CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_LN907827	Erwinia gerundensis isolate E_g_EM595 chromosome 1	5 crisprs	DEDDh,DinG,cas3	2	2	2
NZ_LN907828	Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence	0 crisprs	csa3	0	0	1
NZ_LN907829	Erwinia gerundensis isolate E_g_EM595 plasmid pEM02, complete sequence	0 crisprs	csa3	0	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LN907827_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN907827_1

183466-183575

Orphan

Consensus_repeat	Method
GGCAGAACGAAATGGCCGTTGACCTTAAGACCTTGACCTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN907827_1

>merge|NZ_LN907827|1|183466-183575|CRISPRCasFinder
GGCAGAACGAAATGGCCGTTGACCTTAAGACCTTGACCTTAAGACGTTGACCTTAAAGCCGCCAGCAAGGCAGAACGAAATGGCCGTTGACCTTAAGACATTGACCTTAA

>NZ_LN907827|1|1|183466-183575|CRISPRCasFinder
GGCAGAACGAAATGGCCGTTGACCTTAAGACCTTGACCTTAA	GACGTTGACCTTAAAGCCGCCAGCAA
GGCAGAACGAAATGGCCGTTGACCTTAAGACATTGACCTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN907827.1\|WP_067426864.1\|183694_184072_+\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|184564
NZ_LN907827.1\|WP_067426870.1\|185594_186086_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182263
NZ_LN907827.1\|WP_067426875.1\|188064_189192_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|377314
NZ_LN907827.1\|WP_067426839.1\|173836_174079_-\|DUF1158-family-protein	unknown	unknown	gnl\|CDD\|369016
NZ_LN907827.1\|WP_067426854.1\|179031_180387_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_LN907827.1\|WP_067426856.1\|180541_181450_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_LN907827.1\|WP_157883831.1\|174366_174462_+\|stress-response-protein-AzuC	unknown	unknown	unknown
NZ_LN907827.1\|WP_067435037.1\|184977_185574_-\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|183144
NZ_LN907827.1\|WP_067426872.1\|186230_188063_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_LN907827.1\|WP_067426878.1\|189291_190686_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273326
NZ_LN907827.1\|WP_067426887.1\|192217_192979_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN907827.1\|WP_067426848.1\|176731_177646_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_LN907827.1\|WP_067426885.1\|191045_192221_+\|HD-GYP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_LN907827.1\|WP_067426867.1\|184168_184981_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_LN907827.1\|WP_067426842.1\|174588_175575_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_LN907827.1\|WP_067426851.1\|177638_179027_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN907827.1\|WP_067426836.1\|171879_173496_-\|malate-dehydrogenase-(quinone)	unknown	unknown	gnl\|CDD\|179979
NZ_LN907827.1\|WP_067426881.1\|190811_190991_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN907827.1\|WP_067426858.1\|181587_182610_+\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176222
NZ_LN907827.1\|WP_067426845.1\|175587_176268_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LN907827.1\|WP_067426864.1\|183694_184072_+\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|184564	PRK14196, PRK14196, fluoride efflux transporter CrcB.	1.23279e-56
NZ_LN907827.1\|WP_067426875.1\|188064_189192_-\|N-acetyltransferase	gnl\|CDD\|377314	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition. FemAB_like is a family of both baterial and Viridiplantae proteins with responsibility for building interpeptide bridges in peptidoglycan. Such a function is feasible for bacteria but less likely for the plant members of this family. Perhaps the plant-members are using homologous proteins to recognize bacterial peptidoglcans as part of their innate immune system.	0
NZ_LN907827.1\|WP_067426839.1\|173836_174079_-\|DUF1158-family-protein	gnl\|CDD\|369016	pfam06643, DUF1158, Protein of unknown function (DUF1158). This family consists of several enterobacterial YbdJ proteins. The function of this family is unknown.	1.11548e-26
NZ_LN907827.1\|WP_067426854.1\|179031_180387_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.33686e-97
NZ_LN907827.1\|WP_067426870.1\|185594_186086_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182263	PRK10140, PRK10140, N-acetyltransferase.	4.59341e-36
NZ_LN907827.1\|WP_067426836.1\|171879_173496_-\|malate-dehydrogenase-(quinone)	gnl\|CDD\|179979	PRK05257, PRK05257, malate:quinone oxidoreductase; Validated.	0
NZ_LN907827.1\|WP_067435037.1\|184977_185574_-\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|183144	PRK11460, PRK11460, putative hydrolase; Provisional.	2.48966e-34
NZ_LN907827.1\|WP_067426872.1\|186230_188063_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.75516e-144
NZ_LN907827.1\|WP_067426878.1\|189291_190686_-\|MFS-transporter	gnl\|CDD\|273326	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.30788e-106
NZ_LN907827.1\|WP_067426848.1\|176731_177646_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	7.44053e-18
NZ_LN907827.1\|WP_067426885.1\|191045_192221_+\|HD-GYP-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	3.49161e-81
NZ_LN907827.1\|WP_067426867.1\|184168_184981_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	4.73079e-23
NZ_LN907827.1\|WP_067426842.1\|174588_175575_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	4.96334e-23
NZ_LN907827.1\|WP_067426856.1\|180541_181450_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	2.63475e-25
NZ_LN907827.1\|WP_067426858.1\|181587_182610_+\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176222	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	9.61929e-155

>NZ_LN907827.1|WP_067426858.1|181587_182610_+|zinc-binding-alcohol-dehydrogenase-family-protein
MTTMNTLVCAEPRSMQWQTREKPTAQPGEALLKIVAAGICGTDIHAWGGNQPFFSYPRVLGHELCGEVVALGSGVSDFHVGQRVALMPYLSCQRCGACQSGKSNCCENISVIGVHQDGGFCDFLSVPVSNLLAVDALPPEAAALIEPFAISAHAVRRATIVADDHLLVVGAGPIGLGVAAIADAAGAKVVVADTSDFRREHVAQQLGLVTLNPLDAGFDAALRDQFNGMLAEKVIDATGSPAAMNGVVNLIRHGGSVVFVGLHKGDLVIPDSDFHKKETTLMGSRNATREDFDKVRELMAAGSLRADMMFTHRFAFAGLADEFEEGVINNRNLIKGVVFF
>NZ_LN907827.1|WP_067426856.1|180541_181450_-|GntR-family-transcriptional-regulator
MSRSQDLRHNVINQMLDGIEQRHIPSPLPPQAALAEMFNISRTTVRHTLHYLHQRGVLEKVHDSYVIVRQPAGEDRLADVALPIAEQAARVEEAFFQMINQRQLLAGDNFSELQLAQTMRVSPVVVREFLLRFMRYDLLEPIRRGHWRMKKFDQAYAEQLFELREMLETHALNRFINLPASDERWIRIRDLLDRHRELRDSIASSYRRFAELDKAMHTLILSAANNVFFNQSMEIISVIFHSHYQWDESDLKQRNIIALEEHMAILTAMIHRQDLNAQRALHRHLATAKSSMIRSINQYQRN
>NZ_LN907827.1|WP_067426854.1|179031_180387_-|MFS-transporter
MAMENITGRKSDTVSTPPGDEFIPARGALVRSPRIRKIQITAMTLLLLAAVINYLDRSSLSVANMTIRQEMGLSATEIGLLLSAFSLAYGIAQLPCGALLDRKGPRIMLGIGMFVWSFFQALSGLVNNFTHFILVRIGLGIGEAPMNPCGVKVINDWFNIKERGMPMGFFNASSMIGLAISPPILAAMMMVMGWRGMFITIGVFGMVLAIGWYMLYRNRDNNILSAEEIHYLQAGSVAARKEPMSFAEWRGLFKNRTMWGMMIGFSGINYTAWLYIAWLPGYLQSTYNLDLKSTGWLTAIPFLFGAAGMLLNGYVVDALVKRGMQAVKTRKVCIVAGMLLSAAFTAVVTRADSTGSAVLIIGMALFCIHFAGTSCWGLIHVNVTARMTASVGSIQNFASFIFASFAPVITGWILDTTKSFSLALTICACVTVVGAMAYLFMVKKPIVDQVP
>NZ_LN907827.1|WP_067426851.1|177638_179027_+|hypothetical-protein
MSKAPRGIARFDSAAAMVAALASALHQQPFSSPSQSPALDRLLPALNRLPDTLREWGYAIGGMAEGITLKKAQKLDVEGINQWMCEQYPQRDYPAAFIGSSNGAMVHLASAMGIPWLPQTFLCPVRSLDNDPDDAQRGFEQGRPVIDALLAVSPHLAVHHMQDPNQDRLMLDQMSYFRLKQRRLTLSTKEFLLSSLPPGSTLIVNHCRQSWPVTRTNDRACFQFGALGGASEQEYFTGGPRVAEYLARYGVDRDRWQPPEPNARLPEAEWGFDPALLPELRELAADQNWTLLELSYEHPEDLSFVTAEIYRDWYIAAGILPTRLVVDNFLLMDPWVTQQLHAIPFWLVFCTEPSANNLQRFLDKQPPFNHIDMLLFSHGTESIGMAPIARWQQLLDCAKEEGAFVGADAERYPRDFATLSRFDEALQQRAPLQAPPPPLALDKLISGIQRYGEKFGVTLTPL
>NZ_LN907827.1|WP_067426848.1|176731_177646_+|alpha/beta-fold-hydrolase
MKEKTQRNGKQRALMVAMAAGMAGTVWGIKKWRALQQTPPVGIHSHHAGLAGYYQQVGRWRIFTRATAKPMPGLPVVLIHGLVLSGRAMEDLAIALSWDFRVLVPDLPGYGASAMPASSPTLTVDQQADALWQWMQHNDIPRALFIGNSFGCQVLAALAVRHPEAVAALVLQGPTVDRHARFLPVQMWRDWRNGRREKFHSPASLSRVDYAKAGVFRALASIRIMMRDRIEQRLPYIQAPTLLVRGSRDVVSPARWIEEMDALLPDSEILTLQQGTHTLNYVYPWNFCRAIRPFLMANREHDHE
>NZ_LN907827.1|WP_067426845.1|175587_176268_-|hypothetical-protein
MSIQQQVARQVAATPPGKIIVSRDFPAWKSAPNGLSKALSRLVASGELARFAKGQFYRPKTGMFGQQQPTDSEKLRPLLFENGKRTGYITGLRLFNILGLTTQLSRTIEISRNSTKQNKKIGALEIIIIPSRAPVTDINIPYLEILDVVRALSRIPDTSLETTIARLRSLLKKNNAIEKETLINLALTYYPPATRYRLAHIISPLAPELEKRLRASLNPTSRFRIV
>NZ_LN907827.1|WP_067426842.1|174588_175575_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MDLHAEKDAFTDIISGAARYFNISEIYIEKDYWVTLLLYRLSQYEKKDRLIFKGGTALAKASRIINRFSEDIDLAVLMPEANGNQIKTFMRHAETAITTDLIALPGYSGESKGSVFRKTYYRYPQEFQGDFAQASQVILLEINAFNKPEPVYPLPVCALITDFLKLHDQKPLIDKYHLDRFILFTLGIERTLTEKLVALIKAARSPDALMQLTIKIRHFYDICMILRHADYSIPLYDLTLLPLLQSVVDADRQQFTNAGNWFNEPLDTIPLFCQPEKYWPALNSAFRQSFALMVFDNELPDDKEVIAALNAIQRLLTHYQLQAGMRQA
>NZ_LN907827.1|WP_157883831.1|174366_174462_+|stress-response-protein-AzuC
MNQAIVMRRFIKYVFRTYVNTFKHVPPGAMS
>NZ_LN907827.1|WP_067426839.1|173836_174079_-|DUF1158-family-protein
MNNPFEALAMPGSILLLGFLSALLLPAPAFGLQLANHLMTLFHFSDLGQLYTIVFGLWFLLLGTLEFFLIRFVWRRFFRV
>NZ_LN907827.1|WP_067426836.1|171879_173496_-|malate-dehydrogenase-(quinone)
MRKSSSLLALSMNAIGASPEAVADRQKEVDVLLIGGGIMSATLGTYLQALEPDWTVTLVERLDQVAAESSNGWNNAGTGHAALAEMNYTPQNADGSVNIDKAVAINEAFQVSRQFWASLVQKGVLHNPRSFIQTTPHMSFVWGDENVDFLRKRYHALQKNSLFRGMEYSEDPQQIARWVPLVMKGRDAKQKVAATRTLMGTDVNFGEITRQLVAALCKHPQFSLKLRHDVRDITRLADGRWQVTLVDLNNGGAQQVIRAKQIFIGAGGAALPLLQKAGVPEAKGYAGFPVGGSFLVTENQEVVKRHLAKVYGKAAVGAPPMSVPHLDTRMLDGKQVLLFGPFATFSTRFLKSGSLLDMFGAMNGSNLLPMARVGIDNVDLVKYLVGQVLQTDEHRHQALQEYLPEARPEDWYLVKAGQRVQIIKKDEKKGGVLRLGTEVVASADGTISALLGASPGASTSAPIMIELMNKVFKTQMASPEWQAKLKTLIPSYGQKLSGNVAATEHVLATTSRILQLDYTLATLVANDEDSSTGAVVGK
>NZ_LN907827.1|WP_067426864.1|183694_184072_+|fluoride-efflux-transporter-CrcB
MLKSMLAVMLGGAVGCTLRWLISLRFNALFPNLPPGTLIVNLAGGFIIGAAMAWFVKNPQIDPLWKLLIVTGLCGGLTTFSTFSAEILMMLQSGKYLWAMGSVLVHVVGSLLMTFAGFTLITLLG
>NZ_LN907827.1|WP_067426867.1|184168_184981_+|sugar-phosphate-isomerase/epimerase
MRNPTFLNLVLLSGDAAQKLRTASAAGFEQVEIWREDAGQNTAALAQLAGEIGLGFTNLQVLRDATGVPTAQREAKREEARMFFQLAKQLGCDTVQAPASTDKQCVAENIDDDLRWLSAEAARHNLRLMYEPMAWSQIDYTLPQAWQRLQRLNLPNVGLVVDLFHICARGGSVSDLAGIPMHRIYEVQLCDVAEPVSPQEMERLFDTARHRRQLPGEGYLPIAEFVDYLKSAGYAGPVGIEVFNDHLKQLSAEAAAQRAFQALRRAWPED
>NZ_LN907827.1|WP_067435037.1|184977_185574_-|prolyl-oligopeptidase-family-serine-peptidase
MRKGLVIFLHGVGSNGDDLAGLGEHWAPLLQGVSFAAPDAPFHFEHGAGFQWFSLQAITEQNRPGRVLAAREAFDQQLRALLQAHSVTEDRVILVGFSQGSIMALDALASGRWQFAGVVAFSGRLATSALSPCTNTPALIVHGQDDDVIPWMESEAAALRLKGAGVHVETQFEPATGHTISGQGARRAATFIAQCLHD
>NZ_LN907827.1|WP_067426870.1|185594_186086_-|GNAT-family-N-acetyltransferase
MDITIRGREIDDAAACQRIHSYPEVYQWTLQLPFPTLDSWRKKFERQANDGAPGFVAEMDGQVVGEISLFINSNVRIRQTIGFGLVVDPNYGGRGVGQQLVAAAIDYAFNWFGATRLELEAFTDNQRAIRLYERMGFEQEGVRRRAALREGQYRDVTIMARLA
>NZ_LN907827.1|WP_067426872.1|186230_188063_+|ABC-transporter-ATP-binding-protein
MLYRRFERFINIFQDAPAGAPPDRVGAFYWFYLRQVWPSFVALLAVGLASSLIEVALFSYLSRIIDLVNHASPATLFSENWPILLWMAIVALILRPVVIGLHDLLVHQSINPSMTSMIRWQHHNYVLRQSLNFFQSDFSGRIAQRIMQTGNALRDSAVQLVDAIWHVVIYAVTSLVLFAQADWRLMIPLVLWIIGYSSALRYFVPRVKARSVVSSEARSKLMGTIVDGYTNIATIKLFAHSDLERQYAREAITEQTEKTQIASRMVSSMDVTLSILNGLLIVATSGLALWLWSQSLISVGAIALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLKTIAQPLSVQDVPQAKSLQVTRGNIRFYAVQFDYGGSRQVINNLNLDIKPGEKIGLIGPSGAGKSTLVNLLLRLYDINSGRILIDDQNIAQVSQESLRAQIGMITQDTSLLHRSIRENLLYGRPDASEQELALAIQRARADEFIPLLSDAQGRTGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVEAAIQESLETLMQGKTVIAIAHRLSTIAKMDRLIVMEHGQIVEMGSHQQLLAQQGLYARLWQHQTGGFVAEE
>NZ_LN907827.1|WP_067426875.1|188064_189192_-|N-acetyltransferase
MPLVRVTALSELAAADWDRLLPDDNPFLSHAFLSTLEESGSVSAATGWQPDHLLWQQDGQLLAALPGYRKSHSRGEYVFDQGWADACRRANLPYYPKWLGAIPFTPVGGARVLGDAAASAALLSALPEYLLQHQLSSAHINFTDAASNDLLASQPEWLLRLGCQYRWHNPGYRDFQDFLDTLMSRKRKQLRKEREQVAAADMAFVWYRGDELTESQWDFVYHCYVNTYAVRGQYPYLSREFFSLLAERMPQKIQVVIAERQTQPVAMAFSLVSGSTLYGRYWGCLAEFDRLHFETCFYQGMEFAITHGLREFDAGAQGEHKLIRGFAPQITSSWHYLLHPGLRDAVGDFLEEERAAVLQWADDALGALPYRRGEA
>NZ_LN907827.1|WP_067426878.1|189291_190686_-|MFS-transporter
MLKAPLAEKTSYVRIWILMLILLLSVVAYADRSILSISGSAIKQEFGLSPIQLGLILSAFSWAYVIGQIPGGLFLDRFGTKRVYGITLALWSLATIAMGFVGEFAQGLTGALALMFALRFLLGLIEAPSFPANARVTIMWFPKAERGRASSLFSSSQYFAVAIFSPLSGWLVSRFGWEWPFFVLGGIGVMTVFIWMWFMKEPRQHPGVSPAELRHIVDGGALVEIDSHAARTAPSRLSKATVKKLLNNRMLWCAYIGQYCIIALSYFFITWFPIYLVQSRGMNILDAGFATIAPALFGFLGGISGGYISDRLITQGWSISWARKTPYIVGMLMASTLVIAAVVSSNVWIIAIMSFAFFGKGVAAGAGTWAVISDTAPKEAVGLAGAIFNGIGNIAGILTPLLFGVIVALTGSYGIGLLFVAAHCIVAALLFLFVMGPIHRVGDAQDDAAAPRYADDKPQVTGHA
>NZ_LN907827.1|WP_067426881.1|190811_190991_+|hypothetical-protein
MASTTSEVAVRHRFNGNAKLLQGIVPEIETKGAMVVYVGDAAAHNKPADRRFFYPIAMK
>NZ_LN907827.1|WP_067426885.1|191045_192221_+|HD-GYP-domain-containing-protein
MIKLIPVSELLPGMFLHKLEVFWVHDSRVRNQMLLTDPRQIAAIKESGIEKVWIDLAKSVPHASANSETLRVPEITPGGFDSEVERARQIFQQGKGQIMAMFNEARLGTSLDLTSASALVDDIAGSVKRHPSALLSVARLKNHDDYTWLHSMAVCALMVSLAQKMGYDDKQTLRAGMGGLLHDIGKASVPLAILNKPGKLTDEEFIIMQQHPIMGAQMLMEAEADADIIDIALHHHEKFDGSGYPHRLAGKGISELSRMTAVCDVYDAITSMRPYKEGWNPAEAMHRMASWSGHFDRAIFHMFVKSLGIYPVGSLVRLASGRVALVTEVGNTSLLRPKVNIFYSLRTQREIPPEALDLADSFCCDSIIGPEDSNLWQRFNLSSVWRVGATA
>NZ_LN907827.1|WP_067426887.1|192217_192979_-|hypothetical-protein
MSTAIFMVLMVCGYWYTSRDLSSRFKIKRSFGWDVYFLVALYGCIFVVQGLIATGLIWLMLLVVSVVRNSFPHSQDVYYHYQMEFMNWSFLGIQAPVLITLIFTVLLCLYRSNWSGSARLDSSGRQKLYKQLSHTNGVEGLLYQCMEEGELAWVTLTSRRIYIGMIHTATFDSGNPNTNNVVLIPFLSGYRDKQTLDLVVEHNYSAWYDEHNISLTSEPNSAMSFRKVIMLDQIESLSLFDPASALALKIKPR

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Crispr_ID: NZ_LN907827_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN907827_2

250658-250766

Orphan

Consensus_repeat	Method
GGTTTTGACCTGGGTTTTGACCT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LN907827_2

>merge|NZ_LN907827|2|250658-250766|CRISPRCasFinder
GGTCTCAGCCTCGGTTTTAAACTTTCGATATTAATTGAGATTTTGACCTGGGTTTTGACCTGGGTTTTGACCTGGGTTTTGACCTGGGTTTTGACCTGGGTTTTGAACT

>NZ_LN907827|2|2|250658-250766|CRISPRCasFinder
GGTCTCAGCCTCGGTTTTAAACT	TTCGATATTAATTGA
GATTTTGACCTGGGTTTTGACCT	GGGTTTTGACCTGGGTTTTGACCTG
GGTTTTGACCTGGGTTTTGAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN907827.1\|WP_067435049.1\|259017_259995_-\|porphobilinogen-synthase	unknown	unknown	gnl\|CDD\|236450
NZ_LN907827.1\|WP_067427039.1\|260172_261678_-\|glycine-betaine/L-proline-transporter-ProP	unknown	unknown	gnl\|CDD\|182611
NZ_LN907827.1\|WP_067427013.1\|247538_248918_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|184426
NZ_LN907827.1\|WP_067427025.1\|254170_254455_+\|pyrroloquinoline-quinone-biosynthesis-peptide-chaperone-PqqD	unknown	unknown	gnl\|CDD\|179362
NZ_LN907827.1\|WP_067427033.1\|255582_257898_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqF	unknown	unknown	gnl\|CDD\|273978
NZ_LN907827.1\|WP_067427011.1\|246274_247537_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239491
NZ_LN907827.1\|WP_067426996.1\|239319_240225_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|173833
NZ_LN907827.1\|WP_067427030.1\|254417_255581_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqE	unknown	unknown	gnl\|CDD\|235397
NZ_LN907827.1\|WP_067427008.1\|244518_246021_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226229
NZ_LN907827.1\|WP_067427016.1\|249019_249898_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176133
NZ_LN907827.1\|WP_067427021.1\|252493_253426_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqB	unknown	unknown	gnl\|CDD\|235361
NZ_LN907827.1\|WP_067426993.1\|238220_239255_-\|type-2-isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235465
NZ_LN907827.1\|WP_071852545.1\|252363_252435_+\|pyrroloquinoline-quinone-precursor-peptide-PqqA	unknown	unknown	gnl\|CDD\|178960
NZ_LN907827.1\|WP_067427019.1\|251173_252214_+\|membrane-dipeptidase	unknown	unknown	gnl\|CDD\|366534
NZ_LN907827.1\|WP_157883833.1\|242780_242921_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN907827.1\|WP_067427004.1\|242931_244413_-\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917
NZ_LN907827.1\|WP_067435046.1\|240541_241108_-\|YtfJ-family-protein	unknown	unknown	gnl\|CDD\|225596
NZ_LN907827.1\|WP_067427036.1\|257882_258851_-\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_LN907827.1\|WP_067427022.1\|253415_254171_+\|pyrroloquinoline-quinone-synthase-PqqC	unknown	unknown	gnl\|CDD\|235353
NZ_LN907827.1\|WP_067426999.1\|241542_242511_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213364

Protein	Function_ID	Function_description	E-value
NZ_LN907827.1\|WP_067435049.1\|259017_259995_-\|porphobilinogen-synthase	gnl\|CDD\|236450	PRK09283, PRK09283, porphobilinogen synthase.	0
NZ_LN907827.1\|WP_067427039.1\|260172_261678_-\|glycine-betaine/L-proline-transporter-ProP	gnl\|CDD\|182611	PRK10642, PRK10642, proline/glycine betaine transporter ProP.	0
NZ_LN907827.1\|WP_067427013.1\|247538_248918_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|184426	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional.	0
NZ_LN907827.1\|WP_067427025.1\|254170_254455_+\|pyrroloquinoline-quinone-biosynthesis-peptide-chaperone-PqqD	gnl\|CDD\|179362	PRK02079, PRK02079, pyrroloquinoline quinone biosynthesis peptide chaperone PqqD.	9.93128e-42
NZ_LN907827.1\|WP_067427033.1\|255582_257898_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqF	gnl\|CDD\|273978	TIGR02110, Coenzyme_PQQ_synthesis_protein_F, coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	5.12457e-128
NZ_LN907827.1\|WP_067427011.1\|246274_247537_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239491	cd03397, PAP2_acid_phosphatase, PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.	3.84284e-59
NZ_LN907827.1\|WP_067426996.1\|239319_240225_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	1.62031e-58
NZ_LN907827.1\|WP_067427030.1\|254417_255581_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqE	gnl\|CDD\|235397	PRK05301, PRK05301, pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.	0
NZ_LN907827.1\|WP_067427008.1\|244518_246021_-\|GGDEF-domain-containing-protein	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	3.95811e-59
NZ_LN907827.1\|WP_067427016.1\|249019_249898_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176133	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold. YofA is a LysR-like transcriptional regulator of cell growth in Bacillus subtillis. YofA controls cell viability and the formation of constrictions during cell division. YofaA positively regulates expression of the cell division gene ftsW, and thus is essential for cell viability during stationary-phase growth of Bacillus substilis. YofA shows significant homology to SoxR from Arthrobacter sp. TE1826. SoxR is a negative regulator for the sarcosine oxidase gene soxA. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine, which is involved in the metabolism of creatine and choline. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.59245e-87
NZ_LN907827.1\|WP_067427021.1\|252493_253426_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqB	gnl\|CDD\|235361	PRK05184, PRK05184, pyrroloquinoline quinone biosynthesis protein PqqB; Provisional.	0
NZ_LN907827.1\|WP_067426993.1\|238220_239255_-\|type-2-isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235465	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional.	4.67904e-163
NZ_LN907827.1\|WP_071852545.1\|252363_252435_+\|pyrroloquinoline-quinone-precursor-peptide-PqqA	gnl\|CDD\|178960	PRK00284, pqqA, pyrroloquinoline quinone precursor peptide PqqA.	1.47449e-07
NZ_LN907827.1\|WP_067427019.1\|251173_252214_+\|membrane-dipeptidase	gnl\|CDD\|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	2.64946e-100
NZ_LN907827.1\|WP_067427004.1\|242931_244413_-\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.19575e-148
NZ_LN907827.1\|WP_067435046.1\|240541_241108_-\|YtfJ-family-protein	gnl\|CDD\|225596	COG3054, COG3054, Predicted transcriptional regulator [General function prediction only].	1.08065e-82
NZ_LN907827.1\|WP_067427036.1\|257882_258851_-\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.10469e-45
NZ_LN907827.1\|WP_067427022.1\|253415_254171_+\|pyrroloquinoline-quinone-synthase-PqqC	gnl\|CDD\|235353	PRK05157, PRK05157, pyrroloquinoline quinone biosynthesis protein PqqC; Provisional.	1.70268e-168
NZ_LN907827.1\|WP_067426999.1\|241542_242511_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213364	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily. This bacterial subfamily belongs to the Thermotoga maritima CorA (TmCorA)-like family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subfamily includes the Mg2+ transporter Mycobacterium tuberculosis CorA (which also transports Co2+). Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	2.6334e-153

>NZ_LN907827.1|WP_067427016.1|249019_249898_+|LysR-family-transcriptional-regulator
MQLSQLEMFRAVAATGSISAAAEAVHRVPSNVTTRIKQLEAELGVALFIRENQRLRLSPAGRHFLDYNNRILDLVDEARLAVSGDRPAGLFALGSLESTAAVRIPPLLACYHHHYPQVELALSTGPSGDMLDRVLEGSLEAAFVDGPILHPVLEGVPVFREEMVLVATQQHPAIACAEDVNGENLFAFRDNCSYRRHFESWFRDGNAMPGKIYPVESYHGMLACVTAGSGIALMPRSMLESMPGSGTVSAWPLAENYRYLDTWLVWRRGPRSINLNEFIGLLPGGEGEACQG
>NZ_LN907827.1|WP_067427013.1|247538_248918_-|aldehyde-dehydrogenase-family-protein
MQNSISTLNPATGETLAVYPFASASELEAALAQSSSAFSLWKNVPIADRASYLVRFAQVLRQYRDVLADAITQEMGKPVTQARAEVEKSAALCDWYASEGPAMLAPEPTQVDNGHAEIAYRPLGTILAVMPWNFPVWQVLRGAVPAMLAGNTFLLKPAPNVAGSTQLLLQAAAEAGLPAGVFSVINATNDGVSAAIKDDRIAAVTLTGSVRAGTAIASQAGAALKKSVMELGGADAFIVLKDANLDEAVRAALLGRFQNGGQVCAAAKRLIVEEAILPAFTETFVAMAREMKIGDPTDEATYIGPMARYDLRDELDAQVQATLSEGATLLMGGEKIAGAGNYYAPTVLSNVTPEMTAFREELFGPVASIIAARDADHAVTLANDSDFGLSATIYTADTALAEAMTVQLECGGVFINGISASDPRVAFGGVKKSGYGRELSHFGLREFCNAQTVWRNRKG
>NZ_LN907827.1|WP_067427011.1|246274_247537_+|phosphatase-PAP2-family-protein
MRLTLSVIALSLFASTLADAAEPQWSQIHATAVNTTADLNPNFAAREAVIQQQLIAALRGNASSLQRSELETARQSSVQADTAWLQASGYDFHKKENQQAGIALLSQFSAQPKAVMTANLDTVESINLNATGGQRRGALIDAEGQNFLYFLADAMGPDLGKAFLTAYNKGELSKAAALIKASEVSTSAAKKHFNYPRPFLVAGNSIHNVPDDAVVKDNQPYRADGGSFPSGHTNTGYTDALLMAEMLPERFVPLLDRGARYGYSRIVLGVHYPLDVIGSRMAAERNVAHFMNDAAYRTLFEQAKQELRGALEKECGMSLAACARTTGDADPYAAPQMRQFYRFTMTYGLPRQRTQQSSVQVPAGAEVLLEAPLPQLNAAQRRQLMVSSALAAGYPLSGDAEQSFWQRLNLHDAVVSASKR
>NZ_LN907827.1|WP_067427008.1|244518_246021_-|GGDEF-domain-containing-protein
MPLFLLLVSISVVLISGGALWQSWQHELQENERLVKNQSLALSRQAQDTFLQVQITLQEIARNADDIFSSPGHYAGTQGLLARQKALLPQLNGLFVFDANGISVANSAPGPLPAYSNGDRDYFSWHRRHDNQQMHIGHVIRSRSNNEPVIPVSLRLDDAEGHFRGVALGTVRVDYFRQYYDYFEIGEHDVLGLTHRDATMLYVRPFADRLTNHSMAHTPLYQKLLKVSPTGSGTWRSPIDGITRIFGYAMVPHYPLVAAVGIDRDALRKAWLRTNLGIICLNLLMLMLVMLFGLLLLRQLRLMLENQAELLRARDELTYANHRLQDLALIDSLTGLANRRQFDIYLEQCIERAATTGVPMSLIMCDIDYFKRYNDTRGHVAGDACLRRIADILKSLAQRNGDVVARYGGEEFAFVLPATDASAALALAQRILAAVRAAALPHASTELAEKIVTLSIGVSTFSIGSNADSLVHDADQALYAAKRNGRNQIVTRSPTVAAQR
>NZ_LN907827.1|WP_067427004.1|242931_244413_-|sugar-porter-family-MFS-transporter
MLHAICVKIRGIAVSEINNNNPASQPKSATQSVEPLVKVIAVVATLGGLLFGYDTGVIAGALLFMKHDLHLTPATTGMVTSFLILGSAFGAISAGRMADRLGRRKIILIMAVVFLTGSLGCAMAPNVELMITFRFILGLAVGGAAAIVPVYIAEIVPANRRWQFVTLQEMMIVSGQLIAYVSNATINEIWGGEETWRWMLGVACVPAVVLWVGMLFLPDTPRWYAMHGRFKEARDVLKRTRDSRYVEREFNNIRSAVKPKREKSAQRNRTISVWMKRLVALGIGIAMIQQLSGVNTIMFYAPTMLQAAGMGTNASLIATIANGVISVLMTFVGIMLLSRFGRRPLLLTGQIGCTCTLVAIGLVTLLMPETVNGDPNMIRCWLVLAGMLVFLSFQQAALSPVTWLLLSEIFPLSIRGRATGLSVFAMQITNFTIALLFPTMLDHFGLPACFLSFAAVGIAGGIFVILCAPETKGKSLEQLEKHFREELQPSARV
>NZ_LN907827.1|WP_157883833.1|242780_242921_+|hypothetical-protein
MMAQYQQARAGQKISLLQTLAAGRLTVVKTITAEPKLCRQVIRQAN
>NZ_LN907827.1|WP_067426999.1|241542_242511_-|magnesium/cobalt-transporter-CorA
MVVNSVVYRAGKRGEEIKIEDISEAIHEPDNYVWLGLYEPDEPFMQKIQQEFGLHDLAIEDALTAHQRPKIEQYGDSVFIVLKTAQKNDRDEIHFGETHIFAGKNFLITVRHGASETYAPVRKRAEENQAMMAKGPAYAMYCIIDFIVDHYLEVTASLSDRINEMETTMFSSEFDRSAVQNVYMLRRHLLALRNAAQPVDDICQQLIRLHEELVPKPLRAYLRDVQDHARHAVTDAEDMREILTSAMQVNLALVSVQQNEVVKKISGWGGILVVPTVVFSMYGMNFDHMPELHLLYGYPAVVIFTLLACFCLYRGLKRSGWL
>NZ_LN907827.1|WP_067435046.1|240541_241108_-|YtfJ-family-protein
MLFSVRSVRSLAVATLLLPFFASAHNFVVGERVSPMGIADRGELLEQQGKLSYQRWNSAQLTGKVRVVLYLAGRMSAKDENNAVIEAISAAKLPHDRYQTTTIINTDDAIPGSAIFVRNSIESSKKTSPWAQFVVDSLGAGQRAWQLKPGGSTVVVLDKTGAVRFAQEGALSPQQVQEVTALLHQLVS
>NZ_LN907827.1|WP_067426996.1|239319_240225_-|polyprenyl-synthetase-family-protein
MTAYAEKLLSQESELRALREAIQVRLDELLPAGGERDMVRAAMREGALAPGKRIRPLLLILAARDLGCETPHQGLLDLACAIEMIHAASLILDDIPCMDDALLRRGRPTIHRQFGENVAILAAVALLSHAFGVVAAAEGLSSQCRNQAVAELSGAVGLQGLVQGQFLDLNEGSNARSPEAIATANDLKTSVLFGATLQMAAIAAEAPLTVRQKLRCFAEDLGQAFQLLDDLADCQSGTGKDLNKDHGKSTLVAMLGAEAVHQRLHEHLRNADEHFAYACRDGVATRQFMHAWFNQQLASFR
>NZ_LN907827.1|WP_067426993.1|238220_239255_-|type-2-isopentenyl-diphosphate-Delta-isomerase
MKDPDLLQRKNDHLDIVLNPNRAVKQTTTGFERWRFEHCALPELNLDAIDLSTSLCGRAMQAPILISSMTGGANRARDINRHLAEAAQMLGLAMGVGSQRVAIEGDMNWGLDSELRKIAPDIPLLANLGAAQLLGPHGISYARQAVAMIDADALIVHLNPLQEALQNGGDRDWRGVLTAIEQAVTTLPVPVIIKEVGAGLSVAVAERLAAVGVTMLDVAGAGGTSWAAVEGERADSARRRAVAMAFTGWGIPTADALCAIRARLPEMPLIASGGIANGIDAAKAIRLGANLVGQAAAVLGSATTSTDAVTEHFQVVIDQLRVACFCTGSENLAALKQASLVPVG
>NZ_LN907827.1|WP_067427019.1|251173_252214_+|membrane-dipeptidase
MSDIYPFFDGHNDALLRLWINPAQDPAAAFIAGTPDGHLDLPRARQGRLAGGLFALFVPPVSYIAHIRQQTGEAIAAQHQPAQIVREQAAILQAIAAQSHGQATICRTAGEIEQAMHSGALAMVMHLEGGDALDSEGELLDELCAQGLRSLGPFWNLPNRFGEGVNGNFPASPDTGAGLTAEGIALIKTCNQRRILIDVSHMNEKAFWDTARLSDAPLVATHSNAHQLCPQPRNLTDRQLDAIRDSDGLVGVNFGTAFLRADGKRDGKTAVAEIVKHLSYLADRIGIERVALGSDFDGVNVPDALHDVAGLPRLADALAAAGFSAACQQKMAWRNWLRVLKQTWGE
>NZ_LN907827.1|WP_071852545.1|252363_252435_+|pyrroloquinoline-quinone-precursor-peptide-PqqA
MWIKPEFTDLRLGLEVTLYISNR
>NZ_LN907827.1|WP_067427021.1|252493_253426_+|pyrroloquinoline-quinone-biosynthesis-protein-PqqB
MLIKVLGSAAGGGFPQWNCNCHNCQGLRQGTLKSTARTQSSIAVSDNGKEWVLCNASPDISHQIAATPEMRTPDVLRGTAIGSIILTDSQIDHCAGLLNLREGCPHQVWCTPEVHADLTSGFPIFTMLSHWNGGLTHHPIAPLEPFTVAVCPALRFTALPILSNAPPYSPYRGNPLPGHNIALFIENIESGKSLLYAPGLGEPDDALLGWLHKADCLLIDGTLWQDNELANTGVGRNTGKDMGHLALAEEQGLVKLLSTLPAERKILIHINNTNPILDEDSAERHALTREGIEVSWDGMTINLQDNHHVS
>NZ_LN907827.1|WP_067427022.1|253415_254171_+|pyrroloquinoline-quinone-synthase-PqqC
MSHEKAMTPHEFEQALRAKGAYYHIHHPYHIAMHNGQATREQIQGWVANRFYYQTSIPLKDAAIMANCPDPATRRKWVQRILDHDGQGDGEGGIEAWLRLGEAVGLSRELLLSERLVLPGVRFAVDAYVNFARRACWQEAACSSLTELFAPQIHQSRLDSWPQHYPWIEAEGYGYFRSRLSQANRDVEHGLALALEFCDTVEKQQRMLQILQFKLDILWSLLDAMTMAYTLHRPPYHCVTDQPVWHHQRFL
>NZ_LN907827.1|WP_067427025.1|254170_254455_+|pyrroloquinoline-quinone-biosynthesis-peptide-chaperone-PqqD
MVVTTQQVPAFKRGYRLQWEAAQESHVMLYPEGMATLNETAAAILQLVDGKSSVADIVATLNARFPDAGGVDNDVIEFFGRAYEQKWIVLRDGE
>NZ_LN907827.1|WP_067427030.1|254417_255581_+|pyrroloquinoline-quinone-biosynthesis-protein-PqqE
MNKNGSSCVTANKPAVNPPLWLLAELTYRCPLQCPYCSNPLDFAQQENELTTEQWITVFRQARAMGSVQLGFSGGEPLVRKDLPELIAAARDLGFYTNLITSGIGLTEKKLQTFGDAGLDHIQISFQASDETLNAALAGSKKAFQQKLAMAKAVKAQGYPMVLNFVLHRHNIDQIDKIIDLCIELEADDVELATCQFYGWAHINREGLLPSIEQIARAEATVKRYRERMAASGNLTNLLFVTPDYYESRPKGCMGGWGAIFLSVTPDGTALPCHSARQLPVKFPSVLEHDLQHIWYESFGFNRYRGYDWMPEPCRSCPEKEQDFGGCRCQAFMLTGDADNADPVCDKSAHHGKILQAREEANCSSLRVDQLRFRNRVNSNLIFKAGA
>NZ_LN907827.1|WP_067427033.1|255582_257898_+|pyrroloquinoline-quinone-biosynthesis-protein-PqqF
MQRASERLANGLRIELISTPAAQQAAALISVECGSFHEPIPGLAHLLEHLLFADSTHFRHQQRLMPWVQGQQGQLNASTHACRSAFFFEVAADQLEAGVARLTDMMAHPLLQQSDIRREAQVIDAECQLLQKESRTQAAAALTSMLAAPAEAQRFQVGNAATFGDDLPALQAALRQLHQRYYVAGNMTLWLQGPHSLETLRQLAQRYGTLLPAGQAETPPLCLQASGASQRLRSASSALRLGWIVADADATTFSLLRQMIVDEASGSLLAQLRDRQLCQAIALDLTIVTPQTTLIVVDFSLLNATDDAATQVESLFYRWVQQLMQQPDAVLQHYAALDRTVFSALSPLRQLRARVLDCVPPASIDEAFLTRWQALLHQCQAASHLRQLSGENITGAPTLCQGFALSLTTLPLSAVPMADADAHFVFFSAPQNRATTETPGGVPVALAHQPQNGEEVTLVLHPAPETGLANCGGEALRMALRTLAGDARHAGVNLCIEPEQGVWLLSLRGQGDALLPVLDALSARLLAMQEPHWQAGRAPAELAVRQAHDGIAIRALLAALPEALQPQAADVSDSWSGMLVGGDAWLHQAIARRLSPLPGWHHPVHPARHAAVARAVATSSRDRAILLFCPVPASARWQLLAQIYEPHFFQQLRVERQVGYVVSCRFHYCAGESGILFALQSPNWEYAALWQAIEDFLHAMTPLLGEVNAQQLDEHYQALMARAEESVRLRWLAAWRGDVERENRVTPDDLLAAHRQLQQLTGWRLSNQPVA
>NZ_LN907827.1|WP_067427036.1|257882_258851_-|sensor-domain-containing-diguanylate-cyclase
MKTPEIPADEDQRLREVRALNMLDTPAEERFDRLTRLAKRLFDVQISYVGLLEDDRQWFKSVDGMAFTGTARAVSFCGHTILQNEALVIEDAHADPRFHDNPLVTANPHIRFYAGCPLRTPNGAKVGTFCIIDDKPRTFSAEDRISLHDLASMAEAELLAFQTATSDELTKITNRRGFKTLSEMLLTESVVQRQYACLAFLDLNKFKQINDTFGHQEGDRALVDFAEALKLSFRRSDLFARLGGDEFVVLLSDTRQSDAERRVTAFRQQLEEVIARLDRPYQLSFSSGIVEFDPAAPLTLDQLLTHSDAIMYQNKKRHHATG
>NZ_LN907827.1|WP_067435049.1|259017_259995_-|porphobilinogen-synthase
MSEYSPVLRPRRLRKTPSLRAMFQESELSLNDLALPIFVEEGVDDYKAIEAMPGVMRIPEKRLAYEIERIAKAGIRSVMTFGISHHTDATGSDAWQENGLVARMSRICKETVPEMIVMSDTCFCEYTSHGHCGVLCGHGVDNDATLINLGKQAVVAAHAGADFIAPSAAMDGQVAAIRQALDAAGFTDTAIMSYSTKFASSFYGPFREAAGTALKGDRKTYQMNPMNRREAIRESLIDAAEGADSLMVKPAGAYLDILRDIRERSDLPLAAYQVSGEYAMIKFAAQAGAIDERNVVLESLGAIKRAGADVIFSYFALDLAENKVL
>NZ_LN907827.1|WP_067427039.1|260172_261678_-|glycine-betaine/L-proline-transporter-ProP
MKLRRKRVKPIALDDVTIIDDARLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSLQMIAALGTFSVPFLIRPLGGLFFGRLGDKYGRQKILSITIIIMSISTFCIGLIPSYASIGIWAPILLLLAKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGIVVLITAVIGEARFLEWGWRLPFFLALPLGMIGLYLRHALEETPAFQQHVDKLEQGDRDGLREGPKVSFKEIATKHWKSLLSCIGLVIATNVTYYMLLTYMPSYLAHNLHYSEDHGVLIIIAIMLGMLFVQPVMGLLSDRFGRRPFVIIGSISLLIFAIPAFMLINSNVLGLIFAGLLILAVILNSFTGVMASSLPAMFPTHIRYSALASAFNISVLVAGLTPTLAAWLVETTNNLYMPAYYLMVVAVIGLITGITMKETANKPLKGATPAASDIGEAREILQEHHDNIEQKIEDIDSEIKRLESQRSNLIDQHPRINE

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Crispr_ID: NZ_LN907827_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN907827_3

1781814-1781902

Orphan

Consensus_repeat	Method
GAAAAAGCATCTGAAGCAGGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN907827_3

>merge|NZ_LN907827|3|1781814-1781902|CRISPRCasFinder
GAAAAAGCATCTGAAGCAGGAAAAAAAGGCGGTCAAAACAGCGGTGGTAATTTCGCTAACGACCGTGAAAAAGCATCAGAAGCAGGAAA

>NZ_LN907827|3|3|1781814-1781902|CRISPRCasFinder
GAAAAAGCATCTGAAGCAGGAAA	AAAAGGCGGTCAAAACAGCGGTGGTAATTTCGCTAACGACCGT
GAAAAAGCATCAGAAGCAGGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN907827.1\|WP_067430208.1\|1776549_1777386_-\|5-dehydro-4-deoxy-D-glucuronate-isomerase	unknown	unknown	gnl\|CDD\|179169
NZ_LN907827.1\|WP_157883913.1\|1787628_1787673_+\|pheST-operon-leader-peptide-PheM	unknown	unknown	unknown
NZ_LN907827.1\|WP_067430201.1\|1775048_1775642_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|183256
NZ_LN907827.1\|WP_067430223.1\|1780569_1781331_+\|DUF481-domain-containing-protein	unknown	unknown	gnl\|CDD\|225679
NZ_LN907827.1\|WP_071852499.1\|1782653_1782986_-\|four-helix-bundle-copper-binding-protein	unknown	unknown	gnl\|CDD\|153434
NZ_LN907827.1\|WP_067430235.1\|1784277_1786206_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_LN907827.1\|WP_067430217.1\|1778925_1779819_-\|fructosamine-kinase-family-protein	unknown	unknown	gnl\|CDD\|367711
NZ_LN907827.1\|WP_004157374.1\|1786853_1787051_+\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NZ_LN907827.1\|WP_067430246.1\|1788826_1791214_+\|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
NZ_LN907827.1\|WP_017802142.1\|1791218_1791518_+\|integration-host-factor-subunit-alpha	unknown	unknown	gnl\|CDD\|178961
NZ_LN907827.1\|WP_067430220.1\|1779910_1780201_-\|type-V-toxin-antitoxin-system-endoribonuclease-antitoxin-GhoS	unknown	unknown	gnl\|CDD\|371368
NZ_LN907827.1\|WP_067430198.1\|1773486_1774878_-\|L-cystine-transporter	unknown	unknown	gnl\|CDD\|224736
NZ_LN907827.1\|WP_067430194.1\|1771013_1773278_-\|catalase-HPII	unknown	unknown	gnl\|CDD\|236886
NZ_LN907827.1\|WP_067430214.1\|1778383_1778920_+\|YniB-family-protein	unknown	unknown	gnl\|CDD\|372875
NZ_LN907827.1\|WP_067430238.1\|1786209_1786761_+\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
NZ_LN907827.1\|WP_067430241.1\|1787154_1787511_+\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
NZ_LN907827.1\|WP_067430205.1\|1775756_1776518_-\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD	unknown	unknown	gnl\|CDD\|181605
NZ_LN907827.1\|WP_067430244.1\|1787828_1788812_+\|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
NZ_LN907827.1\|WP_067430232.1\|1783152_1783716_-\|diguanylate-cyclase	unknown	unknown	unknown
NZ_LN907827.1\|WP_067430211.1\|1777557_1778226_-\|hexitol-phosphatase-HxpB	unknown	unknown	gnl\|CDD\|236770

Protein	Function_ID	Function_description	E-value
NZ_LN907827.1\|WP_067430208.1\|1776549_1777386_-\|5-dehydro-4-deoxy-D-glucuronate-isomerase	gnl\|CDD\|179169	PRK00924, PRK00924, 5-keto-4-deoxyuronate isomerase; Provisional.	0
NZ_LN907827.1\|WP_067430201.1\|1775048_1775642_-\|metal-dependent-hydrolase	gnl\|CDD\|183256	PRK11648, PRK11648, metal-dependent hydrolase.	2.01481e-121
NZ_LN907827.1\|WP_067430223.1\|1780569_1781331_+\|DUF481-domain-containing-protein	gnl\|CDD\|225679	COG3137, COG3137, Putative salt-induced outer membrane protein [Cell envelope biogenesis, outer membrane].	5.80057e-102
NZ_LN907827.1\|WP_071852499.1\|1782653_1782986_-\|four-helix-bundle-copper-binding-protein	gnl\|CDD\|153434	cd08026, DUF326, Cysteine-rich 4 helical bundle widely conserved in bacteria. This functionally uncharacterized protein forms a 4-helical bundle with a bromodomain-like topology. It is present in major bacterial lineages and contains highly conserved cysteines in a repeated pattern, whose sidechains appear buried. Some family members have been (mis)annotated as putative ferredoxins.	3.10988e-27
NZ_LN907827.1\|WP_067430235.1\|1784277_1786206_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_LN907827.1\|WP_067430217.1\|1778925_1779819_-\|fructosamine-kinase-family-protein	gnl\|CDD\|367711	pfam03881, Fructosamin_kin, Fructosamine kinase. This family includes eukaryotic fructosamine-3-kinase enzymes. The family also includes bacterial members that have not been characterized but probably have a similar or identical function.	4.90236e-150
NZ_LN907827.1\|WP_004157374.1\|1786853_1787051_+\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	4.87076e-23
NZ_LN907827.1\|WP_067430246.1\|1788826_1791214_+\|phenylalanine--tRNA-ligase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
NZ_LN907827.1\|WP_017802142.1\|1791218_1791518_+\|integration-host-factor-subunit-alpha	gnl\|CDD\|178961	PRK00285, ihfA, integration host factor subunit alpha; Reviewed.	8.95796e-64
NZ_LN907827.1\|WP_067430220.1\|1779910_1780201_-\|type-V-toxin-antitoxin-system-endoribonuclease-antitoxin-GhoS	gnl\|CDD\|371368	pfam11080, GhoS, Endoribonuclease GhoS. GhoS is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. GhoT is inhibited by antitoxin GhoS, which specifically cleaves its mRNA.	1.01307e-19
NZ_LN907827.1\|WP_067430198.1\|1773486_1774878_-\|L-cystine-transporter	gnl\|CDD\|224736	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only].	0
NZ_LN907827.1\|WP_067430194.1\|1771013_1773278_-\|catalase-HPII	gnl\|CDD\|236886	PRK11249, katE, hydroperoxidase II; Provisional.	0
NZ_LN907827.1\|WP_067430214.1\|1778383_1778920_+\|YniB-family-protein	gnl\|CDD\|372875	pfam14002, YniB, YniB-like protein. The YniB-like protein family includes the E. coli YniB protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 180 amino acids in length. This family of proteins are integral membrane proteins.	1.7195e-90
NZ_LN907827.1\|WP_067430238.1\|1786209_1786761_+\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	1.59138e-96
NZ_LN907827.1\|WP_067430241.1\|1787154_1787511_+\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	7.2565e-68
NZ_LN907827.1\|WP_067430205.1\|1775756_1776518_-\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD	gnl\|CDD\|181605	PRK08993, PRK08993, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD.	8.29566e-157
NZ_LN907827.1\|WP_067430244.1\|1787828_1788812_+\|phenylalanine--tRNA-ligase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_LN907827.1\|WP_067430211.1\|1777557_1778226_-\|hexitol-phosphatase-HxpB	gnl\|CDD\|236770	PRK10826, PRK10826, hexitol phosphatase HxpB.	2.14504e-150

>NZ_LN907827.1|WP_067430223.1|1780569_1781331_+|DUF481-domain-containing-protein
MKALTKLSAALLLPLGAFCHQAMADNNVFTSMDDPSTAKKPFDGSAAAGYLAQTGNTTSSSLTAQTNMTWFQSRTAYSLWGNAANTSANDERSSETYNIGGRSRYNMTNYDYLFGQASWLSDRLNGYDSRDVLTAGYGRQVLNGPVHSLRMEFGPGVRYDDFHDGGHETKALGYGALSYQWQLTDTTKFVQGVSVLSSFGEDTTVNSETGLQVAINEHFALKLAYNVTWNNNPPESAPDRTDTKTSVMLSYAM
>NZ_LN907827.1|WP_067430220.1|1779910_1780201_-|type-V-toxin-antitoxin-system-endoribonuclease-antitoxin-GhoS
MSPTGLQHFVVTLHYQEESLGDIQQLTSAMTGSGFTTSLHDEHGKSHELGLNSFGIITAKTAEELQQEIIAASASLPADKLRVDVQTLDDFLQHAP
>NZ_LN907827.1|WP_067430217.1|1778925_1779819_-|fructosamine-kinase-family-protein
MWSAIGRLLSEQLGSADIGQKTSLPGGDVHPAWHIRYGEHDVFVKCNQRDMLDLFTWEAAQLELLARSQTVRVPAVYGVGSDRDVSFLLLEYIPLTPLDSTSALELGQQLARLHQWSEQAHFGFDFDNNITTTPQPNSWLRRWSVFFAEQRIGWQLQLAAEKGIQYGNIDLIISCVQRALATHQPQPSLLHGDLWPTNCGGSAEGPWIYDPACYWGDRECDLAMLSWYTALPPQIYEGYQSIWPLPAGFSQRQPIYQLYYLLNRANVFGGEWLLESQRAIGELLDADEWMESQASPA
>NZ_LN907827.1|WP_067430214.1|1778383_1778920_+|YniB-family-protein
MTYQQAGRIGILKRVVGWIIFLPALISTIISLLSFMFRHSEKQPGIDAVMLDFVHVMIDMIRFNTGFLHFFWQNSPVPDFHGGANLGFWFIYILIFVGLALTASGARIWRQSRYIKEGIEDQLIMEKAKGEEGRSRQQLEARINVPHHTIFLQIFPLYILPIIIAIAGYFILSLLGFI
>NZ_LN907827.1|WP_067430211.1|1777557_1778226_-|hexitol-phosphatase-HxpB
MSYSRPVLAAIFDMDGLLIDSEPLWDQAESDVFSALGIDLSRRAELPDTLGLRIDQVVRMWYDAQPWNGPDQAEVTQRIITRALSLVEAQRPLLPGVEHALKLCQAEGLAIGLASASPLFMLERVLEMFNLRHYFSALASAEMLPYSKPHPQVYLDAAAKLGVDPLNCVTLEDSFNGMIATRAARMRSIVVPAAENRDDARWHVAHVQLRSLAELTALHLRG
>NZ_LN907827.1|WP_067430208.1|1776549_1777386_-|5-dehydro-4-deoxy-D-glucuronate-isomerase
MQVRQSIHSDHAKQLDTAALRREFLIETLFTADTYTMTYSHTDRIIIGGIMPVTQSVTIGSEVGKQLGVSYFLERRELGVINVGGPGVIDVDGTQWEIGNQEALYVGMGRQSVIFSSNDAARPAKFYYNSAPAHRTWPDKKITLAEASSTTLGDAATSNRRTINKFIVPDVLPTCQLTMGLTRLEEGSLWNTMPCHTHERRMEVYFYFDMDEETAVFHMMGQPQETRHLLVHNEQAVISPSWSIHAGVGTKRYTFIWGMVGENQVFDDMDPVQIGDLR
>NZ_LN907827.1|WP_067430205.1|1775756_1776518_-|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD
MILNAFNLEGKVALITGCNTGLGQGMAIGLAQAGCDIIGVNRSGPDDTQALVEATGRAFHGIDADLIDTRVVPDVVQQAVSAFGRIDILINNAGIIRREDALNFTEADWDDVMNINSKTLFFLSQAVAKQFIAQGGGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRLMANEWAKHNINVNAIAPGYMATNNTAQIRDDEGRSQEILGRIPAGRWGLPDDMMGPVVFLASSASDYVQGYTLAVDGGWLAR
>NZ_LN907827.1|WP_067430201.1|1775048_1775642_-|metal-dependent-hydrolase
MTAEGHIIFAVASAIFAKRAELTPVLAQGDWWHIISATLLTCLLPDIDHPRSLLGQRLRWLSHPIARIFGHRGFTHSLLAVLGGLWLFQVNIPQGWIIPADVLQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPVLRSSQNGNQLERVFCYVLVGLALWFPPGSLPFGAEGWTAQIINQAQSGFNQLIKQVPGH
>NZ_LN907827.1|WP_067430198.1|1773486_1774878_-|L-cystine-transporter
MNIALILNIVIFVALLLLLAKIGRNSWSLSKRVLTGLVIGVVFGLGLHAVYGENDPVITESISWFNIVGNGYVQLLQMIVMPLVFVSILSAVARLHNASSLGKISVLTIGVLLVTTAISALVGVLVTGLFDLNATGLVQGAKETARLAAIQTNYAGKVADLTVPQLLLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALHLLKDDKEKGERVLQAIDTLQSWVMKLVRLIMKLTPYGVLALMTKVVGTSNLQDIMKLGSFVIASYLGLAIMFGVHALLLSANGINPLRFFRKVWPVITFAFTSRSSAATIPLSVEAQTRRLGVPESIASFSASFGATIGQNGCAGLYPTMLAVMVAPTVGINPFDPLWIATLVGIVTLSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISIEPLIDMGRTALNVNGSMTAGSLTSRWLGMTDRRVLESDERPELAQR
>NZ_LN907827.1|WP_067430194.1|1771013_1773278_-|catalase-HPII
MSKETHKKELTHTAPFTGTDSVQPARDSLAPADGSHQPSAQPTPPGKEPTAPGSLKAPDTHNAKLDQLEPNRKNGTDAPLTTNQGTRIANDQNSLRAGTRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYSSLKEITKADFLSDPEKITPVFVRFSTVQGGNGSADTVRDIRGFATKFYTDEGVFDLVGNNTPVFFIQDAHKFPDFVHAVKPEPHNEIPQGQSAHDTFWDYVSLQPETLHNVVWAMSDRGLPRSYRTMEGFGIHTFRLINADGKATFVRFHWKPVAGKASLLWDESQKLTGRDPDFHRRDLWESIEAGDFPEYELGLQLIPEEDEFKFDFDLLDATKLIPEELVPVQLVGKMVLNRNPDNFFAETEQVAFHPGHIVPGMDFSNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPVCPYHNFQRQGMHRMDIDTNPANYEPNSINDNWPRETPPAPSGGGFESYQERVEGHKVRERSPSFGEYYSQPRLFWLSQLPFEQQHIIGAFSFELSKVGRAYIRERVVDHLLRIDVQLASGVAENLGLALTDEQLNTTPPQPVNGLSKAESLSLYAQPGGSIKGRQVALLISDGVKAADVLAILQALKAEGVHAKLLASHMGQVRADDGSALPIDATFAGLPSLTFDAVIVPDGNIDALLLSGDARYFLLEAYKHLKVIGLSGDARRFKAQFSVGDDEAEEGLVEDAKAEGALMSDFLTAMAAHRVWSRSQKALSVPA
>NZ_LN907827.1|WP_071852499.1|1782653_1782986_-|four-helix-bundle-copper-binding-protein
MNEQFQRCIEACYLCATACDNCATSCLQEEHVEMMRDCIRYDIQCAAICRVSAQLMAQKSEYAAQLCKLCAEICDRCGDECGQHEHDHCQHCARACHQCAEACRNMAGAA
>NZ_LN907827.1|WP_067430232.1|1783152_1783716_-|diguanylate-cyclase
MPSSDPQMFLLLWFVLPVWLIAGFADWLCHRATHIETTAGIKETWIHLLMFLQMGIPMLSALFLEVNALIIGFMIVLFFCHEATALWDVSYAVTARKVSPIEQHVHSFLEMVPLMALLLVISRHWPQFLALFGAGPESARFDLHLRPDPLPVGYIASVLMGILLLEVLPYLEEYRRGKKAKGIAQGK
>NZ_LN907827.1|WP_067430235.1|1784277_1786206_+|threonine--tRNA-ligase
MPVITLPDGSQRTYDRVVSVMDIAQDIGPGLAKACIAGRVNGELVDAVDPIAEDANVAIITAKDEAGMEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDHTLTQEDIELLEKRMHELAEKNYDVIKKRVSWQEARDEFASRGESYKTTILDENISRDDRPGLYHHEEYVDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSSNKMLQRIYGTAWADKKQLAAYLQRLEEASKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEDQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDELWDRAEADLAAALKENDIPFDYQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFSLPSRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQAVIMNITDGQAEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVNVLIEKLQQEIRSRNLRQLEE
>NZ_LN907827.1|WP_067430238.1|1786209_1786761_+|translation-initiation-factor-IF-3
MKGGKRVQPTRPNRINGEIRATEVRLTGVDGEPIGIVSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDLDLAIVESFPSKIEGRQMIMVLAPKKKQ
>NZ_LN907827.1|WP_004157374.1|1786853_1787051_+|50S-ribosomal-protein-L35
MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKGMVSKGDLGLVIACLPYA
>NZ_LN907827.1|WP_067430241.1|1787154_1787511_+|50S-ribosomal-protein-L20
MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGLSYSRFINGLKKASIEIDRKILADIAVFDKVTFTALVEKAKSALA
>NZ_LN907827.1|WP_157883913.1|1787628_1787673_+|pheST-operon-leader-peptide-PheM
MHAAVFRFFFYFST
>NZ_LN907827.1|WP_067430244.1|1787828_1788812_+|phenylalanine--tRNA-ligase-subunit-alpha
MSHLNELVARATAAIEDAQDAAALDNVRVEYLGKKGHLTLQMSTLRELPAEERPAAGAVINDAKQKVQDVLNARKESIDSAAMNARLAAETIDVSLPGRRVENGGLHPVTRTIDRIETFFGELGFAVVTGPEIEDDYHNFDALNIPGHHPARADHDTFWFDATRLLRTQTSGVQIRTMKNQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDKNISFTNLKGTLHDFLNNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRAFFENDLRFLKQFK
>NZ_LN907827.1|WP_067430246.1|1788826_1791214_+|phenylalanine--tRNA-ligase-subunit-beta
MKFSELWLREWVNPAMDSAALSDQITMAGLEVDGVDAVAGAFHGVVVGEVVECGQHPNADKLRVTKINTGGDRLLDIVCGAPNCRQGLKVAVATVGAVLPGDFKIKAAKLRGEPSEGMLCSFSELGISDDHNGIIELPADAPVGQDIRQFLQLDDNTIEISVTPNRADCLSILGVARDVAVMNKLPLQEPAIQPVAASLGDTFPVRVDAVEACPRYLARVVKGIDVTAATPLWMKEKLRRCGIRSIDPVVDITNFVLLELGQPMHAFDLDRLEGGIVVRMAKEGETLTLLDGNEARLSADTLVIADHQKALAMGGIFGGEHSGVNSETRNVLFECAFFAPLSITGRARRHGLHTDASHRYERGVDPALQYKALERATQLLLDICGGEAGPVIDQTSEQHLPQPATITLRREKLDRLIGHVISDSDVTDILTRLGCQVSVGEGQWQAVAPGWRFDMAIEEDLVEEIARVYGYNNIPDVPVQAGLIMTKHREANLSLKRVKTMLVDKGYQEAITYSFVDPKIQALIHPGEEHLLLPSPISVDMSAMRLSLWSGLLSAVVYNQNRQQSRVRLFESGLRFVPDTQADLGIRQEVMLAGVLTGTRNEEHWDLARQAVDFYDLKGDLESVLELTGKMDAISFRAEANPALHPGQSAAIYLHDERIGFIGVVHPELERKLDLNGRTLVFELLWNKLADRVLPEAREISRFPANRRDIAVVVAESVPAADIIAECKKVGVNQIVGVNLFDVYRGKGVNEGEKSLAISLILQDTSRTLEDEEIAATVAKCVAALKERFQATLRD
>NZ_LN907827.1|WP_017802142.1|1791218_1791518_+|integration-host-factor-subunit-alpha
MALTKAEMSEYLFEKLGLSKRDAKELVELFFEEVRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKED

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Crispr_ID: NZ_LN907827_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN907827_4

3184086-3184181

Orphan

Consensus_repeat	Method
GAGTCAATCGAACGGCGTTCGATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN907827_4

>merge|NZ_LN907827|4|3184086-3184181|CRISPRCasFinder
GAGTCAATCGAACGGCGTTCGATGAGGCGTTTGGCTTCTAAAAAGCAAAAACCCAGCCAGAGGGAGGTGGCGAGTCAATCGAACGGCGTTCGATGA

>NZ_LN907827|4|4|3184086-3184181|CRISPRCasFinder
GAGTCAATCGAACGGCGTTCGATGA	GGCGTTTGGCTTCTAAAAAGCAAAAACCCAGCCAGAGGGAGGTGGC
GAGTCAATCGAACGGCGTTCGATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN907827.1\|WP_067433671.1\|3189249_3189624_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319962
NZ_LN907827.1\|WP_067433626.1\|3172965_3173454_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_LN907827.1\|WP_067433647.1\|3178779_3179355_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133025
NZ_LN907827.1\|WP_071852528.1\|3195821_3198713_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|227334
NZ_LN907827.1\|WP_067433668.1\|3187273_3189130_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|236761
NZ_LN907827.1\|WP_067433656.1\|3181300_3182314_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238562
NZ_LN907827.1\|WP_067433684.1\|3195518_3195806_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_LN907827.1\|WP_067433678.1\|3190529_3192890_-\|glycoside-hydrolase-family-31-protein	unknown	unknown	gnl\|CDD\|224418
NZ_LN907827.1\|WP_067435523.1\|3183570_3184080_+\|polyketide-cyclase	unknown	unknown	gnl\|CDD\|176864
NZ_LN907827.1\|WP_067433650.1\|3179588_3180572_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|176248
NZ_LN907827.1\|WP_067433662.1\|3184673_3185996_+\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|206779
NZ_LN907827.1\|WP_067433644.1\|3177808_3178780_-\|XdhC-family-protein	unknown	unknown	gnl\|CDD\|224886
NZ_LN907827.1\|WP_067433633.1\|3174459_3176715_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NZ_LN907827.1\|WP_067433680.1\|3192886_3194206_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273326
NZ_LN907827.1\|WP_067433682.1\|3194449_3195511_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_LN907827.1\|WP_067433653.1\|3180769_3181300_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN907827.1\|WP_067433629.1\|3173450_3174458_+\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238
NZ_LN907827.1\|WP_067433622.1\|3171979_3172819_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293828
NZ_LN907827.1\|WP_067433665.1\|3186246_3187209_+\|omptin-family-outer-membrane-protease	unknown	unknown	gnl\|CDD\|236813
NZ_LN907827.1\|WP_067433675.1\|3189954_3190467_+\|non-heme-ferritin	unknown	unknown	gnl\|CDD\|224445

Protein	Function_ID	Function_description	E-value
NZ_LN907827.1\|WP_067433671.1\|3189249_3189624_-\|VOC-family-protein	gnl\|CDD\|319962	cd16355, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) superfamily. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	3.12152e-27
NZ_LN907827.1\|WP_067433626.1\|3172965_3173454_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	2.12917e-84
NZ_LN907827.1\|WP_067433647.1\|3178779_3179355_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.96982e-32
NZ_LN907827.1\|WP_071852528.1\|3195821_3198713_-\|EAL-domain-containing-protein	gnl\|CDD\|227334	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms].	6.62313e-116
NZ_LN907827.1\|WP_067433668.1\|3187273_3189130_-\|penicillin-binding-protein-2	gnl\|CDD\|236761	PRK10795, PRK10795, penicillin-binding protein 2; Provisional.	0
NZ_LN907827.1\|WP_067433656.1\|3181300_3182314_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	1.21983e-64
NZ_LN907827.1\|WP_067433684.1\|3195518_3195806_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	1.29736e-10
NZ_LN907827.1\|WP_067433678.1\|3190529_3192890_-\|glycoside-hydrolase-family-31-protein	gnl\|CDD\|224418	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism].	0
NZ_LN907827.1\|WP_067435523.1\|3183570_3184080_+\|polyketide-cyclase	gnl\|CDD\|176864	cd07822, SRPBCC_4, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	1.83428e-17
NZ_LN907827.1\|WP_067433650.1\|3179588_3180572_+\|oxidoreductase	gnl\|CDD\|176248	cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NZ_LN907827.1\|WP_067433662.1\|3184673_3185996_+\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	gnl\|CDD\|206779	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain. Methyl-accepting chemotaxis proteins (MCPs or chemotaxis receptors) are an integral part of the transmembrane protein complex that controls bacterial chemotaxis, together with the histidine kinase CheA, the receptor-coupling protein CheW, receptor-modification enzymes, and localized phosphatases. MCPs contain a four helix trans membrane region, an N-terminal periplasmic ligand binding domain, and a C-terminal HAMP domain followed by a cytoplasmic signaling domain. This C-terminal signaling domain dimerizes into a four-helix bundle and interacts with CheA through the adaptor protein CheW.	8.49811e-36
NZ_LN907827.1\|WP_067433644.1\|3177808_3178780_-\|XdhC-family-protein	gnl\|CDD\|224886	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones].	2.45584e-57
NZ_LN907827.1\|WP_067433633.1\|3174459_3176715_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	1.71352e-175
NZ_LN907827.1\|WP_067433680.1\|3192886_3194206_-\|MFS-transporter	gnl\|CDD\|273326	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.39491e-73
NZ_LN907827.1\|WP_067433682.1\|3194449_3195511_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.09798e-68
NZ_LN907827.1\|WP_067433629.1\|3173450_3174458_+\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	4.21993e-79
NZ_LN907827.1\|WP_067433622.1\|3171979_3172819_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293828	cd07742, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.78538e-123
NZ_LN907827.1\|WP_067433665.1\|3186246_3187209_+\|omptin-family-outer-membrane-protease	gnl\|CDD\|236813	PRK10993, PRK10993, omptin family outer membrane protease.	3.92493e-103
NZ_LN907827.1\|WP_067433675.1\|3189954_3190467_+\|non-heme-ferritin	gnl\|CDD\|224445	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism].	4.09638e-78

>NZ_LN907827.1|WP_067435523.1|3183570_3184080_+|polyketide-cyclase
MNAIIWPADFEPGYTENFASNEIILAGLSAADIWPLLADASRWPGYYANSANVRFYDGAGPQLADGVRFYFETFGFPVEAQCNEYQPPTADQAGRIAWHGWAGEGDTRLDVHHAWLVEDLSGQRVRILTQETQKGKPAAELALANPNPMINGHQDWLNGLVSAARAAKV
>NZ_LN907827.1|WP_067433656.1|3181300_3182314_-|ABC-transporter-substrate-binding-protein
MKPSLLLPLLAALMVGGAQARTVTDDLGNQVQVPAQARAIADGWYAHHSVLMTLGAGDRIVATVNHAADRPWMFAIQPSLQQALAVRGRTFESEALLARHVDVVFVPAEDDDAAAYRRAGLPTLVMKFNDFPSMKRDLLTTAEVVGTDRARQRARAWNAYLDEKVNAIGAVTRNLSEAQRPRVLHIQSLHPLKVDGRDTLIDTWIRLAGGRNAAAQVSGNMKETTPESVIAWQPEVIIIDASAGTLEQSDYAALFSSLPAVKQHRVWRNPAGVFPWDRYGTEAALQIQWAAAKLHPQRFVGIDMVKITQDFYRRFFDYPLTAQQAERILHAEPPLAG
>NZ_LN907827.1|WP_067433653.1|3180769_3181300_+|hypothetical-protein
MNIACLGWGSLIWKTEALPVEGSWLTDGPQVPIEFSRVSDGGELSTAICLNGATVPVLWARLATDSLPAACEALRQREQIPAERTDGVGRLVVGESATGPLSQWARQNQLDAVIWTALPPRFALLEGRTPSVEEAIAWLAGLRGEQQQHARDYIEQVPAQIDTPYRRAIKQQLGWG
>NZ_LN907827.1|WP_067433650.1|3179588_3180572_+|oxidoreductase
MFRALVINDNEAEGYHCRLQDVDESQLPPGNVTVDIDYSTLNYKDALAISGKAPIIRSFPMVPGVDFAGTVSASDDATFAPGDKVILTGWGVGERHWGGLAQRACVEAGWLVKQPDNLSARQAMIIGTAGFTAMLCINALEKQGITPASGSIVVSGASGGVGGVAVSLLARLGYQVSAVTGRPQERDYLLQLGAAEIIDRSELDKPGKPLQKARWAAAIDTVGSHTLANLCASVMHGGAVAACGNAQGMDFPASVAPFILRGITLTGVDSVTVPQAQRQHVWQQLAGLVDDALLESLSDECTLDEAVDRAHQLMAGEIRGRLVVKCR
>NZ_LN907827.1|WP_067433647.1|3178779_3179355_-|NTP-transferase-domain-containing-protein
MNSCGIIITAAGFGRRYQAAGGKGVKLEQPLASGEPLFAAVLRHAVASGLPVQVVTRPDYRGIQALCTQANVSWCAIDSRGMGDTIAEGVRRCLNWQGWLIQPGDMPGVPVAAYQQVTQALTQRLTARMVWQQLPGHPVGFAAPLRDSLLQLAGDSGAKALLREHPPLLISSTDRGVVDDIDLPLNTTGKP
>NZ_LN907827.1|WP_067433644.1|3177808_3178780_-|XdhC-family-protein
MQHIDLQVIDQGQRWLVSQPVWLCTVLCTFGSSPRPPGTMMVITADGDYCGSLSGGCIEEDFIRRIRQGDFQQPSQRVRYGDGGLTPDRTLPCGGVLDILIEHLQPSDDNAQRLAQLHRALAGHLALQKVITLPHACERLEEIVWRSSTVVEQQGDRITLTIAAPPRLIVAGLSTVALYCASFAVSLGFETIVCENRPDFLANFASQLDAAVRLEKCFPARYLEEQSCHANTAVVALTHDPRMDDLTMMEAVHTPAFYLGVMGSQRNSANRRQRLAQIGDLSAADLTRIHAPIGMDIGSKTPAEIALAVMADIVKAKNGGERA
>NZ_LN907827.1|WP_067433633.1|3174459_3176715_+|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MTDHNSYQATGEKRVRGDGQQKITGQATYAVEHQPENVTYGVVLQSTISSGRITRVNSEAARAQPGVLAVFTHESGLKIHKPTAIADGGAAQSTYTPMQNDRIIHNGQNIGIVVAETFEQATWAASLVTFDYEASPALIFATDENAAPKPVESSDIDLGDARKAMDDAEVRIEGRYITPREYNSPIEPHGCVVEWQDNEHVTLWEPSQWVAGAQVEIADWMGIDKKAVRIISPYVGGGFGSKPVPYTHVALACAASRELKRPIKVALTRPQTFTGFGGRPATEQHLEMGATRDGKIVSIIHSGFNETSLDDMFGESCNKVTARMYGVPNVHSRHSVVPINTVTPGWMRAPGENPSAFGLEVAMDEMAYKLNIDPLAFRLLNWADHDYMLDLPWSSRRLKEAYQAGAEAFGWDKRTMAPRSMREGRELIGYGMASGTYPVNTMPAEARLVLQANGQLTVQSAGADIGTGTYTILAQAAAEVLHIPSTAIKVELGDTDLPRAGVAGGSQLAGNLMGVVNKTAKVLRDKLLSLATELADSPFYRADPAQLTLDNGEIRQSGKAIGFTRLLQMAQLSELEAKADTFPEGTSAQERFDMTGSMSAMSRPKEVSAHSWSAQFVEVRVDEDFGTVRVKRMCAALDSGRLYNPTLGRSQWIGGMIMGLGQALLEEGVVDPRNGRVINNNLADYLVAVNADVPEIVTIDVGQPDYQATALGGKSVGELGIVGVAAAISNAVFHATGKRVRDLPITMDKLL
>NZ_LN907827.1|WP_067433629.1|3173450_3174458_+|xanthine-dehydrogenase-family-protein-subunit-M
MNPFHYQRASSSDAAIELRSQQDNSRFLAGGTTLLDLMKCGVEQPETLIDISQLSGLDTLRFEDDKITIGALASMSQLADHPQCQALAPAIYGSLWQAASPQLRNMATIGGNLRQRTRCVYFRDPATFPACNKRQPGSGCAALDGVNANHAIFGTSDSCIAVYPGDLAIALTAFDAQVVLRNSQQQERRVAIGDFFLLPGDRPDQEHDIAADEMIIAVEVPNVPALRQSHYLKVRDRASYEFAAASAAVGLEIEDGVIRDVRIALGGLATKPWRATAVEQALRGKPFSEEALRLAAEQSIADADPRPQSQFKVTLTPRVIVRALLAAAEPAQRGE
>NZ_LN907827.1|WP_067433626.1|3172965_3173454_+|(2Fe-2S)-binding-protein
MSENIRLQLNVNGHQHDLAVDPRATLLDALRENLQLTGTKKGCDQGQCGACTVHIDGERVLSCLTLAAQAAGRDVTTIEGMADADGTLHAVQASFLKHDAFQCGYCTPGQIMSAVACIKEGHARSDDEIREYMSGNICRCGAYPHIVDAVREAAAQLSKESA
>NZ_LN907827.1|WP_067433622.1|3171979_3172819_+|MBL-fold-metallo-hydrolase
MRIHHLNCGCMCPLGGALYDGFSHGIKAHLVCHCLLIETDSHGLILIDTGFGLQDMRRPADRLTRFFRTLNNIQYRDELTALNQVQRLGFRAEDVRHIVLTHLDFDHAGGLTDFPHAQVHLMQQEIDTAEQRHSWLRRERYRPAQWSARSGWHGYQAAGERWFGFDAVNQLQGLPPEILLVPLPGHTLGHAGIAIRQPNGWLLHGGDAWFYRGELHQAQRHCTPGLRFYQWMMQADGAARRKNQQRLRELSLAHGNDITFFCSHDAQELQRLSPGFSID
>NZ_LN907827.1|WP_067433662.1|3184673_3185996_+|PAS-domain-containing-methyl-accepting-chemotaxis-protein
MFSTITSGLMSRMASQPRRHSSATLSSLKGSIAMIEFSEDGTIITANPLFLDSMGYTLTEIVGQHHRIFCPPEEVSSAGYAAFWQRLRTGDSLSSKFLRLAKNGRPVWLEAHYVPVKDRSGKVFKIVKLATDITSHIVDAQEKRAITTAIERSMAVISFNLQGEVLKANDNFLKTMGYREEEVSGKHHRIFCAESVYNSAKYTEFWNKLKRGEFISGQFPRIDKQGKTVWLRATYNPVFDSNGQLYEVVKFATDVTAQVEKNLLERQAASQAYQTALETDKSTRLGATVIENSVQTMHDLAGELQGISGDISDLSEQSERIAFIVESIRSIANQTNLLALNAAIEAARAGAHGRSFAVVANEVRTLAANINHATSEIEGMIQQNHTLADKALKGIESNLKRADQGVVLAKEAGGVIAEIRDSASEVVRAIGSVTEALKAK
>NZ_LN907827.1|WP_067433665.1|3186246_3187209_+|omptin-family-outer-membrane-protease
MKKTSASLFSVTSCLLTLPLLFSSQVSANSLTQGDVQTSLSFGFLSGKAKEFVFDDSYKLSELNWTIKNAPIVNAEFNYDITPRFSLNARGWTTIVGGNGFNNDWDWEDINDNNFTSHSWGKTNLNYANEIDLSARAWFLQTDRYQAGVLAGYQKSRFSWNMRGGKYNYRGELDDNDNYIAYPEPDTGEFDNSKLSLGYKQSFSAPYIGLTGLWRKDDVEFGALVKFSPWVQSKDNDEHYLRDATFRNKGNDAKMVSARVYAGYDITPQIKLLTEASYTRYSFTRADTQIFDEEGVENHPGGGGLSNQSWMVQAGLQYRF
>NZ_LN907827.1|WP_067433668.1|3187273_3189130_-|penicillin-binding-protein-2
MNLRNFEAEERLFVRRACVAMVLVIACFAILACNLYRLQIDEHGYYQTRSNQNDIKMIPIAPTRGLIYDRNGIPLVKNVTWYDIQITPYKVSDMAATLQALTPLINLTPDEIDTFKHDLKQSSRYKPVILKSELSDEQVARFAVNQYRFTGVAVESYQDRQYPYGAELAHVVGYVSKINDADDKRLSAAGIAESYAADHNIGKQGIEGFYESLLHGKPGYQEVEVDNHGRVVRVLKEVPPVAGKNLTLTLDLHLQQYIERQLAGQRAALLVEDPRDGGVLAMVSSPSYDPNPFVKGISYKNYQHLLADKNLPLINRVTQGLYPPASTVKPYMAMSALLTGVITPQSHFFGAPTWTLPGTDRRYRDWKHSGHGMLDVTKAIEESADTFFYQVAYMMGIDRIHQLLSEFGYGKATGIDLHEEYNGLLPSREWKQRVHKKAWYQGDTISVGIGQGYWIATPIQMVKAMVTLINNGRVTQPHLLAQAQRGKQITPWQPTQSQPQIGSASSPYWSLVRHAMFGMANAPNGTGYKYFHTAPYGIAAKSGTSQVFSLRKDQTYNAKMIPVRLRDHIFYTAFAPFDHPQVAVALILENGGSEGVTAAPVMRNILDHIFLPAAKPVP
>NZ_LN907827.1|WP_067433671.1|3189249_3189624_-|VOC-family-protein
MTDSTLLAGAFVLAVPDLSRSAAYFRDVLGFTLAWPEASGWQLATRGAVRIMLGHSPDAMLPSATGDHSYFAYLYVDDAAALYAEFARNGAILPQPPEDKPHGMREFSVVTPDGHRMMVGEDLD
>NZ_LN907827.1|WP_067433675.1|3189954_3190467_+|non-heme-ferritin
MLTNEMTGKLNEQLNLEFYSANLYLQMSAWCADKGLEGAAAFLKEHSREEMEHMQRLFDYLSDTGAMPVIGTLNAPPVSFNSLAELFEQTYEHEKLVTSKINELAHAAMMSQDYSTFNFLQWYVSEQHEEEKLFKTVLDKLAMVGSSGKGLFLIDKDLARMNANSHGPSA
>NZ_LN907827.1|WP_067433678.1|3190529_3192890_-|glycoside-hydrolase-family-31-protein
MKTLKQWQLAQQTDAFIELKVDGRHLFRLYVLGDGVMRVLIKREGVLDLPRSWSIAPADDVPWQGRDRESLAGFTPPGYQLEQQQDRLLLTSGRLRVTVHQPLWLAWEYHDGTDWQPLAEDRHTGAYLLDAQGNGVEHYQRRQADQRFYGLGEKSGDLNRGGRRFEMRNLDAMGYNAASTDPLYKHIPFTITQRGNASFGLFYDNLSSSWFDLGNELDNYHPAYRRYRAEAGDLDYWLLLGPRVLDVTKAFVRLTGRTLFLPKWSLGYSGSTMHYTDAPDAQQQLLKFIELCREHQIPCDSFQLSSGYTSINNKRYVFNWNYSKVPQPQAMSQAFHDAGLKLAANIKPCLLQDHPRYQQVAEQGLFIRDSEQDSPERSVFWDDEGSHLDFTNPATVRWWQENVTSQLLEMGIDATWNDNNEYEVWDGEARCHGFGDEIAIKHIRPVMPLLMMRASMEAQQRFAPEKRPYLISRSGCAGMQRYVQTWSGDNRTNWQTLRYNTRMGIGMSLSGLYNVGHDVGGFSGDKPDAELFIRWVQNGVMHPRFTIHSWNDDATVNEPWMYPAATPAVREAIRLRYRLMPYLYTLLWLASSEDEPMLRPTFLDHEHDARTFEENDEFLLGRDLLVASVVEQGARQRTLWLPEQPHGWYDWHSGTWFAGGQQITLEAPLERLPLLVRAGAALPLGNAYGCDASIADTTRQLAIWPLSAGESCGMLFEDDGESHGWRDGHALWLRWTIRCDAERIDIHFEQQGDYRPAWRELELLLPPGEQRTLCVQGEESRRFTLA
>NZ_LN907827.1|WP_067433680.1|3192886_3194206_-|MFS-transporter
MHVDSNTKPVAAVTSRRIFRNLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQYSWVVAAFQLAYTLFQPVCGWLIDVIGLKMGFLICAIFWSLMCLLHAGAGSWLQLAILRFFMGASEAAATPANAKAIGDWFPKKERPIAAGWAGVGFSLGAMLAPPIIYVAHISFGWQGAFLLSGAIGLVWVALWAFLYHSPETHPRLSDEERAFISQDNEPPAVRLPFFRALKIIGKDKRFYGIALPAFLAEPAWAVLSFWVPLYLANERGMDLKQIVMFAWLPFLAADLGSVASGYLTKLYTRWFGCTRVNSVVASSVTGAVLMLSLAAMTQVKDPYLAIALISIGGFGHQIISCMLSALVVEKFDRGQMATVNGMRGSCAWIASFIFSLIIGVTADTVGFNPLFIAMGFFDLIGAIFLVIWIADRRSAKDSGKTQ
>NZ_LN907827.1|WP_067433682.1|3194449_3195511_+|LacI-family-DNA-binding-transcriptional-regulator
MKGKLNIREIAAQAGLSIATVSRVLAGKANTRAATREKVLAIARQHGVMENLTAGRLLLNNLVVFAPPRAFDQRTDIFYYKVIQGIHQALNHHDVRVRYCGIDELDSDAALFLEKMHQPETDAAIIVGIDDRHIHQLAAELNKPCVLINCLDQRMRLPAVSPDHQLIGHFSANYLFEQGHRQLLTLHCLRRYTMAQRLAGVRDAWRANNLYMDERRHLLTAEGFGSAEAEQRVSAWLQRTPANKRPTAILAGGDFMAMGAMSALQNAGLRVPQDISVMSMDGFNLAAIHDIALTSVHVPRNELGSEAVRVLQQRLLNPDGPCGNLLLAGRLVNGETVRRLRQQAPVRQEGLYE
>NZ_LN907827.1|WP_067433684.1|3195518_3195806_-|helix-turn-helix-transcriptional-regulator
MKTETNAMPEGKMLIQDMAEAMLLQPGLQKLREELHLSQKNVAEGMGISQPAVAQIEQRGNEIKLDTLKRYVEALGGKLSITVELPDGSGRIFHL
>NZ_LN907827.1|WP_071852528.1|3195821_3198713_-|EAL-domain-containing-protein
MNNNDDILYRLLVQSVVDYAIYMLMPDGTVANWNAGAQRAKGYTPEEIVGKNFAQFYTQEDRDKGMPQRGLSIARETGRFETEGWRLRKDGSAFWAHVVIDAVHDDGGKLIGFAKITRDRTQAQEAERKVREQEAKFRLLVEGVTDYAIYMLDQDGLVVNWNAGAQRAKGYVAEEVIGKHFGIFYSMQDRLTYLPERNLQTAWRTGRFEDEGWRYRKDGTTFWAHVIIDAIRDESGQLIGYAKITRDCTEQQRVERERREQETKFRLLVEGVTDYAIYMLDLQGRVVNWNAGAQRAKGYLASEILNKHFSVFYSGQERLEKTPEANLHVAFTSGRFEDEGWRYRKDGSAFWAHVVIDAIHDDNGKLIGYAKITRDVTEKREHEQQLLRAKDLAEAQSAQMESLSNFLDNIISNIPSCVIVEDAISREILLINDKAEQLFGTTKAQFQHRRPQDCMSPELSDYFNDLADIALRTEGVHQCEQLLTTSTGERILHSRATTIKGEDARQDYVMLIVEDVTDQREVDARIRHMAHHDNLTSLPNRVLFRQRLSEALRTDAQHHKLLAVLCLDLDNFKNVNDALGHQIGDELLRSVAKRLRGVIRDSDTLARIGGDEFAIVLPGLDKLDEASALASRLIEAIRPPVNIEGHNLTVGLSVGIALASSAIGSPEHLLRCADMALYEAKRNGRNRYEHFTLAMDDAARTRRIIENDLREAITNKQLKLYYQPITDAEHTNILGYEALMRWHHPVKGLIMPNDFIPIAEETGLIHMLGAYALYEACREAVSWAGEQTISVNLSPMQFKNSSLVSTVEAALRDSGLSPHRLEVEITESVLLDDSLGNIRTLQNLKALGVMIALDDFGTGYSSLSYLRSFPFDKIKIDKSFINDMGDSREALAIIRAITGMSRSLDIQITAEGVESSEQFLKLREEGCTLFQGYFFGRPQPSELRLESLEQQCWLQGGSLLPSI

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Crispr_ID: NZ_LN907827_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN907827_5

3296501-3296608

Orphan

Consensus_repeat	Method
TTAAGGTCAACGTCTTAAGGTCAACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN907827_5

>merge|NZ_LN907827|5|3296501-3296608|CRISPRCasFinder
TTAAGGTCAACGTCTTAAGGTCAACGTCTTAAGGTCAACGTCTTAAGGTCAAAGGCCATTTCGTTCTGCCTTACTGGCGGCTTTAAGGTCAACGTCTTAAGGTCAACG

>NZ_LN907827|5|5|3296501-3296608|CRISPRCasFinder
TTAAGGTCAACGTCTTAAGGTCAACG	TCTTAAGGTCAACGTCTTAAGGTCAAAGGCCATTTCGTTCTGCCTTACTGGCGGCT
TTAAGGTCAACGTCTTAAGGTCAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN907827.1\|WP_067433875.1\|3288665_3289787_-\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	unknown	unknown	gnl\|CDD\|273623
NZ_LN907827.1\|WP_067433923.1\|3303634_3307405_-\|translocation/assembly-module-TamB	unknown	unknown	gnl\|CDD\|225463
NZ_LN907827.1\|WP_067433896.1\|3293850_3294234_-\|cytochrome-b562	unknown	unknown	gnl\|CDD\|185018
NZ_LN907827.1\|WP_067433884.1\|3291612_3292389_-\|DUF4311-domain-containing-protein	unknown	unknown	gnl\|CDD\|274659
NZ_LN907827.1\|WP_067433893.1\|3293181_3293520_-\|glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|132621
NZ_LN907827.1\|WP_067433882.1\|3290954_3291602_-\|DUF4310-family-protein	unknown	unknown	gnl\|CDD\|132618
NZ_LN907827.1\|WP_067435550.1\|3302139_3302589_+\|DUF441-domain-containing-protein	unknown	unknown	gnl\|CDD\|377279
NZ_LN907827.1\|WP_067433878.1\|3289770_3290907_-\|amidohydrolase/deacetylase-family-metallohydrolase	unknown	unknown	gnl\|CDD\|132622
NZ_LN907827.1\|WP_067433887.1\|3292474_3292771_-\|DUF4312-family-protein	unknown	unknown	gnl\|CDD\|213831
NZ_LN907827.1\|WP_067433926.1\|3307401_3309138_-\|outer-membrane-protein-assembly-factor	unknown	unknown	gnl\|CDD\|223801
NZ_LN907827.1\|WP_067433899.1\|3294301_3295642_-\|metalloprotease-PmbA	unknown	unknown	gnl\|CDD\|182922
NZ_LN907827.1\|WP_067433929.1\|3309648_3310974_+\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_LN907827.1\|WP_067433890.1\|3292767_3293124_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132616
NZ_LN907827.1\|WP_067435547.1\|3299952_3301512_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008
NZ_LN907827.1\|WP_067433905.1\|3295923_3296472_+\|ribosome-associated-protein	unknown	unknown	gnl\|CDD\|235377
NZ_LN907827.1\|WP_067433908.1\|3297386_3298739_-\|UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl--meso-diaminopimelate-ligase	unknown	unknown	gnl\|CDD\|130153
NZ_LN907827.1\|WP_067433917.1\|3302688_3303219_+\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|179262
NZ_LN907827.1\|WP_067433914.1\|3301684_3302095_+\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|226278
NZ_LN907827.1\|WP_067433911.1\|3298906_3299914_+\|class-1-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236458
NZ_LN907827.1\|WP_067433920.1\|3303275_3303632_-\|gamma-glutamylcyclotransferase	unknown	unknown	gnl\|CDD\|225016

Protein	Function_ID	Function_description	E-value
NZ_LN907827.1\|WP_067433875.1\|3288665_3289787_-\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	gnl\|CDD\|273623	TIGR01437, selA_rel, uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. [Unknown function, Enzymes of unknown specificity].	0
NZ_LN907827.1\|WP_067433923.1\|3303634_3307405_-\|translocation/assembly-module-TamB	gnl\|CDD\|225463	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_LN907827.1\|WP_067433896.1\|3293850_3294234_-\|cytochrome-b562	gnl\|CDD\|185018	PRK15058, PRK15058, cytochrome b562; Provisional.	9.09492e-29
NZ_LN907827.1\|WP_067433884.1\|3291612_3292389_-\|DUF4311-domain-containing-protein	gnl\|CDD\|274659	TIGR03580, EF_0832, conserved hypothetical protein EF_0832/AHA_3913. Members of this family of relatively rare proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Unknown function, General].	3.67743e-153
NZ_LN907827.1\|WP_067433893.1\|3293181_3293520_-\|glycine-dehydrogenase	gnl\|CDD\|132621	TIGR03582, EF_0829, PRD domain protein EF_0829/AHA_3910. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. This protein contains a PRD domain (see pfam00874). The function is unknown. [Unknown function, General].	7.79192e-37
NZ_LN907827.1\|WP_067433882.1\|3290954_3291602_-\|DUF4310-family-protein	gnl\|CDD\|132618	TIGR03579, EF_0833, conserved hypothetical protein EF_0833/AHA_3914. Members of this family of relatively rare proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.	2.89084e-102
NZ_LN907827.1\|WP_067435550.1\|3302139_3302589_+\|DUF441-domain-containing-protein	gnl\|CDD\|377279	pfam04284, DUF441, Protein of unknown function (DUF441). Predicted to be an integral membrane protein.	2.55372e-44
NZ_LN907827.1\|WP_067433878.1\|3289770_3290907_-\|amidohydrolase/deacetylase-family-metallohydrolase	gnl\|CDD\|132622	TIGR03583, EF_0837, probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown. [Hypothetical proteins, Conserved].	0
NZ_LN907827.1\|WP_067433887.1\|3292474_3292771_-\|DUF4312-family-protein	gnl\|CDD\|213831	TIGR03578, EF_0831, conserved hypothetical protein EF_0831/AHA_3912. Members of this family of small (about 100 amino acid), relatively rare proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved].	1.72939e-37
NZ_LN907827.1\|WP_067433926.1\|3307401_3309138_-\|outer-membrane-protein-assembly-factor	gnl\|CDD\|223801	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane].	0
NZ_LN907827.1\|WP_067433899.1\|3294301_3295642_-\|metalloprotease-PmbA	gnl\|CDD\|182922	PRK11040, PRK11040, peptidase PmbA; Provisional.	0
NZ_LN907827.1\|WP_067433929.1\|3309648_3310974_+\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	1.92607e-142
NZ_LN907827.1\|WP_067433890.1\|3292767_3293124_-\|hypothetical-protein	gnl\|CDD\|132616	TIGR03577, EF_0830, conserved hypothetical protein EF_0830/AHA_3911. Members of this family of small (about 120 amino acid), relatively rare proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved].	6.71037e-60
NZ_LN907827.1\|WP_067435547.1\|3299952_3301512_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	4.98296e-108
NZ_LN907827.1\|WP_067433905.1\|3295923_3296472_+\|ribosome-associated-protein	gnl\|CDD\|235377	PRK05255, PRK05255, ribosome-associated protein.	5.52833e-82
NZ_LN907827.1\|WP_067433908.1\|3297386_3298739_-\|UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl--meso-diaminopimelate-ligase	gnl\|CDD\|130153	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase. Alternate name: murein tripeptide ligase [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_LN907827.1\|WP_067433917.1\|3302688_3303219_+\|inorganic-diphosphatase	gnl\|CDD\|179262	PRK01250, PRK01250, inorganic diphosphatase.	1.6326e-130
NZ_LN907827.1\|WP_067433914.1\|3301684_3302095_+\|DUF1311-domain-containing-protein	gnl\|CDD\|226278	COG3755, COG3755, Uncharacterized protein conserved in bacteria [Function unknown].	1.49298e-09
NZ_LN907827.1\|WP_067433911.1\|3298906_3299914_+\|class-1-fructose-bisphosphatase	gnl\|CDD\|236458	PRK09293, PRK09293, class 1 fructose-bisphosphatase.	0
NZ_LN907827.1\|WP_067433920.1\|3303275_3303632_-\|gamma-glutamylcyclotransferase	gnl\|CDD\|225016	COG2105, COG2105, Uncharacterized conserved protein [Function unknown].	8.80979e-39

>NZ_LN907827.1|WP_067433905.1|3295923_3296472_+|ribosome-associated-protein
MNNHPEDEWLDDAPDNHEEEDEEIIWVSKSEIKRDAEELKRLGAELMELSKNSLDKIPLDDDLRAAIELAQRIKKEGRRRQLQLIGKMLRSREEEPIRLALDKLKNRHNQQVALFHKLEGLRDRLVEQGDDVIAEVIALYPDADRQQLRSMIRNAQKEKATNKPPKAYRQIFQYLRELAETQ
>NZ_LN907827.1|WP_067433899.1|3294301_3295642_-|metalloprotease-PmbA
MNVSNQVAEQRKVLEQAVAMALELAKAGTDGAEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSEDGIKRTVQAAIDIARYTSPDPFAGMADPELLAFDAPDLDLYHPADLDADRAIELAARAEQASLKADKRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSCVIAEVDGDMERDYAYTVGRALDDLQSPEWVGEECARRTLARLSPRKLSTMKAPVLFGREVATGLFGHLVGAISGSSVYRKSTFLLDAMGQQILPEWLTINEQPHLLKGLASTPFDSEGVRTQQRDIIKDGVLQTWLMTSYSARKLGLQSTGHAGGIHNWRIQGQGDNFEQMLKKLGTGLLVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGSDIETRSNIQCGSVLLPEMKIAGQ
>NZ_LN907827.1|WP_067433896.1|3293850_3294234_-|cytochrome-b562
MRKPLLAMLSISLLFSSAAALADLEQDMDMLKGGLRVVMKTDDRAEMTRALGDMRKAAQDARTQTPDKLEGQPADSAQVKDFHAGIDSLIAQINVVDKLAQANNLDGAKAEAKKLTDIRDSNHKKFR
>NZ_LN907827.1|WP_067433893.1|3293181_3293520_-|glycine-dehydrogenase
MNNGAVSVSNTATPEQIQALADRVLGQINRLFAAQQISPNPVQQQMLASHVKAMALRSLTGEALPDVDADLFDEISPASIALAQQVVDLFGNLPVEEAWLLSVHIDVARENQ
>NZ_LN907827.1|WP_067433890.1|3292767_3293124_-|hypothetical-protein
MVTVVIGDRLGKGLKVAAGVEKAGGRAVVVPGVAADMKLGDVMKAEGADFGISFCGSGGAGAITAQNKYGYKAKHGMRSVEEGVTAINEGATVLGFGFMDKEELGERLVQAWNKKYSG
>NZ_LN907827.1|WP_067433887.1|3292474_3292771_-|DUF4312-family-protein
MKEHYTTTVTVSGKGESKSRAFADALNQVQHAVLRSTQKILLRIEPQDVRVISAHEAVKKEAFLFFFLAREKRSYRVELEITVNVTVIDTDKVTFTAA
>NZ_LN907827.1|WP_067433884.1|3291612_3292389_-|DUF4311-domain-containing-protein
MFLIILFKSLIIGALVGVGVGAGAARMFHAPTSQGMGAFRTLGELNSCEGDPASHFSFGLGFFFNAWASSVAAGAFTQDVDHRIIPNWGAAALMVKNRNLAETLHDPKKMAIACGIIGMIVVAFLNSTASAVPAALQVTAVKVLVPAANLLVNTVMPVIFWLAAIDAGKKSGFWATIFGGLAQLIMGNAVPGLVLGILIGKGVEESGWNRVTRVMMVAIVLLFVLSGFFRGFDMKMLQSLQLGIPGWLDAMHNAISGK
>NZ_LN907827.1|WP_067433882.1|3290954_3291602_-|DUF4310-family-protein
MEESKQGFWYADWSFPLFVGLLSSGVFAGTHMYYLYGIGAFNEVAFVSMLRAGIETGAYGAVAAFGASFLFARIIEGSLVGILDIGGAIQTGVGLGVPALLLGAGIVFPLENFAASLVTGLLIGLAVGYVIILARKFTINQSDSTYGADVMMGAGNASGRFLGPLIILSAMAASIPIGLGSLIGALLFYLWNKPITGGAILGAMILGAIFPVAIA
>NZ_LN907827.1|WP_067433878.1|3289770_3290907_-|amidohydrolase/deacetylase-family-metallohydrolase
MYDLIIRRARLVDEQQVDVALHNGKIAAIAAHIAEPAMQEHDLAGRYYLSAGWIDSHVHCYPASPIYHDEADQVGVTCGVTTVIDAGSTGADDIDDFYQLTHSAKTQVHALINIARSGIVTQNELADMAQIDGEAVQAAVQRLPDFILGLKARMSSSVVGTNGVQPLQRAKAIQRAIGGLPLMVHIGNNPPDLDEIAPLLSQGDIITHCFNGKPNRVLTPAGELRASVAAAMQRGVMLDVGHGSASFSFEVAQAAIAQGILPDTISSDIYCRNRLNGPVRSLAHVMSKFLAIGMTLPQVIACVTVQAAAALRLQHKGELTPGYDADLTIFARQNAQQDFIDSDGVQQHGEQHLVPLVAVVAGHWMPTAEGKTHHGFDL
>NZ_LN907827.1|WP_067433875.1|3288665_3289787_-|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase
MASIYEKYGLKQVINASGRMTILGVSTPTASVAAAVENGLSHYFEMKDLVNKTGEHIANLLQVESAVVVSCASAGIAQAVAAVIVKDDAWLLENLHASPLIVPHDIVLPKGHNVNYGAPVGSMVALGGGRVVEAGYSNECSAAQLAAAITPQTAAVMYVKSHHCVQKSHLSVAQAATVAHEHGLPLIVDAAAEEDLQAYYLAGADLVIYSGAKAIEGPSSGVVIGRQRYIEWVKLQANGIGRAMKVGKEGILGLTQAIEDYLIHEQSSGAQMVDKMMPFINQLNGLPGVSARVVWDSAGRDIARAEIRFDEAACGIGAGSVVQALKTGDIAIYFRGYKANEGIIEADVRSVSADQLQLIFEAIQRLLTGVETA
>NZ_LN907827.1|WP_067433908.1|3297386_3298739_-|UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl--meso-diaminopimelate-ligase
MRIHILGICGTFMGGLAMLARALGHEVTGSDNNVYPPMSTLLEKQGIDLTEGYDVSQLDPAPDLVIVGNAMTRGNPCVEAVLERNIPYLSGPQWLHDYVLRDRWVIAVAGTHGKTTTAGMTAWILQACGLEPGFVIGGVPGNFDVSANLGKTPFFVIEADEYDSAFFDKRSKFVHYAPRTLILNNLEFDHADIFDDLRAIQKQFHHLIRIVPGSGKILFPEHDANLKQVLAMGCWSEQESVGDGGHWQAKKLKPDASHWEVLFDGERVAEVNWALVGEHNMHNGLMAIAAARHVGIKPEDAGKALNDFINARRRLELRGESNGIQVYDDFAHHPTAIHATLAALRSKVGGRARILAVLEPRSNTMKMGINKDDLAPSLGRADEVFLLQPAHIPWQVAEVADACVQKASWSADVDTLVEMIAKSAQPGDTILVMSNGGFGGIHQKLLDRLA
>NZ_LN907827.1|WP_067433911.1|3298906_3299914_+|class-1-fructose-bisphosphatase
MKTLGEFIVEKQHDFPHATGELTALISAIKLGAKIIHRDINKAGLVDILGASGVENVQGEQQMKLDLFANEKLKAALKARGIVAGIASEEEDEFVIFEGAENGKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRITPPGTPVKEEDFMQPGSQQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLSAERMTYPPEGYTYSINEGNYIRFPQGVKKYLKFCQEEDAASHRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPQGKLRLLYECNPMAFLAEQAGGKASDGARRILDLQPETLHQRCPFFVGNTSMVDDIERFIRDYSDESAS
>NZ_LN907827.1|WP_067435547.1|3299952_3301512_-|methyl-accepting-chemotaxis-protein
MKKVSLRSGLLLLLACMTLLLLLVSVMGIIAINKGNRSLDVINRIQAIELNSLYQSNSGLMSARTNAALAVRKIEIGLLDEGTAISKHAAADLAESRQRLKQFVDAGTVTAHGKTLADAVVATFNVYVDQSITPMMTALNKQYTDEYYDLLEGNMSAQAQAFTEAVGNFGHYANQVTAAQLAQAAWNERMMKILIGISCVLTVLLIGFAWHILRIMLLTPLNQAITHLEGVAAGDLSQPEPAGGSNELGRLNRALADMQVALRHSVGRVREASQQIDVGSRELSAGNNNLSQRTEASAASLEQTAASMEQLTATVRLNAQNAEQAHQLANRVSDTADRGAQVVCHVMEKMQEITSSSARIGDILSVIDGIAFQTNILALNAAVEAARAGDQGRGFAVVANEVRNLAQRSGTAAKEIRTLIAESQTRVREGSDMATQAGETMDDIAGEVMRVTTLMKEISSASAEQSRGIEQVNLAVTQMDEVAQQNAALVEQAAAATQSLEEQSQQLVQTMALFRVSAA
>NZ_LN907827.1|WP_067433914.1|3301684_3302095_+|DUF1311-domain-containing-protein
MRKRILLCGGLMTASLLAHAAPADQALEQCLQHESTTAGMSGCYTTASKAWDKELNLAYQSAMAKLTGDDKAKLRSAQRAWLTYRDSWLATSKSLAAQQGTSGVLNYGAQAVSLIKNQTLMLQSLTQGSCANPDDC
>NZ_LN907827.1|WP_067435550.1|3302139_3302589_+|DUF441-domain-containing-protein
MTAYASLIILVLLAVLSFFVHNTAVTISILVLLAIKLTPLAQFFPVVEKQGITLGIIILTIAVMAPLASGTLPPSTLVKSFLDWKSLLAIVVGIFVSWLGGRGVSLMGAQPTIVGGLLIGTIIGVSLFRGVPVGPLIAAGIVSLFLVGK
>NZ_LN907827.1|WP_067433917.1|3302688_3303219_+|inorganic-diphosphatase
MSLNHVPAGKDLPEDIYVIIEIPANADPIKYEVDKESGSLFVDRFMSTAMFYPCNYGYINNTLSLDGDPVDVLVPTPYPLVPGSVIRCRPVGVLKMTDESGEDAKVVAVPHTKLSKEYDHIKDVNDLPELLRAQITHFFEHYKDLEKGKWVKVDGWDDVEAAKAEIVASFERAAKQ
>NZ_LN907827.1|WP_067433920.1|3303275_3303632_-|gamma-glutamylcyclotransferase
MRIIVYGTLRRKQGNSHWMTNAQLLGEHQIEGFQLYSLGHYPGVVPGDGKVICEVYRIDASTLGELDALRTKGGEYKRQLLQTPYGSAWLYVYQRPVAGRQLIDSGDWLLRDEQPEGE
>NZ_LN907827.1|WP_067433923.1|3303634_3307405_-|translocation/assembly-module-TamB
MSWWKKALIGLLIFLAVLLAAVAFLIGTTPGLHLLLNGASRWVPGLEIKKVDGGWRNLTLSGVQYEMPGVNVNVGKVHLAVQLGCLTHSAICVNDFSISDVNVAVDSKKMAPAAQQPVEEQPGSGDISTPYPITLRQLALHNINIKIDDTAVSLLDFTTGLAWQDKNLTITPTHIQSLLIALPKAAQVAQEQVIEPKVNKPQADEPPLGETLKAMFAKPLLPDLPEFRLPLNVDVQELIGEQLRITGDTDIAINRLLLKAKTADQLLQLQTLDIDSPQGQLNASGEATLADNWPVNFNLNGALNIDPLKGEKIKMTLGGAMRQQLNLALNLSGPVQAQLNGDAQPAVAGLPVNMSLTSPQLRWPLTGPVQVQADNLDFSFKGKATDYVMALRTAVKGESIPPANIALDGKGNVEQFSLDKLRIAALQGNADLTALVDWSKAISWRSELTLSGINTAKQYPDWPAKLDGKITTRGSLYGGTWQMRVPELQLKGNVKQNAVSAQGTLYGNSYNQWNIPALQLALGRNHIDVKGSLGDALNLDALVDAPSLDNALPGLGGVAKGSIKARGTLKAPQLLADLTATRLRWQQLQIARVTLQGDVRSSDQVSGKLALRVEQLQQDALKIRLLTLNADGDEKKHQLKLNVQGEPVSGQLALSGSFDRQSERWQGSMNDTRFDTPVGVWRLSRAMSLDYLNSKQTVTIGTHCWLNPNAELCVPQPIEAGPSGHARVALNRFDLAMIKPFLTDETKLTGVFSGDADVTWTADGALPQGRVSLKGNGVKVEQDVQGNTLPVAFTALNLNAALRDGRAQLDWLIRIANNGQLDGNVQIADPQNRRTLSGNVNITNISLALLNPALMQGEKIAGMLNSNLRLGGNLQQPQVFGQLGLRNIDVEGSFMPVDLTAANLSMVFNGMSSTLQGAIQTAKGNINLNGNADWSQIDNWRARIAAQGSRVRVTVPPMVRLDVSPDLVFDASPTAFNLNGSVDIPWARITVQEVPESATGVSSDEVLLDENLKPIAPQTAAIPINSNLVIHVGNDVRLSAFGLKAKLNGDLKLVQDKRGLGLNGQINIPSGRFHAYGQDLLVRKGELQFAGPPDQPYVNLEAIRNPDATEDGVTAGLRVTGLADEPKAEVFADPAMSQQEALSYLLRGQGLGSDGDSNALTSALVGLGVAQSGQVVGKIGETFGVSNLALDTAGVGDSQQVQVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPKLYLEAVSGLDQTLDLLYQFEF
>NZ_LN907827.1|WP_067433926.1|3307401_3309138_-|outer-membrane-protein-assembly-factor
MPGFRFYCLCCLLVAPAVEAATVRLQLEGLTGELQKNVRAQLSTIASDEVSSDGRFRARVAEAIKGGLRALGYYEPDIDFESRPAPAAGGRPVLIAHVKAGEPVKIAGSTIIVSGDAHNDSDYKAWVAQGTPKKGTVLNHGAYEKFKNGFTNLALRNGYFDGDFKKSQLGVSVERREAFWDLDYDSGERYRFGDVTYQGSQIREEYLDNLVPFKKGDYYSSRELAELNRRLSATGWFNSVVVAPEFDKGRQSKILPLSAVVSPRTENTIETGVGYSTDVGPRLKATWKKPWVNDRGHSLSASANVSAPEQELAFGYKVPVLKSPLEQYYTFSGGLKRTDLNDTKADTTTLGLARNWDNSSGWQKALNLRWSLDHFTQGNVTNTTMLLYPGASINRTRSRGGLMPTWGDSQRYSVDVSDTTWGSDVDFMILQAQNVWIRTLADKHRFVARGNLGWIETNDFDRVPPDLRFFAGGDRSIRGYKYKNIAPRDEDGKLVGASKLATGSLEYQYNVTGKWWSAVFVDSGEAVDDIKQSNVKTGAGVGVRWSSPVGPIKFDIAKPIGDKESSNLQFYVGLGPEL
>NZ_LN907827.1|WP_067433929.1|3309648_3310974_+|HlyC/CorC-family-transporter
MLNSLLVIVLLIAVSSFFSLSEISLAAARKIKLKLLADDGNINAQRVLKMQETPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFYSLFIRVADHELAEQLSFICSFTVVTSFFILFADLTPKRIGMIAPEAIALRIINPMRFCLFMLRPLVWFFNGMANTIFRLFKIPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTSRENIVWFNLHEDETSLKTKIAQHPHSKFLVCNDDIDHIVGYVDSKELLLRVLGNQSMALSSGVQIRAALIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLVEGGTPIDDVMRVLDIDDFPQSGNYETIGGFMMFMLRKIPKRTDFVKFSGYKFEVVDIDSYRIDQLLVTRIDARPTTLNVLKNEEAE

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	3749793-3749817	0	1.0
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	3749805-3749829	0	1.0
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	3749817-3749841	0	1.0
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	3749829-3749853	0	1.0
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	183180-183204	0	1.0
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	183192-183216	0	1.0
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	183204-183228	0	1.0
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	NZ_LN907827.1	2318276-2318301	1	0.962
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	NZ_LN907827.1	3161953-3161978	1	0.962
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	NZ_LN907827.1	3177698-3177723	1	0.962
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	3142118-3142142	1	0.96
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	3749781-3749805	1	0.96
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	183216-183240	1	0.96
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	336070-336094	1	0.96
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	NZ_LN907827.1	3163178-3163203	2	0.923
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	NZ_LN907827.1	3209278-3209303	2	0.923
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	2317667-2317691	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	2392134-2392158	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	2392146-2392170	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	2392158-2392182	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	2392170-2392194	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	2392182-2392206	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	2392194-2392218	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	195164-195188	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	195176-195200	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	195188-195212	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638410-638434	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638422-638446	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638434-638458	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638446-638470	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638458-638482	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638470-638494	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638482-638506	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638494-638518	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638506-638530	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638518-638542	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638530-638554	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638542-638566	2	0.92
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_LN907827.1	638554-638578	2	0.92

1. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 3749793-3749817, mismatch: 0, identity: 1.0

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacctg	Protospacer
*************************

2. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 3749805-3749829, mismatch: 0, identity: 1.0

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacctg	Protospacer
*************************

3. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 3749817-3749841, mismatch: 0, identity: 1.0

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacctg	Protospacer
*************************

4. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 3749829-3749853, mismatch: 0, identity: 1.0

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacctg	Protospacer
*************************

5. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 183180-183204, mismatch: 0, identity: 1.0

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacctg	Protospacer
*************************

6. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 183192-183216, mismatch: 0, identity: 1.0

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacctg	Protospacer
*************************

7. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 183204-183228, mismatch: 0, identity: 1.0

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacctg	Protospacer
*************************

8. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to position: 2318276-2318301, mismatch: 1, identity: 0.962

gacgttgaccttaaagccgccagcaa	CRISPR spacer
gacgttgaccttaaagccgcctgcaa	Protospacer
********************* ****

9. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to position: 3161953-3161978, mismatch: 1, identity: 0.962

gacgttgaccttaaagccgccagcaa	CRISPR spacer
gacgttgaccttaaagccgcctgcaa	Protospacer
********************* ****

10. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to position: 3177698-3177723, mismatch: 1, identity: 0.962

gacgttgaccttaaagccgccagcaa	CRISPR spacer
gacgttgaccttaaagccgcctgcaa	Protospacer
********************* ****

11. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 3142118-3142142, mismatch: 1, identity: 0.96

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacttgggttttgacctg	Protospacer
**********.**************

12. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 3749781-3749805, mismatch: 1, identity: 0.96

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacttg	Protospacer
**********************.**

13. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 183216-183240, mismatch: 1, identity: 0.96

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacttg	Protospacer
**********************.**

14. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 336070-336094, mismatch: 1, identity: 0.96

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacctgggttttgacttg	Protospacer
**********************.**

15. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to position: 3163178-3163203, mismatch: 2, identity: 0.923

gacgttgaccttaaagccgccagcaa	CRISPR spacer
gaccttgaccttaaagccgcctgcaa	Protospacer
*** ***************** ****

16. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to position: 3209278-3209303, mismatch: 2, identity: 0.923

gacgttgaccttaaagccgccagcaa	CRISPR spacer
gaccttgaccttaaagccgcctgcaa	Protospacer
*** ***************** ****

17. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 2317667-2317691, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacttg	Protospacer
********** ***********.**

18. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 2392134-2392158, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacttg	Protospacer
********** ***********.**

19. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 2392146-2392170, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

20. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 2392158-2392182, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

21. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 2392170-2392194, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

22. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 2392182-2392206, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

23. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 2392194-2392218, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

24. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 195164-195188, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacttgggttttgacttg	Protospacer
**********.***********.**

25. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 195176-195200, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacttgggttttgacttg	Protospacer
**********.***********.**

26. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 195188-195212, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacttgggttttgacttg	Protospacer
**********.***********.**

27. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638410-638434, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

28. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638422-638446, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

29. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638434-638458, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

30. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638446-638470, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

31. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638458-638482, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

32. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638470-638494, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

33. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638482-638506, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

34. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638494-638518, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

35. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638506-638530, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

36. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638518-638542, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

37. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638530-638554, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacgtg	Protospacer
********** *********** **

38. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638542-638566, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacgtgggttttgacttg	Protospacer
********** ***********.**

39. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to position: 638554-638578, mismatch: 2, identity: 0.92

gggttttgacctgggttttgacctg	CRISPR spacer
gggttttgacttgggttttgacttg	Protospacer
**********.***********.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1557602-1557626	3	0.88
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_AP022558	Geobacillus subterraneus strain E55-1 plasmid pGspE55-1, complete sequence	74937-74961	3	0.88
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581091	Vibrio phage Cla, complete genome	34502-34527	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581096	Vibrio phage pVa-5, complete genome	34503-34528	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	MK672804	Vibrio phage Va_178/90_p41, complete genome	7958-7983	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KY658673	Vibrio phage H2 PGK-2017, complete genome	27425-27450	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581093	Vibrio phage Pel, complete genome	34503-34528	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581097	Vibrio phage pVa-6, complete genome	34503-34528	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KY658677	Vibrio phage P3, complete genome	34518-34543	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581098	Vibrio phage VaK, complete genome	34507-34532	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KY658674	Vibrio phage H8, complete genome	27433-27458	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KY658676	Vibrio phage P2, complete genome	27425-27450	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581090	Vibrio phage Her, complete genome	34502-34527	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KY658678	Vibrio phage pVa-3, complete genome	35620-35645	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KY658679	Vibrio phage pVa-4, complete genome	35571-35596	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	MK672800	Vibrio phage Va_90-11-287_p41_Ba35, complete genome	36771-36796	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	MK672799	Vibrio phage Va_90-11-287_p41, complete genome	36771-36796	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581092	Vibrio phage Len, complete genome	34502-34527	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581094	Vibrio phage pVa-2, complete genome	34502-34527	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	MK672803	Vibrio phage Va_91-7-154_p41, complete genome	18216-18241	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KY658680	Vibrio phage pVa-8, complete genome	34503-34528	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KY658675	Vibrio phage H20, complete genome	34501-34526	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581095	Vibrio phage pVa-1, complete genome	34503-34528	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581099	Vibrio phage Strym, complete genome	34502-34527	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	MK672801	Vibrio phage Va_90-11-287_p41_T265, complete genome	36771-36796	4	0.846
NZ_LN907827_1	1.1\|183508\|26\|NZ_LN907827\|CRISPRCasFinder	183508-183533	26	KX581100	Vibrio phage pVa-7, complete genome	35544-35569	4	0.846
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	372322-372346	4	0.84
NZ_LN907827_2	2.2\|250719\|25\|NZ_LN907827\|CRISPRCasFinder	250719-250743	25	NZ_CP046659	Lactobacillus plantarum strain 123-17 plasmid p123-18.3, complete sequence	3577-3601	4	0.84

1. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

gggttttgacctgggttttgacctg	CRISPR spacer
cggttttgacctcggttttgacctc	Protospacer
 *********** ***********

2. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to NZ_AP022558 (Geobacillus subterraneus strain E55-1 plasmid pGspE55-1, complete sequence) position: , mismatch: 3, identity: 0.88

gggttttgacctgggttttgacctg	CRISPR spacer
gggctttgacctcggttttgacctt	Protospacer
***.******** ***********

3. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581091 (Vibrio phage Cla, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

4. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581096 (Vibrio phage pVa-5, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

5. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to MK672804 (Vibrio phage Va_178/90_p41, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

6. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KY658673 (Vibrio phage H2 PGK-2017, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

7. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581093 (Vibrio phage Pel, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

8. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581097 (Vibrio phage pVa-6, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

9. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KY658677 (Vibrio phage P3, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

10. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581098 (Vibrio phage VaK, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

11. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KY658674 (Vibrio phage H8, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

12. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KY658676 (Vibrio phage P2, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

13. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581090 (Vibrio phage Her, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

14. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KY658678 (Vibrio phage pVa-3, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

15. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KY658679 (Vibrio phage pVa-4, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

16. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to MK672800 (Vibrio phage Va_90-11-287_p41_Ba35, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

17. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to MK672799 (Vibrio phage Va_90-11-287_p41, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

18. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581092 (Vibrio phage Len, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

19. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581094 (Vibrio phage pVa-2, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

20. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to MK672803 (Vibrio phage Va_91-7-154_p41, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

21. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KY658680 (Vibrio phage pVa-8, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

22. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KY658675 (Vibrio phage H20, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

23. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581095 (Vibrio phage pVa-1, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

24. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581099 (Vibrio phage Strym, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

25. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to MK672801 (Vibrio phage Va_90-11-287_p41_T265, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

26. spacer 1.1|183508|26|NZ_LN907827|CRISPRCasFinder matches to KX581100 (Vibrio phage pVa-7, complete genome) position: , mismatch: 4, identity: 0.846

gacgttgaccttaaagccgccagcaa	CRISPR spacer
aacgttgaccctaaagacgccagcca	Protospacer
.*********.***** ******* *

27. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggttttgacctgggttttgacctg	CRISPR spacer
cggttttgatctcggttttgacctc	Protospacer
 ********.** ***********

28. spacer 2.2|250719|25|NZ_LN907827|CRISPRCasFinder matches to NZ_CP046659 (Lactobacillus plantarum strain 123-17 plasmid p123-18.3, complete sequence) position: , mismatch: 4, identity: 0.84

gggttttgacctgggttttgacctg	CRISPR spacer
tgattttgaccttggttttgacctt	Protospacer
 *.********* ***********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1784277 : 1794476

Tupanvirus(16.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067430235.1\|1784277_1786206_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	8.8e-128	37.3
WP_067430238.1\|1786209_1786761_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	2.2e-15	32.5
WP_004157374.1\|1786853_1787051_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_067430241.1\|1787154_1787511_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_157883913.1\|1787628_1787673_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_067430244.1\|1787828_1788812_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	4.9e-34	42.6
WP_067430246.1\|1788826_1791214_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	2.1e-09	31.2
WP_017802142.1\|1791218_1791518_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	5.5e-13	40.0
WP_067430249.1\|1791715_1792066_+	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_067430252.1\|1792160_1793144_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_067430255.1\|1793181_1793727_+	glutathione peroxidase	NA	NA	NA	NA
WP_067430258.1\|1793729_1794476_+	vitamin B12 ABC transporter ATP-binding protein BtuD	W5SAS9	Pithovirus	1.7e-07	28.8

DBSCAN-SWA_2

2164244 : 2230105

Erwinia_phage(70.0%)

integrase,plate,tRNA,terminase,protease,capsid,portal,tail,head

attL 2190057:2190074|attR 2211262:2211279

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067431189.1\|2164244_2164946_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_067431192.1\|2165006_2166917_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	1.9e-90	32.4
WP_173645369.1\|2167005_2167173_-	hypothetical protein	NA	NA	NA	NA
WP_157883864.1\|2167437_2167698_+	hypothetical protein	NA	NA	NA	NA
WP_067431195.1\|2167705_2167993_-	type V toxin-antitoxin system endoribonuclease antitoxin GhoS	NA	NA	NA	NA
WP_067431198.1\|2168274_2168619_+	RidA family protein	NA	NA	NA	NA
WP_067431201.1\|2168630_2168816_-	YoaH family protein	NA	NA	NA	NA
WP_067431204.1\|2168919_2170290_+	aminodeoxychorismate synthase component 1	S4VT78	Pandoravirus	1.6e-46	31.7
WP_067431207.1\|2170279_2170861_+	CoA pyrophosphatase	NA	NA	NA	NA
WP_067431210.1\|2171032_2172397_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_067431213.1\|2172613_2174176_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
WP_067431216.1\|2174219_2175785_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	4.7e-39	44.4
WP_067431219.1\|2176261_2177224_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_067431222.1\|2177281_2178079_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
WP_067431225.1\|2178094_2178940_+	PTS mannose transporter subunit IID	NA	NA	NA	NA
WP_067431228.1\|2178996_2179452_+	DUF986 domain-containing protein	NA	NA	NA	NA
WP_067435358.1\|2179825_2180386_+	manganese efflux pump MntP	NA	NA	NA	NA
WP_067431231.1\|2180382_2181198_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
WP_001062678.1\|2181334_2181544_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
WP_157883919.1\|2181625_2181700_-	DUF2627 domain-containing protein	NA	NA	NA	NA
WP_067431234.1\|2182230_2183226_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_067431237.1\|2183243_2183498_-	YebO family protein	NA	NA	NA	NA
WP_067431240.1\|2183672_2183909_+	hypothetical protein	NA	NA	NA	NA
WP_067431243.1\|2183926_2184718_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_157883865.1\|2185169_2185805_+	hypothetical protein	NA	NA	NA	NA
WP_067431249.1\|2186058_2187441_+	MFS transporter	NA	NA	NA	NA
WP_067431253.1\|2187489_2188371_-\|protease	protease HtpX	NA	NA	NA	NA
WP_067431255.1\|2188569_2190597_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	3.0e-86	33.4
2190057:2190074	attL	NA	NA	NA	NA
WP_067431258.1\|2190616_2191303_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_067431261.1\|2191408_2191900_-	GAF domain-containing protein	NA	NA	NA	NA
WP_067435361.1\|2192121_2193366_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_067431263.1\|2193334_2195974_+	PqiB family protein	NA	NA	NA	NA
WP_157883866.1\|2195943_2197488_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_067431266.1\|2197489_2198137_-	metallophosphoesterase	K7P6H8	Enterobacteria_phage	1.6e-57	49.3
WP_067431269.1\|2198624_2199689_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	1.5e-116	57.5
WP_157883867.1\|2200047_2200755_+	hypothetical protein	NA	NA	NA	NA
WP_067431275.1\|2200922_2201141_-	ogr/Delta-like zinc finger family protein	F1BUT0	Erwinia_phage	8.0e-30	83.3
WP_067431279.1\|2201212_2202403_-	phage late control D family protein	S4TRX8	Salmonella_phage	5.6e-149	70.0
WP_067431282.1\|2202396_2202924_-\|tail	phage tail protein	F1BUT6	Erwinia_phage	3.4e-58	84.8
WP_067431284.1\|2202926_2205365_-\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	8.7e-181	62.4
WP_067431287.1\|2205354_2205480_-\|tail	GpE family phage tail protein	Q858U8	Yersinia_virus	8.4e-08	61.5
WP_067431290.1\|2205512_2205791_-\|tail	phage tail assembly protein	F1BUU0	Erwinia_phage	1.9e-31	75.0
WP_067431293.1\|2205848_2206361_-\|tail	phage major tail tube protein	F1BUU2	Erwinia_phage	6.6e-83	87.6
WP_067431297.1\|2206373_2207543_-\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	2.3e-208	93.1
WP_067435367.1\|2207706_2207952_+	hypothetical protein	NA	NA	NA	NA
WP_067431301.1\|2207992_2208583_-\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	1.4e-47	49.5
WP_067431304.1\|2208582_2209650_-\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	3.9e-101	56.6
WP_067431307.1\|2209646_2210255_-\|tail	phage tail protein I	F1BUP2	Erwinia_phage	1.2e-99	85.1
WP_067431310.1\|2210247_2211156_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	6.2e-140	86.8
WP_067431313.1\|2211160_2211508_-	GPW/gp25 family protein	F1BUP4	Erwinia_phage	4.2e-49	83.3
2211262:2211279	attR	NA	NA	NA	NA
WP_067431316.1\|2211504_2212089_-\|plate	phage baseplate assembly protein V	F1BUP5	Erwinia_phage	1.3e-87	82.0
WP_067431319.1\|2212178_2213258_+	hypothetical protein	NA	NA	NA	NA
WP_067431322.1\|2213259_2213709_-	phage virion morphogenesis protein	F1BUP7	Erwinia_phage	2.9e-50	74.1
WP_067431325.1\|2213705_2214173_-\|tail	phage tail protein	F1BUP9	Erwinia_phage	2.0e-65	81.3
WP_067431328.1\|2214247_2214697_-	LysB family transcriptional regulator	F1BUQ1	Erwinia_phage	3.3e-46	69.4
WP_067431331.1\|2214693_2215203_-	lysozyme	E5G6N1	Salmonella_phage	1.8e-56	66.3
WP_067435370.1\|2215186_2215411_-	hypothetical protein	F1BUQ4	Erwinia_phage	4.0e-32	86.5
WP_067431334.1\|2215416_2215620_-\|tail	tail protein X	F1BUQ5	Erwinia_phage	1.5e-25	79.1
WP_067431337.1\|2215619_2216090_-\|head	head completion/stabilization protein	F1BUQ6	Erwinia_phage	1.6e-59	76.5
WP_067431340.1\|2216179_2216848_-	hypothetical protein	F1BUQ7	Erwinia_phage	3.5e-100	83.8
WP_067431343.1\|2216851_2217928_-\|capsid	phage major capsid protein, P2 family	F1BUQ8	Erwinia_phage	4.7e-171	83.9
WP_067431346.1\|2217976_2218822_-\|capsid	GPO family capsid scaffolding protein	F1BUR1	Erwinia_phage	8.0e-118	78.4
WP_067435373.1\|2218967_2220731_+\|terminase	terminase ATPase subunit family protein	F1BUR2	Erwinia_phage	0.0e+00	93.0
WP_067431349.1\|2220730_2221753_+\|portal	phage portal protein	F1BUR7	Erwinia_phage	3.6e-181	90.9
WP_067435379.1\|2221786_2222527_-	restriction endonuclease	NA	NA	NA	NA
WP_067431352.1\|2222519_2223440_-	hypothetical protein	NA	NA	NA	NA
WP_173645370.1\|2223909_2224086_-	hypothetical protein	NA	NA	NA	NA
WP_082691659.1\|2224194_2226492_-	replication endonuclease	F1BUS0	Erwinia_phage	0.0e+00	74.2
WP_067431355.1\|2226492_2227104_-	hypothetical protein	NA	NA	NA	NA
WP_067431361.1\|2227106_2227328_-	TraR/DksA family transcriptional regulator	F1BUS2	Erwinia_phage	8.7e-16	52.8
WP_067431364.1\|2227327_2227555_-	DUF2732 domain-containing protein	F1BUS3	Erwinia_phage	1.6e-20	69.3
WP_157883868.1\|2227624_2228008_-	hypothetical protein	F1BUS4	Erwinia_phage	4.1e-53	77.2
WP_071852509.1\|2228010_2228196_-	DUF2724 domain-containing protein	F1BUS5	Erwinia_phage	1.3e-17	67.2
WP_067431367.1\|2228203_2228713_-	phage regulatory CII family protein	F1BUS6	Erwinia_phage	5.1e-59	70.4
WP_067431370.1\|2228744_2229146_-	hypothetical protein	NA	NA	NA	NA
WP_067431373.1\|2229259_2230105_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	2.5e-79	53.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_LN907828

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

495984 : 503258

Bacillus_phage(33.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067436798.1\|495984_498015_+\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	1.5e-21	28.0
WP_082691706.1\|498102_498648_-	flavin reductase	Q9KX93	Enterobacteria_phage	8.5e-20	51.6
WP_067436801.1\|498640_499231_-	malonic semialdehyde reductase	NA	NA	NA	NA
WP_067436804.1\|499595_499808_-	cold shock protein CspG	A0A1W6JNX5	Morganella_phage	1.7e-24	80.0
WP_067436807.1\|500544_500799_-	hypothetical protein	NA	NA	NA	NA
WP_067436810.1\|500965_501307_-	multidrug efflux SMR transporter	E5E3Y9	Acinetobacter_phage	5.7e-06	32.7
WP_067436812.1\|501399_502566_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	2.4e-19	26.2
WP_067436815.1\|502562_503258_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.7e-25	30.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_LN907829

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8182 : 72936

uncultured_Caudovirales_phage(22.22%)

integrase

attL 56930:56957|attR 86607:86634

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067437072.1\|8182_8860_-\|integrase	integrase	A0A2K9V411	Faecalibacterium_phage	6.4e-25	35.5
WP_067437075.1\|8949_9258_-	hypothetical protein	NA	NA	NA	NA
WP_067437078.1\|10306_11293_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	7.6e-51	39.8
WP_067437081.1\|11367_11970_-	hypothetical protein	NA	NA	NA	NA
WP_067437084.1\|12062_12689_-	hypothetical protein	NA	NA	NA	NA
WP_157883956.1\|12768_13131_-	hypothetical protein	NA	NA	NA	NA
WP_157883957.1\|13200_13527_-	hypothetical protein	NA	NA	NA	NA
WP_067437096.1\|13981_14329_-	hypothetical protein	NA	NA	NA	NA
WP_067437375.1\|14638_15532_-\|integrase	integrase domain-containing protein	NA	NA	NA	NA
WP_067437098.1\|16475_16826_+	hypothetical protein	NA	NA	NA	NA
WP_067437378.1\|17662_18559_+	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	5.4e-72	52.5
WP_067437381.1\|19067_20342_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	1.7e-143	60.0
WP_067437383.1\|20350_20764_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.6e-26	50.8
WP_067437104.1\|21150_21486_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_162265774.1\|21512_22205_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	9.3e-96	75.7
WP_067437109.1\|22267_22696_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.3e-52	71.4
WP_067437112.1\|22745_24029_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	1.7e-175	75.1
WP_067437115.1\|24126_24480_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	3.8e-21	56.1
WP_082691721.1\|24734_25616_-	arsenic resistance protein	NA	NA	NA	NA
WP_067437126.1\|26415_26874_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_082691722.1\|27199_29584_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.9e-135	44.8
WP_067437128.1\|29698_31822_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_067437131.1\|32879_33116_-	hypothetical protein	A0A218MNF2	uncultured_virus	3.4e-26	72.4
WP_067437134.1\|33492_34266_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	2.3e-10	26.2
WP_064691134.1\|34330_35032_-	DsbA family oxidoreductase	NA	NA	NA	NA
WP_067437136.1\|35085_36201_-	alkene reductase	NA	NA	NA	NA
WP_064691136.1\|36438_36768_+	thioredoxin family protein	V9SJ74	Achromobacter_phage	1.8e-09	37.2
WP_067437142.1\|36798_37137_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_067437145.1\|37141_37720_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_067437148.1\|38513_39377_+	EamA family transporter	NA	NA	NA	NA
WP_067437149.1\|39517_40729_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_029571183.1\|40762_42118_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-34	26.2
WP_029571184.1\|42280_42838_-	OsmC family protein	NA	NA	NA	NA
WP_071852582.1\|43392_44841_+	xylulokinase	NA	NA	NA	NA
WP_067437154.1\|44837_45863_+	ABC transporter permease	NA	NA	NA	NA
WP_067437157.1\|45904_46885_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_067437160.1\|48649_48934_+	DUF3892 domain-containing protein	NA	NA	NA	NA
WP_067437163.1\|48979_49540_-	SIS domain-containing protein	NA	NA	NA	NA
WP_067437389.1\|49553_50306_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-12	27.7
WP_067437166.1\|50410_51055_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_067437169.1\|51079_52333_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_067437177.1\|52356_52650_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_067437179.1\|52668_53118_-	PTS galactitol transporter subunit IIA	NA	NA	NA	NA
WP_067437182.1\|53568_54537_-	hypothetical protein	NA	NA	NA	NA
WP_067437391.1\|55068_56196_+	MFS transporter	NA	NA	NA	NA
WP_067437184.1\|56475_56886_+	ASCH domain-containing protein	NA	NA	NA	NA
56930:56957	attL	NA	NA	NA	NA
WP_067437186.1\|57068_57395_-	NIPSNAP family protein	NA	NA	NA	NA
WP_067437394.1\|59745_60744_-\|integrase	site-specific integrase	A0A166YH27	Gordonia_phage	3.4e-06	30.8
WP_061716752.1\|61120_61543_+	hypothetical protein	NA	NA	NA	NA
WP_039389851.1\|62394_62625_-	hypothetical protein	NA	NA	NA	NA
WP_039389849.1\|62921_64763_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_039389843.1\|65780_66161_+	copper homeostasis periplasmic binding protein CopC	NA	NA	NA	NA
WP_061716749.1\|66165_67098_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_067437192.1\|67129_67810_+	heavy metal response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-31	34.1
WP_067437195.1\|67806_69216_+	heavy metal sensor histidine kinase	NA	NA	NA	NA
WP_039389835.1\|69344_69695_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.4e-15	58.4
WP_067437198.1\|69844_71950_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_064740974.1\|71949_72936_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
86607:86634	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LN907827

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_LN907828

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_LN907829

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection