	A0A0P0ZD31	Stx2-converting_phage	5.1e-126	97.4
1330630:1330645	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1333695 : 1362615

Enterobacteria_phage(65.71%)

lysis,head,capsid,tail,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001053004.1\|1333695_1334151_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	1.2e-59	66.9
WP_000224907.1\|1334150_1334321_+	hypothetical protein	K7P7K0	Enterobacteria_phage	5.3e-13	67.9
WP_000774475.1\|1334313_1334604_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	1.3e-46	93.8
WP_001099697.1\|1334600_1334963_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	7.3e-60	95.7
WP_000971095.1\|1334959_1335100_+	YlcG family protein	K7PHH3	Enterobacteria_phage	1.7e-09	72.1
WP_001204794.1\|1335185_1335569_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	2.0e-55	82.5
WP_000737271.1\|1335757_1336840_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.6e-166	80.1
WP_000839596.1\|1337429_1337645_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_000193273.1\|1337649_1337964_+	YdfR family protein	K7PGU6	Enterobacteria_phage	8.3e-52	99.0
WP_001168526.1\|1337960_1338200_-	hypothetical protein	NA	NA	NA	NA
WP_001101164.1\|1338334_1338868_+	lysozyme	K7PLY1	Enterobacteria_phage	5.8e-98	94.9
WP_001228695.1\|1339084_1339267_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001298464.1\|1339357_1339651_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	7.0e-45	92.8
WP_000830178.1\|1340131_1340458_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_000881610.1\|1340664_1340847_+	hypothetical protein	NA	NA	NA	NA
WP_000453576.1\|1341410_1341956_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	4.7e-95	99.4
WP_001027282.1\|1341930_1343856_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.7
WP_000198149.1\|1343852_1344059_+	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001337540.1\|1344055_1345657_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.4e-309	99.2
WP_000123325.1\|1345637_1346969_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	3.0e-228	96.8
WP_001576736.1\|1346978_1347362_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	7.7e-44	89.7
WP_000118193.1\|1347365_1348391_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	6.4e-186	96.2
WP_000158881.1\|1348432_1348828_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.6e-55	90.9
WP_001576737.1\|1348839_1349193_+\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	1.9e-60	96.6
WP_024188916.1\|1349203_1349782_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	6.8e-76	95.3
WP_001576738.1\|1349778_1350174_+\|tail	phage tail protein	A0A0K2FIF4	Enterobacteria_phage	1.3e-70	99.2
WP_001524522.1\|1350181_1350922_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	1.1e-131	98.8
WP_000479173.1\|1350937_1351360_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.2e-68	95.0
WP_000459452.1\|1351341_1351776_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	7.6e-64	99.2
WP_001576740.1\|1351768_1354336_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	91.9
WP_000847330.1\|1354332_1354662_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	1.6e-58	100.0
WP_001576742.1\|1354661_1355360_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.6e-132	98.7
WP_000194779.1\|1355365_1356109_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.0e-149	97.6
WP_071589399.1\|1356045_1356678_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.2e-96	99.0
WP_001576743.1\|1356738_1360221_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.9
WP_001524535.1\|1360279_1362340_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0E3M194	Enterobacteria_phage	3.3e-125	53.5
WP_000654168.1\|1362336_1362615_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	7.6e-25	57.6

DBSCAN-SWA_4

2007374 : 2095620

103

Escherichia_phage(22.73%)

integrase,plate,capsid,transposase,tail,tRNA,portal,terminase,holin

attL 2053072:2053131|attR 2095682:2095806

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099156434.1\|2007374_2008723_-\|transposase	IS3-like element IS1397 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
WP_000568520.1\|2008832_2009843_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
WP_000580323.1\|2009851_2010463_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_072093883.1\|2010601_2010667_-	stress response small protein YobI	NA	NA	NA	NA
WP_001024911.1\|2010737_2011340_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA
WP_001295503.1\|2011341_2011863_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
WP_000907234.1\|2011897_2012638_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_077249130.1\|2012666_2013119_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_001258676.1\|2013111_2014884_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_000891625.1\|2015193_2015760_+	hydrolase	NA	NA	NA	NA
WP_000639277.1\|2015756_2016575_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.5e-72	99.2
WP_000252980.1\|2016627_2017023_+	MAPEG family protein	NA	NA	NA	NA
WP_000019588.1\|2017063_2017807_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_001576787.1\|2017803_2018775_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_000176764.1\|2018810_2021240_-	trimethylamine N-oxide reductase TorZ	NA	NA	NA	NA
WP_001214293.1\|2021264_2022365_-	NapC/NirT family cytochrome c	NA	NA	NA	NA
WP_001185734.1\|2022752_2023499_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001490174.1\|2023512_2024079_-	VOC family protein	NA	NA	NA	NA
WP_001025326.1\|2024294_2026028_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7
WP_001202076.1\|2026080_2026473_-	flagellar protein FlhE	NA	NA	NA	NA
WP_000066973.1\|2026472_2028551_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_001278946.1\|2028543_2029692_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_001576788.1\|2029880_2030525_-	protein phosphatase CheZ	NA	NA	NA	NA
WP_000763867.1\|2030535_2030925_-	chemotaxis response regulator CheY	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
WP_000036371.1\|2030939_2031989_-	protein-glutamate methylesterase/protein glutamine deamidase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
WP_000204320.1\|2031991_2032852_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_001296146.1\|2033142_2034804_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
WP_000147302.1\|2034948_2035452_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_077874371.1\|2035472_2037437_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_000795641.1\|2037441_2038368_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_000906342.1\|2038364_2039252_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_001291603.1\|2039378_2039957_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_001295647.1\|2039959_2040310_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_000122413.1\|2041089_2041518_+	universal stress protein UspC	NA	NA	NA	NA
WP_001296148.1\|2041524_2042949_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_001296149.1\|2042923_2043724_-	trehalose-phosphatase	NA	NA	NA	NA
WP_000100203.1\|2043890_2044877_-	arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_001187827.1\|2044891_2046406_-	arabinose ABC transporter ATP binding protein AraG	A0A285PWH2	Cedratvirus	1.3e-12	29.7
WP_001576790.1\|2046474_2047464_-	arabinose ABC transporter substrate-binding protein AraF	NA	NA	NA	NA
WP_000179469.1\|2048260_2048764_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_000082127.1\|2048841_2049093_-	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_010723106.1\|2049207_2049294_-	stress response protein AzuC	NA	NA	NA	NA
WP_001237881.1\|2049557_2049881_+	YecR-like lipofamily protein	NA	NA	NA	NA
WP_000917208.1\|2050052_2050550_+	non-heme ferritin	NA	NA	NA	NA
WP_000377224.1\|2050587_2050827_-	YecH family protein	NA	NA	NA	NA
WP_000797555.1\|2051017_2052229_+	tyrosine transporter TyrP	NA	NA	NA	NA
WP_000847882.1\|2052279_2052945_-	UPF0149 family protein YecA	NA	NA	NA	NA
2053072:2053131	attL	NA	NA	NA	NA
WP_001296152.1\|2053416_2053836_-	hypothetical protein	G8C7Q7	Escherichia_phage	1.8e-49	68.8
WP_001531766.1\|2054002_2055046_-	hypothetical protein	R9TNM7	Vibrio_phage	2.0e-33	28.5
WP_001531767.1\|2055049_2055274_-\|tail	tail protein X	NA	NA	NA	NA
WP_001531768.1\|2055435_2055825_-\|tail	phage tail protein	E5FFG4	Burkholderia_phage	1.0e-14	37.9
WP_000444667.1\|2057608_2057890_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000785563.1\|2057902_2058415_-\|tail	phage major tail tube protein	NA	NA	NA	NA
WP_000117510.1\|2058432_2059935_-\|tail	phage tail sheath subtilisin-like domain-containing protein	R9TMQ0	Vibrio_phage	5.5e-69	33.5
WP_000626358.1\|2059931_2060321_-	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	9.4e-05	30.8
WP_001531771.1\|2060320_2061505_-\|tail	phage tail protein	J9QDX3	Clostridium_phage	2.5e-16	35.2
WP_000203868.1\|2061497_2062124_-\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	2.0e-25	38.8
WP_001576796.1\|2062126_2063047_-\|plate	baseplate J/gp47 family protein	D5LGZ3	Escherichia_phage	8.3e-68	47.8
WP_000901289.1\|2063043_2063385_-	GPW/gp25 family protein	D4HTV2	Vibrio_phage	1.1e-20	51.6
WP_000079174.1\|2063387_2064290_-\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_000015612.1\|2064270_2064807_-	hypothetical protein	NA	NA	NA	NA
WP_000774516.1\|2064803_2065484_-	hypothetical protein	NA	NA	NA	NA
WP_001531773.1\|2065515_2065896_-	hypothetical protein	NA	NA	NA	NA
WP_000105179.1\|2065892_2066312_-	DNA-packaging protein	NA	NA	NA	NA
WP_001283997.1\|2066346_2067381_-\|capsid	major capsid protein	A0A2I6TCE5	Escherichia_phage	6.6e-106	56.5
WP_000206292.1\|2067439_2067769_-	hypothetical protein	A0A2R9YJN3	Escherichia_phage	2.0e-08	39.5
WP_001145892.1\|2067768_2069076_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	4.9e-106	53.7
WP_000126513.1\|2069075_2070650_-\|portal	phage portal protein	E4WL21	Enterobacteria_phage	8.6e-190	64.0
WP_000203897.1\|2070646_2070880_-	hypothetical protein	NA	NA	NA	NA
WP_000148195.1\|2070879_2072742_-\|terminase	phage terminase large subunit family protein	A0A1I9KF19	Aeromonas_phage	1.1e-191	53.2
WP_000168117.1\|2072728_2073295_-	hypothetical protein	A0A1I9KFT4	Aeromonas_phage	2.9e-31	46.2
WP_001531775.1\|2073663_2073909_+	hypothetical protein	NA	NA	NA	NA
WP_000734931.1\|2073968_2074163_-	hypothetical protein	NA	NA	NA	NA
WP_000131873.1\|2074170_2074650_-	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	4.6e-62	68.8
WP_000172496.1\|2074649_2074922_-\|holin	phage holin family protein	A0A0A0YPY6	Escherichia_phage	9.8e-09	42.9
WP_001294589.1\|2074921_2075305_-	hypothetical protein	NA	NA	NA	NA
WP_000064384.1\|2075417_2076089_-	antitermination protein	Q7Y3X2	Yersinia_phage	1.9e-16	33.5
WP_000717783.1\|2076088_2076382_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.3e-34	70.5
WP_000057010.1\|2076378_2076975_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.5e-70	64.1
WP_001025459.1\|2077052_2077232_-	hypothetical protein	NA	NA	NA	NA
WP_000847617.1\|2077383_2078025_-	hypothetical protein	NA	NA	NA	NA
WP_000536919.1\|2078268_2078502_+	hypothetical protein	NA	NA	NA	NA
WP_000224749.1\|2078900_2079389_+	ImmA/IrrE family metallo-endopeptidase	A0A142KB62	Gordonia_phage	6.4e-27	42.7
WP_001138663.1\|2079398_2080004_+	hypothetical protein	NA	NA	NA	NA
WP_000536231.1\|2080466_2081165_-	hypothetical protein	Q858R8	Enterobacteria_phage	1.5e-117	91.4
WP_001237642.1\|2082353_2083277_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_001531776.1\|2083451_2084240_-	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	1.1e-39	69.8
WP_000661082.1\|2084921_2085146_-	hypothetical protein	NA	NA	NA	NA
WP_000875806.1\|2085142_2085454_-	hypothetical protein	A0A222YXX1	Escherichia_phage	1.2e-34	65.7
WP_000918616.1\|2085450_2085687_-	hypothetical protein	NA	NA	NA	NA
WP_000214056.1\|2085688_2086099_-	hypothetical protein	NA	NA	NA	NA
WP_000609322.1\|2086137_2087553_-	AAA family ATPase	H9C165	Pectobacterium_phage	6.6e-173	66.7
WP_001023813.1\|2087542_2088298_-	hypothetical protein	H9C164	Pectobacterium_phage	2.4e-41	68.5
WP_000943914.1\|2088294_2088519_-	hypothetical protein	H9C163	Pectobacterium_phage	6.1e-17	54.1
WP_000431205.1\|2088558_2089035_-	hypothetical protein	H9C162	Pectobacterium_phage	1.9e-23	48.6
WP_000360804.1\|2089093_2089324_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	1.5e-21	63.2
WP_001296165.1\|2089422_2089836_+	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.7e-09	49.1
WP_000388260.1\|2090846_2091167_+	hypothetical protein	NA	NA	NA	NA
WP_000151806.1\|2091197_2093414_+	hypothetical protein	H9C157	Pectobacterium_phage	4.7e-101	35.6
WP_000100753.1\|2093410_2093980_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	6.1e-37	49.2
WP_000916334.1\|2093979_2094162_+	hypothetical protein	NA	NA	NA	NA
WP_000833838.1\|2094371_2094635_+	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	1.2e-06	38.0
WP_001531780.1\|2094603_2095620_+\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	1.1e-126	63.6
2095682:2095806	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2217575 : 2288784

Enterobacteria_phage(55.07%)

lysis,integrase,head,protease,transposase,tail,portal,terminase,holin

attL 2233277:2233292|attR 2293822:2293837

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001296203.1\|2217575_2218772_+\|transposase	IS110-like element ISEc20 family transposase	NA	NA	NA	NA
WP_000235219.1\|2218967_2219174_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000813432.1\|2219267_2219870_+	hypothetical protein	NA	NA	NA	NA
WP_001327829.1\|2220343_2220559_+	hypothetical protein	NA	NA	NA	NA
WP_000970353.1\|2220895_2221588_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.7e-118	88.4
WP_000255956.1\|2221587_2222610_-\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-199	99.1
WP_001296206.1\|2224134_2225280_+	hypothetical protein	NA	NA	NA	NA
WP_001163787.1\|2225810_2226068_-	hypothetical protein	NA	NA	NA	NA
WP_000016207.1\|2226121_2226889_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.5e-14	27.9
WP_000217077.1\|2226885_2227944_-	iron ABC transporter permease	NA	NA	NA	NA
WP_000778018.1\|2227962_2228952_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001576800.1\|2228962_2231128_-	TonB-dependent receptor	NA	NA	NA	NA
WP_001069649.1\|2231556_2231991_+	hypothetical protein	NA	NA	NA	NA
WP_001531797.1\|2232208_2234593_+	dynamin family protein	NA	NA	NA	NA
2233277:2233292	attL	NA	NA	NA	NA
WP_000203551.1\|2234589_2235495_+	chemotaxis protein	NA	NA	NA	NA
WP_000102631.1\|2235491_2236562_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_001362823.1\|2236697_2237375_+	hypothetical protein	NA	NA	NA	NA
WP_000846703.1\|2237390_2237801_+	hypothetical protein	NA	NA	NA	NA
WP_001542275.1\|2238021_2238840_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	8.8e-45	38.6
WP_001164966.1\|2238839_2239085_+	hypothetical protein	NA	NA	NA	NA
WP_001542276.1\|2239178_2239652_+	antirestriction protein	A0A2D0W9W4	Bordetella_phage	4.3e-12	33.1
WP_001186200.1\|2239667_2240144_+	RadC family protein	NA	NA	NA	NA
WP_000692345.1\|2240206_2240428_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_000086752.1\|2240446_2241091_+	hypothetical protein	A0A2I6PI07	Pseudomonas_phage	1.8e-24	32.9
WP_001280918.1\|2241106_2241475_+	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000854815.1\|2241563_2241938_+	type IV toxin-antitoxin system toxin CbtA	NA	NA	NA	NA
WP_000988600.1\|2241934_2242129_+	hypothetical protein	NA	NA	NA	NA
WP_001161660.1\|2242141_2242255_+	DUF957 domain-containing protein	NA	NA	NA	NA
WP_001296208.1\|2242743_2242926_+	hypothetical protein	NA	NA	NA	NA
WP_000450409.1\|2243026_2243356_-	DUF496 family protein	NA	NA	NA	NA
WP_001200889.1\|2243527_2244586_-	FUSC family protein	NA	NA	NA	NA
WP_001105368.1\|2244783_2245257_-	DNA gyrase inhibitor SbmC	NA	NA	NA	NA
WP_001296209.1\|2245375_2246542_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	5.9e-228	99.5
WP_125093545.1\|2247381_2249853_-\|tail	tail fiber domain-containing protein	A5VW57	Enterobacteria_phage	7.4e-71	86.1
WP_001576805.1\|2250184_2250436_+	Arc family DNA-binding protein	B8K1J0	Salmonella_phage	1.9e-35	91.6
WP_000757525.1\|2250727_2251093_-	hypothetical protein	A0A192Y6W5	Salmonella_phage	8.1e-67	99.2
WP_001576809.1\|2251130_2251460_+	hypothetical protein	Q9AYY8	Salmonella_phage	1.1e-49	95.4
WP_001576810.1\|2251460_2253629_-	hypothetical protein	Q9AYY9	Salmonella_phage	0.0e+00	94.9
WP_000246980.1\|2253628_2254978_-	DNA transfer protein	Q9AYZ0	Salmonella_phage	4.3e-246	99.3
WP_000964872.1\|2254988_2255681_-	DNA transfer protein	A5VW66	Enterobacteria_phage	5.8e-114	97.8
WP_000614036.1\|2255683_2256139_-	DUF2824 family protein	A5VW67	Enterobacteria_phage	2.6e-86	98.0
WP_001576811.1\|2256138_2257092_-	hypothetical protein	Q716G6	Shigella_phage	1.0e-92	84.5
WP_001576812.1\|2257091_2258510_-	packaged DNA stabilization protein gp10	A0A088CQ70	Enterobacteria_phage	5.4e-276	99.6
WP_001140510.1\|2258519_2258981_-\|head	head DNA stabilization protein	A5VW70	Enterobacteria_phage	7.1e-84	100.0
WP_001576814.1\|2258961_2259150_-	hypothetical protein	A0A088CPR7	Enterobacteria_phage	6.5e-28	98.4
WP_001576816.1\|2259191_2260445_-	hypothetical protein	A0A088CQ56	Enterobacteria_phage	3.7e-236	99.5
WP_001576818.1\|2260463_2261357_-	hypothetical protein	A0A088CPT0	Enterobacteria_phage	1.5e-127	97.6
WP_001576819.1\|2261450_2263646_-\|portal	portal protein	A5VW74	Enterobacteria_phage	0.0e+00	97.0
WP_000200766.1\|2263647_2265063_-\|terminase	PBSX family phage terminase large subunit	A5VW75	Enterobacteria_phage	1.2e-278	99.8
WP_000113732.1\|2265059_2265500_-	hypothetical protein	C7U0V7	Enterobacteria_phage	1.7e-79	99.3
WP_000807785.1\|2265502_2265745_-	DUF2560 family protein	A0A0M4R322	Salmonella_phage	7.5e-37	100.0
WP_001576820.1\|2265992_2266478_-	GIY-YIG nuclease family protein	C6ZR70	Salmonella_phage	1.9e-87	99.4
WP_001139677.1\|2266682_2266835_-	hypothetical protein	A0A088CQ22	Enterobacteria_phage	8.1e-21	98.0
WP_001576821.1\|2266822_2267260_-\|lysis	lysis protein	Q716B4	Shigella_phage	5.5e-70	97.2
WP_000229392.1\|2267256_2267733_-	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	1.7e-88	100.0
WP_000783734.1\|2267716_2268040_-\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
WP_000027554.1\|2268548_2269067_-	DUF1133 family protein	Q716B8	Shigella_phage	5.9e-95	99.4
WP_000994516.1\|2269063_2269252_-	protein ninH	A5VW84	Enterobacteria_phage	5.5e-27	100.0
WP_001008200.1\|2269248_2269611_-	RusA family crossover junction endodeoxyribonuclease	K7P6I9	Enterobacteria_phage	9.2e-63	100.0
WP_000002243.1\|2269607_2269898_-	DUF1364 domain-containing protein	K7PKV0	Enterobacteria_phage	3.4e-52	100.0
WP_001001006.1\|2269890_2270103_-	hypothetical protein	K7PK10	Enterobacteria_phage	3.6e-35	98.6
WP_000950962.1\|2270095_2270272_-	protein ninF	A0A220NRM2	Escherichia_phage	1.9e-26	100.0
WP_001576824.1\|2270264_2270633_-	DUF2591 family protein	A5VW89	Enterobacteria_phage	5.4e-18	47.5
WP_001254220.1\|2270635_2270812_-	NinE family protein	K7PHE6	Enterobacteria_phage	2.7e-28	100.0
WP_001576826.1\|2270808_2271219_-	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	7.4e-69	96.3
WP_000344561.1\|2271221_2271488_-	hypothetical protein	A0A2I6PIG0	Escherichia_phage	1.0e-26	64.8
WP_000049638.1\|2271499_2271700_-	hypothetical protein	Q716C9	Shigella_phage	4.6e-32	100.0
WP_000796282.1\|2271696_2272023_-	hypothetical protein	Q716D0	Shigella_phage	3.3e-59	100.0
WP_001248394.1\|2272095_2273472_-	AAA family ATPase	A0A0P0ZC27	Stx2-converting_phage	2.8e-253	99.6
WP_001576828.1\|2273468_2274356_-	replication protein	A5VW95	Enterobacteria_phage	6.9e-144	99.0
WP_001576829.1\|2274418_2274691_-	hypothetical protein	G9L679	Escherichia_phage	4.6e-43	98.9
WP_000251072.1\|2274713_2275007_-	lambda phage CII family protein	A5VW96	Enterobacteria_phage	1.7e-46	100.0
WP_000437875.1\|2275125_2275326_-	hypothetical protein	A4KWT7	Enterobacteria_phage	4.3e-30	100.0
WP_001274755.1\|2275426_2276140_+	LexA family transcriptional regulator	A4KWS8	Enterobacteria_phage	2.1e-127	100.0
WP_001576830.1\|2276258_2277164_+	hypothetical protein	A4KWU2	Enterobacteria_phage	5.7e-162	94.1
WP_072093907.1\|2277510_2277969_+	antitermination protein N	J3JZZ6	Escherichia_phage	2.4e-55	86.9
WP_001576832.1\|2277980_2278604_+	hypothetical protein	K7PKU5	Enterobacteria_phage	3.3e-108	97.1
WP_001576833.1\|2278667_2279138_+	hypothetical protein	G9L670	Escherichia_phage	1.7e-85	98.1
WP_000065374.1\|2279288_2279657_+	DUF2528 family protein	M1FPD2	Enterobacteria_phage	2.0e-65	100.0
WP_001576834.1\|2279691_2280660_+	hypothetical protein	G5DA88	Enterobacteria_phage	1.7e-55	99.7
WP_000638547.1\|2280684_2280816_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	A5VWA4	Enterobacteria_phage	1.4e-16	100.0
WP_001243355.1\|2280800_2280953_+	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	4.7e-21	100.0
WP_000050554.1\|2281028_2281199_+	hypothetical protein	K7PJW0	Enterobacteria_phage	3.0e-24	100.0
WP_001576835.1\|2281209_2281815_+	ERF family protein	Q9MCQ9	Enterobacteria_phage	9.2e-108	99.5
WP_000951323.1\|2281814_2282198_+	hypothetical protein	K7P6P8	Enterobacteria_phage	8.5e-67	99.2
WP_001111302.1\|2282221_2282515_+	DUF2856 family protein	K7P7E6	Enterobacteria_phage	1.5e-50	99.0
WP_001576836.1\|2282525_2282690_+	DUF2737 family protein	K7P7M6	Enterobacteria_phage	5.5e-23	100.0
WP_001576837.1\|2282686_2283160_+	hypothetical protein	K7PGR4	Enterobacteria_phage	2.9e-56	70.8
WP_001576838.1\|2283156_2283825_+	ead/Ea22-like family protein	A0A077SLK5	Escherichia_phage	2.3e-75	70.7
WP_001576840.1\|2284394_2284679_+	ASCH domain-containing protein	A5VWB6	Enterobacteria_phage	5.9e-49	97.9
WP_001576841.1\|2284751_2284919_+	hypothetical protein	A5VWB7	Enterobacteria_phage	2.9e-27	98.2
WP_001576843.1\|2285258_2285450_+	hypothetical protein	A0A0P0ZBL0	Stx2-converting_phage	9.2e-30	98.4
WP_024188919.1\|2285430_2286609_-\|integrase	site-specific integrase	A0A0P0ZDN8	Stx2-converting_phage	7.5e-231	99.2
WP_001576845.1\|2286790_2288215_+	exodeoxyribonuclease I	NA	NA	NA	NA
WP_001531805.1\|2288325_2288784_-\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	1.2e-11	31.5
2293822:2293837	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2311931 : 2318234

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100793.1\|2311931_2312474_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.0e-50	61.8
WP_000857525.1\|2312478_2313357_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.6e-107	64.5
WP_001023641.1\|2313414_2314314_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	1.7e-28	34.8
WP_000699407.1\|2314313_2315399_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.8e-101	53.9
WP_000183040.1\|2315771_2316665_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	3.0e-46	42.0
WP_001116066.1\|2316839_2318234_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	6.3e-19	33.0

DBSCAN-SWA_7

2412410 : 2421855

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001292786.1\|2412410_2413547_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	6.1e-161	96.7
WP_001296230.1\|2413543_2415547_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001296231.1\|2415671_2416133_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001295430.1\|2416173_2416644_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|2416690_2417410_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|2417406_2419092_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240408.1\|2419313_2420045_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	6.3e-111	98.5
WP_001216963.1\|2420104_2420212_+	protein YohO	NA	NA	NA	NA
WP_000783109.1\|2420192_2420924_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569347.1\|2420928_2421855_-	glycine betaine ABC transporter ATP binding protein YehX	F2Y1V5	Organic_Lake_phycodnavirus	2.6e-08	26.8

DBSCAN-SWA_8

3027084 : 3034224

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000103863.1\|3027084_3029646_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
WP_001141293.1\|3029751_3030408_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	3.3e-50	46.1
WP_001296319.1\|3030458_3031226_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	9.7e-70	57.4
WP_000847996.1\|3031421_3032330_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.9e-117	76.2
WP_000590411.1\|3032326_3033589_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_001279004.1\|3033585_3034224_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	74.5

DBSCAN-SWA_9

3280258 : 3338634

Staphylococcus_phage(25.0%)

integrase,lysis,transposase,tRNA,protease

attL 3300196:3300211|attR 3339033:3339048

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001327406.1\|3280258_3281017_+\|protease	metalloprotease LoiP	NA	NA	NA	NA
WP_000105562.1\|3281220_3282141_-	agmatinase	NA	NA	NA	NA
WP_000758911.1\|3282276_3283008_-	hypothetical protein	NA	NA	NA	NA
WP_001295380.1\|3283153_3285130_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA
WP_001297406.1\|3285138_3285270_-	acid stress response protein YqgB	NA	NA	NA	NA
WP_001331575.1\|3285405_3285621_+	hypothetical protein	NA	NA	NA	NA
WP_001062128.1\|3285924_3287079_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
WP_001112301.1\|3287514_3288909_+	galactose/proton symporter	NA	NA	NA	NA
WP_000858396.1\|3288985_3289483_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_001327408.1\|3289577_3290285_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222509.1\|3290364_3291096_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593261.1\|3291108_3292059_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|3292167_3292731_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017106.1\|3292730_3293147_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001327409.1\|3293320_3294301_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|3294318_3295023_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|3295040_3295607_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|3295603_3295894_+	YggU family protein	NA	NA	NA	NA
WP_001174738.1\|3295901_3296495_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239981.1\|3296487_3297624_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000745192.1\|3297692_3298700_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394106.1\|3298816_3299863_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|3300038_3300758_-	DUF2884 domain-containing protein	NA	NA	NA	NA
3300196:3300211	attL	NA	NA	NA	NA
WP_001107565.1\|3300941_3301268_-	YggL family protein	NA	NA	NA	NA
WP_000786915.1\|3301267_3301987_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001327411.1\|3302147_3303200_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091699.1\|3303227_3303503_+	oxidative damage protection protein	NA	NA	NA	NA
WP_000760323.1\|3303567_3304647_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001327414.1\|3304848_3306105_+	nucleoside permease NupG	NA	NA	NA	NA
WP_000839794.1\|3306153_3308289_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234491.1\|3308687_3309395_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218869.1\|3309773_3311039_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
WP_000147017.1\|3311294_3312338_+	hypothetical protein	NA	NA	NA	NA
WP_001774069.1\|3313836_3314388_+	HTH-type transcriptional regulator PapX	NA	NA	NA	NA
WP_000006213.1\|3317074_3317308_+	major pilus subunit operon transcriptional regulator PapI	NA	NA	NA	NA
WP_001513409.1\|3319175_3319289_-\|lysis	lysis protein	NA	NA	NA	NA
WP_001110186.1\|3321122_3321383_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000109147.1\|3321424_3321985_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001296373.1\|3322024_3322453_+	DUF417 family protein	NA	NA	NA	NA
WP_103103190.1\|3323161_3324389_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.2e-170	95.3
WP_000074472.1\|3324502_3325696_-	MFS transporter	NA	NA	NA	NA
WP_001296374.1\|3325831_3327556_+	aerobactin synthase IucA	NA	NA	NA	NA
WP_001287500.1\|3327556_3328504_+	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001015715.1\|3328503_3330246_+	aerobactin synthase IucC	NA	NA	NA	NA
WP_001576313.1\|3330242_3331520_+	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_000973516.1\|3331601_3333803_+	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_011076574.1\|3334353_3334497_-	hypothetical protein	NA	NA	NA	NA
WP_001034083.1\|3334746_3338634_+\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	1.2e-227	39.0
3339033:3339048	attR	NA	NA	NA	NA

DBSCAN-SWA_10

4739777 : 4744690

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000692349.1\|4739777_4739999_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	2.1e-09	44.4
WP_001186788.1\|4740085_4740562_-	RadC family protein	NA	NA	NA	NA
WP_000849596.1\|4740577_4741063_-	antirestriction protein	A9J566	Pseudomonas_phage	3.4e-12	31.5
WP_001234642.1\|4741117_4741936_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	1.5e-44	38.2
WP_001119719.1\|4742035_4742269_-	DUF905 family protein	NA	NA	NA	NA
WP_001539664.1\|4742354_4742759_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.1e-69	99.3
WP_000612617.1\|4742755_4743103_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	7.5e-62	99.1
WP_061186101.1\|4743151_4744690_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.5e-292	98.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014495

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection