CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014145	Microterricola viridarii strain ERGS5:02 chromosome, complete genome	11 crisprs	DEDDh,WYL,cas3,Cas9_archaeal,csa3	0	2	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014145_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_1

256225-256360

Orphan

Consensus_repeat	Method
TCTCCCGTTGGCTTGAGGGAGCGCTAGCGACCGAAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014145_1

>merge|NZ_CP014145|1|256225-256360|CRISPRCasFinder
TCTCCCGTTGGCTTGAGGGAGCGCTAGCGACCGAAGCCCTGAGCGTCTCCGCAGCGGCTGTGGGGTTTCGACAGGCTCAACCAGCGGGTTTTCGGCCATCTCCCGTTGGCTCGAGGGAGCGCTAGCGACCGAAGCC

>NZ_CP014145|1|1|256225-256360|CRISPRCasFinder
TCTCCCGTTGGCTTGAGGGAGCGCTAGCGACCGAAGCC	CTGAGCGTCTCCGCAGCGGCTGTGGGGTTTCGACAGGCTCAACCAGCGGGTTTTCGGCCA
TCTCCCGTTGGCTCGAGGGAGCGCTAGCGACCGAAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_067225690.1\|257982_259836_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP014145.1\|WP_067225680.1\|254044_254527_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP014145.1\|WP_067225692.1\|259880_260231_+\|holo-ACP-synthase	unknown	unknown	gnl\|CDD\|234610
NZ_CP014145.1\|WP_067225678.1\|253545_253992_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP014145.1\|WP_067225673.1\|250664_251198_+\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
NZ_CP014145.1\|WP_047405457.1\|248632_249007_+\|30S-ribosomal-protein-S13	unknown	unknown	gnl\|CDD\|235358
NZ_CP014145.1\|WP_082717113.1\|262609_263116_+\|ribosomal-protein-S18-alanine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|273701
NZ_CP014145.1\|WP_047405455.1\|248367_248484_+\|50S-ribosomal-protein-L36	unknown	unknown	gnl\|CDD\|376334
NZ_CP014145.1\|WP_067231853.1\|260254_261403_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|143481
NZ_CP014145.1\|WP_067225694.1\|261908_262565_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl\|CDD\|274750
NZ_CP014145.1\|WP_082717114.1\|264417_264936_+\|DUF4190-domain-containing-protein	unknown	unknown	gnl\|CDD\|379388
NZ_CP014145.1\|WP_067231856.1\|263121_264195_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NZ_CP014145.1\|WP_055834620.1\|249608_250598_+\|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl\|CDD\|235359
NZ_CP014145.1\|WP_067225698.1\|264990_266193_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|380115
NZ_CP014145.1\|WP_067225682.1\|254554_255916_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237672
NZ_CP014145.1\|WP_067225676.1\|252433_253324_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|211337
NZ_CP014145.1\|WP_082716689.1\|251312_252383_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|132489
NZ_CP014145.1\|WP_067225684.1\|256945_257899_-\|type-I-pantothenate-kinase	unknown	unknown	gnl\|CDD\|235466
NZ_CP014145.1\|WP_067225671.1\|249049_249448_+\|30S-ribosomal-protein-S11	unknown	unknown	gnl\|CDD\|180007
NZ_CP014145.1\|WP_047405484.1\|266412_266709_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_067225690.1\|257982_259836_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP014145.1\|WP_067225680.1\|254044_254527_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	1.57556e-69
NZ_CP014145.1\|WP_067225692.1\|259880_260231_+\|holo-ACP-synthase	gnl\|CDD\|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	7.98683e-46
NZ_CP014145.1\|WP_067225678.1\|253545_253992_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	9.72735e-98
NZ_CP014145.1\|WP_067225673.1\|250664_251198_+\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	4.14377e-59
NZ_CP014145.1\|WP_047405457.1\|248632_249007_+\|30S-ribosomal-protein-S13	gnl\|CDD\|235358	PRK05179, rpsM, 30S ribosomal protein S13; Validated.	1.09805e-75
NZ_CP014145.1\|WP_082717113.1\|262609_263116_+\|ribosomal-protein-S18-alanine-N-acetyltransferase	gnl\|CDD\|273701	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR\|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].	2.74511e-33
NZ_CP014145.1\|WP_047405455.1\|248367_248484_+\|50S-ribosomal-protein-L36	gnl\|CDD\|376334	pfam00444, Ribosomal_L36, Ribosomal protein L36.	1.14529e-14
NZ_CP014145.1\|WP_067231853.1\|260254_261403_+\|alanine-racemase	gnl\|CDD\|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	1.92218e-148
NZ_CP014145.1\|WP_067225694.1\|261908_262565_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	1.62943e-44
NZ_CP014145.1\|WP_082717114.1\|264417_264936_+\|DUF4190-domain-containing-protein	gnl\|CDD\|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	1.05102e-22
NZ_CP014145.1\|WP_067231856.1\|263121_264195_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	0
NZ_CP014145.1\|WP_055834620.1\|249608_250598_+\|DNA-directed-RNA-polymerase-subunit-alpha	gnl\|CDD\|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	2.84019e-176
NZ_CP014145.1\|WP_067225698.1\|264990_266193_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|380115	pfam18096, Thump_like, THUMP domain-like. This is a domain of unknown function found in bacteria.	3.58101e-19
NZ_CP014145.1\|WP_067225682.1\|254554_255916_+\|phosphoglucosamine-mutase	gnl\|CDD\|237672	PRK14318, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP014145.1\|WP_067225676.1\|252433_253324_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|211337	cd02570, PseudoU_synth_EcTruA, Eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA. This group consists of eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA, Pseudomonas aeruginosa truA and human pseudouridine synthase-like 1 (PUSL1). Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E. coli TruA makes psi38/39 and/or 40 in tRNA. psi38 and psi39 in tRNAs are highly phylogenetically conserved. P. aeruginosa truA is required for induction of type III secretory genes and may act through modifying tRNAs critical for the expression of type III genes or their regulators.	3.41263e-88
NZ_CP014145.1\|WP_082716689.1\|251312_252383_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|132489	TIGR03448, mycothiol_MshD, mycothiol synthase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	2.83729e-14
NZ_CP014145.1\|WP_067225684.1\|256945_257899_-\|type-I-pantothenate-kinase	gnl\|CDD\|235466	PRK05439, PRK05439, pantothenate kinase; Provisional.	0
NZ_CP014145.1\|WP_067225671.1\|249049_249448_+\|30S-ribosomal-protein-S11	gnl\|CDD\|180007	PRK05309, PRK05309, 30S ribosomal protein S11; Validated.	2.28535e-85
NZ_CP014145.1\|WP_047405484.1\|266412_266709_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	4.20557e-50

>NZ_CP014145.1|WP_067225682.1|254554_255916_+|phosphoglucosamine-mutase
MPRLFGTDGVRGLANRELTADLALGLAQAAAAVLTKGHHAEERRASGRRPVAVVARDPRISGEFLTAAVSAGLASSGVDVLDAGVLPTPAAAFLIADIGADFGVMLSASHNPAPDNGIKFFAFGGTKLPDEVEDRIEAYLHKEVLLPTGGDVGRIRRFADAEDRYVLHLLSTLPNRLDGVHVVLDCAHGAASGVSPEVFTMAGARVTLIGADPDGMNINDGVGSTHLDNLAKAVLEHGADVGIAHDGDADRCLAVDSAGNIIDGDQIMAILAVSMKERGHLTNDTLVATVMSNLGLRKAMAANGITMIETKVGDRYVLEELNADKLALGGEQSGHVIMTEYATTGDGVLTGLHLVAEMARTGKSIAELASVMTVFPQILVNVRGVDHTAMHGDEGIADAVRAAEAELGDTGRVLLRPSGTEPMVRVMVEAADQATADRLAHALADVVRERLPL
>NZ_CP014145.1|WP_067225680.1|254044_254527_+|30S-ribosomal-protein-S9
MATIADQIDAPESYSTETPAEAAPKAPRAVLNVGGAAVGRRKQAIARVRLVPGSGTLSVNKREFAEYFPNKLHQQLITDPFKVLDLIGSYDVIAKITGGGPSGQAGALRLAIARALNEIDRENNRAILKKAGFLTRDARVIERKKAGLKKARKASQFSKR
>NZ_CP014145.1|WP_067225678.1|253545_253992_+|50S-ribosomal-protein-L13
MTRTYTPKASEVSRSWVIIDATDVVLGRLASHAAVILRGKNKATFTPHMDMGDFVIIINADKVALTGAKLDQKKAYRHSGYPGGLTAVTYSELLEKNPERAVEKAIRGMLPKNSIGRAQLKKLKVYAGSEHPHAAQQPVPYTLTQVAQ
>NZ_CP014145.1|WP_067225676.1|252433_253324_+|tRNA-pseudouridine(38-40)-synthase-TruA
MSEQFQADGVRIRLDVAYDGTNFNGWGIQPILRTVQGDIESALATILQRNPPTPRLTVAGRTDAGVHATGQVAHLDLTPAQAASVLSPPRGRNARAADTDAAIALARRLNGILGQRGEIVITRASIAPEGFDARFGALWRRYEYRIADADSLRDPLQRTRTTWLPGRHRLEPMEEVAQALCGLHDFAAYCKPKPMATTIRTLQSFSWKRDDDGVLVASLQADAFCHSMVRALVGGCVAVGEGRMSVERMLELRTAGERTAAFKVMPARGLVLTQVGYPDDAALALRAAETRAHRKL
>NZ_CP014145.1|WP_082716689.1|251312_252383_+|GNAT-family-N-acetyltransferase
MSATDTSTSLSPLSQRVGAPTELPAPRHPEVSLWRPATLDDLDGVAALQREIDNADHPDWFTTREEIAANLQADHIDAARDTLVALGPDDAVLAYGVVAEAPGAGERVQVYLLGGVHPLWRDHGIGRELMGWQYARARQRLSASGARLPGWITAFREEANRTAISAALRLGLQVTRYFTTMRRDLDAAIPALVPPQGVRIVPFSAALSAAALEARNDSFRDHWGNQPKSAAWWDRWTQGEVFRADLSWLAVIDEPGVGGATSTRVVGFSLASVNEDDWQAQGLRSVYIDRIGTVRSHRGRGIATACIAATLQSAQRAGLARAILDVDADSPTRAHTLYESLGFRAGERELALVAVF
>NZ_CP014145.1|WP_067225673.1|250664_251198_+|50S-ribosomal-protein-L17
MPKPTKGPRLGGGPAHERLMLANLAAALFTHKSIKTTETKAKRLQPVAERFVTFAKKGDLHARRRVLASIGDKSVVHELFTVIAPQVAERDGGYTRITKLGFRKGDNAPMVQIELVLEPVVAKPKSAKKAAAAAAAEAPVEAPAEAVVETEVVHAEETVEVVEAEATEAPAEEKAAE
>NZ_CP014145.1|WP_055834620.1|249608_250598_+|DNA-directed-RNA-polymerase-subunit-alpha
MLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVLHEFSTVPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKQGAGEVTAADISAPAGVEVHNPELVIATLNDTAKFELELTIERGRGYVSATQNRNEYSEAGQIPVDSIYSPVLKVTYRVEATRAGERTDFDRLVVDVETKSAISPRDAIASAGRTLTELFGLARELNTAAEGIEIGPAPVDAVLSSELSIPIEDLDLSVRSYNCLKREGINNVSELVALSETQLMNIRNFGQKSVDEVKDKLVELGLSLKDSVPGFDGAHFYSGFEDETN
>NZ_CP014145.1|WP_067225671.1|249049_249448_+|30S-ribosomal-protein-S11
MAAPKSAVRKPRKKEKKNVAVGQAHIKSTFNNTIVSITDPSGAVISWASSGAVGFKGSRKSTPFAAQLAAESAARQAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGSINDVTPQAHNGCRPPKRRRV
>NZ_CP014145.1|WP_047405457.1|248632_249007_+|30S-ribosomal-protein-S13
MARLAGVDIPREKRVEIALTYIYGVGRTSALKTLADTEIDGNIRVKDLSDDQLVALRDYIEGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVRGQRTKTNARTRKGPKRTVAGKKKAR
>NZ_CP014145.1|WP_047405455.1|248367_248484_+|50S-ribosomal-protein-L36
MKVNPSVKPICEHCKVIRRNGRVMVICKSNPRHKQRQG
>NZ_CP014145.1|WP_067225684.1|256945_257899_-|type-I-pantothenate-kinase
MAEQRTPINNGHNSPFVELERADWAGLASSTRLPLQETELVQLRGLGEPLNLAEVTEVYLPLSRLLNLYVAGTKQLHRATSDFLGERAATTPFVIGVAGSVAVGKSTIARLLRELLARWEDTPRVELVTTDGFLLPNAELERRGLMERKGFPESYDRRALLRFVSAVKSGAPEVRAPFYSHLSYDIVPDAQITVRQPDVLIVEGLNVLQPPAPGHRLAVSDLFDFTVYVDARTSDIARWYEERFLKLQRGAFSNPKSYFHRYASLTEDEARARARGIWQSINEPNLLQNIRPTRSRASLVLRKDSDHAVSSVLLRKL
>NZ_CP014145.1|WP_067225690.1|257982_259836_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYVGDKKSIEVLVGGLRRLEYRGYDSAGIAVIDDETGALGVSKKSGKLVKLTDELAAHPLGDGSAGIGHTRWATHGGPTDVNAHPHLGDDGKLALIHNGIIENFSELKNELLAEGYGFASETDTEVAAALLGREYRATGDLRTAFQNVVSRLDGAFTLLALHSEEPGLVVGARRNSPLVIGIGEGENFLGSDVAAFVQYTRTAMAVGQDQIVAITPDSVTVTDFAGAPVEVETFEVEWDSAAADKGGWSSFMAKEVAEQPDAVANTLRGRIVDDAVVVPELAAFGDEALAGIRRIVIIACGTAAYAGMTAQYAIEKWARVPVTVELSHEFRYRDPVITDDTLVISISQSGETMDTLMAVKYAREAGARVISICNTQGATIPRESDAVVYTHAGPEVAVASTKAFVAQITALYLFGLHLARVRGSLSVEEQAEQVRELVAIPAKIATVLESSATVAQLAHWMADTRAVLFLGRHVGFPIAMEGALKLKELAYIHAEGFAAGELKHGPIALIEPGQPVFVVVPSPRGSATLHPKVVSNIQEIRARGARVIAIAEEGDAAVLPFADEVVRIPLAAPLFEPLLAVVPLQIFAMELSIAKGLDVDQPRNLAKSVTVE
>NZ_CP014145.1|WP_067225692.1|259880_260231_+|holo-ACP-synthase
MIIGIGVDVVDLARFERAITRTPRLRERLFAESERERSTSSLAARFAAKEALIKALGGPGTLRWHDMEVVNDEHGNPGFALHGATAAEAAARGISRLHLSMSHDAGIATAFVIAEA
>NZ_CP014145.1|WP_067231853.1|260254_261403_+|alanine-racemase
MTENTETAAGSFRAARIDLDAVRRNLGAVRAFVGRDVATAPRVMAVVKANAYGHGALAVAEAAQAAGVDWLGVADIAEALELRRHGITAPILAWLHSPDADFAAAIAAGVSVGVSSPEQLRQVTDAAARLARTASVQLKLDTGLSRNGFPEADWTGAFAVARAAEIAGAISVDGLFSHLSNASPEADAAQCAQFDIGIAAARQAGLAPTLLHIAATAAALTEPAARYTMVRIGIGVYGLSPWGDGLPEGLELTPVMTLAARVAAVRRVVAGTAASYDYTWRAERDTTLALVPLGYADGIPRQASGRASVAINGVQYPVVGRVAMDQFIVDVGDTPVQVGDEVVLFGDPRSGVPSAEDWAEAAGTINYEIVTRIGQRVPRSAR
>NZ_CP014145.1|WP_067225694.1|261908_262565_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MLLAIDTSAGTSVAIVDRDRGVIAERGVADTMRHAEVIGGMIEAVLAESGVARSALSGVVAGMGPGPFTGLRVGIAAARTFALALGRPLVPVVSHDAVAFAHFGGATGSARTAPLLVVTDARRREVYWSAYSGVDELGLPVRLDGPGLAKPDALPAEVEARVFDAPFERLDATEISAGALGMVAELTFAARRPFAADEPLYLRSPDVTPSNGPKRVTR
>NZ_CP014145.1|WP_082717113.1|262609_263116_+|ribosomal-protein-S18-alanine-N-acetyltransferase
MAIENAMFPTDAWSTDAMARDVADPHCYYLVAFPPDAPESIEAYAGLLSPRGAPEADIQTIAVTTAAQGRGLGRVLMLRLIDEARARGAREVFLEVRADNPGAIHLYTSLGFEELGVRRGYYKPDNVDAIVMRLAIPAPQAGLAGTTDHTGTTDNTGTTDPTPLETHS
>NZ_CP014145.1|WP_067231856.1|263121_264195_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MLNRTDPLVLGIETSCDETGIGIVRGTTLLANVIASSMDEHARYGGVVPEVAARAHLEEMSPAITAALDEAGIRLDEIDAVAVTSGPGLAGALMVGVGAAKALAIALDKPIYAVNHLVGHVGADVLATGQDGASEPLQYPTIALLVSGGHTSLLLVRDLTGDVELLGETIDDAAGEAFDKVARVLGLPYPGGPHIDRLAAQGNPKAIRFPRGLTLPKDMAKHRYDFSFSGLKTAVARWVEKAQDAGEEVPVADVAASFREAVVDVLLGKAIAACADHGVPRLLLGGGVVANARVRELAAERCAAAGIELRIPPLSLCTDNGAMIAALGAQLIMAGNEPSSLDFGADSTLPVTDIQVH
>NZ_CP014145.1|WP_082717114.1|264417_264936_+|DUF4190-domain-containing-protein
MTDQNQPPVPPNEPTPPVNPDFTAPEAPAAPPVPPAPNYGAPQAPPAPPYGAPAVPPAPQYAAPAAPQYGAPQYGAPANYGQPGGAPKTNTFAIVSLVASVVGFFTGITFLVGIIFGHIALSQIKKSGENGRGMAIAGLVIGYIGLVLGIILTIALIAIFTTVAVNSPGYSY
>NZ_CP014145.1|WP_067225698.1|264990_266193_-|class-I-SAM-dependent-methyltransferase
MERSELVALLSPEGLRLLDSLPEWDSSADVVRTVAALRKEGHPPELVAAVLSQAKLRAKAAGKFGEFARTMLFTEAGLEQATRLRVAALHAGRFAGAGVQHVADLGCGIGGDALAMAALELRVTAADADEVTATLASFNLAPFPRATVLHARAEEVDLDGLADGPADGVYLDPARRSAGHANTSRLTRPEDYTPSLDFAFGLGQRMPTGVKLGPGFDRELIPTDAEAQWVSVDGALVEMGLWFGALARPGVRRSALLLGRAGSHELTAEADSADAEVGALGAYLYEPDGAVIRARLIGDLARSLDARMLSDGIAYLTADTATETPFATCFRVLEQLPNDEKKLKAALATRGIGTLEIKKRGIDVDPASLRTRLKLKGSGSATIVLTRAAGKHVTLLVERV
>NZ_CP014145.1|WP_047405484.1|266412_266709_+|co-chaperone-GroES
MSVSIKPLEDRIVIKQVEAEQVTASGLVIPDTAKEKPQEGEVVAVGPGRIDDNGNRVPLDVAVGDKVLYSKYGGTEVKFGGEDFLVLSARDVLAVVVR

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Crispr_ID: NZ_CP014145_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_2

674344-674450

Orphan

Consensus_repeat	Method
CCCGCTGATTGAGCCTGTCGAAATCCCCGACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014145_2

>merge|NZ_CP014145|2|674344-674450|CRISPRCasFinder
CCCGCTGATTGAGCCTGTCGAAATCCCCGACGCGCCCGCGGCGCGCCTTCCCTGCCGGGAGCGGCTGCCCGTCTCCCGCTGATTGAGCCTGTCGAAATCCCCGACGC

>NZ_CP014145|2|2|674344-674450|CRISPRCasFinder
CCCGCTGATTGAGCCTGTCGAAATCCCCGACGC	GCCCGCGGCGCGCCTTCCCTGCCGGGAGCGGCTGCCCGTCT
CCCGCTGATTGAGCCTGTCGAAATCCCCGACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_067226608.1\|676706_678449_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_CP014145.1\|WP_067226597.1\|666995_667298_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067226586.1\|662468_662831_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380395
NZ_CP014145.1\|WP_082717129.1\|666500_666983_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP014145.1\|WP_082716732.1\|674477_675680_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|270701
NZ_CP014145.1\|WP_067226602.1\|667675_670951_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_CP014145.1\|WP_067226623.1\|688293_688617_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_162492503.1\|685419_686520_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235334
NZ_CP014145.1\|WP_067226594.1\|666079_666490_-\|lyase	unknown	unknown	gnl\|CDD\|319924
NZ_CP014145.1\|WP_129586781.1\|686916_687216_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|139587
NZ_CP014145.1\|WP_129586780.1\|680913_682011_+\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|226011
NZ_CP014145.1\|WP_082716731.1\|670947_674328_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_CP014145.1\|WP_067226614.1\|682090_685039_+\|UPF0182-family-protein	unknown	unknown	gnl\|CDD\|377101
NZ_CP014145.1\|WP_067226600.1\|667300_667525_-\|DUF3107-domain-containing-protein	unknown	unknown	gnl\|CDD\|378634
NZ_CP014145.1\|WP_067232002.1\|679321_680665_-\|zinc-dependent-metalloprotease	unknown	unknown	gnl\|CDD\|378392
NZ_CP014145.1\|WP_067226620.1\|687673_688297_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_082716733.1\|675678_676710_+\|NAD(+)-diphosphatase	unknown	unknown	gnl\|CDD\|225373
NZ_CP014145.1\|WP_067231997.1\|660703_662353_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP014145.1\|WP_067226591.1\|663994_665713_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|235531
NZ_CP014145.1\|WP_067226588.1\|663234_663963_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|205967

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_067226608.1\|676706_678449_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.78339e-83
NZ_CP014145.1\|WP_067226586.1\|662468_662831_-\|cupin-domain-containing-protein	gnl\|CDD\|380395	cd06990, cupin_DUF861, domain of unknown function DUF 861, cupin domain. This family contains proteins which seem to be specific to bacteria and some fungi. The function of this family is unknown but contains a cupin domain without a metal binding site. Cupins are a functionally diverse superfamily originally discovered based on the highly conserved motif found in germin and germin-like proteins. This conserved motif forms a beta-barrel fold found in all of the cupins, giving rise to the name cupin (cupa is the Latin term for small barrel).	2.78689e-55
NZ_CP014145.1\|WP_082717129.1\|666500_666983_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.36351e-22
NZ_CP014145.1\|WP_082716732.1\|674477_675680_-\|phosphotransferase	gnl\|CDD\|270701	cd05152, MPH2', Macrolide 2'-Phosphotransferase. MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported as a mechanism for bacterial resistance in clinical samples. MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.8367e-48
NZ_CP014145.1\|WP_067226602.1\|667675_670951_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.78398e-26
NZ_CP014145.1\|WP_162492503.1\|685419_686520_-\|hypothetical-protein	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	2.1903e-06
NZ_CP014145.1\|WP_067226594.1\|666079_666490_-\|lyase	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	3.91368e-30
NZ_CP014145.1\|WP_129586781.1\|686916_687216_+\|hypothetical-protein	gnl\|CDD\|139587	PRK13462, PRK13462, acid phosphatase; Provisional.	9.70513e-09
NZ_CP014145.1\|WP_129586780.1\|680913_682011_+\|PDZ-domain-containing-protein	gnl\|CDD\|226011	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms].	1.90887e-65
NZ_CP014145.1\|WP_082716731.1\|670947_674328_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	4.34982e-75
NZ_CP014145.1\|WP_067226614.1\|682090_685039_+\|UPF0182-family-protein	gnl\|CDD\|377101	pfam03699, UPF0182, Uncharacterized protein family (UPF0182). This family contains uncharacterized integral membrane proteins.	0
NZ_CP014145.1\|WP_067226600.1\|667300_667525_-\|DUF3107-domain-containing-protein	gnl\|CDD\|378634	pfam11305, DUF3107, Protein of unknown function (DUF3107). Some members in this family of proteins are annotated as ATP-binding proteins however this cannot be confirmed. Currently no function is known.	1.1251e-28
NZ_CP014145.1\|WP_067232002.1\|679321_680665_-\|zinc-dependent-metalloprotease	gnl\|CDD\|378392	pfam10103, Zincin_2, Zincin-like metallopeptidase. This family of proteins has a conserved HEXXH motif, suggesting they are putative peptidases of zincin fold. The structure of this family has similarity to Peptidase_M1 (pfam01433, Structure 3CMN).	9.772e-122
NZ_CP014145.1\|WP_082716733.1\|675678_676710_+\|NAD(+)-diphosphatase	gnl\|CDD\|225373	COG2816, NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding [DNA replication, recombination, and repair].	1.30275e-70
NZ_CP014145.1\|WP_067231997.1\|660703_662353_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.65753e-145
NZ_CP014145.1\|WP_067226591.1\|663994_665713_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|235531	PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP014145.1\|WP_067226588.1\|663234_663963_+\|hypothetical-protein	gnl\|CDD\|205967	pfam13794, MiaE_2, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like.	4.27323e-16

>NZ_CP014145.1|WP_082716731.1|670947_674328_+|ATP-dependent-helicase
MSETTVENPVENPVETAVDTSLRAAGAGIGAAALALALELPPPTPEQIAVIEAPPGGQAIVVAGAGSGKTETMANRVVWLLANGHAAVPEVLGLTFTRKAAGELAVRIRERVEQLVQAGIADVKIDIFETASVSTYNSFASAIYRENAMLIGREPDAVVLGEASAWQLARQVVSDTADPRLVEIDKRLDAVTGGVLTLSRSLAENVVDVRDVHAMVRDFTDMADLPIGGTGRKKTPHASFTSALEAVGGLPPLLDLAERFQAEKRRRGFVEFSDQVALALEVCERNPAVTAGYRERYKAVLLDEYQDTSVVQTRLLAALFGGHGVMAVGDPDQSIYGWRGASAANLARFSRDFRGSGDDAAEAERFELSISWRNPRAVLAAANEIVRPFTIQEGEAQPGDTPPKSPLTAPSFASDGLLDVSFTETVEDEAAAVAEWFAQRLGQGTGKADGTKRSAAMLCRSLGKISVFTEALRERGVPFHVLGLAGLLDQPVIVDLVSALRVLHDPSRGSELLRVLAGARWNIGPKDLHALGKLAGELAQRDHSLAKLSDEVRARLRGSVADDEGRSIVDALDFLVTAREGHGLVRGFSEVGLARLKEAGDQLIGLRRRAGLELLDLVTLVQQELLLDIEVAANGIRPLGGASLEAFDELVSGFLAASEHSSLGAFLGWLEEAEQRDRLAPRQEEPEPGTVQILTIHGSKGLEWDVVAVPRMVVDEMPGKPRSTLGWLAFAELPFEFKGDAAELPELAWRGVHDQTQFDESVTDFKEQNAAHFAAEQRRLAYVAVTRTKSELLLSGSWWWGQKGARGPSMFLRELAVAGLIDPELLPGSPEEAENPRSEHSVPPEWPLHPLGVRGQAVLNAAALTQTAVDSGSGAPIPERLRAEIDALLEERRRRMQGRAALALPTRIPASRFKDFIADPAAVAEQLRRPMPQRPYRATRLGTLFHSWVEQRSSAVPSGDTLDAGLFELEGIDLDSFGDDAAGDSLFESELVGSELEGTEAEQFARLRATFEASPWAGLAPEDVEVEIHLVLDAQVFICKLDAVYRTAQGYQIVDWKTGKAPKNAADLALKQTQLALYRLAYSRWKGVPVEQIDAVFYFVADDVVIAPEHLAGEHELLELWAGVTA
>NZ_CP014145.1|WP_067226602.1|667675_670951_+|ATP-dependent-helicase
MARTEQKTTAVARAFAARTSAGHPIGADVLDESQRAVLQLPVGATAAVLGAPGSGKTLTLVELVADRVLNQGLAPEQVLVLAPNRLAATRLRDRLAVRLGVPSAGPIARTANSVAFQVVRAASDRPVTLLTGGEQDAIMSELLLGDIIDQAGPDWPHPLGEEVRQMRGFRTELRELSMRCAEYGVSMPRLAELGRAHDHPEWVAAAEFLDGYADNKEQARPGQYDSAELSTEAAVYVARAEAGAAGTLTLGPLAGVRLIAVDDAQDATASTIALLRAFAARGVAIVAFGDPDVASTAFRGARSEVLGRLGEALGVTTSERLVLSTVYRGRPELRALVGVVVDHIGTALAGVQRRAELADSAHSDPGAGGAGAATDRDTDPETETDPASGAGAGRAGYRALVRIEASSHGAECGELARLLREHHLLRGMPWSRMAVVVRSGADIAGLERGLSLSDVPTRAATARRALRDDPAAAQLLAAASLAVGASELTAPAAVQLLTGPLGRLDAIALRRLRLSLRQEELAGDGSRTSDELLVEAMRVPGGFATIDSGPAARAGRAAANLAEATRVAAAGGSIEEVLWQLWQGAGLGTEWGKQAKGTGVLADEANRALDGAVALFAAAQRFVERTPELPPGQFIADVLASDLPEDSLAPQSEGDAVLICTPPGVVGQDFDVVVLAGLQEGVWPNLKPRGSLLHPELVEELASLGAEPAAAGATDERAAVRSDELRMFALAASRAHRQLVLSCTSNDDEQPSTFMGFIPDLTPLHRGRPLHLRGLVGSLRRELVERGTPALASALALLASEEVPGAHPESWYGMREPSTLEPLVDLTEDDAVVAVSPSQIEKAEKSALAWFVDTVAASPGGLAASIGTIVHAVMETASTRPDADLSVEGLWAEAAERWKQLRFDAPWLAEREKRGAERLLGGLSEYLGDFADDGKTLLQAEGRFTVDFEHVSLHGSVDRVERSADGTTVIVDLKTGSRMPTQSGMADHPQLAAYQLGMASGAIPVGSDEGGEAAIGGAKLVFVASGVRGKSYSERTQQPMDEQALEAFRQRLVAVSRSISGARFTGPTQLDFNDPLARWEYRIHLVPAVSA
>NZ_CP014145.1|WP_067226600.1|667300_667525_-|DUF3107-domain-containing-protein
MDIRIGIQNSPREINFETSQPVAEIEAAVSAVLAGEVGFLKLGDDKGNTYIVPATTFAYIEIGTEESRRIGFVG
>NZ_CP014145.1|WP_067226597.1|666995_667298_-|hypothetical-protein
MELLFVALGGAILGTIARYTLPRRAEYGVLVVPAIGTAAAAVVWVALTWLGMAWDSGWIWLISLLAAAAVSYGSALLIGRGREAADERLLAALSAGTATA
>NZ_CP014145.1|WP_082717129.1|666500_666983_-|helix-turn-helix-transcriptional-regulator
MTPQQIENLAQLRRARDLIDRDYAKPLDVPTMAARALMSPAHFSRSFRAAYGETPYGYLMTRRIERAMALLRDGASVTDACFAVGATSLGSFSSRFTEITGETPSAYRKREHGAVQAMPTCIAKAHTRPLRTPSNTNRATITRSAKTSSRIEEARGVAAA
>NZ_CP014145.1|WP_067226594.1|666079_666490_-|lyase
MTISLQFTNVTVTDVDESIAFYSGALGLDVQNDVGSGGHRWVTVGSQAQPGLGIVLSTPYAGRSQADGDALQELLTKGVLPLLVFRTDNVDAMFEAVRASGAEVLQEPMDQQWGPRDCAFRDPSGNTVRISQTPAA
>NZ_CP014145.1|WP_067226591.1|663994_665713_+|long-chain-fatty-acid--CoA-ligase
MTAASVFSSRPWLSSYAEGVPADVDVPKESLVDMIDAAVRTYRASVALEFFGETTTYAEMGEQISRIANALRKLGVRAGDRVALVLPNCPQHIVAFYAVLRLGAVAVEHNPLYTPSELRHQFEDHGASVAIVWDKVHDTVIDFPEDMGVKHVVAVDLTRAMPLLKRIALRLPIKKARESRAALTAQPRAKNALRWEDLLETRKLKKSYPRPMPSDTAVLQYTSGTTGAPKGAILSHANLRVNALQGEAWVPGLRRGEEVVYAVLPMFHAYGLTLCLTFAMGMGARLVLFPKFDEGLVLDAVRSSPPTFLPAVPPIYERLSKAAAKRGVSLGSIRFAISGAMNLPLSTVEAWEKSTGGQLVEGYGMTETSPVAAGNPFGPARRAGTVGVPFPSTQIRVVDPDNPHIDRGVNEAGELLLRGPQVFSGYWNRPEESLAVLLPAADGGGPWLRTGDIVSVSGDGFITIVDRMKELIITGGFNVAPSEVEDALISHESVADAAVVGLPAASGGEIVTAAVVLERGATLDVEALREYCRGRLSAYKVPKQIVAVDELPRSMIGKVLRRQVRAQLSAPQ
>NZ_CP014145.1|WP_067226588.1|663234_663963_+|hypothetical-protein
MVSWFGRSKIRVEIPRLKPRGASSATKVDFAEYTPELLPFLGQAAAMHLEVAENLARALAAAPSVEVKQQISYVAAQVLSTQHKLVAEIRGLHADPDELMRPFVDALVHYRTLATGTDWRELLLTCYLSAGMLGDFFEQLARGIGGDVGNRVASLLATDAGAEQLRELLQRSINAEPTLTSVLAMWGRRLVGDTLLVARSALADAGSPGSAAHHAAEANIEPVFTELIAAHTRRMDGLGLTA
>NZ_CP014145.1|WP_067226586.1|662468_662831_-|cupin-domain-containing-protein
MSSLVRKSLDTPDETRQFTENAGQLQLVTTDTGAVGRATFEPGWRWSQNVKPIVQTDSCQAAHVGYFLSGHMKVVMDDGEEMEYGPGDFATMAPGHDAWIVGDETCVFLDWQGFADYAKG
>NZ_CP014145.1|WP_067231997.1|660703_662353_-|DEAD/DEAH-box-helicase
MTQGRILSERSTTGLKHVTTFSDLTIEQDMVDALASKGIIEPFPIQEQTIPLALTGQDIIGQAKTGTGKTFGFGLPLIQRLGLNPEPGVQALIVVPTRELCVQVAQDLELATSNRATNIVAIYGGKAYEGQIEEIKAGAQIVVGTPGRLLDLASQRLLDLGNVREMVLDEADKMLDLGFLSDIEKLFARTPEGRHTMLFSATMPGPIVALARRFMSKPIHIRATDPNEGLTQANIKHVVYRAHSLDKDEVVARILQAEGRGKTVVFTRTKRAAAKLVEELNDRGFNAAAVHGDLNQDQRERAMAAFKAGKKDILIATDVAARGIDVNDVTHVINHTVPDDHDTYLHRAGRTGRAGKTGIAVTFVDWDDLHKWALINKALEMNQPEPVETYSSSPHLYEDLNIPAGSKGRLKPTPIKEREPREKSADAGRGRREGGRDGGRDDGRTGSRPAAEGAAVGDGATRPSRSRSRTRTRGGEGSTAPAAAASTAATASTGEATAIVTATITDPFQAPGHPASGTHDGGGHEHHDGNSAPRRRSRNRSRRSAPSAE
>NZ_CP014145.1|WP_082716732.1|674477_675680_-|phosphotransferase
MARSPLTLAALATSAVPELDVVATRTHSRQLNGDYDAAVLSIRDGNELIVRVPRNQAAETEQSADLVALRALSTGVRSRLPFHVADFVGQAPVGSTRAVVYQFLDGTPAEPAMLEYSADLAHSVGRSIAAVHSLPTAFIGDAGLPQQSADESRSAAASLIARAADTGRLPAALLRRWEQATDDAALWQFAPSVINGKLAADSFLVDDHGVTAVLGWSELSVGDAARDLHWVLAAPGEAGETTLAAYTAARSGGIDRLLTQRALLYAELELARWLLHGVANRSDDIIADAVQMLDALVEGVHSHSMSPLTQHTGPVLAVDDVEQLLAQTPRSAGSDAPRETPGALHTDSYDLSSFELEGELDSEQVRNSDAQASAVQAAAARTSVLATDDLDTGPIELPGR
>NZ_CP014145.1|WP_082716733.1|675678_676710_+|NAD(+)-diphosphatase
MPSRLGRKQPARLSATPREAAQQTVPKGSPVLTDALPLARYRLERDATARAEPGLVQRLREDADTRVMALSAGTALRAMQVDGAPPALAWLAPDEVPDAANWLYLGREVVADGAAVRPLLAALLTPEQAEALQPERLRWAGLRALAPELDALESALFTEAVSVAHWHDSHRFCPRCGTATVVEKAGWVRRCPAENSEVFPRTDAAVIVRITDADDRILLGSNALWEQNRFSLLAGFVEPGESLEHAVLREVLEESGLRIADPRYLGSQPWPFPASLMLGFSATLASGQAPHDTTPDGEEILELRWFSRAELEAAGDDILLPGPLSIAGAIIRDWLENPEPASR
>NZ_CP014145.1|WP_067226608.1|676706_678449_+|ATP-dependent-helicase
MIPSADALLAGLDEQQRVAAEALIGPVCMLAGAGTGKTRAITHRIAYGVATGAYTPSRVMALTFTTRAAAELRGRLRELGAGGVAARTFHSAALSQLNFFWPQVVGGQTPSLLDGKARLLGHVAERLKLKLDTATLRDVAGEIEWRKVSGLSFAAYGSSLEARGLPGRLTAEQAVDLQHGYEKLKDERHQIDFEDVLLTMAGMIEQEPSVAMQVREQYRFFVVDEYQDVSPLQHQLLNLWVGDRRELCVVGDASQTIYSFAGARAEYLLEFPSRHPDATVVRLEQNYRSTQTIIDAANRLMRGRPGALMLHAAAASEPAVKAPITVTAHPSDMAEARGVAQKIVELIAAGARPEEVAVLYRINVQAAALETALAEAGVSYQIRGSKRFFELPEVKQAVMSLRAASVSISGEPLFKSVSDVLRGLGWSQSPPETRGAVRERWESLNALMGLVDQAAPGTTFRAFTDELMERQASQHEPTVAAVTLATLHSAKGLEWDNVYIIGASEGLVPINYANTPDQIDEERRLLYVGVTRARQRLALSWAETGAGARAPRDRSRFLAEMERPAAPGSRTPGAGSAARS
>NZ_CP014145.1|WP_067232002.1|679321_680665_-|zinc-dependent-metalloprotease
MLRDILSGNFPADGASFDPAQLAGAAGLPNDPASIAALMNQLRGAMSNAGDGINWDLALRRAEEKAAAGQEQVTPEQRAQFDQAFNIAALWLDEVIAISEITVVPSLITRRQWVTQSMPVWTQLAEPVATSIADTLTGALGEQLPEEMRGMLAQAMPMMRSLSGTLFAMQLGEVVGELATEVISGGDIGIPLLPEQHSALLPQNVTAFGEDLDVGIDQVQIYLAVRELAHARLFRHARWLRLHLISAIRSFAQGISVDAGRLEELASGFDPSNPEELRQAMVDGSLIPPKSEAQQAALAQLETMLALIEGWVNVVTAEATSRLPGSVAIAEMVRRRRAAGGPAESAFATLVGLELRPRRQREAAAMWQAVTDAVGNDARDALWAHPDILPTSADLDDPASLVARLVAKASGVEPELDEVDQALEALLRGDGPDRPLDPNDPPAAPPA
>NZ_CP014145.1|WP_129586780.1|680913_682011_+|PDZ-domain-containing-protein
MSRQPRSREERRVRKGWYFLGVAVVSGLVLGLVPAPYVIEQPGPVFDTLGTAEHDGVERPLISIPDEPTYPTEGELNLLTVSVVGNPESRPNWFEVLGAWASPQKAVLPIDLVFPPNVTTTERDQANQAAMVNSQQDAIAAALLNLGYDVGRTLEVNALTTNSPAEGVLEPGDVIVSVNGDTSSDLTDLRAAVKANGTEKPATLEIIRAGQTQTVEVTPTMSGDAVVLGVAIATNYTFPIDVQIQLDNVGGPSAGMMFALGIIDKLTPGPLTAGTDWAGTGTIDDTGTVGPIGGIRQKMFGALDAGSKWFLAPESNCGEVVGHIPDGLTVFSVETLDQALTAIETVSDGGDTSKLPSCTLPASAP
>NZ_CP014145.1|WP_067226614.1|682090_685039_+|UPF0182-family-protein
MTSPAADAPARPNRAPLAITIAVVAGLVMAFFAFASLYADVLWYDQLGYLNVLTTQWVASGVLFVIGFLAMALPVWGAIQIAYRSRPVYAKLNAQLDRYQQVIEPLRRLAMYGVPALLGLFAGVSAASRWETTLMWLNRTPSGTKDPQFGLDVSFYMFDLPFLHSVLGFASAVLLIALILSAATAYLYGAIRVSGREVIISKAARVQIAVMASLYLLLQAASLWLDQYTTLTGSSTYLMAGAGYTDVNATIPGRAILAGIAAVVAILFLVTAIMGRWRLPIIGTVLLIITSLLIGSLYPWVVQRFQVAPSAKTLEAPFIQHNIDMTRDAYGVAGVEEIPYNATTEAEPGALRADAETTANIRILDPAIVSDSFEQLEQFRQYYQFPDHLDVDRYNIDGKSQDAVVAVRDLRLSGLSDAPDWVNRTLVYTHGYGMVAAYGNQRSADGQPVFLESGIPSTGALGAFEPRVYFGEDSPAYSIVGAPKGAKPVELDYPAGGDGGEQTYTSFSGDGGPKLDNIFKKLVFALKFQSEQIFLSDSVTNSSQILYDRSPLERVQKVAPYLTLDSDPYPSVIDGKIVWIVDGYTTSADYPYSTKTSWSKAINDAQTSAQSFALDDVNYVRNSVKATVDAYDGKVTLYAWDTQDPLLATWQKIFPSTVKPLSDVSGELMSHVRYPADMFKLQRAILGQYHVTDAGSFYSSDDAWTTPKEPTLPADNKTLQPPYYLTMQMPGQSSPAFSLYSTFIPDQKGDSTRDVLTGYLAVDADAGAKNGVRADSYGKLRLLTLPNDRIPGPGQVQNSFDSDPAVSQVLNLLKQGQSKVRNGNLLTLPVGGGLLYVQPVYVQSTGGTSFPLLQKVLVGFGNQIAFENTLDEALNVLFGGDSGAQAGDGGTPGGGVTVTPTPTPTPTDGGTTPPTTEPTTPPTTTPPNSGTADEQAKALLEVAKQALQDKQKAMADGDWAAYGAADKKLADTLSALMLVLGQ
>NZ_CP014145.1|WP_162492503.1|685419_686520_-|hypothetical-protein
MGQDSSARSSAVRNGLFDRLPKRAKVGAIAAVAVIVFGAVTIPVAATAVDQHNRQLAHELAEKNAAAEKKAAAEAAEVLKDAKDVAAGFNAGFDGFTISLATAVSADAAAAFEDARVKLADAITNGGVDEVSAAMDAVADALDALVSNAKEQADALIEASPIADVASTDALLKAVANLKGADDVKAAFTQLKAASDAVIASQAAGQAAADAAAAAAAAAAAAAAAAAAAEQDASGSTGGEDSPSGGSSPEVPSNGGASGGYDPAIISMWPAEPFEYCGENPEGQVIVLDFHWGAREGNTVDIFYALTDTDAQATGGFSTAASSQGSSGSVGIPRTCPVGSGTLQYLTIKLVASNANGSATAYYWGL
>NZ_CP014145.1|WP_129586781.1|686916_687216_+|hypothetical-protein
MSIVDPLPNRPAPDNLTGKLILVRHGETEWSKDGKHTGRTDVPRMPRGEALARGDRLRRQWHAGGRCPACASRRSGLCCAPTRHTRLRRIATASEGTLP
>NZ_CP014145.1|WP_067226620.1|687673_688297_-|hypothetical-protein
MNAAAAEPYRYRPTLALPYWDEIGGFIEDAVTDASAITGREPHILFPATTAFVLWAWQARGTPLERTRIFRASVVEEFVHLGVGRYLRGSRATHRATLTLMVRALNPADSLTKQRPIPRSVPTQPYSAAEIAALHSWALGQNTSRRRYDALTLLALGLGAGPATREILELRVSSLDIRGDQPVVIVWESRPRAVGRDRRTSPAQLTA
>NZ_CP014145.1|WP_067226623.1|688293_688617_-|hypothetical-protein
MPAAGDPLRELTDDMAGRYLVTTTSGSRYWLDLDERSLCRIARTDDDETLTLLRDGEKVDLIDVERCEVAQPMVVLVDLHVENVWCTTRESTPVVSIIALSPRAVLQ

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Crispr_ID: NZ_CP014145_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_3

852506-852621

Orphan

Consensus_repeat	Method
CCGCTGGTTGAGCCTGTCGAAACCGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014145_3

>merge|NZ_CP014145|3|852506-852621|CRISPRCasFinder
CCGCTGGTTGAGCCTGTCGAAACCGGGCCCCGGGGTGTTGGCTTCGGTCGCTGGCGCTCCCTCGAGCCAACGGGAGAGTTCGCCCCGCCCGCTGGTTGGGCCTGTCGAAACCGGGC

>NZ_CP014145|3|3|852506-852621|CRISPRCasFinder
CCGCTGGTTGAGCCTGTCGAAACCGGGC	CCCGGGGTGTTGGCTTCGGTCGCTGGCGCTCCCTCGAGCCAACGGGAGAGTTCGCCCCGC
CCGCTGGTTGGGCCTGTCGAAACCGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_067232075.1\|844137_844911_-\|3-oxoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|180371
NZ_CP014145.1\|WP_082716754.1\|862011_863511_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187556
NZ_CP014145.1\|WP_082716752.1\|841727_843263_+\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP014145.1\|WP_129586785.1\|852819_853605_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|376566
NZ_CP014145.1\|WP_067226828.1\|856347_857877_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|225080
NZ_CP014145.1\|WP_067226826.1\|853939_855220_+\|L-fuconate-dehydratase	unknown	unknown	gnl\|CDD\|239440
NZ_CP014145.1\|WP_129586627.1\|864869_865460_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP014145.1\|WP_067232078.1\|850552_850801_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067226832.1\|863605_864829_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|234585
NZ_CP014145.1\|WP_067226823.1\|847083_848451_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP014145.1\|WP_067226820.1\|843359_844121_-\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP014145.1\|WP_082717133.1\|865640_867086_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|184957
NZ_CP014145.1\|WP_067226821.1\|844986_846342_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|365919
NZ_CP014145.1\|WP_067226819.1\|840357_841632_-\|nitrate-reductase	unknown	unknown	gnl\|CDD\|236744
NZ_CP014145.1\|WP_067226822.1\|846338_847097_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|224982
NZ_CP014145.1\|WP_067226827.1\|855287_855959_-\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP014145.1\|WP_067226824.1\|848691_850236_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129986
NZ_CP014145.1\|WP_082716753.1\|860123_861977_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_CP014145.1\|WP_129586626.1\|857909_858563_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067232082.1\|850950_852402_+\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|237031

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_067232075.1\|844137_844911_-\|3-oxoacyl-ACP-reductase	gnl\|CDD\|180371	PRK06057, PRK06057, short chain dehydrogenase; Provisional.	8.20335e-176
NZ_CP014145.1\|WP_082716754.1\|862011_863511_-\|SDR-family-oxidoreductase	gnl\|CDD\|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.18466e-122
NZ_CP014145.1\|WP_082716752.1\|841727_843263_+\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	5.60511e-109
NZ_CP014145.1\|WP_129586785.1\|852819_853605_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|376566	pfam01557, FAA_hydrolase, Fumarylacetoacetate (FAA) hydrolase family. This family consists of fumarylacetoacetate (FAA) hydrolase, or fumarylacetoacetate hydrolase (FAH) and it also includes HHDD isomerase/OPET decarboxylase from E. coli strain W. FAA is the last enzyme in the tyrosine catabolic pathway, it hydrolyzes fumarylacetoacetate into fumarate and acetoacetate which then join the citric acid cycle. Mutations in FAA cause type I tyrosinemia in humans this is an inherited disorder mainly affecting the liver leading to liver cirrhosis, hepatocellular carcinoma, renal tubular damages and neurologic crises amongst other symptoms. The enzymatic defect causes the toxic accumulation of phenylalanine/tyrosine catabolites. The E. coli W enzyme HHDD isomerase/OPET decarboxylase contains two copies of this domain and functions in fourth and fifth steps of the homoprotocatechuate pathway; here it decarboxylates OPET to HHDD and isomerises this to OHED. The final products of this pathway are pyruvic acid and succinic semialdehyde. This family also includes various hydratases and 4-oxalocrotonate decarboxylases which are involved in the bacterial meta-cleavage pathways for degradation of aromatic compounds. 2-hydroxypentadienoic acid hydratase encoded by mhpD in E. coli is involved in the phenylpropionic acid pathway of E. coli and catalyzes the conversion of 2-hydroxy pentadienoate to 4-hydroxy-2-keto-pentanoate and uses a Mn2+ co-factor. OHED hydratase encoded by hpcG in E. coli is involved in the homoprotocatechuic acid (HPC) catabolism. XylI in P. putida is a 4-Oxalocrotonate decarboxylase.	1.77249e-80
NZ_CP014145.1\|WP_067226828.1\|856347_857877_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|225080	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism].	3.6223e-53
NZ_CP014145.1\|WP_067226826.1\|853939_855220_+\|L-fuconate-dehydratase	gnl\|CDD\|239440	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	0
NZ_CP014145.1\|WP_129586627.1\|864869_865460_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.72651e-10
NZ_CP014145.1\|WP_067226832.1\|863605_864829_+\|ferrochelatase	gnl\|CDD\|234585	PRK00035, hemH, ferrochelatase; Reviewed.	4.66923e-124
NZ_CP014145.1\|WP_067226823.1\|847083_848451_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	3.19063e-144
NZ_CP014145.1\|WP_067226820.1\|843359_844121_-\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	2.12107e-30
NZ_CP014145.1\|WP_082717133.1\|865640_867086_+\|MFS-transporter	gnl\|CDD\|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	1.05026e-89
NZ_CP014145.1\|WP_067226821.1\|844986_846342_-\|aldehyde-dehydrogenase	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	1.16122e-179
NZ_CP014145.1\|WP_067226819.1\|840357_841632_-\|nitrate-reductase	gnl\|CDD\|236744	PRK10720, PRK10720, uracil transporter; Provisional.	4.48549e-104
NZ_CP014145.1\|WP_067226822.1\|846338_847097_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|224982	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only].	7.13477e-88
NZ_CP014145.1\|WP_067226827.1\|855287_855959_-\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	1.12742e-47
NZ_CP014145.1\|WP_067226824.1\|848691_850236_+\|amino-acid-permease	gnl\|CDD\|129986	TIGR00908, putative_ethanolamine_permease, ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines].	6.50701e-90
NZ_CP014145.1\|WP_082716753.1\|860123_861977_+\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_CP014145.1\|WP_067232082.1\|850950_852402_+\|aspartate-ammonia-lyase	gnl\|CDD\|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0

>NZ_CP014145.1|WP_067232082.1|850950_852402_+|aspartate-ammonia-lyase
MQASPGFRLESDSLGTVEVPENAYWGVHTKRALDNFPIAKRPISVYPDFVRALAQVKQACARANVEVGALSEEKGRWIDAACTRIIQGARHEEFVVGVIQGGAGTSTNMNANEVITNLALEIAGYEKGRYDILHPIDDVNRSQSTNDTYPTAIKVGLAFSLRHLTLELSLLQDSFSKKSEEFTHVLKVGRTQLQDAVPMTLGQEFHGFATTLGEDYDRLTETLWLLAEVNLGATAIGTGITADPGYAAAAVRHLSEITGLKIESAPDLIESTSDAGAFMSFSGSLKRSAIKLSKICNDLRLLSSGPQAGFGEINLPPMQAGSSIMPGKVNPVIPEAVSQVAYAIAGNDVAITMAAEAGQLQLNAFEPVIAHSLFQGLAWMTQACWTLRVNCVDGITANEDRLEAMVASSVGVITALIPFIGYTEAAKIAKVALSTGHPVADLVVAAGLMSREAVTEQLQPSKLSGMDAAASVLVTDLQGEPSE
>NZ_CP014145.1|WP_067232078.1|850552_850801_+|hypothetical-protein
MSISSLVLGIGSIFAGWTFVMPVAGLVLGILALRREPASRTMAIWGVAVNGVVLLGGLLAGLGALLFGLIALPFAFLPFAMF
>NZ_CP014145.1|WP_067226824.1|848691_850236_+|amino-acid-permease
MSKDTLNVSGVTYTTAEAGYFEKRKLKRSAGVWGLWGLAVAAVISGDFSGWNFGITAAGFGGMLIAFAILVVMYYGLIFSIGEMSSAMPHTGGAYSFSRAAMGPWGGFVTGLAETVEYVATTAVIVYFSAAYADGITSELLNFSMPAWIWWVILYVAFILLNSAGAAISIRFAIVVSIISIGILIVFAVMALASGLFSWDKLFDIVPDAGQSEFLPHGVLPILFALPFAMWFFLGIEELPLAAEESHDPVRDIPRAGLWARGTLIFTGLLVLFLNTGILGAKATGEAGEPLLDGFRAIVGDGLAAVLALFALIGLLASLQGIMFAYGRNMYSLSRAGYYPKFLSLTGKRQTPWVALLAGGLIGFVALVVVDAAGGATGVAGAIVLNIAVWGAVLAYLLQMTAFVILRKKYPNANRPYRSPWGLPGAVSAGIIAALIFVGFLLNPTFGPAIIAIAVVYVVMLIAFAVWGRHRLILSPEEEYAVSGGLHGDPEKDGYGGPLEEELLASDGVDEPSK
>NZ_CP014145.1|WP_067226823.1|847083_848451_-|glutamine-synthetase
MTPRSGNLSLTELTGLVAAGEIDTVILAFTDMQGRLIGKRVAARLFIEDVAEHGAECCNYLLAVDVEMNTVDGYAMSSWEHGYGDMAMIPDFDTLRLVPWLPGSAMVTADLQWLDHTPVVASPRQILKSQLDRLAARGLSPFVGTELEFIVFDESYRQAWAKGYRDLAPASDYNIDYAMLASTRMEPLLRDIRNSMDGAGMYCEGVKGECNLGQQEIAFRYAHALATCDNHSIYKNGAKEIADAHGKSLTFMAKFNEREGNSCHIHISLRDEAGSPVFADKDAEHGMSKMFRHFLAGQLAAMRELTLFFAPNINSYKRFVDGSFAPTAVAWGLDNRTCSLRVVGRGSGMRVENRVPGGDVNQYLAVAALIAAGLHGIENELELEDAFVGNAYTGGAPRVPTSLREAAALFSESTIARAAFGDEVVEHYLNNAAVELAAFDSAVTDWERVRGFERL
>NZ_CP014145.1|WP_067226822.1|846338_847097_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSASDQTPGFSAPVIGITSYLEQAQTGVWDVRAAFLPQVYLDAVTDAGGIAVVLPPQPVTPATARRVLESMDGLIITGGADIDPARYGQAPHSRTGAPRTDRDAWEDALLHAAIETELPFLGICRGAQMLNVALGGTLHQHLPDVVGSEKYQPAPAEFGTEPVRVEPDTTLAGLLGDGLDVHVYHHQALDRVAEGLRVTATSADGVIEAVELPAVPFGVAVQWHPEENAADRRLFAGLVDAAREFRTLKEQS
>NZ_CP014145.1|WP_067226821.1|844986_846342_-|aldehyde-dehydrogenase
MSYTIINPADESVVETVEHLDAEATDAAIARAAVAQRAWAPLAPADKARALRRFAAAVDADIENLAQTEMRNSGHPIGQARWEAGHVRDVLDYYSASPERLFGRQIPVAGGLDVTFNEPLGVVGVITPWNFPMTIAAWGFAPALAAGNAVVLKPAEWTPLTSIRLAELALESGLPEGLFQVLPGRGSVVGERFVTNPTVRKVVFTGSTEVGKQIMAGCADQVKRVTLELGGKSANIVFADSDLEKAAATAPYGVFENAGQDCCARSRILVERSVYERFMELLEPAVQGVAVGDPALESTEMGPLVSRKHLESVAAFVPDDAPVAFRGSAPSGPGYWFAPTVLTPGRGDRSAREEIFGPVVTVLPFDDEADAVQLANDSDYGLSGSIWTRDVGRAIRVARGVESGNLSVNSHSSVRYSTPFGGFKQSGLGRELGPDAPLAFTDTKNVFIAAD
>NZ_CP014145.1|WP_067232075.1|844137_844911_-|3-oxoacyl-ACP-reductase
MNLTQRLAGKVAVITGGASGIGLATAKRFAAEGATVVIGDMDAVTGQAAAELVGGLFVQVNVTDEAQVNNLFDTAAATYGSVDIAFNNAGISPPDDDSIETTELPAWEKVQDVNLKSVYLCSRAALRHMVKQGNGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDQERAQRRLVHIPVGRFAEPEELAAAVAFLASDDSSFITGSTFLVDGGISSAYVTPV
>NZ_CP014145.1|WP_067226820.1|843359_844121_-|FadR-family-transcriptional-regulator
MTDSPDAAQHGLLSAELLLRPGKTANAFEETVQRLLQTIRLGLIAPGEKLPAERELATMLAVSRDTLRDAIASLTEAGYVVPRRGRYGGTFVVDPVPRGTPVVDANGELRERRSVPASEIEDTLVLRNILEVGAVRQAALCELSGVDRERLWQALDDCSAAAPEEYRRHDSRLHLLIAELVGSPSLVPLVADVRMRVNELLDDIPLLAPNIVHSNAQHEAIVKAILRGHPDAAAEAMAEHIAGSEALLRGFLG
>NZ_CP014145.1|WP_082716752.1|841727_843263_+|NCS2-family-permease
MSREPLESTGEITPSEHEEPAISQSTATGTPPSTPPSGLKSRIDSYFEITRRGSNFATEVRGGIVTFVTMAYIVILNPIILSGHADIEGYALGFPQVAAVTALTAGVMTILFGVIARLPFGFAAGLGINSFLAVSVVGQVTWAEAMGLVVINGLIIVLLAATGLRRLIFEAVPIQLKLAITVGIGLFIAFIGLVNAGFVTSTGVASPPVGLGTNGSVATIPTMVFVITLVITGVLVARKVKGALLIGLVGSTIIAVIVEAIFKLGPQFSDAGFNPGGWSLSVPELTGSLVSLPDLSLIGDVSFGSFERIGALAALMLVFTLVFTNFFDAMGTMTGLSNEAKLADKDGNFPRLKSALVVEGIGAVAGGFTSSSSNTVFIESGAGIGEGARTGFANIVTGLMFLVAMFFTPLTSIVPTEVASAALVIVGAMMMTQIKDIDFSEFSVLLPVFLTIAVMPLTYSIANGIGAGFVAWVLIRSLSGKAKGISPLLWIVAAGFLLFFVRGPIEAMLGL
>NZ_CP014145.1|WP_067226819.1|840357_841632_-|nitrate-reductase
MALPWKLHGDGKNVDARTIVAPEERLSWPRTIGLGMQHVVAMFGATFLVPILTGFPPSTTLLFSGVGTILFLLTTRNKLPSYLGSSFAFIAPITAATVGTNYGNALFGIVVVGAMLAIVGLLVQFTGSGWIDSLMPPVVAGAIVALIGFNLAPAAGNNFAQAPLTATITLAAVLLSAVLFKGILGRLSIFVGVVVGYLAAALFGQVDFSKIADAAWIGLPTFAFPTNPFTDPSVLAFLPAFIPVVLVLIAENVGHVRGVAQLTNPGVNKLTGRALLADGVATMLAGSFGGSGTTTYGENIGVMAATRVYSTAAYWVAGIFAILLSLSPKVGAVINTIPAGVLGGVTTALYGLIGIIGVKIWLDNKVDFTNPINQFTAATALIIAIADYTINLGGITFTGIALGTIAAIVVYHGMSAVARLRGTA
>NZ_CP014145.1|WP_129586785.1|852819_853605_-|fumarylacetoacetate-hydrolase-family-protein
MDEAPADLQALIERGEPGLAHVRAVVDQAVAQRVSLTPLDELRHASAVLRPPHILAVGANYAAHASELKLRSETAMTVFALWPNSLTAHEATTTWPGEISQQVDYEAELGVIIGKPAKDVSVRDALDYVWGYTVVNDITARDIQFSEAQWSRCKSFDGFTPTGPVVVTADEVPDPQDLWLTTNVDGHILQDASSGEMVRSVAEIISYLSRSATLPAGTLISTGSPGGAGYSRKPPIFLRDGSTVTVSIGGIGYLTTHCQVI
>NZ_CP014145.1|WP_067226826.1|853939_855220_+|L-fuconate-dehydratase
MSTIISVDTTDVRFPTSLQLDGSDAMNPDPDYSAAYLVIRTDAADGLEGHGFVFTIGRGNDVEVAAIDTLAGHLVGRNVEELLSDMGATSRLFMHDSQLRWLGPEKGVMHMAIGAVINALWDLRAKREGKPLWQLLAALSPEEIVDLVDFRYLTDALTPEEALQILRAAEPGRAEREAELLAKGYPGYTTSPGWLGYSDEKLARLCREAIAEGFTQIKLKVGADLDDDIRRLRIARETCGEGFPIAIDANQRWDVADAIAWVKALEQFDIKWVEEPTSPDDVLGHAAIARGIAPIPVATGEHAQNRIIFKQLLQADAIGFMQIDAARVGGVNENIANLLLAAKFGVPVCPHAGGVGLCEAVQHLSMFDYIAVSGSKEGRVIEFVDHLHEHFVTPVVMQGGSYMAPLAPGAGAEMHAASVAEYSFTR
>NZ_CP014145.1|WP_067226827.1|855287_855959_-|FadR-family-transcriptional-regulator
MAVTDEAILKIKEMIVSGDLGPGDRLPPEKELSEALGLSRSSLREAVKALEVIRVLDVRRGDGTYVTSLEPRLLLEAMSFVVDLHDDASILEIFAVRRILEPAATALAAGKLDPDAIAELKEMIAAVDDTTSVEGLVEHDLEFHRRIVTAAGNSYLSSLIDSLSSHTVRARIWRGVTQENAVDRTLHEHSGIVAALERGDAELAHALTVVHVSGVEQWLREAL
>NZ_CP014145.1|WP_067226828.1|856347_857877_-|DNA-3-methyladenine-glycosylase-2-family-protein
MTQATGEQEAALFAERYRAMSSRDARFDGQFITGVHSTGIYCRPSCPATTPKAVNVSFYLTAAAAHEAGLRACKRCLPDAVPGSPEWNVRDDLAARAMRLIADGEVERSGVPGLAARLGYTPRHLGRVLQQELGAGPLALARAQRAQTARELLVNTLLPLSDIAFAAGFGSVRQFNETVVAVYQQTPSELRLRGARRRSHSPVPSAAATLSADAPMEPGTSVSLRLPARAPFDGAGVFGFLGVRAVAGVETYDGRVYRRALRLPTGTATVALSLDGTPAAPFVRCEATLDELSDLAPLVSRVRRLLDLDADAAAIDAALAADPALAPAVAAVPGIRVPGSMSPEETLFRALIGQQISVAAAHTMLGRLAAALGDRLPVERGGWTLFPTAAQIAAGGRDVLRGPVARIDTIVRVAEALAGGELRLDVGESAEQLMAQLTAMKGIGPWTAGYVAMRVLGSPDVLLTSDLAIRQGAARLGLPDAAAPLAAHGAAWAPWRSYAGMHLWRALAG
>NZ_CP014145.1|WP_129586626.1|857909_858563_-|hypothetical-protein
MTNTQSSVRPTTDVRRAWTIGGALLIAATLFSLAWWPVLLPGEAIGPISTAAHALALLIFTFGLGGTGSVTARRPLGTAALAAFAVLLVASQLFWSTLGTGNDLAGLWMELRLVDSFVQFVVAAIAVILIARAGVVPQPWNWAPGWVLAALAAVWLLSQLIRVNIGAGRGPNPDAQTIALMLSSLDTLLRAVGPVFLGVIAIVLGDRSARTVVSESR
>NZ_CP014145.1|WP_082716753.1|860123_861977_+|proline--tRNA-ligase
MQRYEGGGPACAQPRTLAPHARSAGDKVDAVITRLSNYFLRTLREDPSDAEVTSHRLLVRAGYIRRQAPGVFAWLPLGLRVKEKIERIVREEMNNAGAHEVHFPALLPREPFEITGRWEEYGEGLFRLKDRKGSDMLLAPTHEEAFTLLVKDLYNSYKDLPLSLYQIQDKYRDEARPRAGLLRGREFTMKDAYSFDYTDAGLDKSYQAQRDAYERIFTRLGLEYVIVKADAGAMGGSKSEEFLHPTPIGEDTFVRSAGGYAANVEAFTTLAPAPRSFEKLTPAEVLPTPDTATIQTLVDSANTNHPRPDGRLWTAADTLKNVVLALRYPDGTRELVVVGLPGDREVDQKRAEAAFAPAEVEPANEDDFKANPGLVKGYIGPWSPAGPVLGTESTTGIRYLIDPRVSEGSGWITGANDHGHHVFGLVAGRDFTADGTVEAAEVLAGDPAPDGSGPVELARGMEIGHVFQLGRKYAEALGLKVLDENGKLVTVTMGSYGIGVTRILAIIAELNNDENGLIWPKTVAPFDVHVVATGRDAAVFEAAETVAAALEAAGKDVLFDDRPKVSPGVKFGDAELIGVPTIVIAGRGVAEGVVEIWDRRTGERTPVAISEVVEALS
>NZ_CP014145.1|WP_082716754.1|862011_863511_-|SDR-family-oxidoreductase
MQEQRSILVLGGTGYIGGRLVPRLLEHGHRVRVLARSAQKLTDVPWRERVEVVEGDLLRPADVEAACAGIDVVVYLVHSLSASGSFEQTELQTADNVADAARAAGVKRIVYLGGLHPDSAELSRHLRSRKAVGELFLDSGVPTIALQAGIVIGSGSASFEMIRHLTEVLPYMPAPRWVRNKVQPIAVRDVLHYLLGAVEAPGTINRTFDIGGPDVLRYGQMMNGYAVEAGLPQRPIAALPVFTPWLASQWVNLVTPIPRRLAVPIIESLQYDCVVREHDIDAVIPPPPGGLTGYRRAVRLALAKMRAGEVETSWHGASLDDAPADALPSDPDWAGHTVFIDEKHRTTSAGVDELWSVIEGIGGENGWYSFPLAWAIRGWLDKLVGGVGLDRGRRHTARLQTGDALDFWRVEQIQRGSRLRLRAEMRMPGRGWLELETRDAGDHRVYRQRAVYFPQGLAGRLYWYLLVPFHGVIFTGMANRVVLEAEARTRRNREGGQGA
>NZ_CP014145.1|WP_067226832.1|863605_864829_+|ferrochelatase
MQKSENASPVIGASAAAAAGGEHVEVPVHYDAILLAGFGGPEGQDDVIPFLRNVTRGRGIPEERLEEVATHYRHFGGVSPINDHNRQLKAALEEELGRRGIDLPVLWGNRNWAPYLGEALDEAAERGFTSLIAIATSAYSSYSSCRQYREDLWGALDASGTHGAITIDKVRQFFDHPGFVTPFIEGVDEAVAAFEQEFGAEGIDSAVEVLFATHSIPTADAERSGPRERDFGHGGAYAAQHNAVAEVVMLAVEQRRAERSASRAEAVAAPIPWQLVYQSRSGAPSTPWLEPDINDAIAELPAAGRRGVVVVPLGFVSDHMEVMWDLDNEARETATDNGLSMIRVATPGTQRAFVSGLVDLVLERRDGTPAAERPALTALGPWFDVCRPACCENARLGFRPALAGIAP
>NZ_CP014145.1|WP_129586627.1|864869_865460_-|TetR/AcrR-family-transcriptional-regulator
MTSMDSRYAGRVSTPSPTRDRLLDAFEALLIEQGEKAATLDAVAARAGVSKGGLLYHFGSKDALVTGQLTRLAELATTDVENIRHAPAGSVDYLIRTSVNTDTPLDRAIIAAACLAQGTHPAANEALAALRQQWLAVVEEAVGDPDVAEAILLVSDGLYYNSALANPMPSAGFDPRSAESTQQMDRLLAVLAKLLD
>NZ_CP014145.1|WP_082717133.1|865640_867086_+|MFS-transporter
MLPVLLVSIDNTVLNFALPAISEALQPTGTQLLWMIDIYPLMLAGLLVAMGSLGDRIGRRKLLLIGSAGFGIVSVLAAFAPSIEYLIAARALLGFFGAMLMPSTLSLLRSVFTDREQRRLAVAVWASGFAAGSALGPIVGGFLLEHFTWGSVFLIAVPLLLPLLIMVPLLVPESRDPNPGKIDVASILLSLFTMLPIVLGIKRVAEGGFDLFGAIAVLVGLAAGVLFVRRQKRLETPMLDLELFRRGAFSGAVLINLFSVIALVGGLFFVSQHLQLVLGLSPMNAGLILVPGLVVMIIAGLAVVPIAKRVRPSRLIPAALLISVGGYAAIAVTGGEISALGIAVTFTALGLGIGAAETVSNELILSNVSADKAGAASAVSETAYELGAVLGTAILGTILTASYRAAVELPQGLSAAQQAAAGETLGGAVAVAGELPTDLGAVLLDSARAAFDSGAGMAAWIGAGLVLAAAVIGLTTLRKAS

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Crispr_ID: NZ_CP014145_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_4

1006586-1006720

Orphan

Consensus_repeat	Method
GAGGGGTGCCCCCGGCAGGATTCGAACCTGCGACCAAGAGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014145_4

>merge|NZ_CP014145|4|1006586-1006720|CRISPRCasFinder
GCCCAGTGCCCCCGGCAGGATTCGAACCTGCGACCAAGAGATGAGAAGCACCGCGAGTAGGCGGTGGGAGGGGTGCCCGGCGCTATTTCGAACGAGGGGTGCCCCCGGCAGGATTCGAACCTGCGACCAAGAGAT

>NZ_CP014145|4|4|1006586-1006720|CRISPRCasFinder
GCCCAGTGCCCCCGGCAGGATTCGAACCTGCGACCAAGAGAT	GAGAAGCACCGCGAGTAGGCGGTGGGAGGGGTGCCCGGCGCTATTTCGAAC
GAGGGGTGCCCCCGGCAGGATTCGAACCTGCGACCAAGAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_160329718.1\|996829_997741_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224600
NZ_CP014145.1\|WP_067226925.1\|1008526_1008760_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_082716778.1\|1003547_1005869_-\|cellulase-family-glycosylhydrolase	unknown	unknown	gnl\|CDD\|365907
NZ_CP014145.1\|WP_129586635.1\|1012151_1013891_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227699
NZ_CP014145.1\|WP_067226923.1\|1006971_1007826_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|227308
NZ_CP014145.1\|WP_067226916.1\|995081_995864_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP014145.1\|WP_067226917.1\|996488_996884_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_129586634.1\|1010721_1012164_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_082716777.1\|1002550_1003618_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP014145.1\|WP_082717140.1\|993615_995085_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP014145.1\|WP_067226929.1\|1010198_1010711_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067226919.1\|997855_999274_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|367155
NZ_CP014145.1\|WP_067226922.1\|1005998_1006556_-\|nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|235538
NZ_CP014145.1\|WP_160329717.1\|995883_996480_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|235825
NZ_CP014145.1\|WP_067226920.1\|999900_1001493_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP014145.1\|WP_067226924.1\|1007948_1008350_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067226927.1\|1008991_1009792_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067226928.1\|1009788_1010199_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP014145.1\|WP_067226932.1\|1014290_1014647_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067226926.1\|1008756_1008990_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_160329718.1\|996829_997741_-\|hypothetical-protein	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	1.00103e-19
NZ_CP014145.1\|WP_082716778.1\|1003547_1005869_-\|cellulase-family-glycosylhydrolase	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	1.17008e-21
NZ_CP014145.1\|WP_067226923.1\|1006971_1007826_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|227308	COG4974, XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair].	1.04115e-12
NZ_CP014145.1\|WP_067226916.1\|995081_995864_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.03562e-26
NZ_CP014145.1\|WP_082716777.1\|1002550_1003618_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	6.62614e-21
NZ_CP014145.1\|WP_082717140.1\|993615_995085_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	3.69102e-79
NZ_CP014145.1\|WP_067226919.1\|997855_999274_-\|HNH-endonuclease	gnl\|CDD\|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	4.12811e-15
NZ_CP014145.1\|WP_067226922.1\|1005998_1006556_-\|nucleoside-phosphorylase	gnl\|CDD\|235538	PRK05634, PRK05634, nucleosidase; Provisional.	2.96012e-31
NZ_CP014145.1\|WP_160329717.1\|995883_996480_+\|ATP-binding-protein	gnl\|CDD\|235825	PRK06547, PRK06547, hypothetical protein; Provisional.	8.56346e-38
NZ_CP014145.1\|WP_067226920.1\|999900_1001493_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	1.43125e-158
NZ_CP014145.1\|WP_067226928.1\|1009788_1010199_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	3.35336e-28
NZ_CP014145.1\|WP_129586635.1\|1012151_1013891_-\|hypothetical-protein	gnl\|CDD\|227699	COG5412, COG5412, Phage-related protein [Function unknown].	0.00522672

>NZ_CP014145.1|WP_067226922.1|1005998_1006556_-|nucleoside-phosphorylase
MKLLVAALEAELSAFPAELPGFDRLVTGPGKLQATFALTRALDAGDYDEILVVGTAGAINPLLSASVYDVDAAIQHDVTDVDGIVGQHVSLPTRVETGREGITIATGDHFVDDEEAVRVILPLGAGLVDMETYAYIWVAAQFGVPIRVLKSVSDRAQDGAITDWRATVAACSAQLRETVRAEYGV
>NZ_CP014145.1|WP_082716778.1|1003547_1005869_-|cellulase-family-glycosylhydrolase
MKSVRRPVVALSTMLTLVLIQAVADPTGLLALVGWSGAIPSFDAGLWSFAPYLVFLPVLLVALWWVSARAGEWFWTLTAGIVLAVLLAQSATAFVMTWDLAAAGSAASFVAGKAIPAALIVAALTRWLGGPVSRRRLEPGPVWPPAVLFAGLAPLLAGLWWTGAAYAPGIPAARPDRGLLSVVIALALIAGATALSLRWMRSRVPGVLGGWLAALLAGGLVGLVQAVIGFAVDGGLSGDMWPLMVAYIAVADGLAFGACVGWIVGIGAVVTDRVAEGRAARAPQVAVAAVAAFALVATLVLPGGNSASAEAAPPAGMLRASASVITDGNGNQVLLRGVNVNNLVDFYQPRPDVPATTPLSEADFAGMAGYGFNVARLNISWSALEPERGTLDPAYLAQIGDAVGWAKKYGIYTVIDMHQDGWWNGPTEEGTTCRPGTETMWGYDGAPEWATITDGAPRCQFTGRDISPAGNRAFQNFYFDTNGVQTALAETWGKLAATFADEPMVAGFDLLNEPGFGETAPVTTSHQLASFYGQAIDRIRAAGAEQIMFVEPSIFWSGLGFDTGPTPGFTDDRNIVFSPHLYAESITMDRSLGIPAIVSLERQFTLGQRVAADLGAPLWSGEYGYWGEDDDVLARLVRYADAEDAHMLGSAYWVWKQACGDPQNGIQPVGNALMMQNCDGSGELPPKTELLDILSRAYPQAAPGVLTALEADGARLQLSGNTTERSCGLRLWVPGSAKPAVDVTGVTELEITSVPGGWSVTGCADGDYTVSTR
>NZ_CP014145.1|WP_082716777.1|1002550_1003618_+|DMT-family-transporter
MCQNKSIVLHCSVCQHGLVTVNLLKFNRPLAAGLVVVLLWSSAFPAIRVAAPGLGVVGLSFARLLIATLALLLVAVLAKARLPRARDLGWITACGFFGMAAYQLLLNWGELHVPAGTASIIVAAAPLVSVGVARVLFAERISPATILGSAIALGGVAFVCLARAGVSLSASVWIVVAAMVVQGIYHPLQRPLLQRYTSLEVACYAMVAGTVMTLPLVPFDLGTMLGAGAGPWLAAAYLGLLPSALGFVLWAYAVARMPVAISTSLLYLVPPVAVLISWLWLGELPVPAELLGGVVVILGVLIIARARKRAPERPPRELRTRAPASRARPAAAATGWTRCSRRRRSRSRSTRPAPR
>NZ_CP014145.1|WP_067226920.1|999900_1001493_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSLIRLHDVAVRFENTQILREAFLRLETGERIGLIGKNGSGKSTILKLVLEQVSPDVGTVTLEQGVKIGYFSQFSELDGASTILEVLDELFAHVTEIEAELAEIDGAIAAGPDADELDRLIHRQAELFEQMDHVDGWDYKRHIDTALTTLGFNEAHRTSPIDQLSGGWRNRAALAKILLERPDVLLLDEPTNYLDVAGVEWLESWFRDFRGAAIIVSHDRKFLDSVVTRIVELENFHLHEYPGNFGEYVVQKQFRLKNLASQFQHESELLAFESEGIADRREAAKANSKALGRQLASVKKSRAPRPVDEIITEIYRSLHVKDVLCRVEGIGKSYGERTLFDDLSFEIRRGNRFVVLGANGSGKSTLLKVLTGEEKPDAGRVNWAGGVSFVSYNQMLDELDPEDTVSHAVNALPGSLAFAATRKSVNRFLAMFQFSEADLKQKIGALSGGQRARVAMAQCLLSGASVLLLDEPTNHLDMSSTQVMERALVHFPGAIVTVSHDRFFSDKIANRYLVFGDSAAAPAAVAVRAA
>NZ_CP014145.1|WP_067226919.1|997855_999274_-|HNH-endonuclease
MRTASQDLSKEVAAAQAELAATLADLDERMLRDDALLELTATVEAAGRVVDALRLKTAGEVAFRSRRELGEDRLSAQKGCRNGVELLARITLASERTLTQRMRVGEATRPRTALTGDTLPAAFPAASAALRAGTLGYDSALAIIDTLAPIRARVGDLNLERAEHALVAAATGPTVESPLPFAADEVRGQARVWESVLDPDGTEPAEERAMNARGISAGLTRDGLVHRKMALLPEIDAKFETLLNAYLNPRSKPTFTDPDPDAPKDPRATAQARHDVFASLIDGAARSADAPRIGGAAPTVLVSVRQADLDQRCGSGFIEGCDAALSMAAVEQLVCAGGLQHALIGDDGRLVSLSTTDRVFNAQQRRAITLRDGGCIIPGCTIPAAWSEIHHVIAHRDGGETDVCNGVLLCWFHHRTIETSGWQILMIDGVPHVKPPPWLRNGRSDADTPWRRSTKSRTQLADLLERQPVLVE
>NZ_CP014145.1|WP_160329718.1|996829_997741_-|hypothetical-protein
MATFRVGRFFGVLVGTVAILAAGVYAPATLLGPLPPASASPVSELPGSTDSAAPVLAADGASAVILAGDTAPFALGGSAEALPMASITKLVTALVVLDSKPLAADQSGETHTIATPDYQDYIDYSGGGARTVVVFPKEQWTQREMLQALILGSSNNHADTLARWAYGSVDDYLTAANAWLAKKGLDGITVADTTGLSPDSRGTAADVTRLAALALAEPAIAEILANPPSALVNNRGVSNTTAYLADEGVTGISRSYTDEAGVCLLFTATVPPQRAASPPGRSASRRCSSARPTTTRSRPTCVR
>NZ_CP014145.1|WP_067226917.1|996488_996884_-|hypothetical-protein
MFLGSPDYDTLEADVRALIASAEGGAGTVPLIEKGASYGEFTTPWGATASAVAMTAQQRRAWAAQDASLQVELDDLSTAPLGTIVGSVSVSTPAGEQRSRLQLDRAIVDPGPGWRLMNPVPMIGALLASMK
>NZ_CP014145.1|WP_160329717.1|995883_996480_+|ATP-binding-protein
MPAGPAPAGSVPTGSVPAAEPDIGPILAAIARAPRNAVVLIDGPSGAGKSTLADRLLAAWPTDAVPQLLRLDDVYPGWGGLAAGAELVLNGLLHARTAGHSAGWRRWDWASLAQAEWHAVAPDRPVIVEGCGSLVGDAARHAAVTVWISADDAVRKRRALERDAGGFDAHWDEWQAQWERYEELEQPRQRAGIVLEAG
>NZ_CP014145.1|WP_067226916.1|995081_995864_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MSVLAPVATGSALGRLNPVAKIAATIPITLALVLTLDWVSATVALLLELLLLSIGGLGRVVFSARTLPVWLAAPLTGFSMVLYGQASGETYLQFWLIHVTEGSIAIGIATCMRVLAIALPAVVLFVTIDPTELADGLAQVAKLPSRFVLGALAALRLVGLFIDDWRSLQLARRARGVADRGLLRRLLGQAFALLVLSIRRGSKLATAMEARGFGGHTRRSWARPSEFGGAEWVAVALGCAVAAAAVGVAVATESWNFVLS
>NZ_CP014145.1|WP_082717140.1|993615_995085_+|ATP-binding-cassette-domain-containing-protein
MQQGAARVDVQGWGWRHAGRSSWAVADAEFTIEPGERVLLLGASGAGKSTLLHGLAGVLGGDEEGEHRGSLLIDGMPAASARGRSGLVLQDPDSQVILARVGDDVAFGCENLGLPREEIWRRVGEALDAVGLDVPLERSTSALSGGQKQRLALAGVLAMRPGLLLLDEPTANLDPAGVAEVQQAVARVLQDRAATLVVVEHRVDVWLPLVDRVIVLAAGGGVLADGEPQQVLNEQGAVLAAAGVWVPGHPPAIPERNRVAHAEPLLQARELAVARVPRHPVASGIDLELRAGRALALTGPNGAGKSTLALTLAGLLSPAGGTLHAHDGLAAGAGTSPIRWKSRQLLGRIGTVFQDPEHQFLTARVRDELAVGPKALGRSASETAAVTDELLQRLRLGHLVDANPFTLSGGEKRRLSVATVLAARPRLLVLDEPTFGQDARTWAELLALLAGLVDEGHAIVAVTHDAAFVRALADEEYALAPAAEQVVPR
>NZ_CP014145.1|WP_067226923.1|1006971_1007826_+|tyrosine-type-recombinase/integrase
MIDADYIRYYAQYQAAQGCSAATIREREILVRALLARTERTLDTITRHDLIGDLGRPLAAKTKQNYKSFFHTFFTWMQDEGFRADNPGARLPRVRVPKQDPNPLRTADIEQLLHSGIYGKTRLYVLLYAYQGFRCVEIAAVAGETVDWRRKRILSKDGKGGREVWRPIHPLVWDEIQKYPRAGVFFPSPTNAGHVGRKNVSNVLSKALKRAGIVGHRPHQLRVWQGTALLEGGVPTTTAAALLRHSDLQSIAAYQLVSERLLEEAQNVLPLVKVPTSSGRRRAA
>NZ_CP014145.1|WP_067226924.1|1007948_1008350_+|hypothetical-protein
MLSAASAVLLAASLAGCSASGGDGRECQTVPADLLERIALGSSGDALTPVAGGAVASASFDDAYIVAMEFEVPGNDNQVGAWAVGSLEDGATTVLAVDGLAQQFTQWPSEINGEKLDVREDGVTEAKACLEQG
>NZ_CP014145.1|WP_067226925.1|1008526_1008760_-|hypothetical-protein
MSHAAPDKTAPDLLGLTGRRVLYALSILGAVAAPFVAVGAPEWAPAVVTATGVLTVAAGGAALANPSRVPRTSRRAK
>NZ_CP014145.1|WP_067226926.1|1008756_1008990_-|hypothetical-protein
MDSAITIIVALIAVSGGWAAARFGRVSRLEKRITQLEARERRMWVYCRTLIDHGYRHGDGTPMPPPPEDLYGEDTTP
>NZ_CP014145.1|WP_067226927.1|1008991_1009792_-|hypothetical-protein
MTTRQSFILTAQLTLGAPSPLNTCVSQGVAAWAAAAGLPYPDRAFSAEDVAAALGTNYGGPKRTTAHVTAIATAARLGLDGYRWIAAADARPGDWLVWPDYDHITVLFDGPEHALRSIGAGGPTGIVNYQPQGGGGNPASYFLGAIRPPFAADPAPAPAPTELPRTSTEEDGQPGSVFYARLQLWGALYGGYEGPIDGDMGANSWAAVQVNLARESGYTGPLDGAPGANTYKAMQRWAARYGYTGPVDGDLGPNSYRAIARALNTL
>NZ_CP014145.1|WP_067226928.1|1009788_1010199_-|M23-family-metallopeptidase
MPTRLRPFPARRISSPYGWRCRPGSTTKSFHLGTDYQVPGGTAVRACEAGTVSDVRYDAASGHTITILHAGGWSTKYHHLRHEASVAVGQPVDAGQVIGYVGHTGTAAHGDHLHLEAWRNGRHADPETYFEEVDTP
>NZ_CP014145.1|WP_067226929.1|1010198_1010711_-|hypothetical-protein
MGKLKTPIYGITYPDGDAPMFELPADLATLAQTIEDALSMAAVPPRLAISNVGSTVASIPIAPAAALELPNIRIAFKLNAPTKMAFGWGGMLKASAAASTGVNVNLLLDGVLIQSYWVQCPGTDFQTWNRRAANRVVPAGDHTLTLSVQSGAGTTTHRVEGFYVEGFAVI
>NZ_CP014145.1|WP_129586634.1|1010721_1012164_-|hypothetical-protein
MATVRELQRPRVLIDGAEVPSSWTGHDRVGLEALAIKWGRAKLYDKPKPSILTMTVIDPVGRWAASIAAAAPEIIVHTSSDVGLPEPVQLVHFRGVVESVTIEPVTLQHPTDGTPMAVWRAEITAVDPLAALAGARPAGPYWDTAAGAFGVWGNANMTVRFDHLRAAGMLALAPNVWQPPGDLVMGGHSSGTSLLDLLDAAYSTVAPFARAQYDPNDATAGLDMHGLPAGMVRPGGLAATAGLRLELHLEEWQMGTENINSTVIDAGLVEMPASQTVQAGAAESIDIVRHVYKNLATDAPADGFARSVSASKAVAGRASKTERTLEYSTDLMHGIGGAAPAVALLADLATLVGQMNGRMTPPTVRLSERRLRPAAPTFDAQLGAYWAALFVPATAPRAYYFPGNRYARLGTMPAGYQIIGGEIVFGPNGWHVDADLAPARFTSVPIKVGELVVAWSGPVLPYNRFDPTIRLADFQYITKH
>NZ_CP014145.1|WP_129586635.1|1012151_1013891_-|hypothetical-protein
MAKSDYLGMASTLGAQLKNMGIPMESVAKQTDDLVGLGADLAATFGGTTADAVGALGSLLRGESNPIERYGVSINAAAIKARMAADGLGDLSGEAETAAKTQTILKILAEQTADSVGQFGREADTAAGRTQIADAKWGDAAATLGEVLLPIIVLAGTALGDMAGWMSENSTTATILIGIVAGLAAGVLVLNGAARTYLAAQALLNSAFAVGTVAKVKDLAATVALKAMYAVDMVKALGWFLVQKGLELTAWGASLIAKGKDLAISLLLNAMYGVDMVKALGLFLLQKGLELAAWTAGTAAKVKDTAANVLSKTAIVAGTVAMGVATAAQWAWNVAMTANPIGLIIAAIVALIAVIVLIVVNFKTISRVAGEVWQNVINWVKAAIQWLGLGPTVKAIGDWFQWLGASAAGVWNWIIGGIKNVASWLTNGIVNTLSAVGSWFNWLGATAAGVWSWVTSGIDGIIGALSTAIDWVRSFASSIADGVGGWISNIFGWGGADLTMSVMHAALGVDASGGPDGTGGWPTWAASSSSSTTSSATTIDVKVSGTDQPTKTASKIVEALDEYFRRNGQLPAGGVSWQP
>NZ_CP014145.1|WP_067226932.1|1014290_1014647_-|hypothetical-protein
MSQKISSPIVTVLVEAPGTDELTSYTVQTDNRDMVQWDVIRARKSWPAMSDAPILSFTVIAWNALRRSGAIATQGLDDFMAKCVDVYASDADGVRQTREEVEGSAPVDPTLPVPDPGY

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP014145_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_5

1868058-1868834

Orphan

Consensus_repeat	Method
NNNNNTCNCGNGNNGGGCGGCGGTCG	CRT

12 spacers

The CRISPR arrays of NZ_CP014145_5

>merge|NZ_CP014145|5|1868058-1868834|CRT
TTGCGCGCGGGGGCGCCATCGCGGGTCCAGAGCTTCTGCTCGCCACCGGCGCGCGGGGGCCGGCGGTCTCCATCGCGCGGCGGGCGGCGGTCGGAGCTGTCGCGGTTCTCCCAGGGCCGGCGGTCTCCATCGCGCGGCGGGCGGCGGTCGGAGCTGTCGCGGTTCTCCCAGGGCTTGCGCTCACCGTCACGCGGCGGGCGGCGGTCGGAGCTGTCGCGGTTCTCCCACGGCTTCCGCTCACCGTCACGCGGCGGGCGGCGGTCGCCACCGGTCGACGAGCCGGAGCTGCGGTTCTCCCACGGCTTCCGCTCACCATCGCGGGCGGGACGGCTGCTGCTGCTGTCGCGGTTCTCCCACGGCTTGCGCTCACCGTCACGCGGCGGGCGGCGGTCGCCACCGGTCGACGAGCCGGAGCTGCGGTTCTCCCACGGCTTCCGCTCACCATCGCGGGCGGGACGGCTGCTGCTGCTGTCGCGGTTCTCCCACGGCTTGCGCTCACCATCACGCGGCGGGCGGCGGTCGGAGCTGTCGCGGTTCTCCCACGGCTTGCGCTCACCGTCACGCGGCGGGCGGCGGTCGCCACCGGTCGACGAGCCGGAGCTGCGGTTCTCCCACGGCTTCCGCTCACCATCGCGGGCGGGACGGCTGCTGCTGTCGCGGTTCTCCCACGGCTTGCGCTCACCGTCACGCGGCGGGCGGCGGTCGCCACCGGTCGACGAGCCGGAGCTGCGGTTCTCCCACGGCTTCCGTTCACCGTCGCGGGCCGGGCGCCGGTCA

>NZ_CP014145|5|1|1868058-1868834|CRT
TTGCGCGCGGGGGCGCCATCG	CGGGTCCAGAGCTTCTGCTCGCCACCGGCGCGCGGGGGCCGGCGGTCTCCA
TCGCGCGGCGGGCGGCGGTCG	GAGCTGTCGCGGTTCTCCCAGGGCCGGCGGTCTCCA
TCGCGCGGCGGGCGGCGGTCG	GAGCTGTCGCGGTTCTCCCAGGGCTTGCGCTCACCG
TCACGCGGCGGGCGGCGGTCG	GAGCTGTCGCGGTTCTCCCACGGCTTCCGCTCACCG
TCACGCGGCGGGCGGCGGTCG	CCACCGGTCGACGAGCCGGAGCTGCGGTTCTCCCACGGCTTCCGCTCACCA
TCGCGGGCGGGACGGCTGCTG	CTGCTGTCGCGGTTCTCCCACGGCTTGCGCTCACCG
TCACGCGGCGGGCGGCGGTCG	CCACCGGTCGACGAGCCGGAGCTGCGGTTCTCCCACGGCTTCCGCTCACCA
TCGCGGGCGGGACGGCTGCTG	CTGCTGTCGCGGTTCTCCCACGGCTTGCGCTCACCA
TCACGCGGCGGGCGGCGGTCG	GAGCTGTCGCGGTTCTCCCACGGCTTGCGCTCACCG
TCACGCGGCGGGCGGCGGTCG	CCACCGGTCGACGAGCCGGAGCTGCGGTTCTCCCACGGCTTCCGCT
CACCATCGCGGGCGGGACGGC	TGCTGCTGTCGCGGTTCTCCCACGGCTTGCGCTCACCG
TCACGCGGCGGGCGGCGGTCG	CCACCGGTCGACGAGCCGGAGCTGCGGTTCTCCCACGGCTTCCGTTCACCG
TCGCGGGCCGGGCGCCGGTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_067227945.1\|1879993_1880614_-\|DNA-3-methyladenine-glycosylase	unknown	unknown	gnl\|CDD\|234840
NZ_CP014145.1\|WP_129586799.1\|1858530_1859610_-\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|214510
NZ_CP014145.1\|WP_082717161.1\|1856730_1858422_-\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
NZ_CP014145.1\|WP_067227931.1\|1863744_1864665_-\|NAD-kinase	unknown	unknown	gnl\|CDD\|235121
NZ_CP014145.1\|WP_082716868.1\|1879246_1879975_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067227933.1\|1864669_1865482_-\|TlyA-family-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|224110
NZ_CP014145.1\|WP_082717162.1\|1884276_1885281_-\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|239783
NZ_CP014145.1\|WP_067227928.1\|1862048_1863752_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|223571
NZ_CP014145.1\|WP_067232404.1\|1854034_1854913_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP014145.1\|WP_067232407.1\|1855054_1855954_-\|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl\|CDD\|234713
NZ_CP014145.1\|WP_067227936.1\|1865646_1866729_-\|HAD-IIA-family-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_CP014145.1\|WP_067232416.1\|1875110_1877078_-\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_CP014145.1\|WP_067227948.1\|1880629_1882120_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP014145.1\|WP_067227953.1\|1883077_1884280_-\|acetylornithine-transaminase	unknown	unknown	gnl\|CDD\|235112
NZ_CP014145.1\|WP_082716867.1\|1877234_1878593_-\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_CP014145.1\|WP_067227955.1\|1885286_1886438_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl\|CDD\|235441
NZ_CP014145.1\|WP_067227921.1\|1856028_1856682_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239516
NZ_CP014145.1\|WP_067227951.1\|1882151_1883081_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|234835
NZ_CP014145.1\|WP_067227939.1\|1878665_1879283_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|339675
NZ_CP014145.1\|WP_067227926.1\|1859930_1861892_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378045

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_067227945.1\|1879993_1880614_-\|DNA-3-methyladenine-glycosylase	gnl\|CDD\|234840	PRK00802, PRK00802, DNA-3-methyladenine glycosylase.	1.74635e-80
NZ_CP014145.1\|WP_129586799.1\|1858530_1859610_-\|PKD-domain-containing-protein	gnl\|CDD\|214510	smart00089, PKD, Repeats in polycystic kidney disease 1 (PKD1) and other proteins. Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.	4.00126e-09
NZ_CP014145.1\|WP_082717161.1\|1856730_1858422_-\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP014145.1\|WP_067227931.1\|1863744_1864665_-\|NAD-kinase	gnl\|CDD\|235121	PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	1.49718e-166
NZ_CP014145.1\|WP_067227933.1\|1864669_1865482_-\|TlyA-family-RNA-methyltransferase	gnl\|CDD\|224110	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].	1.80905e-95
NZ_CP014145.1\|WP_082717162.1\|1884276_1885281_-\|acetylglutamate-kinase	gnl\|CDD\|239783	cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK).	1.66063e-148
NZ_CP014145.1\|WP_067227928.1\|1862048_1863752_-\|DNA-repair-protein-RecN	gnl\|CDD\|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	2.13328e-161
NZ_CP014145.1\|WP_067232404.1\|1854034_1854913_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	3.01034e-84
NZ_CP014145.1\|WP_067232407.1\|1855054_1855954_-\|site-specific-tyrosine-recombinase-XerD	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	7.19032e-143
NZ_CP014145.1\|WP_067227936.1\|1865646_1866729_-\|HAD-IIA-family-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.06945e-72
NZ_CP014145.1\|WP_067232416.1\|1875110_1877078_-\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	2.84774e-101
NZ_CP014145.1\|WP_067227948.1\|1880629_1882120_-\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP014145.1\|WP_067227953.1\|1883077_1884280_-\|acetylornithine-transaminase	gnl\|CDD\|235112	PRK03244, argD, acetylornithine transaminase.	0
NZ_CP014145.1\|WP_082716867.1\|1877234_1878593_-\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_CP014145.1\|WP_067227955.1\|1885286_1886438_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl\|CDD\|235441	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ.	3.16569e-180
NZ_CP014145.1\|WP_067227921.1\|1856028_1856682_-\|NUDIX-hydrolase	gnl\|CDD\|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	1.69126e-46
NZ_CP014145.1\|WP_067227951.1\|1882151_1883081_-\|ornithine-carbamoyltransferase	gnl\|CDD\|234835	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional.	0
NZ_CP014145.1\|WP_067227939.1\|1878665_1879283_+\|DNA-binding-protein	gnl\|CDD\|339675	pfam16264, SatD, SatD family (SatD). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Streptococcus species. The function of this family is involved in acid resistance.	0.00618242
NZ_CP014145.1\|WP_067227926.1\|1859930_1861892_-\|hypothetical-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	7.52046e-22

>NZ_CP014145.1|WP_067227936.1|1865646_1866729_-|HAD-IIA-family-hydrolase
MALFRRRSSQVAAATPLDGVDVLLADLDGVVYAGPKAIPHAVESLNRAAEALRVGYITNNASRSDASVAEHLSELGLSVQADDVVTSPQAAMRLLTGLIEPGALVLVVGGDGLVVEVEKAGFRVTRSADDLPAAVVQGFAPDVGWAQLAEAAFALAPTGPGADIPWVATNTDWTIPVARGIAPGNGTLVSAVHTAVGRLPLVAGKPEVPIFEVARERFSASNALFIGDRLDTDILGANRAGMTSLLVLTGIDKAKQALAAGADMRPRFILSDLRQLHEPYPETMLSADGTQATVNAASVRLRGNDVQIVKAGDGGIDLLRAACAVIWGSGRAIYGLNVPEELYADGAGVALSAAGSNVAV
>NZ_CP014145.1|WP_067227933.1|1864669_1865482_-|TlyA-family-RNA-methyltransferase
MTDHTEGVRLDAALAERGLARSRTHAATLVADGLVTVNGKPVIKAATKVFPSQKIEVAGADHYVSRAAHKLIAALDTFPVHVSGATVLDAGASTGGFSQVLLERGAARVLAVDVGHGQLAPQLAHEDRLSLVEGFNVRYMTAASLAAASGWPEQPSVVVGDLSFISLTTVLPALVETAVDGANFVLLVKPQFEVGRTGIREGVVKNPGLRADAVNAVLWAAHDLGLRTAGLVASPIAGGSGNHEYLVWLSATTGSDPSEWIDRVTATTGA
>NZ_CP014145.1|WP_067227931.1|1863744_1864665_-|NAD-kinase
MTPVQRPILVVAHTGRRDALEAAVAACAQLRAAGATPVIPADQRDDLKDFFPDHGGSLLTLGVEVQAAELELVVVLGGDGTILRAAELVRSASTPLLGVNLGHVGFLAESERDSLSEAISRGLDRDYHVEERMTLAVRVKQGEDVVYETWALNEATVEKASGERMLEVVIEVDGRPLSSFGCDGVVMSTPTGSTAYAFSGGGPIVWPTLDAMLLVPLSAHALFARPLVVGPDSSLAVEVLARTSASGVLWCDGRRTRDLPPGARVVVRRSPVPVRLARLHEAPFTDRLVNKFQLPVTGWRGPVGRD
>NZ_CP014145.1|WP_067227928.1|1862048_1863752_-|DNA-repair-protein-RecN
MIEELTIRDLGVIAEAVLPLGPGFTAVTGETGAGKTMVVSALGLLLGERADAGAVRQGQAQSWVEGRWVVAEDGPVAERVRLAGGDLDGPELLLGRTVSAEGRSRAIVGGRQAPAAVLAELADHLVIVHGQSEQMRLRSATAQREALDRFAGSDFAAVLDSYGRAYRRWHTNDEELARLRSERDRRSREAEELREALAEIEAVAPLPGEDTELTERAERLNNLEELRQAATIAREQISAENDGGGIIDTPDALTLMNAARRAVERAAAHDATLSPIAESLASIEFLLADVVGELSTYLDGLDTDGSRELETVQERRAELAALVRKYGSSLDEVIEAMELGSSRLFELDGDAERIAELEAAVASDHDVVDRLAAELSALRTAAAERFARQVTAELGPLAMPNAELSIEVSPRDELGASGGDTVSILLKPHAGADPRPLGRGASGGELSRVMLAIEVVVAGTDPVPTFVFDEVDAGIGGAAAIEIGRRLARLAESAQVIVVTHLAQVAAFAQNHLTVVKDRDGAVTASSVRQLQGDERVAEMARLLSGLPDSASGLEHARELISLAQDS
>NZ_CP014145.1|WP_067227926.1|1859930_1861892_-|hypothetical-protein
MAIQRTRSVALALTLTMTCGALVVVQAAPAYADPGGIVISELNYHAVSDVDGDDFLELSNTSAASIDVSGWSFSAGVTGTLPAGTVIPANGYLVVGKDAARFQLTYGFAPDAVYGGNLSNSGETVTLVDGALAVIDTVTYADVAPWPTSPDATGPTLELRDLLSDNTLPESWGASVATGGTPKAVNSINGTGVPPAITETLATPARPTPSQAVVVSARLQPGSTATLSYKIMFAADVAIPFLDDAASPGGAGDGVYAATIPAQSGGKLIRYRIDAMAGSKAYSMPAAGESMRYRGVVVRDSAVTSQLPVIEWFMDDAVYADILANHRLDDVAGAAVWAYNGEVIDGVQMSVRGNSSRTDAKVNWKVVMPAGYKFDLGGQLPYALDKFALQNYSANFADVGWSTVKAAGARGLSIIPVRTQRNAAFWSLGRIMETEDGSWRTAQGVKNWAIYKADGGAVGKTASPAALKAALWLDKKTREDEDFTDVWTLSNTVDAPASAAQQAWIYENVNVPELINYMAINSIMRHQDSGWYNWWLARDTEGTGRWEMWHWDLNWIFTVPASDGKGLFLTPDTSNRFTQAMLKYPEFKEMFYRRLSTLSDQFLAAGQFEAQWDAISTKTTPEWNLDRAKWGGYTPHRHGRLSLRASPTGGRPS
>NZ_CP014145.1|WP_129586799.1|1858530_1859610_-|PKD-domain-containing-protein
MLKAGTRIVDSVSYTNAAPWPAAADGTGPSLELLSPTADNADPANWRAASGVQGTPGLPNTPDAAANIAPSAGLTASATGLTVAVNGSTSRDPDGTIASYAWKFSDNGTASGISASHTFAAAGTYTVTLTVTDNKGATGTASQTITVTATPGGAFAVDTFARTVTGGLGTAETGGAWAPQANASSFAVNGGEAKITAKSGTSMRVFLNAVSSTDTDLKTKISFTRQTASSMYAGVVARQVGAASYGARVVVSASGAVQLQTQLNTDTILKSANLSGVSYATGDKLNLRVQVFSTAPTTIRAKAWKVGAAEPASWLVSSTDATAALQAPGSIGLYSYLSSTASPSPIVVSYDDFWAGPTN
>NZ_CP014145.1|WP_082717161.1|1856730_1858422_-|CTP-synthase
MNNKNADNSDGITKHIFVTGGVVSSLGKGLTAASLGNLLTARGLRVVMQKLDPYLNVDPGTMNPFQHGEVFVTDDGAETDLDIGHYERFLDINLSQAANVTTGQIYSTVIAKERRGEYLGDTVQVIPHITDEIKRRMRLQASEEPQPDVIITEVGGTVGDIESQPFLEAARQVRHELGRKNVFFVHVSLVPYMGASGEQKTKPTQHSVATLRSIGIQPDALVLRSDRPVTESNKRKIALMCDVEEEAVINTPDLRSVYDIPTVLHAQGLDAYIIEQLGLAKAGDVNWDGWQKVLDAVHEPKHEVTIGLVGKYIDLPDAYLSVTEALRAGGFAQQTKVNIKWIPSDECETEEGAARNLAPLDAICVPGGFGVRGIEGKLGALTFARENGIPTLGLCLGLQCMVIEYARTKAGLTGASSTEFDPETEFPVIATMEEQVEIISGGDLGGTMRLGLYEAALAEGSLVAELYGSTLITERHRHRYEVNNGYREQIAAAGLSFSGTSPDRHLVEFVELPRDQHPFYVATQAHPELRSRPNNAHPLFRGLVSAALDRQQASRLFEVKDAE
>NZ_CP014145.1|WP_067227921.1|1856028_1856682_-|NUDIX-hydrolase
MPHAEEPREPLADTRQAAPVLSSSTVFDGRVWGVRRDRFEYNGAEIEREYVDHSGAVAVLAIDDAERVLLIKQYRHPVRMREWEIPAGLLDIRGESPLRAAQRELAEETDLQAAEWSVLSEFYTSPGGSDEAIRIYLARGLTATASPFPRSDEEADIELRWVGLDELVDAVMARRLQNPSLVIGALAATVARSRGWQGLDAGDTSWPRHPKSEALGE
>NZ_CP014145.1|WP_067232407.1|1855054_1855954_-|site-specific-tyrosine-recombinase-XerD
MQRAVQNYLRHVTVERGLSTNTIAAYRRDLALYTQWLAGEGVDDPSGVTGNHVGAFVQHLGTREEEPLQASSIARVLSSVRGWHRFLLEEGHTETDVAHETKPPKLGSRLPKAITIEQVEALLDATRGDEIQQLRDRALLELLYATGARVSEAVDLNVDDVIDQDVVRLLGKGGKQRIVPVGSFARAALDAYLVRARPVLSRRGTATPALFLGLRGQRVSRQNAWLIIRAAAARAGLDIEVSPHTLRHSFATHLLAGGADVRVVQELLGHSSVATTQIYTLVTADTLRDMYTSAHPRAR
>NZ_CP014145.1|WP_067232404.1|1854034_1854913_-|ParA-family-protein
MGDLAYGRGVRQEPGMGPTNRPQTDFPVPAPLKSHGPARIIALCNQKGGVGKTTTTINLGATLAEYGRRVLAIDFDPQGALSAGLGVQTHDVPTIYDLLLSRSAKPADAIQKTRVPGLDVIPANIDLSAAEVHLVNEVAREQILASVLRKVSDDYDVILIDCQPSLGLLTVNALTASHGVLIPLECEFFALRGVALLIETIDKVRDRLNPAIELDGILATMYDSRTLHSREVLDRVVEAFGDKVLETVIGRTVKFPDASVAGAPITQFAPEHAAARAYRQLARELVSRGAVA
>NZ_CP014145.1|WP_067232416.1|1875110_1877078_-|AarF/ABC1/UbiB-kinase-family-protein
MAVNFWQLVAVGIATLLLMLVLGGVARRILGVRIGATRLVLAGILGLGAELGFESRFVWGQLEYSLALLPLQIGIVLFVAVAFLVLAEIVVPTGSVPRPDQWLPLLKARAERTRRYAEISQIAVREGLVPFRPNTAPTAAGRAERAHQARALRGALESAGGAFVKLGQLLSTRSDLLPPEYLAELAQLQQRVPPAKWVEVKALLEEELKAPLDTHFDSFDEIPLAAASIGQVHRAVLKTGEAVAVKVQRPGIIPLVDRDLDILIRLATQFERTTAWGKDLGVQALAESFARSLREELDFRVEVSNMAAMELTQAKHRESERVGIPRHFGELCTSRVIVMELIEGHTLSDPRTFREHSAAEREQQANRLLRSTLSQIIDDGVFHADLHPGNIVLQPTGEIVLLDFGSVGRLDSQMRGQIGEVLLAFYRGDAAAFTDALLGFVELPDDIDETALRRQIGVFVATRLGPGASLDVKVFTEMVRMLTDNRIAVPAELASAFRAVAGLEGTLRHVSPGFDMLTEASGFAAERIKRGFSPYAVYTNIREEALSLAPLLRRLPTRIDRITGALADGRLSVNIRLFADRRDRTLLRNLVNLLVVSFLAGAFGIMAAMLLISDGGPRVSETLTLFQVFGYLLVLLSGLLTLRVLFDVFRLQQRV
>NZ_CP014145.1|WP_082716867.1|1877234_1878593_-|tyrosine--tRNA-ligase
MSSRVRRCLGRRPADTLEGVSDPVILKAQHNDPSFSDIWEEINWRGLVHVSTDAGELKELLAGEPITYYCGFDPTAPSLHLGNLVQLLLMRRLQLAGHRPLGLVGGSTGLIGDPRPTAERTLNTKDTVVEWVGYLQAQVSRFLSLEGENAMTLVNNLDWTAPLSAIDFLREIGKHYRVGTMLKKDAVAARLNSDAGISYTEFSYQILQGLDYLELYRQYECVLQTGGSDQWGNLTSGTDLIRRTEGASVQAIGTPLITNSDGTKFGKSEGNAIWLDSKLTSPYAFYQFWLNTDDADVIARLKIFTFLERAEIERLEAAVAAEPFRREAQRTLAFEVTSLVHGVDATEKAIAAAGALFGQGELTELDAETLEAALRELPNTTTAPDAGIAQLLVDTALCDSLSDARRAIKQGGVSVNNVKISDEAETISGHVLASGVAVLRRGKKTLAGIFVE
>NZ_CP014145.1|WP_067227939.1|1878665_1879283_+|DNA-binding-protein
MFVITADQIASRTRADVTAPTIERLQRAHGAQLLLPPDRTAGDEIQLLGSDAATTLDVVLELTRTGDWSVGVGVGTVGLPLPAATREASGPAFYAARDAITRAKKRSTRFALHQQAAAEPGSTPAGDAEALIDLALALRQRRTAPGWELYDLVRSGLSYKEAAERLEISAPAASARAKAAQLTIEQNAVPALVGLLAALDRRSHS
>NZ_CP014145.1|WP_082716868.1|1879246_1879975_+|hypothetical-protein
MAGSTRPEEPLVITPHSLAWLLPLLFWAFLIGLLATGVLFAVLAMVRKLPYAIWAAGGALVLALLLTLSATTSLWSSFWAPAGGPTGALIALLGSALAVFGGGPIAQLALTLATRGSVAPGAHGGILVAAPAAAQAAAPASTPVSASESIPGSPAPAAETPAVETREVLRGGAAIGVLERLCVVLGIVAGFPEALAIVIAVKGLGRFTELAAAEARERFIIGTLASLLWASACAVLVRLALS
>NZ_CP014145.1|WP_067227945.1|1879993_1880614_-|DNA-3-methyladenine-glycosylase
MQAPAGVPREFFARDATELAPLLLGAVIRHTTNQGTVAVRLSELEAYRGNGEDPGSHAHRGVTPRTRVMFGPPAHLYAYFSYGMHVCANIVCAPDGQAAGLLLRGGEVVQGVELARVRRPTASTDRDLARGPARLAAALGIRLAQSGADLLAPPFTLELPAQPAAVATTARTGVGGEGGGVAFPWRFYIPGDPTVSPYKRHPKLAP
>NZ_CP014145.1|WP_067227948.1|1880629_1882120_-|argininosuccinate-lyase
MSNDTSSDLSKNTPNGTVHGVGETTEGALWGARFAGGPSPELARLSKSTHFDWQLAEYDIAGSKAHAQALAAAGYLDDAELAGMHAALDELLAKVQGGQFLPTESDEDVHGALERGLIEIAGSELGGKLRAGRSRNDQIATFIRMLLRDHSVTISRQLIDLIDALAAQAAAHPAAIMPGRTHLQHAQPVLLSHHLLAHCWPLVRDLDRLADWNRRADFSPYGSGALAGNTLGLDAGLVASVLGFGGVVENSIDGTASRDLVAEFSYVLAQVGIDLSRLSEEIILWNTREFDFVTLDDAYSTGSSIMPQKKNPDIAELARGKSGRLIGNHTGLLATLKGLPLAYNRDLQEDKEPVFDSLQNLEVLLPAFTGMVATMRFHTERMAELAPQGFSLATDVAEWLVKQHVPFRDAHEITGAMVKFCEDRGLELHEIDDASLAAIDARLTPEVRSVLSIEGSVNSRDGLGGTAPVRVAEQLAALTARVREFAQALPSGNTTV
>NZ_CP014145.1|WP_067227951.1|1882151_1883081_-|ornithine-carbamoyltransferase
MTRHFLRDDDVTPAEQAEILQLALELKRDRFAQKPLAGPQTVAVIFDKSSTRTRVSFAVGIADLGGSPLIISTASSQLGGKETPSDTARVLERMVSAIVWRTYGQAGLTEMAAGTTVPVINALSDDFHPCQLLADLLTIQEKRGTLAGLTLTFLGDGACNMAQSYLLAGATAGMHVRIASPEGYTPSEQVVADAAAIAEQTGGSVALFTDPVQAVSGSDVVVTDTWVSMGKEEEKAARVAELGAYRVDSALMAQAAPDALFMHCLPADRGYEVTAEVIDGPQSIIWDEAENRLHAQKALMVWLLAQNAA
>NZ_CP014145.1|WP_067227953.1|1883077_1884280_-|acetylornithine-transaminase
MTDWQQQSANRMMRTFGAPMAMLVRGQGARVWDAAGNEYLDFLAGIAVNALGHAHPVFVEALSRQAATIAHVSNYFASPPQLELAERLVRLSGAGEDGRVFFSNSGAEANEAAFKLARLHGGTDRPRILALTDAFHGRTLGSLALTGKPAMRAPFEPMPGGVEHIDSTIEALEAAIGDDVAALFLEPIKGEAGVLPLPEGYLQAAREITSRHGVLLVIDEIQTGAGRTGEWFAFQHAGITPDAITVAKGIGGGVPIGALITFGAASDLFGPGHHGSTFGGNPLMTATANAVLGEIEHANLVRNAAERGAELRAAIEAIGSPHIVGIRGQGLLLGVALSEPRAGGLTAAAMGEGLIVNAANPNTIRLAPPLNIDSADITEFIARFSRALATLDTPTESDAS
>NZ_CP014145.1|WP_082717162.1|1884276_1885281_-|acetylglutamate-kinase
MSETTRTDDDATTTEELELIQLDAAIKAATLIEALPWLKRFHDQIIVVKFGGNAMVSEALQRAFAEDMVYLRYAGIRPVVVHGGGPQISAMLEKLGIQSEFRGGYRVTTPETMEVVRMVLTGQVNRELVSHINEHGPLAAGLSGEDAGLFQGRRRGAIVDGEEVDLGLVGDVIAVDPAAVHAQIEAGRIPVISSIAPDTEVPGQSLNVNADSAAAALAVALGAAKLVILTDVAGLYRDWPDRDSLVSVIDVPELRSLLPSLESGMIPKMAACLEAVEGGVPKAAIIDGRVPHSILLEIFTHRGIGTEVVLPEENQPETTDSADATGAPTQGATA
>NZ_CP014145.1|WP_067227955.1|1885286_1886438_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MSVTTPLGFDAAGIAAGIKSSGAPDLALVVNRGPSQAAAVVFTSNRAQANPIIWSKEVIKDGTVSAIVLNSGGANCFTGSAGFQVTHRTAEAVAAALDVSAGDVLVCSTGLIGDQLDGDVLAAGVATAAAALSADGGEHAARAIMTTDTVPKTASVSKGGWSIGGIAKGAGMLAPGLATMLVVITTDALLDSAALDTALRASTRVTFDRLDSDGCMSTNDQVSLLASGASGVTPELAEFTAALTAVCAELALKLQADAEGASHNIAIEVVGAASEDEAVEVGRSVARNNLFKAAVFGNDPNWGRVLAAIGTTQAEFDPYNVDVSMNGVRVCHAGEPDQPRELVDLSPRDTHVLIELHVGAASATIFTNDLTHDYVHENSAYAS

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Crispr_ID: NZ_CP014145_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_6

2133829-2133938

Orphan

Consensus_repeat	Method
TTGTGGCGACAGATCCCGCTGGCTCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014145_6

>merge|NZ_CP014145|6|2133829-2133938|CRISPRCasFinder
TTGTGGCGACAGATCCCGCTGGCTCGAAGGAGAGCCAGCGGTTGTGGCGACAGATCCCGCTGGCTCGAAGGAGAGCCAGCGGGTTGTGGCGACAGATCCGGCTGGCTCGA

>NZ_CP014145|6|5|2133829-2133938|CRISPRCasFinder
TTGTGGCGACAGATCCCGCTGGCTCGA	AGGAGAGCCAGCGGTTGTGGCGACAGATCCCGCTGGCTCGAAGGAGAGCCAGCGGG
TTGTGGCGACAGATCCGGCTGGCTCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_067228394.1\|2138229_2138889_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP014145.1\|WP_082717170.1\|2125598_2126996_+\|nucleotide-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|223749
NZ_CP014145.1\|WP_067228405.1\|2143143_2144079_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl\|CDD\|235110
NZ_CP014145.1\|WP_067228376.1\|2132579_2132933_+\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|225060
NZ_CP014145.1\|WP_067228400.1\|2140057_2140972_-\|methionine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_CP014145.1\|WP_067228386.1\|2134738_2135716_-\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|179535
NZ_CP014145.1\|WP_067228397.1\|2138888_2139914_-\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_CP014145.1\|WP_067228391.1\|2137546_2138038_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP014145.1\|WP_067228363.1\|2121394_2122843_+\|NADP-dependent-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236453
NZ_CP014145.1\|WP_067228368.1\|2123889_2125257_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133045
NZ_CP014145.1\|WP_067228366.1\|2123007_2123859_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067228378.1\|2132940_2133282_+\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|376882
NZ_CP014145.1\|WP_082716902.1\|2130150_2131209_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187541
NZ_CP014145.1\|WP_160329737.1\|2127317_2130023_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200589
NZ_CP014145.1\|WP_067228381.1\|2133328_2133685_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_082716903.1\|2131099_2132452_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP014145.1\|WP_067228383.1\|2134013_2134487_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067228402.1\|2141186_2143049_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP014145.1\|WP_067228407.1\|2144088_2144634_-\|DUF4287-domain-containing-protein	unknown	unknown	gnl\|CDD\|379478
NZ_CP014145.1\|WP_067228388.1\|2135758_2137186_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184641

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_067228394.1\|2138229_2138889_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	2.53089e-75
NZ_CP014145.1\|WP_082717170.1\|2125598_2126996_+\|nucleotide-sugar-dehydrogenase	gnl\|CDD\|223749	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane].	1.48445e-126
NZ_CP014145.1\|WP_067228400.1\|2140057_2140972_-\|methionine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	6.52283e-79
NZ_CP014145.1\|WP_067228376.1\|2132579_2132933_+\|DUF202-domain-containing-protein	gnl\|CDD\|225060	COG2149, COG2149, Predicted membrane protein [Function unknown].	2.56434e-23
NZ_CP014145.1\|WP_067228363.1\|2121394_2122843_+\|NADP-dependent-phosphogluconate-dehydrogenase	gnl\|CDD\|236453	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP014145.1\|WP_067228386.1\|2134738_2135716_-\|ribose-phosphate-diphosphokinase	gnl\|CDD\|179535	PRK03092, PRK03092, ribose-phosphate diphosphokinase.	0
NZ_CP014145.1\|WP_067228397.1\|2138888_2139914_-\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	1.30093e-150
NZ_CP014145.1\|WP_067228391.1\|2137546_2138038_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.39295e-12
NZ_CP014145.1\|WP_067228388.1\|2135758_2137186_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184641	PRK14352, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_CP014145.1\|WP_067228368.1\|2123889_2125257_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133045	cd06423, CESA_like, CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.	2.88084e-34
NZ_CP014145.1\|WP_067228407.1\|2144088_2144634_-\|DUF4287-domain-containing-protein	gnl\|CDD\|379478	pfam14117, DUF4287, Domain of unknown function (DUF4287). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 70 and 180 amino acids in length.	0.000766328
NZ_CP014145.1\|WP_067228378.1\|2132940_2133282_+\|DUF202-domain-containing-protein	gnl\|CDD\|376882	pfam02656, DUF202, Domain of unknown function (DUF202). This family consists of hypothetical proteins some of which are putative membrane proteins. No functional information or experimental verification of function is known. This domain is around 100 amino acids long.	1.67932e-06
NZ_CP014145.1\|WP_160329737.1\|2127317_2130023_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200589	cd10967, CE4_GLA_like_6s, Putative catalytic NodB homology domain of gellan lyase and similar proteins. This family is represented by the extracellular polysaccharide-degrading enzyme, gellan lyase (gellanase, EC 4.2.2.-), from Bacillus sp. The enzyme acts on gellan exolytically and releases a tetrasaccharide of glucuronyl-glucosyl-rhamnosyl-glucose with unsaturated glucuronic acid at the nonreducing terminus. The family also includes many uncharacterized prokaryotic polysaccharide deacetylases, which show high sequence similarity to Bacillus sp. gellan lyase. Although their biological functions remain unknown, all members of the family contain a conserved domain with a 6-stranded beta/alpha barrel, which is similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, belonging to the larger carbohydrate esterase 4 (CE4) superfamily.	4.23494e-53
NZ_CP014145.1\|WP_082716903.1\|2131099_2132452_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.49418e-45
NZ_CP014145.1\|WP_082716902.1\|2130150_2131209_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187541	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs. UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.49767e-79
NZ_CP014145.1\|WP_067228402.1\|2141186_2143049_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	5.41978e-161
NZ_CP014145.1\|WP_067228405.1\|2143143_2144079_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl\|CDD\|235110	PRK03188, PRK03188, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	1.64861e-133

>NZ_CP014145.1|WP_067228381.1|2133328_2133685_+|hypothetical-protein
MTNHPELAIHDDDDSRPLHGSRRRRLTQIVVLLCVLGLVLPTILTTLSVSTATAERACEITVAAYYPDAGGFRAGFELFGQGGPGWQCYRLNQSGAESYLAPLGLLPGLPSVVHGQRS
>NZ_CP014145.1|WP_067228378.1|2132940_2133282_+|DUF202-domain-containing-protein
MTTAHPPAPLPRDPGLQPERTALAWNRTALAVAINAALVLRAGALGGAPLFVAVGVLLLLAAGAATAYSAIRKRQLLRAVGTPPQSSSLALLLAAAVTLVASAAGIASILTIR
>NZ_CP014145.1|WP_067228376.1|2132579_2132933_+|DUF202-domain-containing-protein
MRNPQWRQQGEEPDYRFTLANERTFLAWIRTALALLAGGVLLHQFSHALGPRWVVVALAVLLAIIGAVLSVIAYTRWRANEIAMRTGKPLPHSVLLPLLAGFCLLTAAVIAVLMILG
>NZ_CP014145.1|WP_082716903.1|2131099_2132452_-|APC-family-permease
MAIGLASMIGAGVFFVWAPAAAVAGAGLLIGLVIAAVVATLNALSSAQLAMAHPVSGGAYAYGRALLGPWWGFSAGWLFLAGKTASAAAIALIAGGYLWPGQARAVAVAAILVLAIINALGVRSTARFSGVVVAVVLLGLCALLVLVAVWAAQGGTGAAPVEPVAGADAGWLGIGQSAGLLFFCFAGYARMATLGEEAREPRRTLPRAILWALAIALLLYGAIGAATVLVLGPERLARSSSPLAELASVVAGGGAGGWVLVVSLVAALACLGSLLGILAGLSRTSLAMARDRELPGALRRVSARRGSPVVAELVVAAVAIAAVLLLDPAWLVGFSATCVLVYYAIAHVAALRQPRAERWLHPAVQLLGCAGCLALAFTLPGQGVLIAALVLGPGLPAGGSASRGARGGQQERLPARRRSAGQVREQGCRSAHSRRRPPPPRRPLDAGRQR
>NZ_CP014145.1|WP_082716902.1|2130150_2131209_+|NAD-dependent-epimerase/dehydratase-family-protein
MITTVTGGAGFIGSHLVEELIARGDYVTVIDDLSTGSIENLSSVLGHIRMRFIEGSICDPDAVAAAVEGADRVFHLAAAVGVRLIVEHPLESLRTNIHGTETVLDAVRATGATLLLASTSEVYGKNTADSLDEEADRILGSPLKSRWTYAAAKGIDEAIAHAYWREYGLRVAIVRLFNTVGPRQTGRYGMVVPTLVGQALAGKPVTVFGNGSQTRCFGYVGDVVPALIALAEEPAAYGQAFNLGGRYEVSISSLAQRAIDLLQSDSSIVYVPYAEAYPEGFEDMQRRVPNNGKARELIGFDPQTTVDEIIGHVASALTAAGPRRADGAAGAVADASEQIGNPAHALDQQIAV
>NZ_CP014145.1|WP_160329737.1|2127317_2130023_+|polysaccharide-deacetylase-family-protein
MLAVAPAQAAGETVVTLTFDDANADQMPAAALLKDKNLPATFFINSGYLNQPGWMSTADLATLSSEGHEIGGHTRSHPDLVQVPADEALRQICNDRVVLSNLGYKVTSFAYPFASSNASTEAAVQSCGYNSGRGLGDLRTAPGTPCATCDFAESIPPTDPYWTRAADQVDSSWTLQRLQQTVTDAAANGGGWVQLTFHHICDGCDQLALSPAVFDQFTTWLAGWKNGTSTQVKTVDQVIGGTVKPLVSGPVFVPPPAAGPGVQALQNPSFETVDASGLPTCWWDSFYGINTATFATVSPGRTGNNASQVTVSGYTSGDAKRLQIFDGGACAPTVVTGQTYSLRAWYKSTGATQFTVYYRQTDGSWLYGTSSPWFAAATDYTQAVWDTPAIPAGVNGISFALNVFGNGQLTTDDYAMYNTVGAPPAQELTSAVPTITGTAKVGSVLTANAGTWAPAPVTLAYQWLVGNTAVTGATAATYTPVAADVGKTVTVQVTGTKTGYATKAVTSAATAAVAAATVPQLVAPVPTITGTAKVGSVLTANAGTWTPAPVTLAYQWLVGNVAVPGATAKTYKPVAANVGKTVTVRVTGTKTGYASKAVTSAATAAVVAATAPKPPIRLSGANRYETSARISAATFSPGVPVAYVATGSDFPDALSGGPAAGATGAPMLLVSSTGIPPAIMTELLRLKPARIVVLGSSGVVSSAIESALAKISPTSRIAGADRYETSARISAATFKPGVAVAYVATGADFPDALSGGAAAGSQASPVLLVQPTSVPAAIRAELQRLKPAKIVVLGSTGVVSAAVATALNGIAPTTRVFGADRYATSASISAAVFSPDVKVVYLATGADFPDALSGGPAAIKEGGPVLLVRGTRFPRPSVQSSPGCARSASSCWAAPPWSTMR
>NZ_CP014145.1|WP_082717170.1|2125598_2126996_+|nucleotide-sugar-dehydrogenase
MDKIRLRSDTRAGALLEPIDLEQVGFKQLDFSPTPVLKPRSGPVKSNFRYDIAIIGMGYVGLPTSLAFAETGLRVLGIELSERRIEAITDGHVDLLASDQERLSNARHNGLLTLSGDPALLAQAAAVIVCVPTPVDAYLVPDLSLLRAACATVVEHAVAEQVLILTSTSYVGSTRDLMVNPLVERGFTPGTDIFIAFSPERINPGAAGFAHEDVPRVVGGATPNCTAAAATIVGSYVTQIHPVSSMEAAEMTKLVENIFRAVNIALANEFADVSALLDLDVVEVINAAATKPYGFMPFLPGPGVGGHCIPCDPHYLLWQLHKERRSAPLIEQTMSLIAARPRHVVDRVRELLSAKGRGLTGTRVIVVGVAYKPDVEDVRESPALEVMSSLLHEGAIVAYYDPLCPHVRLHDGSMLASIGDPSEFGSDVAVIHTAHTGVDLGWLDDVDLVLDTSYSASSISHAVRL
>NZ_CP014145.1|WP_067228368.1|2123889_2125257_-|glycosyltransferase-family-2-protein
MFIGIVIVLLVGASTIFWIIVGLLRFAAEKFGTDPLAAAPGAPSREGEGADVIGIEDVAILLAAHNESAVIARTIRQAAGHVPLSQIHVVSDGSSDDTVAIARAEGAQVLDLNPNRGKAGALVAALDHFQIVTRFKVMVLLDADTHLAPDYLDTGLRLFSDPEVVAVAGRVRTLPEPAPPTRLGRVLVSYRERLYVVLQLFLKYGQAAKRANAIFIVPGFASMYRTRVLRHIDIAPPGLVIEDFNMTFEVHAKQLGRIEFHPRAAVAYTQDPGTIRDYLNQTRRWSLGFWQTARKHRFRWRKFWVALGFYILDITTSAMVYLLLLPLLAATIVAALLQASNPNTVLQVDNAIWPQLHVWSSAVVWSDSLLAIVTPWQVLFVLVLPDYALTLFAAIVLKRPKLLAVGVFFPIVRAADAWICLSTLWASRRMHGDGRWVSPERRLDVVRGEVASPGG
>NZ_CP014145.1|WP_067228366.1|2123007_2123859_+|hypothetical-protein
MTSRSEHVVPQQRARARLARRRVNGLLSAAALLALVALTACAPSSAQGDGSHSSTGKPGPSGETPAQGYPLHTNIVSTTFWVGEIFDPNASDGSQMISTYDSQWFQHYGGCDGTSVAGTCETEARTAANDYFPTSMTPLLNPFYLDLPFDDVNDPDAFARRAEVIPWANAPEYQGQAQNNEVSMMLNRWVKLIKGDRVCYGQIADAGPGQYNDADYVFGSQDARPQNRKFNGAGMDVSPALNGCLGFSSLNGEDDRVDWQFVEEADVPPGPWLRRVSQGHEVH
>NZ_CP014145.1|WP_067228363.1|2121394_2122843_+|NADP-dependent-phosphogluconate-dehydrogenase
MSNSQANIGVIGMAVMGSNLARNLASREGNTVAIYNRSAEKTRAVAAEFPDAGFVASETIEDFAASLQKPRTAIIMVQAGRATDAVINQLVEVFEPGDIIVDGGNALFTDTIRREKAVRETGINFVGAGISGGEEGALLGPSIMPGGSASAWETLGPILRSIAAVVDGRPCVTHVGTDGAGHFVKMIHNGIEYADMQLIAEAYDLIRRGTGKSPAEIADIFAEWNTGELESYLIEITAEVLRQTDAATGAPLVDVILDQAGAKGTGAWTVQTALDLGIPVSGIAEAVFARSLSSKPAQRAAASALPGPDGDFTVADVDAFVEDVRLALYASKIIAYSQGFDAIVAGAEEYNWDIKKGDIAAIWRGGCIIRAQFLNRITDAYAENPGLVALVTAPYFTDAVAGAQSAWRRVVIAAAQAGIPSPAFSSSLAYYDGLRADRLPAALVQGQRDFFGAHTYKRVDRDGTFHTLWSGDRSEIQAVDTH
>NZ_CP014145.1|WP_067228383.1|2134013_2134487_-|hypothetical-protein
MPFLADDTRAALERARELDAAAPSPASALDRLAAVRRLIEALEADAASLTAVRDAVAAGADWAQIGEAAHLSPAAAKARWQGDDAAIAERQQASRKRSARPSAKPTDLPGLSVAEAAEKLGVTAQAIYLRVTRGQLEAQTVELPDGRKYKRVFLPEG
>NZ_CP014145.1|WP_067228386.1|2134738_2135716_-|ribose-phosphate-diphosphokinase
MSGIKSSGEKRLVLVSGRAHPQLAIDIAAELGSDLVPTDARTFANGELYARYDESVRGCDAFVIQSHTAPINEWLMEQLIMVDALKRASAKRITVVAPFYPYARQDKKGRGREPISARLVADLFKTAGADRIMSVDLHAAQIQGFFDGPVDHLFAMPVLLKHFKDKLDPATLTVVSPDMGRVRVADIWSDKLGAPLAIIHKRRDPLVPNQVSVHEIIGPVEGRVCLLVDDLIDTGRTIVKAAEALKAAGAIGVVVAATHAVFSDPATELLQSEFIDEVVVTDTLPLPAEKTWDRLTILPIAPLLARAIHEVFEDGSVTSMFDGAA
>NZ_CP014145.1|WP_067228388.1|2135758_2137186_-|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MTDQNLAIVVLAAGQGTRMKSATPKLLHPIAGLPLVSHVLATAKALDAATIVTVVRHERDRLAAVVSAELPESIIVDQDEVPGTGRAVEQAVAALPADFDGDVLVINGDVPLLDAQTLSQFVAAHRESGASATVLSAVYDDATGYGRIVRGDGGAFDGIVEQKDATPEQLAIGEGNAGVYVFSAAALRQQLGKLTTDNAQGEKYLTDVIGLLRAAGSDVSAVPVAEAWLVAGVNDRAQLSEAALRLNALIVRGWQLAGVTIQDPASTWIDLKATLAPDVTLLPGTQILGATVVATGAIIGPDTTLVDCEIGEGAQVRRSDATLAVVGAAATVGPFAFLRPGTILGTDGKIGAFVETKNAKIGTGSKVPHLSYVGDATIGEHSNIGAGSIFANYDGVNKHSSQIGSHVRTGSHGVFVAPITIGDGAYTGAGTVVRKNIPAGALAISVAPQRNMEGWVHTHRAGSAADDAAQAAQAE
>NZ_CP014145.1|WP_067228391.1|2137546_2138038_+|MarR-family-transcriptional-regulator
MPASDEVDRIVDAWLRERPDLDFTPLQVLSRVGRLAKHLDRARRTAFARSELESWEFDVLSALRRAGEPFQLSPKQLLQQTLVSSGTMTNRIDRLVVRELVQRRTDPNDGRGILVVMTPAGQTRVDAAITRLVDAEAVLLGALSAPEQERLAGLLRKLSLDFD
>NZ_CP014145.1|WP_067228394.1|2138229_2138889_-|ABC-transporter-permease
MDKLIELQPEFWEAAGETLYMVSLTLLFGGLGGLLFGLVLYATRAGSLMPNKAVFVILNVVINFFRPIPFIIFIAALVPFTRLVIGTGTGTNAAIVALSIAASFAIGRIVEQNLVTVPPGVVEAGRAMGAGPLRILTTIVIPEALGPLILGYTFVLVAIVDMSAMAGLVAGGGLGYFAQLYGYRQFEPVVTWAAVLLIVVFVQLAQFLGNKLARKALRR
>NZ_CP014145.1|WP_067228397.1|2138888_2139914_-|methionine-ABC-transporter-ATP-binding-protein
MALVSLRNVTKAYPNPNDGDPILAIDDVSLDIEAGDVFGIIGYSGAGKSTLVRLINALEPVSSGSVVVDGQELAGLPEKQLRPVRLGIGMIFQQFNLFNAKTVWNNVAYPLRVAGASKEKIQARVDELLEFVGLSDKAKNYPEQLSGGQKQRVGIARALATEPRILLCDEATSALDPETTHEVLALLKRVNEEFGVTMVVITHEMDVIQTLATKVAVMDKGRVIETGEVFDVFSDPQNASSQTFVGTVVKGQPSAAEVAVLRERHAGRIVTFSFRDGDASQSSVFLSLAQAGIEFELVYGGINEIQGRAFGHLTLALRGPDAVIDGVLADIAGASEVTEAA
>NZ_CP014145.1|WP_067228400.1|2140057_2140972_-|methionine-ABC-transporter-substrate-binding-protein
MSISKKTTKVLAALATLPLLAALAGCATTAEVGAGSGSADKSETVRIGVVGKSDPQWPAFVEAAAAEGITVELSDFADYAQPNPALSAGDLDLNQFQHIVYLADYNVSAGDDLVAIGSTAIYPLGLYSTKYKSVADIPAGETVAVPDDASNLARALLVLQSAKLIELKDGGSIFSGLNDVIQDKSKVKVQALEAAMTPTLLPDVAAAIINNDFVQDAGLTFADAIAKDDPNDANALPYVNIFAARAEDKDNATYKKLVEIFQTDKGVQAGLLEASGGTALALQTPVADLAASLAKVEADTKAQK
>NZ_CP014145.1|WP_067228402.1|2141186_2143049_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MAHMLGAERLHLEFPTRVIFDEVTVGLNEGDRVGIVGRNGDGKSTLLKLLAGRMEPDGGRVTRRRDVRLAMLDQADTVDSSLTVAQAVVGGIDEHVWAGDPVVRDVIGGLLSDVPWDAIVESLSGGQRRRVALAALLVGDHDVVFLDEPTNHLDVEGIAWLAGHLKRRWPQGSGGLVVVTHDRWFLDEICNATWEVHDRIIEPFEGGYAAYILQRVERDRSAAVSEAKRQNLMKKELAWLRRGAPARTAKPKFRIDAANELIANEPPPRDTVSMQSMAMQRLGKDVVDLIDVTVKFPATEHRGEKTVLNDITWRIAPGERTGILGVNGAGKSTLLNLVAGTLQPTSGTVKRGKTIKVAVLTQQLDELKAIQNDRVSEVIGRQRSSYVAGGKEMTPGQLLERMGFMSSQLSTPVKDLSGGQKRRLQLLLIVLDEPNVLILDEPTNDLDTDMLAAMEDLLDSFPGTLLVVSHDRYLIERVTDQQYAVTEGHFKHLPGGVEQYIEMRKKQVAADADNVGFESVVGSNDNSGASTSAAPSKPAVAAKPKLGGAELRNAQKELASIDRKIAKWQQQIAEIHEKLATHDQGDYDGLGALTAQLSKLENDVVTNETRWIELSELLEG
>NZ_CP014145.1|WP_067228405.1|2143143_2144079_-|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MTLAATSPVVHARAPGKINVFLAVGALQDDGYHDLATAYQAVSLYEDVRAYPADDFSVSFSGSVDTSGLEVDGSNLAIKAARLLARKTGYRGGVRLEIEKNVPIAGGMGGGSADAAASLIACDALWGTELGKDEMHTLAAKLGADVPFALAGGTAIGTGRGDQLSPALAQGNFHWVLAVAEFGMSTPAVYAELDRHRERHAADIRPAAVSPQVDARVLHALRAGDSALLAEALHNDLQAPALHLAPGLGQILELGEANGALAGIVSGSGPTLAFLAPDSDTALELQVALSASRLTAVRAHGPVHGARVIHS
>NZ_CP014145.1|WP_067228407.1|2144088_2144634_-|DUF4287-domain-containing-protein
MAEEIVTGRQDGVSDDALAAATGKTWAEWFAILDAEGAAAWKHSAIARWLDAHYPLGGWWAQGVTVGYEQARGIRLPGQRQDGSFEASVSKTLPLEQLPALDAVVAALAEELGAPASESRAAKYVTARWAMPVGSLLATIAPSKGGKSSAGLTWQRLGGAEDVAPAKARMQGWLQAAAELG

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Crispr_ID: NZ_CP014145_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_7

2256178-2256271

Orphan

Consensus_repeat	Method
CGAGGTCTCGATACGCTCGTTCCTC	CRISPRCasFinder

1 spacers

WYL,DEDDh

The CRISPR arrays of NZ_CP014145_7

>merge|NZ_CP014145|7|2256178-2256271|CRISPRCasFinder
CGAGGTCTCGATACGCTCGTTCCTCGTTACTCGACCAACGGGATGGGCGGAATCCGATGTTTCGGGTTGCGAGGTCTCGATACGCTCGTTCCTC

>NZ_CP014145|7|6|2256178-2256271|CRISPRCasFinder
CGAGGTCTCGATACGCTCGTTCCTC	GTTACTCGACCAACGGGATGGGCGGAATCCGATGTTTCGGGTTG
CGAGGTCTCGATACGCTCGTTCCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_067228603.1\|2258760_2259705_-\|FRG-domain-containing-protein	unknown	unknown	gnl\|CDD\|214898
NZ_CP014145.1\|WP_129586695.1\|2250281_2250629_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067228608.1\|2262330_2263077_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|377857
NZ_CP014145.1\|WP_067228579.1\|2242449_2242761_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067228595.1\|2251597_2252287_+\|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP014145.1\|WP_067228612.1\|2264276_2265674_+\|DUF2252-domain-containing-protein	unknown	unknown	gnl\|CDD\|313268
NZ_CP014145.1\|WP_067228601.1\|2257084_2258647_-\|DUF3375-domain-containing-protein	unknown	unknown	gnl\|CDD\|371764
NZ_CP014145.1\|WP_067228588.1\|2249569_2250106_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067232569.1\|2247393_2249196_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008
NZ_CP014145.1\|WP_067228584.1\|2245745_2246993_-\|hypothetical-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
NZ_CP014145.1\|WP_067228614.1\|2266691_2267141_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NZ_CP014145.1\|WP_067228597.1\|2252677_2256091_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227250
NZ_CP014145.1\|WP_067228586.1\|2247086_2247368_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225973
NZ_CP014145.1\|WP_067232572.1\|2263904_2264201_-\|DUF1905-domain-containing-protein	unknown	unknown	gnl\|CDD\|378097
NZ_CP014145.1\|WP_082717175.1\|2263198_2263897_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|315383
NZ_CP014145.1\|WP_067228605.1\|2259924_2260521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067228617.1\|2267137_2268490_-\|SufS-family-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_CP014145.1\|WP_082716919.1\|2260623_2262135_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|99746
NZ_CP014145.1\|WP_082716917.1\|2242997_2245745_-\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|182930
NZ_CP014145.1\|WP_067228592.1\|2250787_2251516_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378924

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_067228603.1\|2258760_2259705_-\|FRG-domain-containing-protein	gnl\|CDD\|214898	smart00901, FRG, This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised.	1.3133e-17
NZ_CP014145.1\|WP_067232569.1\|2247393_2249196_-\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	3.68315e-25
NZ_CP014145.1\|WP_067228608.1\|2262330_2263077_+\|HNH-endonuclease	gnl\|CDD\|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	7.19577e-27
NZ_CP014145.1\|WP_082717175.1\|2263198_2263897_+\|alpha/beta-hydrolase	gnl\|CDD\|315383	pfam12695, Abhydrolase_5, Alpha/beta hydrolase family. This family contains a diverse range of alpha/beta hydrolase enzymes.	4.11379e-39
NZ_CP014145.1\|WP_067228595.1\|2251597_2252287_+\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	4.7515e-38
NZ_CP014145.1\|WP_067228612.1\|2264276_2265674_+\|DUF2252-domain-containing-protein	gnl\|CDD\|313268	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252). This domain, found in various hypothetical bacterial proteins, has no known function.	1.06116e-149
NZ_CP014145.1\|WP_067228601.1\|2257084_2258647_-\|DUF3375-domain-containing-protein	gnl\|CDD\|371764	pfam11855, DUF3375, Protein of unknown function (DUF3375). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 479 to 499 amino acids in length.	1.93989e-86
NZ_CP014145.1\|WP_067228614.1\|2266691_2267141_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.4523e-47
NZ_CP014145.1\|WP_082716919.1\|2260623_2262135_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|99746	cd06453, SufS_like, Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.	3.27746e-100
NZ_CP014145.1\|WP_067228597.1\|2252677_2256091_-\|hypothetical-protein	gnl\|CDD\|227250	COG4913, COG4913, Uncharacterized protein conserved in bacteria [Function unknown].	3.05348e-87
NZ_CP014145.1\|WP_067228586.1\|2247086_2247368_-\|hypothetical-protein	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	0.00079957
NZ_CP014145.1\|WP_067232572.1\|2263904_2264201_-\|DUF1905-domain-containing-protein	gnl\|CDD\|378097	pfam08922, DUF1905, Domain of unknown function (DUF1905). This domain is found in a set of hypothetical bacterial proteins.	8.00584e-25
NZ_CP014145.1\|WP_067228617.1\|2267137_2268490_-\|SufS-family-cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP014145.1\|WP_067228584.1\|2245745_2246993_-\|hypothetical-protein	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	8.18874e-47
NZ_CP014145.1\|WP_082716917.1\|2242997_2245745_-\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|182930	PRK11054, helD, DNA helicase IV; Provisional.	3.15472e-62
NZ_CP014145.1\|WP_067228592.1\|2250787_2251516_-\|alpha/beta-hydrolase	gnl\|CDD\|378924	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family. This family contains alpha/beta hydrolase enzymes of diverse specificity.	5.86151e-08

>NZ_CP014145.1|WP_067228597.1|2252677_2256091_-|hypothetical-protein
MSDSPLFYIDGATEGTTQWRAETFQMVNWGGFHGHHSVALAPTATLVSGASGTGKSTLLDAYLALMMPSDTPFNGASNDAGSGRARSAEQRNVLTYLRGKTDDNREAETGALQDQVLRGAAEPTWGAIAMTFVDDNQRRFTVLRTYYAPRATNSYSEVSMRMATFDGALHLGELEDVVAAKFEKRALKARFSGIEVFDTYAAFAQTLYTRLGIGANGEGGKALRLLARIQAGQQVKTVDGLYKSMVLERPATYAAADKAVAHFEDLERSYGAMVTEHQKAQVLERLPELQRQFIEASDRADLVDTFGVTRSGDTPLRYWELGTEQRLLADAGDGNRSERKRVQAELSAASTAEKELKARLAESQRRQRENGGDVLAELQADLATLTDSRDERVRTRARFDDRVAVLAQPTASAAEFAAAQAAAADALAAFPAEQEKAEALHETLRRQQYPLEEQIRTLKKEREFLAGRHSLVPQHLHNARLAIAEAAGMAPDELPFAAELIDLAPGEDRWRQAAEVTLGSVARILLVDETKLAALSKAIDPLQLPVRVHFEGVPLSVADAGSSSHPLDPAFVSGKLVYKESPFSGWVQQRLRLASLDARCVETPAEFDGDGPFVALSGQTRNGSRGAHGMNRDQKPIIGFSSQARQDEIEQELGQLTSSVQQLSGQAHALANELSALRARRDASQMLTDAVWELLDVAAAEAALAAKNAELARVLANSDVLRALQEEEQRLELELEIAQGQRHEASRVAQELAAAQAEIVEREDAVNDQLERIGAEQQVTLTEEQGDHLDAEFAAVGDPDNLESFAAGLKRLRERLTEQSASERERAEQSAKAMLNIFESYQRAWPDPTIGTGLDSYQGYRDILDSVLTLGLHERRQEWKRRLAAWSGQDLVPLAGAFDSAISQIEDRLDPINDILATLPFGAGRDRLQITLRRLHRDDSVAFRRELKQLSSGATEQFTDEQTEERFLRLQAFMAGIRRPEDESKPSPTRDLLLDVRRHVEVTASRLGDGDEVLSTYSSLGGKSGGESQELVAFVVGAALRFQLGDESRTRPRFAPVFLDEGFVKSDAEFAGRAVAAWKGLGFQLIVGAPLDKVTALEPYMDLVLSITKNHAAGFSYITPIADAAVSLVEPVETALA
>NZ_CP014145.1|WP_067228595.1|2251597_2252287_+|WYL-domain-containing-protein
MKRTERLHALTETLRRASVRGRTAQQLADEFEVTTRTIKRDLDALEASGLPIWARTGPGGGYGLAEITSLPPVNLTAAQALALNTAVAVATQAPYSDSARAAANKIRDVLDQGTRRRAAELSLRVWVDVEPSAPRRVMTVLEKALVDQVTVNIDYVDARGHATRREVEPMIFAFTGGRWLLVAWCRLRDDVRWFALHRVERATATRRACSGHSIDDIGEPPASARAVGG
>NZ_CP014145.1|WP_067228592.1|2250787_2251516_-|alpha/beta-hydrolase
MDVTTNTLPSIILVPGHWLGAWAWDAVASELRARGHAVTALTLPGLDPDDPERSSRTLDDQVEALGKAVAAASGDGRAVVLVAHSGAGIPVSVLLDQNPTAVSRVVYVDSGPVSDGSAFDRDFPVDQEELELPPFDQLQASLDGLSESDLRRFRERAVPQPGPAMRQVVRLTNDARRDVPSTIIACSFPSEVLMQMARAGNEMLAETASLRTLELVDLPTGHWPMWSRPAELAAAISTAAVR
>NZ_CP014145.1|WP_129586695.1|2250281_2250629_+|hypothetical-protein
MTEATCAALAAVFPLVLITIVLEQRSVHVNIRSRAWFEKTTIAVVSISLAGLVASIVGVQLGGLEALSAWPLWLLFLAAVVGLAFLLIAVLATSSIEAEAGAAKLAKRKKRMKRV
>NZ_CP014145.1|WP_067228588.1|2249569_2250106_-|hypothetical-protein
MLVDGQRHQYIPKAEGEAGKVARLLGERMPHPVPVRPLIVLVDPKRITVNERPERVRVLNSHEVRRWLKQQPEMLNPAAVTDLLATIDDPNLWRATDAGDPPEARRQFAELHAEVRAARGWRRLWALAGIAGLLALAAGALVLLPARMPSSSAHSLLVSAASIVAASTPARVAGASRA
>NZ_CP014145.1|WP_067232569.1|2247393_2249196_-|DUF262-domain-containing-protein
MIKSVLNYPVYSLLSPENTVVYTVPRYQREYSWAKPQWDELFDDLVEADPQSGHFLGTIICVDRTVDSAKEIVVELIDGQQRMTTLSILLAAVYALLAKEEGELDEDDKVDLSNLRRQLALRGRGGSKAAARLRPQRQNSNYEDYLNVLVDAGVQVEAPSVSNLGNRRIMRAYRHFQARLENHIVEREESRVSTLLGILENVKNAVLVKLEVGNYADAYVLFESLNNRGLPLTPIDLIKNNLLSSSEIDGDDKVEGAFDRWKELLEDLGDDYSNQERFFRQYYNAYKSQWPVIPGVAIATKSNLIKVYGELLDHDLDRLLTQLTRAGRSYRRILGRMDVGASTTAFDAALADLARAQGSPAYLLLMYLENEREAFRLDDSQMALVTQTLTRFFVRRNLTGHPQTNILTRLFMELVGSINRREPDADIVELVAVALRAVAASDELMLNALRGPIYDLNADTARFILIALAKESETKEIWADLWVRENKKYVWSIEHVFPQGENIPDAWVAEMGGNLDEAKRIQERMVHSLGNLTITGYNSTLSNKSFAEKRDRKDQRGNYIGYKNGLNLNAGLAVAEHFNQNDIAARTDELAARAMKLFDL
>NZ_CP014145.1|WP_067228586.1|2247086_2247368_-|hypothetical-protein
MVNYERIDPQNGPAACPTHDAAFEGFLFSVTDDGRIQRSSQLEAAIERDARFRHNFGEAGLSNTLLLPSGSHGPGPDYLAWHRTQMASAQVAA
>NZ_CP014145.1|WP_067228584.1|2245745_2246993_-|hypothetical-protein
MASAGFAVIDFETTGFSPAKHDRVVEVAVVHVNELGRVTGQWETLVNPKRDIGAQHIHGIRARDVLNAPSFDDIAGHLVELLDGRVVVAHNASFDSRFLVHELARSGYEIGPQLHTLCTMQLAAELIPGAGRSLADCCAAFDIDLDDAHRASADALATARLLGEYIGATDADDFWFRQIDAALADPWPPRALARHRDEVWRPRGFASAPEPTSFLERIAIKLPELAGPAEHQEYLALLDRCLIDRLLSAHESDALVRTADELSISRETCARLHHEYFDALTRIAWADGVLTTDEIADLAAVAKLLSIEGAYLTAAFQQPAALVETGNDARIAIVPGAFQLSHGDHVVLTGEMSRPRDDWHRDLTARGFVPKPAITKKVALVVAADPDSLSGKARKAREYGIPIVGESTLATLLGQ
>NZ_CP014145.1|WP_082716917.1|2242997_2245745_-|UvrD-helicase-domain-containing-protein
MQKLWEPSALARRLGGVRAPAWKLAIDGEALVATQGSRPGDAFAECDLGSGFEIRQLRGFPWSALEFTTGSSVLRLERLSAARARRIVTAVQDARRELIASRRESALRAALSTAVQRGAEWSSALAAAIKEQFRRHGWLTREFAAEWEQRRAAIGIGPLLDEPLLADDISKLRRSGSLGIHSWTLDLPRHIAEHNGAYLESELLANKHFFDLVEKSPLTPEQATAVVCFENRVLVVASAGSGKTSTMVAKAGFAVSRGLIAPEKILMLAFNAAAAAELRQRTIDRLAPLGIGAETISARTFHAFGLEIIGQATGRKPTLAPWLEGGGDLKRLGEIVSDLRAQDGGFRREWDFFRAVLARDYKDARHESEASSAAEAALFTTAKGEDVKSSGERLIADWLFFNGVDYVYERPYEIDTADELHGQYRPDFYYPAIGTYHEHWALDEQGQPPIEFDGYLDGIHWKRQLHKAHGTALLETTMAELWSGRALSELSEQLTRRGIHLSFNPDRPTRGEKVVENERLVATFRSFLTHAKSNRLSDEQLRAKLESERDGEVRFRDASFLSLFAKIRSEWQQRLAAEGCIDFEDMLNLSADHLEEGDWQSPYELVMVDEFQDASNARARLARALVAAPGRHLFTVGDDWQSINRFAGADISVMTRFESWFGPSEVLRLERTFRFPQSIADASSQFVLKNPEQITKSVLSAAAEHPPTFQVISVDKDDSVAPALRHWLTVLHKQIVSGQISQPHGRPVSVFVLGRYRHQDKYAAGLNGVSELIDVRFMTIHASKGAEADYIVIPGMVSGKWGFPSTIPTDPVLRLAMPDAETFARAEERRLFYVALTRARRKVLLMTVEQRESRFLMELIADRGLIRTNAIGEPLESTVCPNCERAFMVRRVSKRGAFLGCQRYPRCKGTAPVPN
>NZ_CP014145.1|WP_067228579.1|2242449_2242761_+|hypothetical-protein
MHSLFDDDPDIPDPDEARPRPMLESQRSQIRDAFGALGLTTAREQFALVEELTGVRLNRVTDLTENAARTLMYALKGRAQNAGRSNTGDSWADREEDTWIDRL
>NZ_CP014145.1|WP_067228601.1|2257084_2258647_-|DUF3375-domain-containing-protein
MSDIAGELARVREAFDKPTLRLLDRKWAPFVLAVFKSSFSRDRAAVQCERLHAQVDAYLADLRSIGTETPNGTGRSLCVQWMNDQWLYRDLGDDGEGGGTSANAEEQYSLTSHALEALSLVESLARDRALISESRLAMIVDAVRHRATQANPDRDERLRRLDLQIAELASERDRVAGGGEIAAASVEEMREGYANLIDLIGQLPGDFKRVEESVAAMHRQIVNDFRAEERPIGEVLDEYLAKTDALMSLTAEGRAFEGAFELLRDDALLHDLKGDLETILGHPFAAGLKSVERRSFGATVGLIRTGIDDVLTQRNGLTTTLREHIVNHDIVKDRELEGLLREINTELAIWMQTAGPKARVRAEIMPGNLDAPHLRERFYDPQSHVPPAPLADVSAQAPAAPSLDAMRRQGGPQLPEMREALLGALAALDASTDAADASIGDVFNALEPALRRPVEILGLMQLATQLDAVGHAGSVEQPEFDQYLTVRPDGTQRTFEVARITLTDDETAALAALNSGATSD
>NZ_CP014145.1|WP_067228603.1|2258760_2259705_-|FRG-domain-containing-protein
MESYRNTSTGWVSPASVWEPWDIPVHSWEQFLEQTRALTETHGYRDMLWRGSGNADWALFSSLYRTLLDASPTRTPPTEDQMVAAEVETLRLAREDWRFDDMPALELLARLQHFGAPTRLVDVSENPLVALWFAVERALNTADADARVFAFAKPATRITLNSVWGGRDLRWHELTNDVRRLARRWGTGSLKYWRPPAYDSRISSQNAGFIVDGAPFAFEGDRQLRSARGRSMPWSTEDLRHTSSLALRLSHIERDPISESSAPVFTFRIAREAKAEIRQKLEANFGYRASTLYSDMVGLSDYLTRHIGSGATLE
>NZ_CP014145.1|WP_067228605.1|2259924_2260521_-|hypothetical-protein
MTERPLLVTTVAHARAGLSGALRRFRADPEGAQPVVLGSHRRAEAVILPFARYEKIVFAAPLEPARPAGTAEGELPALPAGVSPEDLAERWLNGLIAAVDAGTEIVERGRAAFRSDAALPLACEALIARVGELARLLTRLDPVRFDDPMWTLAAHNRQIVVHQDNRVDEQSIWMLITEGFPEIAEVAASVRLPREHAR
>NZ_CP014145.1|WP_082716919.1|2260623_2262135_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MGAPGLASGSIAADAAGARSAPAEPSRAHDDPRLALVGSDTEVPVVSGETRRFVNLDYAASAPALRVVHDAVEELLGWYSSVHRGAGFKSRASTAAYEGARESIRRFVGGRPGDAVIITRNTTDSINLLAASLPPGTHVVAFAGEHHANLLPWRRLQAHYLPAPASPELLLDRLAATLKALPHGAAARLVAVTGASNVTGEIWPIAAIARVAHEHGARVLVDAAQLAPHAPIDMAGDDIDYLAFSGHKLYAPYGAGALLGRRDWLASGDPFLRGGGAVKLVSIAETLWADLPERQEAGSPNVLGAVALGVACDTLAAVGMARIAAEERVLLDRSLERLARVDGFHALRVWPAEHPRVGLVTFAVRGLPYDLLAAALSAEHGIGIRHGCFCAHPLMVSLLEVSDAEVHRLFDETRLGHHERLPGAARASLGVGSTLADVEALGTALDSLVADGPQWTYAVAPDTGMYEPDPDPRPLPALGMRLVEHPTEHASLLGHPHSHGESA
>NZ_CP014145.1|WP_067228608.1|2262330_2263077_+|HNH-endonuclease
MSTKANTRRTLSRRRRALAGWAVVPVLLAIGIAAVTALTEPAETAPAAPAPPAASGTALEQLGTLPVKGRAPKTGYDRTVSFGTAWRDVDQNGCDTRNDVLARDLTAIDRPAGCRVLSGRLADPYTGTTIDFVRGQGTSQAVQIDHVVALMNAWETGAQQLTVERRTELANDPLNLLAVEGRANSQKGAGDAATWLPPSKGYRCEYVARQVAVKANYNLWVTQAEHDAIEGVLAGCPGQPAPAQNPPA
>NZ_CP014145.1|WP_082717175.1|2263198_2263897_+|alpha/beta-hydrolase
MLVLLVVGVLFWAHTVMMGERPASLEVWSDPAITVTATDHSVVLSPSGDPSGTGLVFIPGAKVDPYAYMYKLAGIVEQTGATVVITKPTLNLAFFDTRPLSTFTADAPAVDEWYVGGHSLGGVRACQLVDAPDAAADGVVGLVLFGSYCANDLSGTDLRVLSISGSDDGLSTPQKIDAAAHLLPGDAVFVEVDGANHASFGDYGVQPGDGTATIDDTQMRREITDALQAFGL
>NZ_CP014145.1|WP_067232572.1|2263904_2264201_-|DUF1905-domain-containing-protein
MRFEFTSPLWEWSSQGASWFFVTLPEEASEDLREIPRMPRGFGAIKVRVTVGGTSWLTSVFPDSRTGGHWLPIKKAVRVAEGLEDGEPVAVRLELVEL
>NZ_CP014145.1|WP_067228612.1|2264276_2265674_+|DUF2252-domain-containing-protein
MSPISTAVDAQHLSQAESMVEGRAMRALTPRRDLAEYIPSERDPVALLAEQNADRVPELVPLRMGRMLASPFAFYRGTAGLMAADLARCATSEIEVISCGDAHISNFGLFASPQRNLVFDLNDFDEAGPAPFEWDVKRLVTSVIIGARDAGFSEPEAREAATQAALNYRRVLTGMMRLTVLERYYFRADTDQIRAGLGRSGQRMLDRAAKQARKRTSEAFADKVTETMPDGRLRIIENPPLLQHLDSERGGAVADLFAQYRQSVPADIAVLLAQFTLADVAMRVVGVGSVGTRCFVLLLTGPQGERLVLQIKEAPPSVLETWGGRDAHRLPTPARGPEFADNEGFRVVASQRILQAVSDSFLGYFRADNGRDFYVRQFRDRKGSIDIEGLSVGDFGTYANGCAALLARAHAQSASAPAVVGYLGSGDNADRAIVEWSFAYAEQSLADFTALQAAVAAGRVEATAG
>NZ_CP014145.1|WP_067228614.1|2266691_2267141_-|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MSALDGLYQQLILDHSKKRSGDGVLEHADAQHFERNPSCGDEITLQLAMEPGTDRVAALGWTGAGCSISMASASVLAEMAPGMTVEELRALIGEFREMLRSRGAGEPDDEVLGDAVAFHGVSKFVMRIKCAMLAWVATEACLLEVRPLA
>NZ_CP014145.1|WP_067228617.1|2267137_2268490_-|SufS-family-cysteine-desulfurase
MSSLASPPHAASALGDAEVLELRRDFPALSAEVNGQPLAYLDSGATAQRPVSVIDAEREFLVTSNAAVHRGAHTLAGLATEAFEDARATLADFLGADPDEIVWTSNATDALNLVAYGIGNASRGRGGEAARRFALAAGDEILVTEAEHHANLIPWQELAFATGATLRFIPVDDDGIYTLADAAAALTERTRIVAIGHVSNVTGFIAPVAEIAALAHERGALVVLDACQSAPHRRLNVAELGVDFLALSGHKMLGPSGVGVLWGRGELLNALPPFRTGGSMISTVTMTEATYLPAPQRFEAGTQPVSQAVALAEAVRYLERVGLERIDERENELAQRMLAGLALIDGIRIVGPAAGVPRAGLVSFDVDGVHAHDVGQYLDAQGIAVRVGHHCAQPLHRRLGLTATTRASAYLYTTTEEIDRFLAAVAEVRPYFGVATPAETSISTVTGASA

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Crispr_ID: NZ_CP014145_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_8

2579925-2580066

Orphan

Consensus_repeat	Method
CCAACTCCGGTTGGGCGTTTTTGGTTTCACCCGCAGGGCACGCGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014145_8

>merge|NZ_CP014145|8|2579925-2580066|CRISPRCasFinder
CCAACTCCGGTTGGGCGTTTTTGGTTTCACCCGCAGGGCACGCGCACAACACCCACACGCGGCGCCCGAATCCCCCACGCTCCGCCACTGAAACGCCCAACTCCGGTTGGGCGTTTTTGGTTTCACCCGCAGGGCACACGCA

>NZ_CP014145|8|7|2579925-2580066|CRISPRCasFinder
CCAACTCCGGTTGGGCGTTTTTGGTTTCACCCGCAGGGCACGCGCA	CAACACCCACACGCGGCGCCCGAATCCCCCACGCTCCGCCACTGAAACGC
CCAACTCCGGTTGGGCGTTTTTGGTTTCACCCGCAGGGCACACGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_067229205.1\|2566164_2566983_-\|thioesterase-family-protein	unknown	unknown	gnl\|CDD\|379298
NZ_CP014145.1\|WP_067229248.1\|2590340_2591504_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP014145.1\|WP_082716952.1\|2571709_2574079_+\|pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|225329
NZ_CP014145.1\|WP_067232682.1\|2586435_2587683_-\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP014145.1\|WP_067229233.1\|2581010_2581874_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226100
NZ_CP014145.1\|WP_067229231.1\|2580474_2580975_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067232677.1\|2578801_2579506_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP014145.1\|WP_067229225.1\|2575967_2577263_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP014145.1\|WP_067229214.1\|2571074_2571575_-\|AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|214628
NZ_CP014145.1\|WP_067229222.1\|2574984_2575959_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP014145.1\|WP_067229237.1\|2581886_2582498_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP014145.1\|WP_067232684.1\|2587951_2589172_-\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP014145.1\|WP_067229245.1\|2589287_2590289_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP014145.1\|WP_067229243.1\|2585729_2586410_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP014145.1\|WP_067229228.1\|2577325_2578570_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_CP014145.1\|WP_067229240.1\|2582528_2584319_-\|DUF853-family-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP014145.1\|WP_067229208.1\|2567843_2568968_-\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_CP014145.1\|WP_067229211.1\|2568964_2571070_-\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|235537
NZ_CP014145.1\|WP_067232680.1\|2584365_2585661_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224662
NZ_CP014145.1\|WP_067229218.1\|2574151_2574988_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_067229205.1\|2566164_2566983_-\|thioesterase-family-protein	gnl\|CDD\|379298	pfam13622, 4HBT_3, Thioesterase-like superfamily. This family contains a wide variety of enzymes, principally thioesterases. These enzymes are part of the Hotdog fold superfamily.	3.34904e-30
NZ_CP014145.1\|WP_067229248.1\|2590340_2591504_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.81044e-59
NZ_CP014145.1\|WP_082716952.1\|2571709_2574079_+\|pyruvate-dehydrogenase	gnl\|CDD\|225329	COG2609, AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion].	1.56354e-146
NZ_CP014145.1\|WP_067232682.1\|2586435_2587683_-\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.65916e-87
NZ_CP014145.1\|WP_067229211.1\|2568964_2571070_-\|phosphate-acetyltransferase	gnl\|CDD\|235537	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed.	0
NZ_CP014145.1\|WP_067232677.1\|2578801_2579506_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	2.11977e-39
NZ_CP014145.1\|WP_067229225.1\|2575967_2577263_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.42667e-67
NZ_CP014145.1\|WP_067229214.1\|2571074_2571575_-\|AsnC-family-transcriptional-regulator	gnl\|CDD\|214628	smart00344, HTH_ASNC, helix_turn_helix ASNC type. AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli).	4.74376e-21
NZ_CP014145.1\|WP_067229222.1\|2574984_2575959_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.59849e-77
NZ_CP014145.1\|WP_067229237.1\|2581886_2582498_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.75488e-09
NZ_CP014145.1\|WP_067232684.1\|2587951_2589172_-\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	4.8284e-44
NZ_CP014145.1\|WP_067229245.1\|2589287_2590289_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	4.20701e-34
NZ_CP014145.1\|WP_067229243.1\|2585729_2586410_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	9.60275e-28
NZ_CP014145.1\|WP_067229228.1\|2577325_2578570_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	3.14768e-34
NZ_CP014145.1\|WP_067229218.1\|2574151_2574988_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	6.60099e-81
NZ_CP014145.1\|WP_067229208.1\|2567843_2568968_-\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP014145.1\|WP_067229240.1\|2582528_2584319_-\|DUF853-family-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP014145.1\|WP_067232680.1\|2584365_2585661_-\|ATP-binding-protein	gnl\|CDD\|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	8.82083e-54
NZ_CP014145.1\|WP_067229233.1\|2581010_2581874_+\|hypothetical-protein	gnl\|CDD\|226100	COG3570, StrB, Streptomycin 6-kinase [Defense mechanisms].	9.45342e-75

>NZ_CP014145.1|WP_067232677.1|2578801_2579506_+|FadR-family-transcriptional-regulator
MSAIDDAFHGLRQMIASGELQPGQQFPSEAQLCDRLQVSRGSLREGVRMLGALGVIESRHGSGTYVSALEPANIIGALGLTVGLMPLEGLIDMFESRRVLESHATAQAAANMTDAVAAELSGILDALELASEQEQASDLDAQFHEKITGLAKNATIAELLRVFRSRSRSYQLFDLPAGPDIKAQSDHSHREILAALIARDPATAATAAASHVLQTERWAREHRPAAKPGPLSAD
>NZ_CP014145.1|WP_067229228.1|2577325_2578570_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MTSTNAPSRPTAALAPSPLTLPGGAPAAGAWTLSESALHINHGSFGAVPRVAQLRQNELRAEMDADPVAWFSFLPERIGAVRREIAAFVGAPAEHTAIVPNASAGATVVYSSLSMDRGAEIVVTDHGYGAVTMGAERMARRYGGTVVTAHVPLHATPAEAHEAVMAACSGRTRLIVIDHITSATARFMPVAEIAVSARARGIVTLVDGAHVPGLYDNPLDGVDCDFWIGNLHKFACAPRGTAVLLAPTELRSELYPLVDSWGSPLEFPERFDTQGTLDLTSYLAAPTATGFIADTWGWGAARRYITELADYAEDLVAAAFAERTGEDHRVDVGSPVSALRLVRLPDGLAGSHPTADALRNRVVSEFNIEGAFTSFGGVGYFRLSAHVYNTAADFEEFVERMVPTLCDWARDAER
>NZ_CP014145.1|WP_067229225.1|2575967_2577263_-|sugar-ABC-transporter-substrate-binding-protein
MTKRKLLAGLGLGLVTALALSGCSAPAGDGKVTLQLVESLTSPARTELLTKLIGEFEAQNPDINVDLISPPTDQADQKIQQMLQSGSGVDVLEVRDLTVGPFSANGWLSDMTTEFDGWDGWDSLTPNAQSVATAGGKMYFVPYGFYGISLFYRTDMVKDAGFDGAPVSWDDIVEQATAIQDPAANQYGYAFRGGKNGYTNAVLAISAYVAGDIDVTNAYRLKNGDSIFSAPEALDAMDTYLTLFKQASPPSSVAWGYPEMVEGFTNGSTGFLLQDPEVIAAVSESKAITAEQWNTAPMLVGPSGKAIQPLATAGWGTAEASEHKAESARLIQFLNSGDASIEFTQKNSLVPILTGAADDPFYKTGAWASYLYMNENPDVYITAEQPRGVAWFTEWADKADTELQQVLIGQMTNKELLASWDSYWAEKWAAE
>NZ_CP014145.1|WP_067229222.1|2574984_2575959_-|sugar-ABC-transporter-permease
MSRHTTTATGRPFTRAGAPSVSPQKTTRRRSFSTRRGLVIAAFMAPAAVFVALFTYYPMLAGSQMAFRNWNLNNLSNTDWVGLGNFQKIFADPNFYVILGNSVLWVVASIVPQFIIGFALALWLRRKFVFRGLYQALIFFPWAISGFLIGILFRWMFNGEFGVINDLLMKAGLIDTAIPWLAEPGTAMTAVIIANTWYGVTFFAIMILAALQSVPDEVYEAAALDGSGKVRTLFSITIPYISTTLALTVLLRVIWIFNFPDIIWAMTGGGPANQTHIITTWMISITQRGDYGQASALGLIVVAILLVFSAFYLMAIREKKGARS
>NZ_CP014145.1|WP_067229218.1|2574151_2574988_-|carbohydrate-ABC-transporter-permease
MINHETPAARVVRIVFLGLWLVISLFPLYWILITSFKTPGAIFSYPLTYWPEVFSLENYISLFQKSSFGTYVFNSLLVATVAATVATFISMLSAYVLARFEFRSKGAVLMAFLVTQMIPAFIALGPLYLMMVQLKLVDNRFGLMLIYIAVCIPFSTIMLRGFFANIPDALEEAAMIDGCSRFGALFRVIIPVMKPGIIAAFIFNFVNCWNELFLSVTLMNKDENKTIPTALNGFISSFTIDWGSMSAAAVLTIVPTMILFAFASRYIVQGLTAGAVKG
>NZ_CP014145.1|WP_082716952.1|2571709_2574079_+|pyruvate-dehydrogenase
MSVTLSPAAPPTEAAAAQSDALLAAIEQRVLWLATASIHHANHVRPNPLGLKVGGHQASCASMTTIMTQLWFEQLRSGDRVSVKPHASPVLHAINALLGELDPAALAGLREFGGLQSYPSRTKDPDPVDYSTGSVGLGATAPLWGAIARRYVDNHGGRAGTGRQYALIGDAELDEGAIWEAMGDPAVEHLGELVWVVDFNRQSLDRVVPAVSVTKLTAMFEAAGWQVLVAKYGRLLEGLFARPGGERLRARIDTMTNPEYQRLLRSSDEQLLDRLCADSWQDLRQLLADVGPAELRAAVGNLGGHDHDTLRQAFAAIDDTRPTVVFAYTVKGRNLPMEGHPQNHSAQLTPAQFEQYAASVGMDQARPFQIFEPGSAEGALCAERAARLRREPVPAAGAFAPPTDLGWVPRGTSTTQAALGRTLLDLTRRAPAIAERVVTVSPDVSSSTNLGGWVNKAKVWSAAPSKDWFDDDPETILHWEESAEGRHIELGIAETNLVGLLGELGATWSRWGFPLIPIGVVYDPFIARALEPWTFGMYAGGQSILVGTPSGVTLAAEGGAHQSLLTPAIGLQQPGLLSYEPAFALEVEWMLLECIRRIGIPGGSSSYLRLSTRPVQQGLAEVPALPEARELRRRQVLAGGYLLRSPEAAQAPHATIAAMGALVPEALAARDTLAEAGVHVDVVCVTNAGLLFEALQARTGQASGEAGSTDAGEWILRDILPAHRAAPLVTVLDGHPHTLSFLAGVNGVPAAHLGVSRLGQSGDLESVYRSHGIDAASIVRAVLRGIAQG
>NZ_CP014145.1|WP_067229214.1|2571074_2571575_-|AsnC-family-transcriptional-regulator
MTDRVIDSTDAALLLALADYPRATAVALAETTGLARSTVHSRLNRLESEVLSDALRRVDPASVGLPLSAFIFAHVTQQKLSQLPESLALIPEVIEVFGVSGDWDLLIRVAAADADDLYRVADLVLSTPGIERTSTVLAMKHMVPYRTQPLIERVRAGARGADARLL
>NZ_CP014145.1|WP_067229211.1|2568964_2571070_-|phosphate-acetyltransferase
MAGSIYITSVEGHSGKSTIALGTVDTLSHQVRRVGVFRPIARSIAERDYVVELLLGHDSVNLDYEECIGVSYDEVHEDADAALSRIVERYKAVEAKCDAVVIVGSDYTDVGSPTELGYNARIAANLGAPVLLVLGGRSSQVSGEHLGQADPRTPAHMSDIAELALHELHAAHATLLAIIANRADANQLDAVRDAIIRAKPLVPVWVIPEDPYLIAPSMESIMKATGGVLIKGDPELLAREALGVVVAGMSMVNVLPRLTQGAVLVVAGDRTEVLLAAMMAQTSGTFPSIAGVVLNGGFELPDPIERLLDGLPQTLPIIRTGLGTYDTIVAITRTRGRLAADSQRKYDAALALFEQHVNAKELLGLLDLSRSTVVTPLMFEYGLIEQARHAKRHIVLPEGGDDRVLRAAATVLARGIAELTILGEPIEVHSRAIELGLDISAATVVSPFDDVLRFKFAEEYAKLRAHKGITLEQARDTVTDLSYFGTMMVHLGLADGMVSGAAHTTAHTIRPAFEIIKTRPNVSVVSSVFLMSLADRVLVYGDCAVIPDPTATQLADIALSSAETALQFGIEPRVAMLSYSTGESGSGVDVEKVREATALVRERRPSLPVEGPIQYDAAADAAVAASKMPGSAVAGKATVFIFPDLNTGNNTYKAVQRSAGAVAMGPVLQGLNKPINDLSRGALVQDIVNTIAITAIQAATS
>NZ_CP014145.1|WP_067229208.1|2567843_2568968_-|acetate-kinase
MSAVFVVNSGSSSLKYQLVDLETGKARLSGMIERIGEPDSFISNHSEAMNVVLAKLGTVDDLIAVGHRVVHGGSEFDGPTLVTTEVEREIEALSRLAPLHNPANLLGIRAAKQALPDVPHVAVFDTAFHQTMSPAAYTYAIDKDIAREYKVRRYGFHGTSHKYVSEQAAIMLGKPLAAVRTIVLHLGNGASATAIDGGKSVDTSMGLTPLQGLVMGTRSGDLDPAVLVHLNRAAGLSIAELDVLLNKQSGLLGMTGMGDMRDVQDAAINGNEEAELALQVWRHRIRHYIGAYYAQLGGLDAVVFTAGIGENNALLRRRALAGLAHLGIEIDNDRNELASRTARVISPAGAKVTVMVIPTNEELEIARQVESLLA
>NZ_CP014145.1|WP_067229205.1|2566164_2566983_-|thioesterase-family-protein
MSEQFASDGKVPAPAYFERTGPGRYRPTAHAGGAWNPGEIHFGPLSGLLVHAIDQHRAAQGAAAAEMQLGRVSFDILGFLADAEIEVQVETVRPGRTIELVEARATIAGRTAALARAWFVATNDTAAVAGGETTPLPAPDAAAPMSMAETWSGGFVASIETRVVGVPQPGRTTAWLSTQTALVAGESTTAHAAYIALVDTANGIAVRQSPTEWMFPNLDLTIHLYRQPVGAWVGLDTSVTFGPDGHGLTSTVLHDIAGPIGRAEQLLTVRPL
>NZ_CP014145.1|WP_067229231.1|2580474_2580975_+|hypothetical-protein
MFTQSGLAILALLIPIFAVLYWLTIPSGGWLIVVLFKLIVIAVIARFVLIYHQAGVFVSPVGVRESGFTGLRRQIHANEIESLLLVSMYSGLTVDVEEHLFVIGHDGRTLLRMRARYWSHDAIGRVIDTLDVPATIIRDPQTINEFRREHSKLLFWFERRPRRSRR
>NZ_CP014145.1|WP_067229233.1|2581010_2581874_+|hypothetical-protein
MTTDCASAPLEDYLERWSARPAGQAFATASSILQPVLWTPASRETPLPAMLKLARAGAAGDEERAGFALQLWWNGDGAALVYEHDTDAVLLERAQGPRSLAAMASRTAADDDHSLRVLCQSVAGLHRPRSAPLPPLVPLEDWFAELFEHAEEWGSVYLRGADLAAELLDGPGESVVLHGDVHHGNVLDFGTRGWLAIDPKALIGASEFDYANMLCNPVPAHAAEPERLARRVQTVALASGIPVGTLLRWVIAWTALSATWHRTGGDTAAAARTLAIGDTATRLLLEV
>NZ_CP014145.1|WP_067229237.1|2581886_2582498_-|GNAT-family-N-acetyltransferase
MLEIRPYRPSDRAAVYDICVRTADAGGDARGQYSTDDLMPDVYAGPYLEYAPELVTIVSTGAADGDQAVGYLIGVADTADYVRWHRQHWLPDFTARYAGHPKDAAEAGVIAAGLHPEKLLIAELDAYPAHLHIDLLPEAQGQGLGRVLIDGLLGTLRERGVPGLHLAYSPHNTGAAAFYARLGFRPLAASSADAPLVGISTGR
>NZ_CP014145.1|WP_067229240.1|2582528_2584319_-|DUF853-family-protein
MTDDAVAAAQSAAAEAAEAARVLQAQAEEAIKKAQDAAAAALAAAEAAQAAAPAPAAVPVSTSGVPAASGPLDPGHVETIRSGYAFEGVALEMGALVNGEALPDVPVRIPLAMTNRHGLVAGATGTGKTRTLQMLAEQLSSHGVAVFAADIKGDLSGIATAGEANPKLLARTAGIGQDWTPDQFPVEYFSLGGVGRGVPIRATVTGFGPVLLSKVLGLNNTQESSLGLVFHYAEKSGLPLLDLTDLRAVLSYLTSDDGKAELKDLGGLSSATVGVILRELITFADQGADVFFGEPEIDTAEFLRTTAEGKGVISLLEVPGVQDKPALYSTFLMWLLADLFNDLPEVGDLDKPKLVFFFDEAHLLFADASKDFLAQITQTVRLIRSKGVGIFFVTQTPKDVPGDVLAQLGSRVQHQLRAFTPDDAKALRATVSTYPNSGYDLAEVLTTLGTGEAIVTVMNEKGAPSPVAWTRLRAPQGSMSPSPDAAIDAVVAASPLLPKYGTALDRDSAREILTRKLATAAAAADAAQQAADQAAAQAAAEKKSQAEYDRLMKKTSGTARSTKQQKTVLEEVLGSTATKSVLTAVIGGIFGTRKRR
>NZ_CP014145.1|WP_067232680.1|2584365_2585661_-|ATP-binding-protein
MRILLVGAGGVGDAIAKIAARRNFYELIVVSDFDEARAERTVAAVAARQGAEAAGRFLAEQIDASDPYAVESLVREHRITHVMNAVEPKFVPTIFAGALAAGANYLDMAMSLSEPHPTDPHNQTGVKLGDDQFAQAPDWQKQGQLALVGMGVEPGLSDVFARYASDHLFSEIDELGTRDGANLVVRDEEGNEIFAPSFSIWTTIEECLNPPVIWQKEEGWFTTPPFSEPEVFVFPEGIGPVECVNVEHEEVLLMPRWLDAKRVTFKYGLGAEFIGVLKTLHLLGLDSTVPLRVRGADAAGIRGPVEVAPRDVVAAALPDPASIGPQMTGKTCAGVWVTGTGTDGAPREVYLYHVSDNEWTMREYDAQCVVWQTAMNPVIALELLATGVWQGSGVLGPEAFDAAPFLELMARPLEQGGYGQSWGLEERTPAV
>NZ_CP014145.1|WP_067229243.1|2585729_2586410_-|phosphatase-PAP2-family-protein
MTAASGIRTHAPKHTPRRWPLVAGVTAIVLAVLLGAGITLLNGGAPLAIDAAWQSFMISTRSPFTEGLALFLNSFGGGFVAVLVVPLSIVGLLLFLRRPWAALFSAAAALLGTLGVQVLKHLFGRARPEDILVHSDYGSFPSGHTANAAVIAVTFAVLFPLVWVRVVGVAYVLLMAWSRTLLGAHWLSDTVGGALIGAGVVLVLWAFTARWLEAERRARPQAQTPD
>NZ_CP014145.1|WP_067232682.1|2586435_2587683_-|multidrug-effflux-MFS-transporter
MAAIRAAAPSHRGDALSARQRLVYVLVLGALTALGPFTIDLYLPAFPMLETELGVSASAVQLTLTGTMIGFGLGQLIVGPWSDKVGRKLPLILATLVHILACVGAAMASDIFVLGGFRLLQGFGAAAGGVVAMAMVRDLFGGKPLVKMLSRLALVNGLAPVLAPVIGSQLLLVTDWRGIFWVLAAYGAVVVLAVWLWIVETRPKADRALSAHSTVGARFKAVLSDRVFVGTAIVGGMVFTGLFAYLSASTFLFQQVHGFTPQEYGLLFGANSIGVIIGVQTSSRLIRTVIGPQWILAITTAMMAFLGIAIMVLDATGAGLWGTIIPLWFFITMCGFSFPCVQVIALNGHGQEAGTAASLLGATNFGLAGIISPLIGMLGVSTALPMGAVMTVTSLIAIAALWWIVRPRTVPALSA
>NZ_CP014145.1|WP_067232684.1|2587951_2589172_-|ROK-family-transcriptional-regulator
MRDSSRPARRGNNLDDVRRNNLAVVLEISHARGRVSRAELTRATGLNRSTVGALVAELVELGLVDETEPSATNQAGRPSPVIVPREDVVAIAVNPEVDAVTIGLVALNGRVLKRIRYDTARVPTPEEVVNIVAAVIAGMQSELNASYRTVGVGVAVPGLVRAADGVVILAPHLGWRDVPIAEMLSAALKLPVTAANDASAGVLAEGQYGAGRGARELVYLNGGASGIGGGIALDGELFGGTAGYAGEFGHTFVNSAGARCHCGASGCLETEVRRAPLLALLGLDSTRSEELEEALLAHLARPEGPDAAVVDLLKRQMSFLTIALRNVVNALNPELVLLGGFLGTLYAVDPERLTAEISSGALPGAGDSVRFGRSELGNELLMVGAAQLAFKPVLDDPASVAVPPAG
>NZ_CP014145.1|WP_067229245.1|2589287_2590289_-|sugar-phosphate-isomerase/epimerase
MTRPITLFTGQWADLPLEEVARLASEWGYDGLEIACWGDHLDPWRWDDAEYVAGKLALLAKYNLSVYAISNHLKGQAVCDDPIDQRHRDILPDVVWGDGEPEGVRQRAAEEMKNTARLAAALGVKTVVGFTGSSIWKYVAMFPPVSQELVDAGYTDFADRWNPILDVFDEVGVRFAHEVHPSEIAYDYWTTRRTLEAIGHRSAFCLNWDPSHFIWQQLNPVDFILEFADRIIHVDCKDVKLRLGNGRNGVLGSHLAWADLNRGWDFVSTGRGDVPWEASFRALNAIGYEGPISVEWEDAGMDRLLGAEEALEFVKRNAFDAPDAAFDAAFSSR
>NZ_CP014145.1|WP_067229248.1|2590340_2591504_-|Gfo/Idh/MocA-family-oxidoreductase
MIGAGFMGAAHSQGWRVAPRFFELSATPEMALLVGRDQEKTDSAAEKWGWAETSIDWREAIARDDIDIVDIVTPGDSHAEIAIAALEAGKHVLCEKPLANTPEEARAMADAAARAAARGVYAMVGFTYRRVPAATLARDLVAAGRIGQVRQVRAAYLQDWLADENGPLTWRLQKDRAGSGALGDIGAHAIDLAQYVTGTDIASVSGTLETIVAERPLPVADGAAHGLSAAASAERGVVTVDDLALFTARFGAGPHGSGFLGSFEASRFSTGRKNALRIEVSGSTGAISFDLENLNELQIFDATAPAEEQGFTRVLVTEPVHPYIAAWWPAGHMLGYEHGFSHQARDFVEAVAAGVQPTPSFADGLKVQQVLAAVEASAGADSAWRAV

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Crispr_ID: NZ_CP014145_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_9

2803848-2803924

Orphan

Consensus_repeat	Method
CTCCCGTTGGCTCGAGGGAACGCCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014145_9

>merge|NZ_CP014145|9|2803848-2803924|CRISPRCasFinder
CTCCCGTTGGCTCGAGGGAACGCCAGTCACCCGACCCGCGCTGCCCTGCCCCTCCCGTTGGCTCGAGGGAGCGCCAG

>NZ_CP014145|9|8|2803848-2803924|CRISPRCasFinder
CTCCCGTTGGCTCGAGGGAACGCCAG	TCACCCGACCCGCGCTGCCCTGCCC
CTCCCGTTGGCTCGAGGGAGCGCCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_067229723.1\|2797746_2799015_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP014145.1\|WP_067229716.1\|2793667_2794201_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP014145.1\|WP_082716976.1\|2805771_2808384_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|378795
NZ_CP014145.1\|WP_067229759.1\|2813820_2814585_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP014145.1\|WP_067229713.1\|2792197_2793616_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP014145.1\|WP_082716978.1\|2814581_2815559_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP014145.1\|WP_067229730.1\|2802084_2803737_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|238625
NZ_CP014145.1\|WP_067229742.1\|2809186_2809864_-\|nicotinamide-mononucleotide-transporter	unknown	unknown	gnl\|CDD\|377432
NZ_CP014145.1\|WP_082716974.1\|2794362_2796051_-\|malate-synthase-A	unknown	unknown	gnl\|CDD\|236432
NZ_CP014145.1\|WP_067229733.1\|2804014_2805490_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP014145.1\|WP_067229756.1\|2813056_2813815_-\|amino-acid-racemase	unknown	unknown	gnl\|CDD\|224707
NZ_CP014145.1\|WP_067229735.1\|2808459_2809173_+\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|260010
NZ_CP014145.1\|WP_067229746.1\|2811065_2813027_-\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|224250
NZ_CP014145.1\|WP_067229719.1\|2796124_2797474_-\|isocitrate-lyase	unknown	unknown	gnl\|CDD\|237893
NZ_CP014145.1\|WP_067229710.1\|2791169_2792141_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238042
NZ_CP014145.1\|WP_067229727.1\|2800198_2801104_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP014145.1\|WP_082716975.1\|2801100_2802027_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP014145.1\|WP_067229744.1\|2810578_2810965_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_082716977.1\|2809869_2810367_-\|DUF3054-domain-containing-protein	unknown	unknown	gnl\|CDD\|378616
NZ_CP014145.1\|WP_067229725.1\|2799011_2800199_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270308

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_067229723.1\|2797746_2799015_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	4.88808e-158
NZ_CP014145.1\|WP_067229716.1\|2793667_2794201_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.24056e-13
NZ_CP014145.1\|WP_082716976.1\|2805771_2808384_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|378795	pfam12029, DUF3516, Domain of unknown function (DUF3516). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is typically between 460 to 473 amino acids in length. This domain is found associated with pfam00270, pfam00271.	0
NZ_CP014145.1\|WP_067229759.1\|2813820_2814585_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	8.63494e-130
NZ_CP014145.1\|WP_067229713.1\|2792197_2793616_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.99861e-31
NZ_CP014145.1\|WP_082716978.1\|2814581_2815559_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.29983e-73
NZ_CP014145.1\|WP_067229730.1\|2802084_2803737_+\|amidohydrolase	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	3.06132e-149
NZ_CP014145.1\|WP_067229742.1\|2809186_2809864_-\|nicotinamide-mononucleotide-transporter	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	2.14696e-41
NZ_CP014145.1\|WP_082716974.1\|2794362_2796051_-\|malate-synthase-A	gnl\|CDD\|236432	PRK09255, PRK09255, malate synthase; Validated.	0
NZ_CP014145.1\|WP_067229733.1\|2804014_2805490_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.51443e-13
NZ_CP014145.1\|WP_067229735.1\|2808459_2809173_+\|ribonuclease-HI	gnl\|CDD\|260010	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD), residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability.	1.45718e-60
NZ_CP014145.1\|WP_067229746.1\|2811065_2813027_-\|thioredoxin-domain-containing-protein	gnl\|CDD\|224250	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones].	2.14077e-160
NZ_CP014145.1\|WP_067229719.1\|2796124_2797474_-\|isocitrate-lyase	gnl\|CDD\|237893	PRK15063, PRK15063, isocitrate lyase; Provisional.	0
NZ_CP014145.1\|WP_067229710.1\|2791169_2792141_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	2.66932e-06
NZ_CP014145.1\|WP_067229727.1\|2800198_2801104_+\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	4.15816e-77
NZ_CP014145.1\|WP_082716975.1\|2801100_2802027_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	5.3089e-58
NZ_CP014145.1\|WP_067229756.1\|2813056_2813815_-\|amino-acid-racemase	gnl\|CDD\|224707	COG1794, RacX, Aspartate racemase [Cell envelope biogenesis, outer membrane].	2.40833e-62
NZ_CP014145.1\|WP_082716977.1\|2809869_2810367_-\|DUF3054-domain-containing-protein	gnl\|CDD\|378616	pfam11255, DUF3054, Protein of unknown function (DUF3054). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	2.09764e-29
NZ_CP014145.1\|WP_067229725.1\|2799011_2800199_+\|extracellular-solute-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.02162e-95

>NZ_CP014145.1|WP_067229730.1|2802084_2803737_+|amidohydrolase
MTSTDADLVFSGGTVFTANTVRSTASAVAVRGGRIIAVGHEEVRELIGPHTELVNLAGRLLVPGFQDAHVHPVWGGLDLMRCNLADANTRTEYRSLIAEHARNNPDTEWVLGGGWSMSMFPGGTPLASDLDDIVGDRPAFLVNRDGHGAWVSSRALQLAGIDRNTPDPADGRIERLADGSPSGTLHEGAMALVNRLLPPVGTAGMREALLTGQRYLHSHGVTAWQDAIVGSYGDADDPAPSYLAAARSGELTGRVVGALWWDRSRGLEQIDELVARRAELHSGRFVATSVKVMQDGVAENFTASMLEPYGDGHGHPSDNSGISFVPPEILNEAVPLLDELGFQMHFHAIGDRAVRECLDAVAVAIERNGRGDNRHHIAHLQVVHPDDVPRFRELGVAANMQSLWATLEPQMVDLTLPFLGTARSAWQYPFGDLLRSGAVLAAGSDWSVSTPNPLAAIHTAVNRQAAPGYEEGDYEPFLPEQAIDLASSLTAYTAGSAWINHLEDVTGTIEVGKFADLAVLSRDPFAGPKEEIGLTTVEQTFIDGERVFGV
>NZ_CP014145.1|WP_082716975.1|2801100_2802027_+|ABC-transporter-permease
MTDLQAKTELHATRAVAVAAGERPPKRHRTRRSAADISLTVWSVLVFLFLFAPIIVIIAYSFNVGRLLVSWDHFGFESFGAIVTKPAIREAVLLSIRTGLIAAVLATALGTLAGIAMARRPGKWVFWFIGLLLLVSVTPEIVDAVALLPWLVFLGQDLGLGIFSDGVVRLVIGHSLFSTAIVAYIVRARLVGLDAQLEEASADLYAPPLRTFWRVTLPLALPAVLAGGLLSFTLSLDNTIVAAFVQVSGTTPWPVYVLSALRSGLRPEIAAVSTIMLVLTLFALAMVAVVLRRAGDSATQIARTMAGS
>NZ_CP014145.1|WP_067229727.1|2800198_2801104_+|ABC-transporter-permease
MASPSAPRRLPAPLLAFPAWAWLLFFFVAPVGMVLWFSFGYKPGIFGTHANDVLSFDRYIEALSPTFFATFVNTLWVGLAGTALCLVIGAPVAYWMAVKAPMNRRGLLLALVMVPFWTNFLVRTIGWQVILAPEGWLSTLLQAVGLQEGPLELLYTRTAVLIGVVYNYLPLMILPLFVAFDRVGGPLREASKDLGANRIRTFTQITVPLAQPGIVAGVLLVFIPLMGDYITATVLGGAKGNMIGQLVASQFQTAQNWALGSAMAVLLILVIALSVAAGAVLLWLITWPFRSRRRLVLGEAS
>NZ_CP014145.1|WP_067229725.1|2799011_2800199_+|extracellular-solute-binding-protein
MTAERSPLRILASSSAAPIIARELSRRRFLSFAAAAGGTLFLAACSSPGSNAGSSAQASGGPLEDKLSIYTWGDYDAPSVLEDFTSALGPAVTLDSFASNEEMISKLVAAKGTSGYDIIVPTGPFIPQMVENGLLTKLNPELIPNIKHMDPAFLGQDWDPNNEYTICKAWGTTGFVYDKTVITRELTSWDDFIDAAQNEASGKTSVLDDPAPLAGIYFWSNGIDWMTTDPAELDACENFLVNELAPHVTAFDSYPGGAAIPQASHVLMQVWNGDARIGIQESPDPERWQWVLGAPDTELWMDNWAIAAGAPHPEAAHAFINFVLTPENSLSELDYIGYHTGATDIQPAAEAAGIEMLDLVFFSPEQIATMHTGKVTEAQQRIVDIWNNTKAAAGA
>NZ_CP014145.1|WP_067229723.1|2797746_2799015_+|ABC-transporter-ATP-binding-protein
MEVPVTVLDDHAEASVPGVQSQSGAIELRGVSKFYGETPAVNDLSLDIAAGEFISLLGPSGCGKTTTLRMIAGFEHPDAGDILISGQSVLGQPPYRRNVNTVFQAYALFPHMSIAENVAYGLQQRRTPKAEIRERVAEALDMVQMRRFADRKPTQLSGGQQQRIALARALVNRPAVLLLDEPLGALDRQLREEMQLELKLLQSRLGITFVFVTHDQGEALSMSDRIAIMRDGHIEQLADADTIYSSPATAYVAGFVGQQNFLAGTIVGDVPGATTLQTPHGLLRAARTATGSPRLRVGDAAQAAVRPEFVQISARTGAADASQDGANRVAGTLIGVSHLGETMQYLVQLGGAHGAGTQSVLARRPTPEAPRLSVGDTVWCSWTPESVIIFAADDELPATAHVDPPTLSSASATPESPIEEHS
>NZ_CP014145.1|WP_067229719.1|2796124_2797474_-|isocitrate-lyase
MTAQNTPDSFRAGDQTQTAEQLELEWAADPRWDGIRRDYTAADVIALRGPVREERTLARRGAEKLWGAIQNNGTPEDPRWVAALGALTGNQAVQQVRAGLQAIYLSGWQVAADANLSGQTYPDQSLYPANSVPAVVRRINNALLRAGQIEFAEGGVSTGSTGGEPIDWMAPIVADAEAGFGGPLNAYELMASMIEAGAAGVHWEDQLASEKKCGHMGGKVLVPTGQHIRTLNAARLAADVAGVPSIVIARTDSLAASLITSDHDERDRPFITGERTAEGFYTVQNGIEPVIARGLAYAPYADLIWVESAEPDLELARRFAEAIHAEFPGKRLAYNCSPSFNWKRHLNDAQIASFQRDLAALGYAFQFITLAGFHSLNHSMFTLAHDYGTRHMSAYVELQEAEFASEASGYTATRHQREVGTGYFDRIATALNPDSATLALAGSTEAEQF
>NZ_CP014145.1|WP_082716974.1|2794362_2796051_-|malate-synthase-A
MNTTTLTEPRSSTAAAPTVPAHEPRIEVVGEMGPRYAEILTPEALDFLAALHDRFAGIRHDRLAARLRNPVDVANGRNPRFLEETAAIRQDPSWRVAGAGPGLEDRRVEITGPTDRKMAINALNSGAKVWLADLEDATSPTWQNVIEGQLTLLDALAGTLSHTSADGKEYTVTHDIAGPDTPTIVMRPRGWHLPEKHLRFHDRTGRRMSASGSLVDFGLYFFHNATRLIELGSGPYFYLPKLEGHLEARLWNDVFVFAQRSLDIQTGTIRATVLIETIQAAFEMEEILYELREHCAGLNAGRWDYIFSIIKAFRSRGRRFVLPDRRHITMTVPFMRAYTELLVSTCHRRGAYAIGGMSAFIPNRRDPEVTARALEQVAADKRREAADGFDGTWVAHPDLIPTARAEFDAAFQRPGAPDGAINQLHRTRSEVQVSAAQLLDIGWGGGQVTEVGVHDNIAIALRYIESWLRGTGAVAIDNLMEDAATAEISRSQVWQWVNENTVTAEGRRIDVAWARTVLRQVAGGLDRFDGDRFDDAVEVFTSVALEPEFPAFLTVGAYARFL
>NZ_CP014145.1|WP_067229716.1|2793667_2794201_-|GNAT-family-N-acetyltransferase
MTAVTVRIAGPEDAAALAEVAAATFRLACPPQTTELAIAEFLRDVLSEAHFAGYLADDTRTVLLAEQDGRAVGYTLLVFGEPADPAVSAAVGIRPTVELSKCYVRAETHGGGAGAALMAATLEAASERGAAGIWLGVNDQNARAIRFYEKSGFVKVGNKRFLLGGVYENDHTLERAL
>NZ_CP014145.1|WP_067229713.1|2792197_2793616_+|MFS-transporter
MSSSPDTASIPIAPFSDADAAGTSPEPKQRPSGIRAALADPVLRVLATSTLISTLGRGIFFALTVLFFTHFVGLSAGEIALILGISSGIGVATSYLGGHFADILSARRMLFAFLLLEGVTMAAYPFASDFGTALLLACIATGLNRAANSTRSAVIARAFDGEHRVSTRAILRTITNVGIAAGGAIAGLALLAGTIEAYRGLMIAAGAIYAVSALQMLRLPAHIVDAPPRERRARLAVDADTAAIAAHEVASARQAAAAAAASARSPFRDRRYLALTALAGVFGMQFALGEIGVPLWIVHNTAAPDVMVSAVLIVNTVIVIALQIPLSRGTDDIRKAGRSVLIAGAFMLIACGLYALSAGTDVAGGSVGVGVGMAITLLVGGALFHSFAEILSQAGTWGLSFELADPQRAGAYQGMFGMGFSLGTMLAPLVITATALELGMLGWAILAALFVASAIGIWLIARKSVESGQMAG
>NZ_CP014145.1|WP_067229710.1|2791169_2792141_-|winged-helix-turn-helix-transcriptional-regulator
MLRYQLTETDLGNVRFALSPLCELGLSLRALRDPARYPLQLPWLRHTEQARTGIDNEMLMALVDDRLWTPDFLNPRPLSPLTRLDDELDVLRRMPSRRFTEQLMMVHQGRMPAALDGPPRAAIARMVSALEQLWAAGFVDYWPRMRTILEADIVYRGRQLVQSGLSAMLNGLAPTASWDGRVLTVRLRAPLDRDVAGGSGLTLVPTMFTNRASAPIAPDEPPTMFYPARGQGAMWEAERVQNPAALAGIVGEVRAKLLIALGEPSSSTELGIRFGVSTSAVNQHLRVLREAGLLTSTRYGHSMLYLRSELGSALLAGSPAQVR
>NZ_CP014145.1|WP_067229733.1|2804014_2805490_+|helix-turn-helix-transcriptional-regulator
MITADRTTDEPTDADTDVDALTLGRRIRQRRAALGMTLEQLAAAIERAPSQVSTIENGKREPRLSMLRTIALALDTSVEELLRADAPSPRAALEIAVERAQRGPVFGALGLPAFRVGKGHSDQTLQTILTLHNEIDRLHRERAATPEEARRANAELRATMRARDNYFAELESAASTLLAAVGHTGGPVSQQMVADMASHLGYSLHYVGDLPHSTRSVTDKRNGRVYLPTAQSASRDSRSPILQALASHVLGHEEPRNYADFLRQRIETNYLTAATLLPEQATVRFLNEAKNLRRISMEELRDAFAVSYETAAHRFTNLATARLDIPVHFMKVHESGTIIKAYENDAVRFPSDALGAVEGTIVCRNWTARTVFDVEDRFSPWYQYTDTPSGTFWCTSRIEKAKEGEYSVSVGVPFAHVKWFRGRESTHRAVSRCPDESCCRRAPSALAERWAEQSWPAARTPTSLLAALPTGSYPGVDQTEVFQFLEAHAPR
>NZ_CP014145.1|WP_082716976.1|2805771_2808384_-|DEAD/DEAH-box-helicase
MTIETTPLLDRLPRAASGSFEVDALEPDAVFDVFEDWVRDRGLTLYPAQEEALLEIVSGSNLILSTPTGTGKSLVAVGAHFAALAAGKRSFYTAPIKALVSEKFFALVEIFGAANVGMMTGDSAVNPDAPIICCTAEILANQALRHGEDTEVDQVVMDEFHFYADPDRGWAWQVPLLMLPRVQFVLMSATLGDTRAIADDLSRRTGRETAEVTGVERPVPLHFYYETTPIHETVEELLTTGQSPIYVVHFSQAAALERAQSLSSAKIATREQREQIAELIAEFRFTTSFGKTLSRLLRAGIGVHHAGMLPKYRRLVETLAQRGMLRVICGTDTLGVGINVPIRTVLLTALTKYDGQRMRHLTAREFHQIAGRAGRAGYDTAGTVVAQAPEHESENIKAIEKAGDDVKKRRKIIRKKAPDGFVSWGEPSFRKLIDAEPEALSSRMQITSAMMINVIGRGGDVYQHLHDLVFDNHEPWRNQLVLARRALGIYRTLRQAGIVEQWEVSTLRQAQEGPGSTSGGSSTSGEREIQIRLTVDLPPNFALNQPLSPFALAAFELLDPDSPSFALDILSILEATLDDPRPVISQQQFVARGEAVAAMKSEGIEYDERMELLEQVTHPKPLGELLEAAFDTYKLAQPWIADFELSPKSVVRDMYERAMSFGEFIAFYKLARSEGVVLRYLSDAYRAARQTIPDEFKNEDLHDLIEWLGELVRQVDSSLIDEWNEMVHPDAAAHAAHEHEVVPPAPKRLTSNARAFRVLVRNELFRRVQLAARDDAVALGELDAEHGFGETEWGEALDAYYDEHDEILTGADARGAGLLMIEESATTWKVRQILDDPDGNHDWGITAEVDLAASDEAGEAVVRVTGLTRL
>NZ_CP014145.1|WP_067229735.1|2808459_2809173_+|ribonuclease-HI
MTIIASADGSALGNPGPAGWAWYVDDDCWAAGGWPHATNNQGELTAVLELFRATAHLDEDLHVLCDSQYVINSITKWMPGWKKKGWRKADGKPVMNLEILQELDAALAGRRYRFEWVKGHANHPMNEAADARARAVSEAFQNRSPIPTGPGWTRGGAPAAAAPVAAAPVTRAPAASAPATMQPDLFDFDDLTDEAEGAEEAGWQQISLTLSVDEHARLLGRARDHGVSPEEFLRSLI
>NZ_CP014145.1|WP_067229742.1|2809186_2809864_-|nicotinamide-mononucleotide-transporter
MNVLEWLFDAQLVIGDQTILWREVIGNGFGIASAIGGMRRKIWAWPVGIVGNALLFTVFLGAVFGTPNPVNLLGQASRQIMFIAVSVYGWVRWSQTRRRVDVATGMSVAVQPRWAGARIRVALVVAMVVGTAILTPIFTALGSFEPVWADAWIFVGSLLATWGMAKGWTEFWLIWVAVDIVGVPLLLSAGYYASAILFIFYGAFTLWGFFTWVKVQRGQTQALPA
>NZ_CP014145.1|WP_082716977.1|2809869_2810367_-|DUF3054-domain-containing-protein
MSEPRSARPQVFPDLLIDLILVFAFVLIGRRSHDETFDIAGTWQTAWPFFAALLLGWLVTRAWRSPDRIWPTGVLIWLVTVAGGMALRAISGQGTDIAFVIVATLTLGAFLIGWRLLGVWIERILQKRRDKKLAAEEAAVVNAAAQAKAKAELNRPDPNRRTPGL
>NZ_CP014145.1|WP_067229744.1|2810578_2810965_+|hypothetical-protein
MSERGYKIEHEVAAEPESPALHALRQQALSEIAQDIELHSALGEEPLLFLPALPTLDEQVVLDQYRERSTLPELAAARARAYHPAARPGAAEEYEFGVLRAIALEYPALSAAAWRLIDRAPRLLGRAG
>NZ_CP014145.1|WP_067229746.1|2811065_2813027_-|thioredoxin-domain-containing-protein
MANRLAGAISPYLRSHADNPVDWWPWGADAFAEAARRDVPVLVSIGYSSCHWCHVMARESFSDPATAAQLNAQFVAIKVDREEHPDVDASYMAAAGAFTRNLGWPLTVFATPGGHPFFAGSYFPPVAAGGLPGFRDVLNAVSDAWTSRRDAVDATAEAVAEALAAAGPSPTRWLPTEADLARAVAALAALEDPVYGGFGAPPHFAEPKFPVAPALGFLLERADGAELGARTLKLMGASPLRDPVEGGFFRYATRRDWGDPHYERMLYDNALLLDAAVRAAQNDQGAHWAQTLSAALAGFLLDVLRLPGGAFASAQDSESMLDGRRSEGGYYALDEESRAEVVPPALDEKVLSGWNGLAIAALARAGAALQRPEWVDGARDAAEALIRLHLRRPEDSDPRILLRASRGDRVSAAPATLEDYGMLAGGLLALAGASGEARYAVLARELVDACLAEAGPSGLPFAVPGGAEDVLAAQGMALKLDASEGAYPSGLSALASAAFDLSLLSGDRRYREAAEAAVSLVGPHAPERPLGYGGLLTVAERLRRPVVQLVNVVTVAGAAPAVTADAERLLVEARRGAASVSLSITLSEPQAEAFAAAGFELFAGRRAQGGRATSYLCEQFVCRLPVTDASELAALLAVGPAVGDDRDGGRSGR
>NZ_CP014145.1|WP_067229756.1|2813056_2813815_-|amino-acid-racemase
MANRIRDVDQAVDIPAVNEPGRIVGILGGMGPAATADFYAKLVRATPARTDQEHLRTLIWSDPTIPDRTGALLHGGVDPTPLLLAGALRLRAGGASVIAVPCNTAHAFIPRIASAVGLPFVHMIEETVLGIRARHPNALHVGLLSTTGTQASLLYDEALRRHGLIPVVPTADAQEFRVMAGIARVKAGVIDAQTRALVTEAAGELVQAGAELVIAGCTELPIALEGVELTVPVVDPTLALAEAVVRVVRHGV
>NZ_CP014145.1|WP_067229759.1|2813820_2814585_-|amino-acid-ABC-transporter-ATP-binding-protein
MTEPLVRATGVTKSFGHNKVLNGVDFEVRAGEVSCIIGPSGSGKSTFLRCINALETADAGGLEVAGSQVGYSLEGGSYRPWRDRDFAKFRAGIGMVFQRFNLYAHLDAAENVATSLVNVAKMDKVAARRRALEELDRVGLAAHAAKRPHQLSGGQQQRVAIARALAMDPTLMLFDEPTSALDPELVEEVLESMKALALGGMTMVVVTHEIGFAREVGDTLSFFDAGTIIESGAPDRVLSDASSPRTRAFLDKVL
>NZ_CP014145.1|WP_082716978.1|2814581_2815559_-|amino-acid-ABC-transporter-permease
MTASHRRTAPILGADGSETPITPRWHVGRWIVGTLAVLVVVWLATAIIFNENIRWNRVFDYLFSPRILDGVVVTIWMSILATVIGLSLGVVLAVMKLATNPVLQWIAAGYIWFFRGTPVLVQLIFWYNLAFLFPYLTLQIPFTQIGVQWDTNQVMTSFMAALLGLGLNLAAYFAETVRAGIQAVDRGQTEAALAGGMTHMQTMRIIVLPQALRIIIPPTGNEFISMLKTTSLVVVVAGSDLMTNASQIYKQNNLIIELLIVASLWYMLLTAIATFFQSKLERRFGSDAVRLVRGPGFVQKFLRNGQQAQTSTEAIATISEKVTTR

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Crispr_ID: NZ_CP014145_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_10

3609160-3609244

Orphan

Consensus_repeat	Method
CCCCCCCACGTTGGCTCGAGGGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014145_10

>merge|NZ_CP014145|10|3609160-3609244|CRISPRCasFinder
CCCCCCCACGTTGGCTCGAGGGAGCGCCAGCGACCGAAGCCAATCCGCGAGCCGAGGTGCCCCCCCCACGTTGGCTCGAGGGAGC

>NZ_CP014145|10|9|3609160-3609244|CRISPRCasFinder
CCCCCCCACGTTGGCTCGAGGGAGC	GCCAGCGACCGAAGCCAATCCGCGAGCCGAGGTGC
CCCCCCCACGTTGGCTCGAGGGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_129586761.1\|3619209_3619584_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367882
NZ_CP014145.1\|WP_067231592.1\|3604779_3605487_+\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP014145.1\|WP_067231618.1\|3621325_3622051_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_082717219.1\|3600284_3601112_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|225312
NZ_CP014145.1\|WP_129586760.1\|3609662_3610481_-\|heme-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|237422
NZ_CP014145.1\|WP_067231582.1\|3599652_3600282_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP014145.1\|WP_067231595.1\|3605673_3607605_+\|cellulase-family-glycosylhydrolase	unknown	unknown	gnl\|CDD\|365907
NZ_CP014145.1\|WP_067231589.1\|3601320_3602364_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP014145.1\|WP_067231610.1\|3612986_3618203_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367875
NZ_CP014145.1\|WP_067231603.1\|3609282_3609642_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380033
NZ_CP014145.1\|WP_067231599.1\|3607677_3608982_-\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|234856
NZ_CP014145.1\|WP_082717099.1\|3623455_3623680_-\|DUF3073-domain-containing-protein	unknown	unknown	gnl\|CDD\|378620
NZ_CP014145.1\|WP_067232997.1\|3603682_3604633_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
NZ_CP014145.1\|WP_067231607.1\|3611662_3612823_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226928
NZ_CP014145.1\|WP_067231572.1\|3596143_3597472_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|226363
NZ_CP014145.1\|WP_067231625.1\|3623826_3624897_+\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224983
NZ_CP014145.1\|WP_067231622.1\|3622173_3623277_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_CP014145.1\|WP_067231575.1\|3597468_3598551_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238624
NZ_CP014145.1\|WP_067231614.1\|3619595_3621155_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236113
NZ_CP014145.1\|WP_067231578.1\|3598626_3599481_-\|tryptophan-2,3-dioxygenase	unknown	unknown	gnl\|CDD\|188272

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_129586761.1\|3619209_3619584_+\|hypothetical-protein	gnl\|CDD\|367882	pfam04235, DUF418, Protein of unknown function (DUF418). Probable integral membrane protein.	0.0042606
NZ_CP014145.1\|WP_067231592.1\|3604779_3605487_+\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.53285e-50
NZ_CP014145.1\|WP_082717219.1\|3600284_3601112_-\|VOC-family-protein	gnl\|CDD\|225312	COG2514, COG2514, Predicted ring-cleavage extradiol dioxygenase [General function prediction only].	3.31686e-83
NZ_CP014145.1\|WP_129586760.1\|3609662_3610481_-\|heme-ABC-transporter-ATP-binding-protein	gnl\|CDD\|237422	PRK13548, hmuV, hemin importer ATP-binding subunit; Provisional.	2.12864e-117
NZ_CP014145.1\|WP_067231582.1\|3599652_3600282_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.49671e-09
NZ_CP014145.1\|WP_067231595.1\|3605673_3607605_+\|cellulase-family-glycosylhydrolase	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	2.84018e-19
NZ_CP014145.1\|WP_067231589.1\|3601320_3602364_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.503e-81
NZ_CP014145.1\|WP_067231610.1\|3612986_3618203_+\|hypothetical-protein	gnl\|CDD\|367875	pfam04213, HtaA, Htaa. This domain is found in HtaA, a secreted protein implicated in iron acquisition and transport.	1.94631e-38
NZ_CP014145.1\|WP_067231603.1\|3609282_3609642_+\|hypothetical-protein	gnl\|CDD\|380033	pfam17844, SCP_3, Bacterial SCP ortholog. This domain is found in MSMEG_5817 gene product from M. smegmatis. It has been shown to be vital for mycobacterial survival within host macrophages. Crystal structure revealed a Rossmann-like fold alpha/beta two-layer sandwich forming a highly hydrophobic interface cavity and with high structural homology to the SCP family. Hence, it has been suggested that this domain may be involved in the interaction of apolar ligands through its hydrophobic cavity. Alanine-scanning mutagenesis of the hydrophobic cavity of MSMEG_5817 protein demonstrated that the conserved Val82 residue plays an important role in ligand binding.	1.29061e-49
NZ_CP014145.1\|WP_067231599.1\|3607677_3608982_-\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_CP014145.1\|WP_082717099.1\|3623455_3623680_-\|DUF3073-domain-containing-protein	gnl\|CDD\|378620	pfam11273, DUF3073, Protein of unknown function (DUF3073). This family of proteins with unknown function appears to be restricted to Actinobacteria.	4.57745e-17
NZ_CP014145.1\|WP_067232997.1\|3603682_3604633_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	4.59386e-157
NZ_CP014145.1\|WP_067231607.1\|3611662_3612823_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|226928	COG4558, ChuT, ABC-type hemin transport system, periplasmic component [Inorganic ion transport and metabolism].	6.23213e-59
NZ_CP014145.1\|WP_067231572.1\|3596143_3597472_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|226363	COG3844, COG3844, Kynureninase [Amino acid transport and metabolism].	7.40032e-103
NZ_CP014145.1\|WP_067231625.1\|3623826_3624897_+\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	8.31221e-33
NZ_CP014145.1\|WP_067231622.1\|3622173_3623277_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	6.02211e-155
NZ_CP014145.1\|WP_067231575.1\|3597468_3598551_-\|hypothetical-protein	gnl\|CDD\|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	1.51991e-23
NZ_CP014145.1\|WP_067231614.1\|3619595_3621155_+\|amidophosphoribosyltransferase	gnl\|CDD\|236113	PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional.	0
NZ_CP014145.1\|WP_067231578.1\|3598626_3599481_-\|tryptophan-2,3-dioxygenase	gnl\|CDD\|188272	TIGR03036, trp_2_3_diox, tryptophan 2,3-dioxygenase. Members of this family are tryptophan 2,3-dioxygenase, as confirmed by several experimental characterizations, and by conserved operon structure for many of the other members. This enzyme represents the first of a two-step degradation to L-kynurenine, and a three-step pathway (via kynurenine) to anthranilate plus alanine. [Energy metabolism, Amino acids and amines].	9.14324e-146

>NZ_CP014145.1|WP_067231599.1|3607677_3608982_-|phosphoribosylamine--glycine-ligase
MRILVLGSGAREHAIITALLAEERHGGDAHEIIAAPGNAGIAADASAEGAGSVSTVALDANDPVAVADYAMDNNVQLVVVGPEAPLVAGVADALRTRGIPVFGPAQAAAQLEGSKTFAKRIMDEAGVPTGRAVRAGTLAEAKAAIDEFGAPYVIKADGLAAGKGVLVTESRDAAVNHAAFWLEHGSVLVEEFLDGQEVSLFFLSDGHNVLPLSPAQDYKRLADGDSGPNTGGMGAYSPLPWLDAEFGSEAEFVAEVQRTIALPTVRQLASEQTPFIGLLYCGLILTARGIRVIEFNARFGDPETQVVLPRLVTPLSGLLFDAATGALGERANPEFATDVCVTVVLASENYPETPVTGREIRGLDAASAVPGVHIAHAATASRDGNLVSTGGRVLNVVATAPDFAAARARAYEALALVELEGAQFRTDIAARVAG
>NZ_CP014145.1|WP_067231595.1|3605673_3607605_+|cellulase-family-glycosylhydrolase
MQRRTVRLIVAIAMAALAGSIATPVYAAETAPPSIPVLTGAELSASWAGPLSTRGRYVVDANGNRFKLKSANWDGAQGHWNGTAPKSDPANHNSGISYDIPMGLDRVPIATLMADFHSVGINSIRLPFSNEMLTMTAPVPDVAVLANPQLKGKTPLQIFDVVVETLTADGFAVILNNHSTTSRWCCGADDGNSKPHSGQTLDKFVSDWAFLATRYASNPRVVGMDLRNEVRRDITDDPNWGMGDANDLYKAYQLAAVAIQKVNPHTLIVMEGINWQGIPLDGFFHERPNLRPVATTSNTILYPDKLVYSSHVYGFTGPKHTGATGLGETHDLRYRDMTAAELSAAVIAESLFVTTSGQHYTAPVWLSEFGTTGAGQDNPKEVAWWNNFTDVLVANDTDFAAWPLVSQATEDGVFSDKFALLGYSASGTKFSIANDWRYPAWVKLITAAGKSGQVAVEPRWNMLGSGAISPDNNASLRLQGTDWDSAKWKGNCPDSERLIGLSRSSNRALCTNNAQPATSSTYAVVSNESTVTHDWAGGYSKLQCPAGQIATGFSVNPGVTNKWAMSKLLCSQSTTTLPTSQGRTLWFDQGDNRPAGVGSIGSDWAPGKFKGQCNNTEYIAGVAFTYRWNNGGVPSALLCKPLA
>NZ_CP014145.1|WP_067231592.1|3604779_3605487_+|MgtC/SapB-family-protein
MTIDWFTGTLATELVLLGMAFVLSAVIGLERLWHRKSTGLRTHTLVGVGSALFTLVSAYGFSQVTDPNVVVDPSRIAAQVVSGIGFLGAGVIFVRQNVVNGLTTAASIWMTAAVGMACGAGMPVLATAATVMHLFTTTLLSRFGRRLRPVPEDTVVVQYKGGREVLSEVLAAATSRGLRTSLTSTKTVETPSGAERIEAVLTFDSAGRRAQQQLLQDLSGIRGVVSVALADEDSD
>NZ_CP014145.1|WP_067232997.1|3603682_3604633_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MTNETQPSASSAVELPGWTHVYSGKVRDLYVPTSSMTDDDSWTGDPLAASPEVLVVASDRVSAFDHVLEPGIPGKGELLTTLSLWWFDQLQVPNHLIADHGLDGASRIPAAVAGRAMLVRTLDMFPVECVVRGYLTGSGWKEYQASQTVCGIPLPAGLTNGDRLPEPIYTPAWKAPMGEHDENISYERTVELVGADVATELRALSLQIFADASAIAEAHGLILADTKFEFGADRETGVIRLGDEVLTSDSSRYWDGETYATAATPEARMASFDKQIVRDWLATNWDQQGTPPELPAEIVEQTAARYRELLGRLTAL
>NZ_CP014145.1|WP_067231589.1|3601320_3602364_-|LacI-family-transcriptional-regulator
MNSHHGQQARRPATSEDVAAHAGVSQSSVSLVFSGKDAGRVSAVTAARIRQSALELGYQPNLNAAALKTGRANVLALAVPTIAQPYFARVLLGAERAARRNGHAVVLFNSDSGLPWTTRLSAMIRGSQLDGAIIYAPTEDEALELASQGLPLVFAETHIPDAAYVGIDVELGMELAADHLVELGHRQIGHLAVDSRRATYRRRAEALHARLRSTGRVISDSASEAASLDWDEAEAAAHRLLEAAPEMTAAVCDDDLLAAALLKAAAVRGIAVPERLSVIGFGNIDVARMLSPELSTVALPAEELGERAVEQLLATIAGAAAPADAASPADLAPRLVARGSTAAVRAG
>NZ_CP014145.1|WP_082717219.1|3600284_3601112_-|VOC-family-protein
MGAVTLRVGNLDAMIAYYRDAVTLQLLSHEGPIAVLGRGTTPIVILQHAPELVNPEPRAAGLFHTAILFETQAALAAAVYSVASRHPNTFTGSADHLVSEAFYFNDPEGNGIELYWDRTRTEWSWTHGTIEMATLALDPNAYLQSHLTEAGVADPVIGGAVVGHVHLSVGDVAAARDFYVDSLGFETTAEMGGSALFVSAGGYHHHMAMNTWNSRGAGRRQQALGLGQVDIIVPDADDLGALQERMTHHKIGVRDDGQTLSFDDPWANLIRVRTA
>NZ_CP014145.1|WP_067231582.1|3599652_3600282_+|TetR/AcrR-family-transcriptional-regulator
MSPSDGAEHARRSGGDPPRRRKDAQRNYERLLQQAREVVAEQGSEASLEEIARRAELGIATLYRHFPNRTELMRALYEQSVAELGGTASEAVNAPSAWQGLVVYVERMTQWLVEDPGLVSIIEYLGAADPEYIPEPSRERPLVELITRAQAAGELRPDVERSDVSRLITLLGGQSLLRGEDPPLDWRRPLGIMLDGLRAENVRSALPPR
>NZ_CP014145.1|WP_067231578.1|3598626_3599481_-|tryptophan-2,3-dioxygenase
MSVEKNTRDFDPGIVTDFRERMSYGGYLQLDTLLSAQLPVSVPEHHDELLFIVQHQTTELWLKLVLHELASARDLLRADQLAPALKRIARVKHIQRTLTEQWSVLATLTPTEYAEFRGFLGNSSGFQSWQYRAVEFVLGNKNRRMLNVFQADAAASALLSELLEAPSIYDEFLRYLHRAGHAVPDSVLERDVTEAWVLDPELVPVFTNIYENASENWAAYEACEEFVDLEENFQLWRFRHLKTVQRTIGMKTGTGGSTGAAFLQKALELTFFPELYAVRTEIGR
>NZ_CP014145.1|WP_067231575.1|3597468_3598551_-|hypothetical-protein
MTPGTRHLGVQQWWSGGWRGAAVFALQGGLLHPLPDFDRATTPVDLELPGTLFPQLTDQHVHLGLGRPELLLPGGITHVVDLGWRPAEATGWLAASAQPGSTLPAVRIAGAFLSCAGGYPSSSGWAPAGSTVELATDAAETGQAADAVAAQLAAGASVIKLMFNSAAGPVPGDGVAAAVVAAARAHGVPVVAHTEGAGQAARALDAGVSALAHTPFTEALDDALLRRMAVAGLSWISTLDIHGWGAATPERAIAIDNVRRFTAVGGRVLYGTDLGNGPLPNGVNERELLALAEAGLTPDALVASIAGAEHAPLSAAQPAIGPRVAWVPGTPPATGYSADTARWLAGARGTTTAHLEETLP
>NZ_CP014145.1|WP_067231572.1|3596143_3597472_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MTTIPKPGPGLRQAASVTPPAAAHADPSRADDLLAFARRADAADPLAAYRARFAGAESDLVYFDGNSLGRPPVSAIERIQTFLREEWAGRLIRGWDEKWLRLPYEIGDRIGRSVIGAAAGQTVIGDSTTVLLYKLARAAVDAQVARDPQRTEIVVDTDNFPTDRYVLDGIAKERGLTLRWIEVDTSAGVTAEQLASVVGPQTALVVVSHVAYRSAHLADAAELTRITHDAGALILWDLCHSAGATTVEADAWGFDLAVGCTYKYLNGGPGSPAFAYVRAGLQGELAQPIQGWWGTSDMFAMGPEYVPAPGMQRFVSGTASIVGMLAMQDTLEMIEEAGMAAIRAKSEALTAYAIRLHEAWLAPLGVTLATPAEPGQRGGHVTLHHPAMREVNAALWTQDVIPDYRDPGGLRIGLAPLSTSFDEVYRGLAAARDTLRTLLATT
>NZ_CP014145.1|WP_067231603.1|3609282_3609642_+|hypothetical-protein
MARARIDDAQGRAAVAAWREDRAGASRDIRALAVRYTLQLLAELAPGNTLEVRVPPFGAVQCIEGPRHTRGTPPNVIETDAATWLALAIGERPWAEALGSGAVHASGQRADLAEQLPLL
>NZ_CP014145.1|WP_129586760.1|3609662_3610481_-|heme-ABC-transporter-ATP-binding-protein
MSDTALSSARADAAASADARLTARALSVTVDGARLLDGVDFAARPGELHALLGPNGAGKSTLLGALAGDVKPSAGSVSLDGRDLTGWKLRELARERAVLLQQHDVYFPFTVRQVIEMGRAPWRGTAAEDDDERLIEEAMQLTDVSALAERTVPSLSGGERARAALARVLAQGASLLMLDEPTAALDLKHQEDVLRLVRERATAGATVIVVVHDLSLAAAYADRVTLLQHGRVVATGTPGDVLTAERIGEVYGQPVEVFEHPRTGAPLIVPLR
>NZ_CP014145.1|WP_067231607.1|3611662_3612823_-|ABC-transporter-substrate-binding-protein
MSFLLSPRRGRSPLRAGVPALIAATLTLLAVTGCAGPAAAPGTAAEVKRECVASETPLTELAILDDPRAWVGPSTACLADADITAIDSPDEPQLPVTVVDDKGTEVTVTDASRILAVDVSGSLAATVFGLGLGDRVIGRDSSTGFAAAAGLPLVTTGGHQLSAEPILELAPTVILTDTTLGPPAVIAQLRDAGIPIVITTSKRNIDTIGTVIEQVAAALGVADAGTRLTEKVHAELAAVQADIESIAPADTADRPRMLFLYLRGSAGVYYLFGEESGADALITSIGGRDVAGEIGWQGMRPVTAEALVEAAPDLVLVMSKGLESVNGVDGLLDSIPALASTPAGQNRRFVDMSDSEILSFGPRTPQVLDALARAVYAPEQSGPIGE
>NZ_CP014145.1|WP_067231610.1|3612986_3618203_+|hypothetical-protein
MKTLQQHRARPQRWLATLTIALLALGAPLATAAPAFAREALPALEQQVPAEQAPAEQISAEQTPAEQPAAADSPEAVEDSAPEAAPAPAPEVAPAPEAAAAPQVAVQGADAPVAAPTVTVSKTEGLNAAGETVTVTGTGFVAGDATSGARPPLAGKFAGSYVVFGRFADAWKPSENAASASRAGSGDTKWAVPAADMATIGGDAAGAIELNADGSFTATLNVTEEFAKNPGTGNYGIYTYSGSGAKAAQFETFTPITFAPKVVAPTVTVSKTEGLNAAGETVTVTGTGFVAGDATSGARPPLAGKFAGSYVVFGRFADAWKPSENAASASRAGSGDTKWAVPAADMGTIGGDAAGAIELNADGSFTATLNVTEEFAKNPGTGNYGIYTYSGSGAKAAQFETFTPISFAPKVVAPTVTVSKTEGLNAAGETVTVTGTGFVAGDATSGARPPLAGKFAGSYVVFGRFADAWKPSENAASASRAGSGDTKWAVPAADMAAIGGDAAGAIELNADGSFTATLNVTEEFAKNPGTGNYGIYTYSGSGAKAAQFETFTPITFAPKVVAPTVTVSKTTGLNAAGETVTVTGTGFLPTAETTGTRPPLAGKFTGAYVVFGRFADVWAPSANAPSASRAGSGDVKWAVHADDMATIGGAPAGAIEVKADGTFTATLNVTEEFAKNPGTGNYGIYTYGGGGAKYAPFESYTPITFAPKVATPTVTSTVAAASATDGLSVRLVGSGFGTTTAAYAAIIEKGTEASVDPASGFIAMEYWMPPAIVAGGFDKSLVAPTAALDRNKQYEVIIWKQHSLPNAGTIYARADITPTTGQWDTLFPAPQPDAEATTTTLSVDKTAVVEGSTVTATAVIAPVAASGTVNFVNGSTVVAKDVAVTGGTATASFKLAKTGSASLTAVFTPAKGALFLGSTSAAVAVAVTAKPVTPPESQTGELDWGVYSAFRDYITGPVAGGEITLSDGATAAGSGFQFTQAGGTVDLQAGKGSANYNGALRFTGHHGALDVTMSAPTLRLDSATKATLLVIVNGTRVEFATVNLAAAGTSTDKGKTLITDAPVTLSAAGATAFQGFYPAGTVIDPITVAFSTGATEPVETIGTRTALSVDKDSVLVGGSVKLSATVTPGTAQGSVIFSANGTQLGSAVRVIDGAASADAALRTVGSIALTARFVPDAGFGASSSAARTVTVTSSVLPPVKPPIVTPPTTPVVPPVVAPTTQGGSLSWGVGSVFREYIVGHIAKGSISVSGGATSASGVFQFGQSGGSFNQGSGTGTADYAGSVRFTGHGGILDLTFSNPTLSVSSASSASLTLTVNGSRVDFATVDLGAASRSSLNGATVFSGAPVTLTSAGAGAFQGYYPAGQALDPMTVTIGAAAAAPGGNTGTVATASANTPAAGSVPATPPATEGITLTPEVLAGIVAGGQISFEADGFQPNETGIRIVIYSTPTVLAENLTADANGVVRWTGTLPATLTGEHTLTVQGSISKGVVITIPERAVAGSCPIEGATLDWGFKQSFLAYISSGIANGGWELSGGSTEADGLFHWANGTGSIDSKNGSGLVSYLGSIRFTGHDGALDTTIANPRIELVSETEGYLVLDVTGTTQEGEPIAGQGLRFGQLKLDAGSLTVTDAGITGTAIEAVLTEAGAAAFGTYPAGDALDPISFTLPTNADCGVVAAEAVTTEATGPGKQEAASISADAAQGVNWVVWILAAFLAAALAVIVVLLTKRRRAGADTSAE
>NZ_CP014145.1|WP_129586761.1|3619209_3619584_+|hypothetical-protein
MSETAPEPAESGPVPQPAEQPNAEPVETVVAHETLNVRRAPKITRFLAIGAGVGILAALLLTVLFPVNEDYDRGQVFGFLLLFLGAIGLGLGALTALILDRRAARRSVTVVADRIDAHSGDNSQ
>NZ_CP014145.1|WP_067231614.1|3619595_3621155_+|amidophosphoribosyltransferase
MASGDGLLNHDLLPGEKGPQDACGVFGVWAPGEEVAKLSYFGLYALQHRGQESAGIATSDGNKILIYKDMGLVSQVFNETALNTLTGHIAVGHTRYSTTGSSSWQNAQPTLGRTSTGTVALGHNGNLTNTAELLDLVHERYPETDGELRRGNTTDTAVVTALLTGDTNHTLEQTALEVLPRLRGAYCLVFMDEHTLYAARDPQGVRPLVLGRLDRGWVVASETAALDIVGAAFVREVEPGELITIDEDGLRTQRFAESKPAGCVFEYVYLARPDTTIAGRGVHEARVEMGRRLAAEHPVEADLVIPTPESGTPAAIGYAQASGIPFGQGLVKNSYVGRTFIQPSQTIRQRGIKLKLNPLKEVIKGKRLIVVDDSIVRGNTQRALVSMLREAGAAEVHVRISSPPITWPCFYGIDFATKAELVASGLGVDEVRQSIGADSLGYLSEDGMIEATEQPRERLCTACFTGKYPIPLPESQHLGKNLLERPGDSNGCDPGPDSELEGLLDANAPLVIGDPGRQE
>NZ_CP014145.1|WP_067231618.1|3621325_3622051_-|hypothetical-protein
MWGSGAAWWSVREEASRQVLLALYLRDRIGIEAPVELPRLQGVIGVADGTALRELRHSPHHPLALHGPHHAAEAPEAQPAAPLPFELMAEPARSRLETQWLLWWATTVEPERFPSPVPLELAPAFGDLVALPVRGAELLLEAITPYAEAAVAWSDAAARRFADYQHEPRGSLKLAYAGLIAENERMHGRRARVFELTVQLLPLAASGAWWIGRNTVAMTDTLRRDPIGFSDALRPIIAELA
>NZ_CP014145.1|WP_067231622.1|3622173_3623277_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTENSYAAAGVDTAAGDLAVELMKAAVSKTHGPNVLGGVGGFAGLFDVSFLTAYKRPLLATSTDGVGTKVAIAQALDKHDTIGQDLVGMVVDDIIVVGAKPIFMTDYIACGKVVPSRIASIVEGIAKACSATGTALVGGETAEHPGLLGPDDYDVAGAAVGVVEGDAVLGADRVQHGDVVIAMASSGIHSNGFSLVRHILAQNKIGYTDHSNEFGGVVGEVLLEPTRLYTGPLVNVLEDPALAGSVHSLSHVTGGGIAANLARVLPVGSWVEVDRASWSPNSVFRVLSDLAGTTLESAEGTWNLGIGMFAVVAADAASSVVAKLEAEGIHSWVAGRVSTAPRDFTGFEQGAKGVDGGAVRLVGSYAA
>NZ_CP014145.1|WP_082717099.1|3623455_3623680_-|DUF3073-domain-containing-protein
MGRGRQKAKHTKVARELKYFSPDTNYGALERELTHSGDVRPGGDRLDEDLAKWPEYEATQYEDTYATEDEQKRA
>NZ_CP014145.1|WP_067231625.1|3623826_3624897_+|NAD(P)-binding-domain-containing-protein
MRSDRDVPVVVIGAGQAGLAVAYYLHRFELTAGQDFVVLDRGPDAGGAWQHRWQSLRLGSAHRVHDLPGMAELGLSFETAERDVPARAVVSNYYRRYEEHFQLAVERPVRVRSVVNSGADLQVHTDSGSIGTRFVVNATGTWGAPFIPHYPGAMAFAGRHLHTADYVSAEDYRDKNVLVVGGGTSAIGFMLELEGVAANLNWVSRRPIDWIDTELLDVEAAAAAVAAQDRAARAGHPLPSIVSGTGVPKTRRIAAGINRGLLVAKPMFSVLEPGGARWSDGSFVPADAIIWATGFRPELRHLAPLKLRESAGGVTVASGASWTDPRIFLAGYGPQASTIGASRAGRTIARQIMALL

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Crispr_ID: NZ_CP014145_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014145_11

3639157-3639235

Orphan

Consensus_repeat	Method
GCTGGCTGAGCCGGCCCCGCTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014145_11

>merge|NZ_CP014145|11|3639157-3639235|CRISPRCasFinder
GCTGGCTGAGCCGGCCCCGCTGGGTGAGCCGGCCCGCGCTGGGTGCGCTTGCCCCCGCTGGCTGAGCCGGCCCCCGCTG

>NZ_CP014145|11|10|3639157-3639235|CRISPRCasFinder
GCTGGCTGAGCCGGCCCCGCTGG	GTGAGCCGGCCCGCGCTGGGTGCGCTTGCCCCC
GCTGGCTGAGCCGGCCCCCGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014145.1\|WP_067231670.1\|3641630_3642626_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|187575
NZ_CP014145.1\|WP_067231651.1\|3632552_3633290_+\|DUF4097-family-beta-strand-repeat-protein	unknown	unknown	gnl\|CDD\|226123
NZ_CP014145.1\|WP_067231640.1\|3629394_3630030_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP014145.1\|WP_129586828.1\|3625010_3627098_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP014145.1\|WP_067231673.1\|3643834_3644848_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP014145.1\|WP_082717100.1\|3634448_3635936_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP014145.1\|WP_067231638.1\|3629112_3629349_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014145.1\|WP_067231632.1\|3627240_3628491_-\|family-1-glycosylhydrolase	unknown	unknown	gnl\|CDD\|274539
NZ_CP014145.1\|WP_129586762.1\|3644892_3647376_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366008
NZ_CP014145.1\|WP_067231665.1\|3640090_3641044_+\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|133428
NZ_CP014145.1\|WP_067231667.1\|3641052_3641586_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240032
NZ_CP014145.1\|WP_067231647.1\|3631110_3631869_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_CP014145.1\|WP_067231662.1\|3639371_3640040_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP014145.1\|WP_067231691.1\|3650566_3651535_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP014145.1\|WP_067231655.1\|3633724_3634405_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225239
NZ_CP014145.1\|WP_067231643.1\|3630026_3630893_-\|DUF4097-family-beta-strand-repeat-protein	unknown	unknown	gnl\|CDD\|226123
NZ_CP014145.1\|WP_067231688.1\|3649188_3650517_+\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
NZ_CP014145.1\|WP_067231635.1\|3628561_3629032_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP014145.1\|WP_067231685.1\|3647582_3649124_+\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377122
NZ_CP014145.1\|WP_082717220.1\|3642897_3643758_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|212516

Protein	Function_ID	Function_description	E-value
NZ_CP014145.1\|WP_067231670.1\|3641630_3642626_+\|oxidoreductase	gnl\|CDD\|187575	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1. Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.22598e-44
NZ_CP014145.1\|WP_067231651.1\|3632552_3633290_+\|DUF4097-family-beta-strand-repeat-protein	gnl\|CDD\|226123	COG3595, COG3595, Uncharacterized conserved protein [Function unknown].	5.68921e-06
NZ_CP014145.1\|WP_067231640.1\|3629394_3630030_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	2.30147e-22
NZ_CP014145.1\|WP_129586828.1\|3625010_3627098_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	5.60054e-36
NZ_CP014145.1\|WP_067231673.1\|3643834_3644848_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.26916e-95
NZ_CP014145.1\|WP_082717100.1\|3634448_3635936_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	6.87464e-79
NZ_CP014145.1\|WP_067231643.1\|3630026_3630893_-\|DUF4097-family-beta-strand-repeat-protein	gnl\|CDD\|226123	COG3595, COG3595, Uncharacterized conserved protein [Function unknown].	6.15369e-05
NZ_CP014145.1\|WP_067231632.1\|3627240_3628491_-\|family-1-glycosylhydrolase	gnl\|CDD\|274539	TIGR03356, BGL, beta-galactosidase.	2.84044e-133
NZ_CP014145.1\|WP_067231665.1\|3640090_3641044_+\|L-lactate-dehydrogenase	gnl\|CDD\|133428	cd05292, LDH_2, A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	3.55508e-157
NZ_CP014145.1\|WP_067231667.1\|3641052_3641586_+\|NUDIX-domain-containing-protein	gnl\|CDD\|240032	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.48656e-38
NZ_CP014145.1\|WP_067231647.1\|3631110_3631869_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	6.74587e-40
NZ_CP014145.1\|WP_067231662.1\|3639371_3640040_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.89603e-20
NZ_CP014145.1\|WP_067231691.1\|3650566_3651535_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.94532e-73
NZ_CP014145.1\|WP_067231655.1\|3633724_3634405_-\|hypothetical-protein	gnl\|CDD\|225239	COG2364, COG2364, Predicted membrane protein [Function unknown].	3.76702e-42
NZ_CP014145.1\|WP_129586762.1\|3644892_3647376_-\|hypothetical-protein	gnl\|CDD\|366008	pfam00295, Glyco_hydro_28, Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.	6.45203e-07
NZ_CP014145.1\|WP_067231688.1\|3649188_3650517_+\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	8.82516e-40
NZ_CP014145.1\|WP_067231635.1\|3628561_3629032_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.62892e-23
NZ_CP014145.1\|WP_067231685.1\|3647582_3649124_+\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	9.9185e-20
NZ_CP014145.1\|WP_082717220.1\|3642897_3643758_+\|formimidoylglutamase	gnl\|CDD\|212516	cd09990, Agmatinase-like, Agmatinase-like family. Agmatinase subfamily currently includes metalloenzymes such as agmatinase, guanidinobutyrase, guanidopropionase, formimidoylglutamase and proclavaminate amidinohydrolase. Agmatinase (agmatine ureohydrolase; SpeB; EC=3.5.3.11) is the key enzyme in the synthesis of polyamine putrescine; it catalyzes hydrolysis of agmatine to yield putrescine and urea. This enzyme has been found in bacteria, archaea and eukaryotes, requiring divalent Mn and sometimes Zn, Co or Ca for activity. In mammals, the highest level of agmatinase mRNA was found in liver and kidney. However, catabolism of agmatine via agmatinase apparently is a not major path; it is mostly catabolized via diamine oxidase. Agmatinase has been shown to be down-regulated in tumor renal cells. Guanidinobutyrase (Gbh, EC=3.5.3.7) catalyzes hydrolysis of 4-guanidinobutanoate to yield 4-aminobutanoate and urea in arginine degradation pathway. Activity has been shown for purified enzyme from Arthrobacter sp. KUJ 8602. Additionally, guanidinobutyrase is able to hydrolyze D-arginine, 3-guanidinopropionate, 5-guanidinovaleriate and L-arginine with much less affinity, having divalent Zn ions for catalysis. Proclavaminate amidinohydrolase (Pah, EC 3.5.3.22) hydrolyzes amidinoproclavaminate to yield proclavaminate and urea in clavulanic acid biosynthesis. Activity has been shown for purified enzyme from Streptomyces clavuligerus. Clavulanic acid is the effective inhibitor of beta-lactamases. This acid is used in combination with the penicillin amoxicillin to prevent antibiotic's beta-lactam rings from hydrolysis, thus keeping the antibiotics biologically active.	5.92209e-65

>NZ_CP014145.1|WP_082717100.1|3634448_3635936_+|PLP-dependent-aminotransferase-family-protein
MLEATPVVPARITHAAGTPASSARSIGARTLATLIGEWREAGPAYGALADRIRLLVIDGRIPVDTRLPAERELAEQLELSRTTVTAAYRQLRELGFLQSVRGSGSVTRLSGSPGMLSVPGDRGYLDLSKAAMPALPWLTEASRRAVDELPRHLGDAGYDPVGIPELRAAIADRYTARGLPTQPEQIMVTIGAQHAIALLSRALVGRGDRALIEQPTYPHAYEALRAAGARLVPVSVMSDAAERGLETAGFEQAIRQSNPAMAYLMPDFHNPTGRSLDEGQRERILAAAAKQGTVVVADETTAELNIDRPDTPLPMAAFGDAVLVGSIGKTVWGGLRIGWIRAEKPLIRKLIGLRAPGDLGTPILEQLIATELLPEMPRILELRSAQLRAGRDHLERQLAERFPQWSVPHVHGGLATWVNLGAPVSSQLALAARNHGLLVAAGPRFGIDGAFERFLRLPISYSAEETTRAVDALSLAWGSLLRHPVPDAGYLADVV
>NZ_CP014145.1|WP_067231655.1|3633724_3634405_-|hypothetical-protein
MQLDCRVASSTHPLTPVTGRLPLRISQLLVGLFLYGIGMALIMRGEIGAAPWDVLTQGIVKHTGLSFGLITVLISAVVLLIWIPLRQRPGIGTVLNALLVGPSADIGLALIPAGLDLWARVLLFVAGLLVLAVATGLYIGAHFGPGPRDGLMTGLNARTGWAIWTVRTGLELSVVTLGWILGGNVGLGTAAFAVLIGPLCQWTIPFFAVKPRAADAAAPALDPAAG
>NZ_CP014145.1|WP_067231651.1|3632552_3633290_+|DUF4097-family-beta-strand-repeat-protein
MRTTFRTVTAVAGIAIAALALSGCALLPAHATNDKATLTETVSAVRINGNSGSVTVQGVVGATDIRIEREIHYWGNKRQFDATYEVSGTELVLNGCGNRCSVDYTVELPEGVDVSGRTDNGAIELEAVNDVDVQTSNGKISLDEVAGRVKASTSNGRIEGEALNGAGIIAKTSNGSIELELETPQNVRANTSNGSITLHVPSGSFNVKAETSNGAKNINIPTDPNGTFLLDVGTSNGSITVSPVD
>NZ_CP014145.1|WP_067231647.1|3631110_3631869_+|MerR-family-transcriptional-regulator
MDWSIHEIAKLAGTTSRTLRHYDEIGLLTPSRIGANGYRYYGQAALVRLQRIRLLRELGLGLPAIAEVLANERDEGQALRGHLGWLQQEQQRLARQIASVQQTIHDLEGGQQLMAENMFDGFDNSQYKEEVEQRWGTKAYAAGDAWWNSMSAAEKGDWQQRQKQLAGEWADAAARGVDTGGDEAQALARRHFEWLRAIPGTPGGGTSGPPKAYLLGLAEMYVADERFAANYGGVVGAEFVRDALTAFAEREL
>NZ_CP014145.1|WP_067231643.1|3630026_3630893_-|DUF4097-family-beta-strand-repeat-protein
MAIEKWLIQPGDSKVIDLELVRKLKVSLIGGKIDVLAHDEPGARVEVHSVTSKELKVEIDGDTLEIDHPQLRWDNFIDAFKGFKGSAKAEVSVLVPRDVAVKLGVVSASALVSGFATDAKVSTVTGDIVIDHVIGDLDANTVNGEVSVGHHTGRINVNTVSGDVVASGAITRFHADGVSGNMILDVVGTPAEVNTNTVSGDLTVRMDSGRGERYRVNTVAGTVFLDDTNFKGTLGKGFERVIGDLSGSWLDLQANSVSGNISIVRRHAASSADSDSGFRVTHDGEASA
>NZ_CP014145.1|WP_067231640.1|3629394_3630030_-|helix-turn-helix-transcriptional-regulator
MTPPVFAHGSLRLYLLSLLAEQPRHGYELIQAMSDRFGGSYIPSAGTIYPRLAKLEEEGLVSKESDGRKTTYSITDAGRAELEARRGELDSIEEAMTDSVRRIADEVRAGVNDAMRSLRADLASAARSARQSGKTESAKAAASAGPTMQAHQESVRALHDAELTLNQFRQELRTELRTQAARGNVPQEAATLLRERLDAVRTEVLDLLKTK
>NZ_CP014145.1|WP_067231638.1|3629112_3629349_+|hypothetical-protein
MARSKNDGTGGKLAGLFDRLNRKLVPYIGPPPLGPYNETPPAVPAPRLCPLCGVAMDEHEIDRSGERTQLYCPPRAQA
>NZ_CP014145.1|WP_067231635.1|3628561_3629032_-|MarR-family-transcriptional-regulator
MSSTPTKTQDEAATVDLLALESQVCFGLAVAARGVIGAYRPILEPLGLTHPQYLVMLALWQSSPRTVRDLGEALQLEPATLSPLLKRLEGIGYVSRARNAQDERALDVSLTDAGRALREQALEIPPQIIDRLGMSLDELAELRTTLSRVIAAVGAA
>NZ_CP014145.1|WP_067231632.1|3627240_3628491_-|family-1-glycosylhydrolase
MSIFRAPHTDAVTARHFPDGFLFGAATAAGQDDGAADDVALMTELGLAAYRFSSSWSRACPDGGALDQRGVDAYRRLCDELLNAGITPWLTLYRGDLPEPLAAQGGWANRDTAYRFRDYALGLHEALGDRVPVWLTLGEPWGPGGLDLAAGPSTAHHRLLAHGLAVQALRERDAALRLGVTLNLTVATPADPASAADLDAARRVDAQFNRAALGPLFRGSYPEDFLQDAAGLDLQAHVLSGDLAQIAQPIDLLGVNYYHGAVVSELAGDPPTPGAVEPPPPAPLPPLTAVDWEVQPDGLRRLLVAVEAEYTGPARAELYVTENGVASDDTLEPDGAVDDAERAEFLHSHLGAVLDAVDAGVDVRGYFYCSLLDTAAAARSDEGCSGLVHLDESGRRTLKRSGSEYRRIITARTLAP
>NZ_CP014145.1|WP_129586828.1|3625010_3627098_-|APC-family-permease
MIGDPLPSEKLEGQLLPKHLALPIFASDPLSSVAYAPQELLMILMIGGLAFLSFAPWVALAVIVLLVTVVASYRQLIKAYPSGGGDYEVANRNLGEKSGLVVASALLVDYVMTVVVSVASGVDNIISAIPELNGFRVELAIVFVVILAAVNLRGVSESSRAFAIPTYLFISSVALMIVVGLVRTMFGDAPVAESAGYAVQAEQLTQAAVILLLLRSFASGCSALTGVEAISNGVPAFRAPKVKNAQGTLVLMGGIAIVLFAGLTALALITQVHYAESACNLVGFPDCENQPQRSLMAQVAAATFGNNSILFFVIQASTALVLLLAANTAFNGFPLLGSVLAKDGYAPKSLSTRGDRLIYSNGVLLLALAAIVILAVFQANLTVLIQLYIIGVFVSFTLGQTGMVVHWLRELKKPKPDRGAIWRGLAINALGAAMTAVVLLVVTVTKFTHGAWLVFLMMPILFLLMLGVNRYYRDVSKEIEVDPTTTFGSQGDHAIVLVGNMQKPVLKALDYAIAARHETLEAVHVSIDDEQTKQLKKDWVRMNIQVPLRVLSSPYRDLSHPLIQYVKSRRVEHGSEVTTIYMPQYIVGHWWEGLLHNHKARRVRQKLMLVHGVTIALVPWLLDSSQLIYGRRSRPIPGQDRRGEPVRPVQRKPIAPATVLNGRPQPRPGAATGGPPPGAPASTSRPANSRRRKRK
>NZ_CP014145.1|WP_067231662.1|3639371_3640040_+|class-I-SAM-dependent-methyltransferase
MTDFDKDYWERKHQDESHTSAASGTLDTVPHPYLATETAGLTPGTALDAGCGTGAEVVWLADHGWQVTGADISSTALARAAARAADAGLSDKVSWVEADLTTWEPEHQFDLVASSYAHPTIAQLDFYERIARWVAPGGTLLLVGHLHDSSGQQHEHGHEHEHEHGHGHRPPAEATVTLDDIRGRFASAGWQVETAEEHDRTLTSPGGQQVSLRDVVVRATRA
>NZ_CP014145.1|WP_067231665.1|3640090_3641044_+|L-lactate-dehydrogenase
MTLTRGTKLTVVGAGSVGSSLAYAALIRNSAREVVLYDIATAKVEAEVLDLAHGTPFAGPSSISGGSDIDLTADSDVVVITAGAKQQPGQTRLELAGVNVRILEAMLPQLVALSPNAVFILVTNPCDVLTAVAERITDLPKGRIFSSGTVLDSARLRWLVAEAAGVAPQSVHTLIVGEHGDTEFPLWSAATIGQTPLSAWTDADGTALFPRERLETLTHDVVNAAYKIIEGKGATNYAIGLSGARIVEAVLRDERSILPVSSVLHGYRGIDGVALSLPSIVGAGGVQRVLDVAFDAREEELLHHSAEALRRSIELFA
>NZ_CP014145.1|WP_067231667.1|3641052_3641586_+|NUDIX-domain-containing-protein
MATPDFVLALREKIGTAPLWLSGATAVVLRARSASDSAASGSAASDSAASGSHEVLLVRRADNGAWTPVTGIIDPGEEPADAAAREVLEEAGVVAEVERLAWVQSLPERAYVNGDRAAYLDLVFRCRWVSGQPHPADGENTDAAWFPLDALPEMSPNMRERIAEALKPAGPTRFNRT
>NZ_CP014145.1|WP_067231670.1|3641630_3642626_+|oxidoreductase
MRILILGGTAWLGREIAGQALARGYGVTCLARGESGDVPVGAELIAVDRASPDAYADAAHRQWDAVVELSWQPGFARAALSELGGRADHWTLISSTSVYAAADQIDADESAELFAPFVGDRATKADYGSAKAAVELASRAARGDTLFVVRPGVIGGPGDESGRSGAWVARAARAPEQPMLVAAESATPTQIVDVRDLATFVLDSAERGALGTVNTVGPIVPLGEWVELSRRVGGHEAETIAAPSAWLLAQGVEEFMGEESVALWLADPDFAGFSARSGRAAVAAGLRHRPRAELVADVLRWEHQRGLDRPRGAGLSAAREAELLKLLAREP
>NZ_CP014145.1|WP_082717220.1|3642897_3643758_+|formimidoylglutamase
MPGAHIDLALIGLPAWRTSLSTTNAGETPDAIRAVLPRYSDALIADRGVRGDIRSLADLTIVDLGNVHEPDGPEGEKRALAAVARAAGLADMVVALGGDNSVTVASALGVWGEALPSAGLITLDAHYDLRDGVNNGSPVRRLVEAGLDGGRIVQIGIADFANSRRYAERARDYGITVVHRDELHRRPMADVMAEALDIAGSAGGPVHVDLDVDVCDRSVAPGCPASVPGGISAYELRQAARTAGADPRVRSVDIAEVDATADAADGRTVRLAALCVLEVAAGLALR
>NZ_CP014145.1|WP_067231673.1|3643834_3644848_+|LacI-family-transcriptional-regulator
MTRRATIREVARLADVSLGTISNYLNDNKPIAPETRERIESAIAQLGFIPNAGVRVMRGGRSHAIAFLIPDSGNPFLAEVARGIEDVAIGAGHVVVTCNTDGDPEREEHYARALSEMRVVGAVAMAMSASETALRRLETSGAPVVILGGGSHGFGFPGIDVENTHGGYIAMRHLLSLGHRDVVFVGGPGAEPQIEDRFLGALRALDEAGVERSRLRRVNATGNTTAARREAAERIVDEIPDATAAFCANDMIALTLESVLLHRGVAVPGQFAIVGYDDIESAELAPVPLTTIRQPQYDLGRAAAELVLELASGDSAAGRTRSFEPELVVRGSTVPQL
>NZ_CP014145.1|WP_129586762.1|3644892_3647376_-|hypothetical-protein
MHLTPRPHHHRALTTRRTLASVLALTLVALTFALSAPTRSWADTGTIQTWQPPSGTASNPDFAVAVRASGTSSWTNLFTYRVKLGHQDGSTFDASMVNFDFTGTIDVRVSYNAAPLTSYEIRPSSYAIAGTQSSNTVTFPLTQNTDAPRKLVFRANGSWEGATLHLLTNPLEVNAPDPSAANVFTVQPGQEAPLQLPQGKDTYYFAAGEHTLPRGMWAEFDLGAEYPLDRIQLAQSTFQIGIGMTPTAYPNKYTVETKRAASDPYTLAVDGRSNTQTGEVTNTFTPRAARYIRVKLLGSATATGFQFSNAVSEFRAFAGSSGNLAQGRAAAGAMPNFATIADGSTTSAYASESGYGNWHSGETFFIRESSTVYLAPGSLVHGAFGSDGISNITIRGRGILDGSTLTHDVAGQGEVRTGSIWLTGGSDNTVEGITILDPTMWTVVMNFATRPKVKNINILAYEVNADGIHFSGSSDGLVSGVFIRTPDDNIVMYHYGTGRRNVFTNSVFWGDDAHIFLFGLGTVPNAEISDITVSNSDVLNQQGVYDLDKFNGVMKVWPNGNNHTSNITFSNIRIDSFRDPSKAVVFQLRSDERFAGEGGGTISNVTLSGIQVNGTGERASTIAGTGAITGVQIAGYTRAGATVSNPTNGNFAISGLVSDVKVNGTNIPTGPPSSLRNTSFEAPSMPGSFQYTPSGSEWTYFREAGIASNGSLFGVGLYGAANAPDGSQVGFVQKRGRLEQSFGSAPVGASYRVRFSLAARPGDAAPQTVKVTFDNVLLGSYTPGSTSYVEFTTPPITQGGGTHTIGFEGTTDADRTAFIDRVSVIPG
>NZ_CP014145.1|WP_067231685.1|3647582_3649124_+|ADP-ribosylglycohydrolase-family-protein
MTISTTFESATLSAETIRQKIQGCWLGKAVGGTLGQTFEGLSGPLEADFYYPVPTEMVPNDDLDLQVVFACVLAALETPIVDRHVLADAWRRHVDFPWNEYGVAMRNQAEGIHPPHTGSFDNWFTCGEGAAIRSEIWACLAPGNPDLAAAYAYEDACFDHEGDGIYAAQFLARLQSAAFVESDPQTLIDIALAGIPADSGIAAVVADTRRWVAEATDWRDVQALIMEKYGRQDFTDVRPNTGFVILGWLMGADFSERICITNNSGQDCDSSTASIGALLGILDPGSIGQEWLAPIGDELVLNEEIRGLEHPATIAGFTDLVVDLGRRLSGEAPNAEEYPFDPSAHRIPVGIGHFNTTQGRWDIRDQSELPPVGSPAPAVETAPSSLPGTVVSMPRESFHDRLMLLTFAANSRGRSAVRLMFNCTEDYRIWLDGEFLHGAQGSALFFPAPHMAPVGQFVDFSMAEGEHALTIAIKRPPLERAAADWVLGLVEMPSALWIEHAFRPSPLAPESTF
>NZ_CP014145.1|WP_067231688.1|3649188_3650517_+|carbohydrate-ABC-transporter-substrate-binding-protein
MFKKKTMATGAIIVAFAAGSLGLTACSSDATVSEGASDKTTVNWWSWDPDNSNYQAWVDAFEAENPDIDLKFRFIQYSDYENAVRLAAKSDSGPDVFGIEPGAMSEQFAPLTLDLTTLAEEEIGADWQDQLLGTDQLAVEGKQVSLPWKLGGGGLIWYNKNILDAAGATPPTNLAEWKDMCAKVEAQGVTCFVHGAKDDWVNLDVFQAIANQIDPGAIYAAFDGEKKFNTPDMVSAFDAWKGLFDEGIIQPGALGMTQYPDANDAMSKGEAASIAFGTWHNDHMTKARLAGSVETYGPDIVNQVFLPIAFPDVVGGAQETGRLFGAPAGWAISSKSKQQEAAFTFVKWFTTSETAQSMIASALNQPALASMPVTSDDLVAPELQQPALDEQAKQFANLIGPRQISNADVASALGQALSAVASDQMSSKDAAASVQAAIDGAK
>NZ_CP014145.1|WP_067231691.1|3650566_3651535_+|sugar-ABC-transporter-permease
MTIPTLLRPREADAPLDAPARRARPGLPRFRSPRTRAQLTPWLYILPALILVVGIIYVGIGYTGWVSTLDWNGIDENPESVGVQNFLDIAVDPVFWMSLSHVLIFGVVTIIVQMVLGLMMAVLLSGNAVKGKAIYSVIMFIPVVLAPAAIATAFREILNTDGQFNQALRVFGFSEADTAWLADPQFALLAICAINIWQWTGFSFLLYQAAISQLDQNTFDAAAIDGAGFWRMGRHILLPQLNGTHATLALVGCIGALKTFDVVYLTTGGGPGRSTEFLTTYIYSQIVERYHAGYSAALSVVLLVLALILTAIQLRLYKTGDE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014145_9	9.1\|2803874\|25\|NZ_CP014145\|CRISPRCasFinder	2803874-2803898	25	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	316289-316313	4	0.84
NZ_CP014145_9	9.1\|2803874\|25\|NZ_CP014145\|CRISPRCasFinder	2803874-2803898	25	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	132560-132584	4	0.84
NZ_CP014145_9	9.1\|2803874\|25\|NZ_CP014145\|CRISPRCasFinder	2803874-2803898	25	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	451809-451833	4	0.84
NZ_CP014145_9	9.1\|2803874\|25\|NZ_CP014145\|CRISPRCasFinder	2803874-2803898	25	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1170907-1170931	4	0.84
NZ_CP014145_9	9.1\|2803874\|25\|NZ_CP014145\|CRISPRCasFinder	2803874-2803898	25	MT740734	Ralstonia phage Dina, complete genome	13380-13404	4	0.84
NZ_CP014145_11	11.1\|3639180\|33\|NZ_CP014145\|CRISPRCasFinder	3639180-3639212	33	NZ_CP015989	Sphingobium sp. EP60837 plasmid pEP2, complete sequence	88629-88661	5	0.848
NZ_CP014145_11	11.1\|3639180\|33\|NZ_CP014145\|CRISPRCasFinder	3639180-3639212	33	NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	31298-31330	8	0.758
NZ_CP014145_11	11.1\|3639180\|33\|NZ_CP014145\|CRISPRCasFinder	3639180-3639212	33	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	61759-61791	8	0.758
NZ_CP014145_11	11.1\|3639180\|33\|NZ_CP014145\|CRISPRCasFinder	3639180-3639212	33	NZ_CP050138	Sphingomonas sp. CL5.1 plasmid pTSSC1, complete sequence	49315-49347	8	0.758
NZ_CP014145_11	11.1\|3639180\|33\|NZ_CP014145\|CRISPRCasFinder	3639180-3639212	33	NC_009508	Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence	85130-85162	8	0.758

1. spacer 9.1|2803874|25|NZ_CP014145|CRISPRCasFinder matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 4, identity: 0.84

tcacccgacccgcgctgccctgccc	CRISPR spacer
tcacccggcccgcgctgccccgcgg	Protospacer
*******.************.**

2. spacer 9.1|2803874|25|NZ_CP014145|CRISPRCasFinder matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 4, identity: 0.84

tcacccgacccgcgctgccctgccc	CRISPR spacer
cgacccgacccccgccgccctgccc	Protospacer
. ********* ***.*********

3. spacer 9.1|2803874|25|NZ_CP014145|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

tcacccgacccgcgctgccctgccc	CRISPR spacer
aaacctgacccgcgccgccctgccc	Protospacer
  ***.*********.*********

4. spacer 9.1|2803874|25|NZ_CP014145|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

tcacccgacccgcgctgccctgccc	CRISPR spacer
ccacccgacccgcgctttcctgcca	Protospacer
.*************** .******

5. spacer 9.1|2803874|25|NZ_CP014145|CRISPRCasFinder matches to MT740734 (Ralstonia phage Dina, complete genome) position: , mismatch: 4, identity: 0.84

tcacccgacccgcgctgccctgccc	CRISPR spacer
ccaccccacccgcgctgccgtgccg	Protospacer
.***** ************ ****

6. spacer 11.1|3639180|33|NZ_CP014145|CRISPRCasFinder matches to NZ_CP015989 (Sphingobium sp. EP60837 plasmid pEP2, complete sequence) position: , mismatch: 5, identity: 0.848

--gtgagccggcccgcgctgggtgcgcttgccccc	CRISPR spacer
cagcgtgcc--cccgcgcagggtgcgcttgccccc	Protospacer
  *.* ***  ******* ****************

7. spacer 11.1|3639180|33|NZ_CP014145|CRISPRCasFinder matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gtgagccggcccgcgctgggtgcgcttgccccc	CRISPR spacer
gtgatcctgcccgcgctgggtgcgatcgagcga	Protospacer
**** ** **************** *.*  *

8. spacer 11.1|3639180|33|NZ_CP014145|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.758

gtgagccggcccgcgctgggtgcgcttgccccc	CRISPR spacer
cggcgccggcccgcgctgggtgctcgtgtgcac	Protospacer
  * ******************* * **. * *

9. spacer 11.1|3639180|33|NZ_CP014145|CRISPRCasFinder matches to NZ_CP050138 (Sphingomonas sp. CL5.1 plasmid pTSSC1, complete sequence) position: , mismatch: 8, identity: 0.758

gtgagccggcccgcgctgggtgcgcttgccccc	CRISPR spacer
cagcgtccccccgcgcaggctgcgcttgccccc	Protospacer
  * *.*  ******* ** *************

10. spacer 11.1|3639180|33|NZ_CP014145|CRISPRCasFinder matches to NC_009508 (Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence) position: , mismatch: 8, identity: 0.758

gtgagccggcccgcgctgggtgcgcttgccccc	CRISPR spacer
cagtgtccccccgcgcaggctgcgcttgccccc	Protospacer
  * *.*  ******* ** *************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1009788 : 1021753

Arthrobacter_phage(44.44%)

portal

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067226928.1\|1009788_1010199_-	M23 family metallopeptidase	A0A1I9S7S4	Rhodococcus_phage	3.9e-09	31.9
WP_067226929.1\|1010198_1010711_-	hypothetical protein	NA	NA	NA	NA
WP_129586634.1\|1010721_1012164_-	hypothetical protein	NA	NA	NA	NA
WP_129586635.1\|1012151_1013891_-	hypothetical protein	A0A2R3ZZQ3	Microbacterium_phage	1.0e-29	66.7
WP_067226932.1\|1014290_1014647_-	hypothetical protein	A0A222ZGZ9	Arthrobacter_phage	4.5e-22	50.5
WP_067226933.1\|1014649_1015042_-	hypothetical protein	A0A221J6S8	Arthrobacter_phage	3.7e-17	39.5
WP_067226934.1\|1015034_1015457_-	hypothetical protein	A0A221J6S1	Arthrobacter_phage	2.5e-35	52.9
WP_067226935.1\|1015467_1015854_-	hypothetical protein	NA	NA	NA	NA
WP_067226936.1\|1015853_1016183_-	hypothetical protein	NA	NA	NA	NA
WP_160329719.1\|1016182_1017778_-	hypothetical protein	A0A222ZG59	Arthrobacter_phage	2.7e-21	44.4
WP_129586636.1\|1017584_1018598_-\|portal	phage portal protein	A0A2R3ZZH4	Microbacterium_phage	4.7e-56	47.5
WP_067226939.1\|1019202_1020960_-	hypothetical protein	A0A2P1CBZ2	Gordonia_phage	4.0e-79	41.2
WP_067226940.1\|1021063_1021753_-	hypothetical protein	G9FGW5	Rhodococcus_phage	3.8e-09	46.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014145

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection