CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LN997848	Magnetospirillum sp. XM-1 isolate XM1 chromosome I	3 crisprs	WYL,csa3,DEDDh,DinG,RT	0	5	12	0
NZ_LN997849	Magnetospirillum sp. XM-1 isolate XM1 plasmid II, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LN997848_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN997848_1

2696032-2696286

Orphan

Consensus_repeat	Method
ACCGGCACCGGCAACGACGCGGT	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_LN997848_1

>merge|NZ_LN997848|1|2696032-2696286|CRISPRCasFinder
GGCGGCTCGGGTAACGACGCGGTCAAGATCAGCGGCGACACCTGGGCTTCGGTCTCCACCGGCGCGGGTGACGACAACGTCGTGGTCAACGGCTCGTTCTGGAATGCCGGCATGGATACCGGCACCGGCAACGACGCGGTCAAGATCGGCGGCAGCCTGGGCGGCACGGTCAACACCGGCGCCGGCAACGACGCGGTGCAGATCGGCGGCGACGCCTCCGGCTCGGTTTCCACCGAGGCGGGCAACGACACCGTC

>NZ_LN997848|1|1|2696032-2696286|CRISPRCasFinder
GGCGGCTCGGGTAACGACGCGGT	CAAGATCAGCGGCGACACCTGGGCTTCGGTCTCC
ACCGGCGCGGGTGACGACAACGT	CGTGGTCAACGGCTCGTTCTGGAATGCCGGCATGGAT
ACCGGCACCGGCAACGACGCGGT	CAAGATCGGCGGCAGCCTGGGCGGCACGGTCAAC
ACCGGCGCCGGCAACGACGCGGT	GCAGATCGGCGGCGACGCCTCCGGCTCGGTTTCC
ACCGAGGCGGGCAACGACACCGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN997848.1\|WP_172821920.1\|2707253_2712851_+\|DUF4347-domain-containing-protein	unknown	unknown	gnl\|CDD\|372982
NZ_LN997848.1\|WP_068433879.1\|2684216_2684627_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|106506
NZ_LN997848.1\|WP_156428719.1\|2680353_2683956_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_LN997848.1\|WP_068433887.1\|2703899_2704433_+\|nucleoside-2-deoxyribosyltransferase	unknown	unknown	gnl\|CDD\|377443
NZ_LN997848.1\|WP_068433872.1\|2677264_2678185_-\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|183829
NZ_LN997848.1\|WP_068433894.1\|2715286_2716597_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_LN997848.1\|WP_068433866.1\|2673279_2673945_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_156428720.1\|2684637_2684781_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_068433896.1\|2716600_2718703_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|100080
NZ_LN997848.1\|WP_068437772.1\|2704383_2705760_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
NZ_LN997848.1\|WP_068433864.1\|2671891_2673190_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NZ_LN997848.1\|WP_156428718.1\|2674061_2676212_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_LN997848.1\|WP_156428858.1\|2678271_2679351_-\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|379231
NZ_LN997848.1\|WP_082700492.1\|2702707_2703553_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_LN997848.1\|WP_068433870.1\|2676214_2677258_+\|TRAP-transporter-substrate-binding-protein-DctP	unknown	unknown	gnl\|CDD\|270395
NZ_LN997848.1\|WP_082700719.1\|2712856_2714554_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_LN997848.1\|WP_068433889.1\|2705906_2706788_-\|tail-fiber-protein	unknown	unknown	gnl\|CDD\|377845
NZ_LN997848.1\|WP_068433874.1\|2679431_2680028_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_LN997848.1\|WP_068433893.1\|2714550_2715270_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_LN997848.1\|WP_068433885.1\|2703582_2703885_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236038

Protein	Function_ID	Function_description	E-value
NZ_LN997848.1\|WP_172821920.1\|2707253_2712851_+\|DUF4347-domain-containing-protein	gnl\|CDD\|372982	pfam14252, DUF4347, Domain of unknown function (DUF4347). This domain family is found in bacteria and eukaryotes, and is approximately 160 amino acids in length. There are two completely conserved residues (C and G) that may be functionally important.	4.93169e-56
NZ_LN997848.1\|WP_068433879.1\|2684216_2684627_+\|PAS-domain-containing-protein	gnl\|CDD\|106506	PRK13560, PRK13560, hypothetical protein; Provisional.	9.96852e-20
NZ_LN997848.1\|WP_156428719.1\|2680353_2683956_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_LN997848.1\|WP_068433887.1\|2703899_2704433_+\|nucleoside-2-deoxyribosyltransferase	gnl\|CDD\|377443	pfam05014, Nuc_deoxyrib_tr, Nucleoside 2-deoxyribosyltransferase. Nucleoside 2-deoxyribosyltransferase EC:2.4.2.6 catalyzes the cleavage of the glycosidic bonds of 2`-deoxyribonucleosides.	5.14331e-42
NZ_LN997848.1\|WP_068433872.1\|2677264_2678185_-\|2-dehydropantoate-2-reductase	gnl\|CDD\|183829	PRK12921, PRK12921, oxidoreductase.	4.36279e-123
NZ_LN997848.1\|WP_068433894.1\|2715286_2716597_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.66948e-10
NZ_LN997848.1\|WP_068433889.1\|2705906_2706788_-\|tail-fiber-protein	gnl\|CDD\|377845	pfam07484, Collar, Phage Tail Collar Domain. This region is occasionally found in conjunction with pfam03335. Most of the family appear to be phage tail proteins; however some appear to be involved in other processes. For instance a member from Rhizobium leguminosarum may be involved in plant-microbe interactions. A related protein MrpB is involved in the pathogenicity of Microcystis aeruginosa. The finding of this family in a structural component of the phage tail fibre baseplate suggests that its function is structural rather than enzymatic. Structural studies show this region consists of a helix and a loop and three beta-strands. This alignment does not catch the third strand as it is separated from the rest of the structure by around 100 residues. This strand is conserved in homologs but the intervening sequence is not. Much of the function of phage T4 appears to reside in this intervening region. In the tertiary structure of the phage baseplate this domain forms part of the 'collar'. The domain may bind SO4, however the residues accredited with this vary between the PDB file and the Swiss-Prot entry. The long unconserved region maybe due to domain swapping in and out of a loop or reflective of rapid evolution.	1.98451e-14
NZ_LN997848.1\|WP_068433896.1\|2716600_2718703_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|100080	cd06159, S2P-M50_PDZ_Arch, Uncharacterized Archaeal homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group appears to be limited to Archaeal S2P/M50s homologs with additional putative N-terminal transmembrane spanning regions, relative to the core protein, and either one or two PDZ domains present.	8.74567e-08
NZ_LN997848.1\|WP_068437772.1\|2704383_2705760_-\|PAS-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	2.17111e-67
NZ_LN997848.1\|WP_068433864.1\|2671891_2673190_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_LN997848.1\|WP_068433885.1\|2703582_2703885_+\|hypothetical-protein	gnl\|CDD\|236038	PRK07521, flgK, flagellar hook-associated protein FlgK; Validated.	0.00021152
NZ_LN997848.1\|WP_156428858.1\|2678271_2679351_-\|FUSC-family-protein	gnl\|CDD\|379231	pfam13515, FUSC_2, Fusaric acid resistance protein-like.	8.32994e-19
NZ_LN997848.1\|WP_082700492.1\|2702707_2703553_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.10076e-62
NZ_LN997848.1\|WP_068433870.1\|2676214_2677258_+\|TRAP-transporter-substrate-binding-protein-DctP	gnl\|CDD\|270395	cd13677, PBP2_TRAP_SBP_like_6, Uncharacterized substrate-binding protein of the Tripartite ATP-independent Periplasmic transporter family; the type 2 periplasmic-binding protein fold. This subfamily includes uncharacterized periplasmic substrate-binding proteins similar to TRAP transport systems such as SiaP (a sialic acid binding virulence factor) and TeaA (an ectoine binding protein). TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process and a smaller membrane of unknown function. The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.30682e-103
NZ_LN997848.1\|WP_082700719.1\|2712856_2714554_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	5.81012e-18
NZ_LN997848.1\|WP_068433874.1\|2679431_2680028_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	3.24903e-43
NZ_LN997848.1\|WP_068433893.1\|2714550_2715270_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.80983e-29
NZ_LN997848.1\|WP_156428718.1\|2674061_2676212_+\|HAMP-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.73215e-50

>NZ_LN997848.1|WP_156428720.1|2684637_2684781_-|hypothetical-protein
MLEEWIRNVPLTLVERIVADRKAQGTPIWSLASIELMRRTQETCKAA
>NZ_LN997848.1|WP_068433879.1|2684216_2684627_+|PAS-domain-containing-protein
MSGITQPPWHILTDTDLVAALMDVIPHPIFFKDREGRYLGCNSHFCQMLGYGHDEVVGKTVFEIAPSNLAQVYHEADIKLMETGGTQCYASSVKYGDGLTRRGVFFKSVFHDKAGVAAGLVGMFYPMEFMLHVIDM
>NZ_LN997848.1|WP_156428719.1|2680353_2683956_-|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MADRALITVDGNEACASVAYRVSEVAAIYPITPSSTMGELADQWASEGRKNIWGVVPDVAEMQHEGGAAGAVHGALQAGSLATTFTASQGLLLMIPNMYKIAGELTSFCMHVTARTVATHGLSIFGDHSDVMACRQTGFGLLASGSGQEAHDMAAIAHSATLKARVPFLHFFDGFRTSHEVTKIEELNDEDLLALLDADSIAAHRARALSPDHPTLRGTAQNPDTFFQMQEARNPWYEACPGIVQQEMDRYAKLTGRAYKLFDYFGHPEAERVVIIMGSGAETVHETVTALAAKGEKVGVLKVRLYRPFSIDAFVSALPTSVRAIAVLDRCKEPGAIAEPLYLDILAALAEAKATGNRATAADPVVIGGRYGLASKEFTPGMAKAVFDELARSKPKRRFTVGITDDVTHLSLEPDSSFKLVQPKVKSAVFFGLGADGTVGANKNSIKIIAENAGFQGQGYFVYDSKKSGAITISHLRFSPEPIQSAYLLDSGDADFVACHHFVFLDKYEVLRYAAKGATFLLNSPHPADEVWTHLPREVQQEIIDKQIKVHVIDARKVALATGMGNRINTIMQTCFFALSGVLPRDEAIGHIKKAIEKTYGRKSEKLVAKNFEAVDETLHHMHEVKIPAEATSNRSLPPIVPEDSPDFVKRVSALMLANHGDKLPVSAFPVDGVWPTGTARFERRNIAAEIPVWDEGPCIQCNKCALVCPHAAIRAKVASPADMEAAPASFKRMDYRGNEFKGDAYIIQVAPEDCTGCTLCVKVCPGKDKKDPNRLALRMEAKDPILETEKANWAFFVDLPEVNKEKLGTPTVKTAQLLQPLFEFSGACLGCGETPYIKLMTQLWGDRLMIANATGCSSIYGGNLPTTPYTQNADGRGPAWANSLFEDNAEFGFGFRLAVDQHKNQAKLLLAALTATGQVPEKLANEIALAPQGSEVEIAVQRNRILELRKVLSGLKSADARLLEQVADYLVEKVVWIVGGDGWAYDIGYGGLDHVFASGKNVNILVMDTEVYSNTGGQQSKATPIGASAKFAIAGKTLPKKDLGMMAMAYEDVYVANVAFGSKDVQTMRAFQDAVSYPGVSLIVAYSHCIAHGYDLAHGLDQQKMAVEAGYWPLYRWDPRKMGSGESPLTLDSKEPNGKLYDFMKGEARFQMVERADPERYRKLVDSAESQLRRRFAMLRRFAGLPDAPPPAGGKEAAE
>NZ_LN997848.1|WP_068433874.1|2679431_2680028_-|NAD(P)H-dependent-oxidoreductase
MSQHQIAIIVGSLRKDSFNRKLADAIVKLAPPEFSFQHTQIGGLPLYNQDDDLTPVPAVSRLRAEIAAAHGLLFVTPEYNRSIPGVLKNALDHGSRPYGKSVWAGKPAGIMGCSPGAIGTSLAQQHLRNVLAYLDVPTLGQPEAFIQIKDGFFDADGAIANPDTRKFLQGWMDKYVSWVENLLRDKDGAYLRARFGGS
>NZ_LN997848.1|WP_156428858.1|2678271_2679351_-|FUSC-family-protein
MLAAIRVFIRSELAQLLTVHKSDRPWQMPFAAAMSSGLPIAVGAYFDHMSYGLISSLGGIVFLYLPATSLHHRMITLMACSFGLAACYTLGMLSQLITPLMVPVLAFIAALVTMVCRFYQIGPPGSLFFIMAAAIGAYSPVDLLQVPQHVGLLTMGCLLAGVIALLYSMHILRLRAPQPVAPPPPATFDYVVFEPVVIGAFVGISLALGQALNLPRPYWVPVSCLAVIQGMSLRAVWNRQVQRVAGTIFGLLISWGLLALPLDRWSIFMMMTSLVFVIETMVTRHYGVAVIFITPLTLFLAEAASFGHTSSAALIQARFIDTILGCLVGLVGGICLHTPRFRDVASRQIRRLIPSRMLP
>NZ_LN997848.1|WP_068433872.1|2677264_2678185_-|2-dehydropantoate-2-reductase
MRILVLGAGATGGYFGGRLAEAGADVTFLVRPKRARLLAEKGLRIQSPHGDAAFPVKTVTADTLSGHWDMVLLSCKAYDLDESIKAIAPAVGPESAVLPILNGLAHYGPLDAAFGPGRVIGGLCHIFSTLGADGEIVHMNNINRITFGERSGGTSARTEALAKAFGPAKCETRHSPEIMQEAWEKYVLLAPLAGMTCLMRASVGTIMATGDGEAIMREMFEECAAVASHAGHAPRPEARDLALGFLTQKGSAMTASMMRDLEAGGPTEGEHIVGDMLRRARAAGLAAPLLRTALTHLQAYEIRRKG
>NZ_LN997848.1|WP_068433870.1|2676214_2677258_+|TRAP-transporter-substrate-binding-protein-DctP
MRPLSAIVALVLLAALPARAGEGDKPAPPREIFLAHTQAQKSSANPTAAMAAEFKRQVERLTEGRVKVGIFPAGQLGGNREIARVIADNVVQTGFVTIGGVVPAYPPLAVTQIPFVFSSQEAAQAAFDGPFGRLLGEEIERRTGMMVLGYGDSGGMTALTNARRPIHRPEDMRGLKFRVIPGFKSQETMIRSLGAVPVPISSREELPALSAGVADGQMNTPLAILAGRFDEVQKYVTLTEHLYAPPLWLFNRKAFDALAPDEQQAVRQAADAALAAGRKLAAEIEGSERGISALYRRMTVTRLSAEERDAFRRVVQPVIIAEVQADLDEEGRALMGEFLKAAAPAGK
>NZ_LN997848.1|WP_156428718.1|2674061_2676212_+|HAMP-domain-containing-protein
MSTRSKRPRIRLRVGIAAMFLGIMLPLTALMTTVLYRQNSHLAADLAQNAMDGATRDVVSGVRNLLVPMARVVDLSTAFGKAEGEKLRRVETLRPLIDTLEAFPDLYALFFGFAKDGAFYEVIRLPPPGGKGLLDRKPPPEAKFALRIIDTVEGEATDSWIYITRWGNVVGVERAPKVAYDPRTRPWYKSAAGTQGVATSGIHVFSSIGKPGLTLSQRLMTDDGALIGVFAADLLTDTLSRFLAERAVGTKGRIFILDEDDRLLGYPDAEQSLVRGDKGLEIARIDQIADRVVADAARLRKDLGSRFKAELGPERDTYLVSFSPFPDEFGKHWTIGVVAEEGEFIAPLRRASIIILIIGTAFLVLAGAGVAWASRLLTRPIETLIGEVRHIEALDFSSTAVVRSSVIEVHALAAAIERMKTAMRSFAAYVPKDLVRTIMASSGIPTIDGERRPLTILFTDLQGFTQTSEFMAPEDVAHRLSIYFEMMSAAIIGSRGTIDKFIGDAIMAFWNAPSLDEDHVANACRAVLACRVLSEELNRDLVANRFPPMPTRFGLHSGVAVVGNVGSNDRMQYTVLGAEVNLASRIEGLNKMFGTSMLVTGAVEKQVRDRFVFRPLGVVAPAGVTLPVPVFELVASLEEGSTLAATEEQMAACADWNRAMKLFFARDWSAACPAFRDYLAARGEDGPARFFLDLAERYAADPPDEAWDGVLHFEGK
>NZ_LN997848.1|WP_068433866.1|2673279_2673945_+|hypothetical-protein
MILTPIDHTGLAGLKSEFEAALAEDPLALAVFRRVTALVPDGDLLTLSTEPEHRKGAVELCRRFGFKILEMSPQEHFTWDGEGVAVHLEPSVLIHEVGHYQLSSPERRKVLDFGLGAGPETGRKAEADAVQSLFLPERDVEEGLCSLLGILWEAELGQPAVLAFLEQNWMEGGSNLQNVGHFRKVVRWLHEMGLIDDTGAPTMGVREEGDDTFFTRWYADC
>NZ_LN997848.1|WP_068433864.1|2671891_2673190_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MDRIRIIGGTPLKGTITIGGAKNAALALMPACLLTEETLALSNLPHLVDITTMANLLAQHGVMMALNGNASNGGHTGRVLELTAATIGNTTAPYDLVRKMRASVLVLGPLLARCGEARVSLPGGCAIGTRPVDLHLKALEQMGAKIELDGGYIVASVEGRLKGAHIIFPQVTVGGTENILMAATLAEGETVIANAAREPEITDLAECLVAMGAKIDGIGTGTLKVQGVERLHGAEYSVVPDRIETGTYAVAAAITRGDIELVGARFDLMESVNKVLTECGVHVEETPRGMRVRADQGEITGVDIMTEPYPGFPTDMQAQLMALMSTAKGASMITETIFENRFMHVPEMTRMGARINVHGSSAIVRGAPKLSGAQVMATDLRASVSLVLAALAAEGETIVNRVYHLDRGYERVEEKLAACGAKIERLKDGVAE
>NZ_LN997848.1|WP_082700492.1|2702707_2703553_+|serine/threonine-protein-kinase
MEAGEHIGRYQVARHLIDTAFSRLYLCTDPQLGRPVVVKAFAMDAAKPEPPFSRAEWMRRFIMEGRIMAGLDHPHILPVHETGRLEDGSPFMVLPFMRANLPRLIGFDVAEDGMAEDELPQALDVGQSRFILLQVLAALAYLHRRGIVHRDIKPANVLLTARQGGIAKLCDFGFARLGTASDVPPRAWIGTLDYISPEQRAGAGGVGPAADIYSIGALAWRLLAGRLPGPEDGRPPLSELVPQAPPGLVGWVEAAMAADPEKRPSAEDSLRMLATGMRLGA
>NZ_LN997848.1|WP_068433885.1|2703582_2703885_+|hypothetical-protein
MISSIASTTLLSGLAAQSRVAQKAADNIANVTTPDYPAQRGQVVSASPAGARYVPLPPEGEVDLLREVVDLGQAKQAYILAARTFSRIARTEKDALDVLA
>NZ_LN997848.1|WP_068433887.1|2703899_2704433_+|nucleoside-2-deoxyribosyltransferase
MTYKPKAYLAGPAVFHPAAKALLDYLVEMCGQHDLEGVAPFEPQADDLKLPPAELAAMIRHGNIERIRECDVVIACVSPFRGPGACPGTTWEMGYAEALGKPVIAWSEDMRPYKERVPHDRDEDGRLFCRQHGMVVEDFGLVENLMYAAQPAEVLSDLEAAFKRARQLAAAPRPAAG
>NZ_LN997848.1|WP_068437772.1|2704383_2705760_-|PAS-domain-containing-protein
MGVAWRITGIYTAVGLSWIFLSSMAVWIGVGEPPGLASLLEMGKGCAFILVTAFMLLVLLRRWEGELNRRGEALIESNRELTELNTRLSGIMRGSQDLIAAWDRNKRLTAFNPRYQAVCWDFFERDVKVGMSAEEVFGHVPEKYRLFSECWDRTLAGESFVQLQSLDVDGDMAWFETSYGSLPGPDGLPSGGFHIVRDVTDRVRAEEDRRTHAEKLAKTVETLTEANSELERFAYVASHDLQEPLRTIACFAQLLERHYGQTLDDRGRQYVELVTSGAIRMHSLINDLLAYSRTTRSEGRIEIVSAESACQSALNNLREAIDSGGAEVIVEPLPEVSADSVMLIQIFQNLIGNAIKYRKTGIAPHIRVSAQRQERHWQFSVSDNGIGFDPSEQDVFELFRRLHPHSSYTGTGVGLAICKWIVNRLGGHIWVESTPGAGSTFRFTLPLGEAQRPVAAHA
>NZ_LN997848.1|WP_068433889.1|2705906_2706788_-|tail-fiber-protein
MKKMTFSTLITGVSTLALAAILSGTGAKDAQACSGPEPYIGTVCFTAAQWCPNGYIPADGRQLTVQSNQALFSLIGYYYGGNNTSIFNVPDLRGRSPIGYNPSTINTGGTVISPNTYASLRGSETATLSTSNVAPHIHPATFTGTGGGGSGPMAASGPVTLPVTVSVPAQNISVSGSLKIGSSTAAGAQAISNGAVMTKAGGGQGAIYAPSTTTADTNIGPSQTFSGSTSAAPATGTVTGTVTLPVTGATGITGGTVSVGPNSNSATPFHIVPPQSVLTACIANEGLYPPRPN
>NZ_LN997848.1|WP_172821920.1|2707253_2712851_+|DUF4347-domain-containing-protein
MTKLPDPASLRRQGGGAGRFSSRVPLVMALEPRLMFDGAAAVDAAHVVAEAAIKAAPAPVVIRDADPSKDNGKKEVVFVDTRVADYKTLEAGIRDGVAIVEIDGAADGLAQMAQWAETHSGYDAIHVLSHGSEASLRLGATTLTVAGLSDATVQVELSVIGQALAADGDILVYGCSIASGLDGQAFISALASATGADVAASSDTTGAAAQGGNWVVERSVGDVAAASLGIDGMRDYGGALTSATITFESSNGSIAGDGTTSVTYTHANITLTFTAKDDANTNAAQIALGSVMGAAYNGAEDLYFVNDGSGKGGSFTVTAGGGKIFDLTSFVFSNQNGNGLETFSITTSKGGSFTFSAGGTGVTKQSISVNSDVSNYQGITYFTITAPTGGAFMEIDDIVLDNIMSAPSFTSGASASFAENASGTVYTAAANASAGGGTVSYSITGGADQAKFSINSSSGALTFVSSPNYESPTDSGANNVYDVVITATDSNGSATKAVAVTVTNVNEAPSFTSGTTANFAENGTGTVYTATSSDPDSGATASYSIVGGADQAKFSINSSSGVLTFQSAPNYENPTDSDTNNTYVVTLRVSDGTNTVDQTVTVTVTNVNEAPTGVNDTGSATEAGGLSNATGGSNATGNVLTNDTDPDAGATKTVTAIRSGNTEGAGTAGTVGQALAGAYGSLTLNSDGSFTYVVLDSDSSVQALAAGQTLTDSYNYTVSDGTNTDIAVLTITINGANDLPVLGGTFTTAGTVNDNATTTPFSAVTFTDVDAGAVSVAITYTAANGTFASGGGGLTGSVGSYTLSGASPAALQTLLRALVFTPTANQTAPGGTVVTTFTLTPADATGNGTADATTQVTATSINDAPVNTKPAAQTTNEDTALVFSSGNGNALSVADADTGTTLTTVVSVASGKGVISVTTGGGGTITGNGSNSVHIVGTVAQVQNALGSVSYTPTADGYGTGYATLTISSTDAHTGTLNDTDTVTINVTGIADTPSVTSSSTTPSTQTTSGLVLSRNAADGAEVTHFKITGITNGTLYKNDGTTQINNGDFITFAEGNAGLKFTPSGGSDGSFTAQASTSGADGGLGGSTINAAIAVGAAVANPTVNEDTDSGAIAITRGSGETFYKITSITGGTLYSDAGYTTQINNGDFIANAGATTNVYFRPTANRNTTTGGNGSFVLQASSASNDGGLSGSLVTSTITLAPVADTPSVASPTVNEDTDSGAIAITRAAGDGAETTHYKITGITGGTLYSDASYTTQINNGDFIASGGATTNVYFRPTANRNTTTGGNGAFTVQASKSGVDAGLGGSTATSTITLAPVADTPSVASPTVNEDTDSGAIAITRAAGDGAETSHYKITGITGGTLYSDAGYTTQISNGDFIASGGATTNVYFRPTANRNSTTGGNGAFTVQASKSGVDAGLGGSTATSTITLTAIADTPSVTAASTAPSTQTTSGLVLSRNAGDGTETTHFKITGITNGTLYKNDGTTQINNGDFITFAEGNAGLKFTPSGSSAGSFTAQASKAANDGGLGGSTVNAAITVNRAPVAGGAALTLTDGKVGSAYSFSLPAGTFTDADNDTLSYTVSGLPAGLSMSTAGVISGNPTTPVDSVTLTFTATDPSNATATKTATLKIKAADVVAPPPQQQASSPPPPPTPPLPSEPPSAPLVTTVRANQTFVAIATAGISAVGGTPINNLVASNNQSASNLVSNDARNAASFGTSLSATISMVGGTPITNMVSATMSFASQKTAFNTITEFGGLIPALGGGNPFAAGVLSRGGWNVGGVELAASLGWEFLKPAAAGPVEGSDGPIVGSQVPDEAMALPGKLAKAVGRPSLTEQLRNLNRDGQQSDAKALVALLAGKGRAA
>NZ_LN997848.1|WP_082700719.1|2712856_2714554_+|TolC-family-protein
MNRGKLTMVDVKRAGRLLASASLVALLAACAVTPAPFTADELKTQAAADRDVMFKGGEPLSGPLSVSEAIARALKYNLDKRSKMMEEALALGQTDLDRWDMLPKLTANAGYSYRSEPNATNSLNTTTGQRGSDYSYSADQRTKTADLTMSWNLLDFGVTYYTAKANADRVLVATERRRKAVHNLVTEVRFAFWRAAAYQVLSGEVNRAVAEAKDALGKARQVEKENLKAPADSLRYQKSLLETLRQLTAIQQELSTAQIELAALINVPPGTRLVLDVPAEMRVPDWAMSLERMEELAFAGNPDLLEQGYLSRIAIDETKKTMLKLLPGITFSSGRNWDGNSFQANNLWWEAGAKLSWNVMNVLSGKSQLDYAETNEEVANSKRVALRMAVLAQVHVSERQFHNAISQYQQSDELWQVDKRLFELSEARTANDATGILERVAGRASAIASQLRRFQSYAQVEQAYAKIQATIGHDLTIEKAEGGDLKSLSKAVAAGLAAWGRDGTPSEPVPAALAEVPFAVENRTPEPLTSENTKWIKGDAEAGLVEETVGTVVAHIRSLYQASGR
>NZ_LN997848.1|WP_068433893.1|2714550_2715270_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MRRLSPVWVAAVACAAPAWGQELRAQLSPRDFTTLAAEIGAKVEKIGAREGERFAKGQVLVAFDCSVNRAQLDEARAAQSAADKTLAVNRRLLELQTVGKLEADVSVAEAEKARAKVAAMSAMVSKCAVTAPFDGRVVEQKVRGQQYVQPGQALLDILDDSVLELDFLVPSKWLVWLKPGHAFQAAIDETGKTYPVKLTRVGARIDPVSQTVRVAGAIGGHFPELTAGMSGKVLLAPPP
>NZ_LN997848.1|WP_068433894.1|2715286_2716597_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MEIEAGTALRLARLLDVEGSILRAADAAEIAFVAVNDAHSLVPYRQAVLWRLGKGVQAVSGLALPDRNAPFLLWMEAVCRHLSSRAEAATLTAADLPDDLAGQWGEWLPPHLLWLPLGDGAALIYAAEAEWHDGDVALLARLGQAAGASLARFHRPSPVANALARLKSSRKRQILAVGLLGLSLFPVTGSVLAPADMVPAHPLVVRSPLDGVVDRIHVRPNEAVTEGKPLFDLDATQLSGRLDVARQQQATAEAEYRQAAQAQVFDSKAKVQVAILAGRAEEKAAEAKWLESQLERIRVKSPGPGIAVLDDPSDWIGRPVVVGEKVMLVADETDTEVEAWLSVADAGEARPGARLTLFLNSRPLSPVRAVVRSVAYEPSARPDATLAHRVRAFLVDAQEKPRLGLKGTARIDGDTVPLVWWLFRKPLVAIRQFVGF
>NZ_LN997848.1|WP_068433896.1|2716600_2718703_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MAAVAILPPLREELTVHPGLRGADGAPTWTLHDPLRNQFFRLSWPAFEMLSRWHLGEPGAVAEQVRHETTLEVEAEDVADMVDFLARGQLLQPAGPEHTRRLLAIARSSRTSWAEWLLHHYLFFRVPLVRPDRMLEFLLPWVAWLGGPAFRLASVAALLAGVLLVGRQWNVFATTLVDQFSITGLAAFGVALGLAKIVHELGHALTAKAFGLRVPTMGVAFLVLMPVLYTDVNEAWKLPDRRRRLLIGGAGVLSELTLAAWATLAWALLPDGTGRQMAFTLAATTWISSLLINLSPFMRFDGYFLLADALDMPNLHNRAFALARWRLREILFGLGEPEPEQVAPGRRGFLVVFAWAVWIYRLSLFLGIAVLVYHFFIKVVGILLFAVEIGWFVIRPMAAEIKEWGERADAIKASRWSRWTLGGAGLLVLLALVPWNGRVSAPAMLKAAGHVVLYPPGPAILKSVGVRDETWVEAGSVLAVLDNPEIDYRLVQAARRMGVLKYELSSVGFEDSFRDRSQAIARELEAVQAEHAALLRDKARLTLKAPIAGWVSDTSPNLFQGQWLNQREALMAVRAPGAIVEAYVAEDDLPRIRPGAKALFLAEGARAGLPAAIVEIDRTAVRGLADPALAVQYGGTVPARFVDKALVPDVALYRVRLSVAGEASEPVMQRGEVHLDGEGRSVVERLLRAAATVVIREWGV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LN997848_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN997848_2

2696497-2696696

Orphan

Consensus_repeat	Method
ACCGGCACCGGCAACGACGCGGT	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_LN997848_2

>merge|NZ_LN997848|2|2696497-2696696|CRISPRCasFinder
ACCGGAACCGGCAACGACAAGATTCACATCGACGGCATCGCCAACGGCGGTTCCATCGTCACCGGCGCCGGCGACGACGTGGTGGTCATCGACCACGGCATCAATGGCGGCAAGGTCGACATGGGCAGCGGCAACGACGCGGTCTATGTGTCCGGCAACATCTACGCCACCATCGACGGCGGCGCCGGCACCGACTCGAT

>NZ_LN997848|2|2|2696497-2696696|CRISPRCasFinder
ACCGGAACCGGCAACGACAAGAT	TCACATCGACGGCATCGCCAACGGCGGTTCCATCGTC
ACCGGCGCCGGCGACGACGTGGT	GGTCATCGACCACGGCATCAATGGCGGCAAGGTCGAC
ATGGGCAGCGGCAACGACGCGGT	CTATGTGTCCGGCAACATCTACGCCACCATCGAC
GGCGGCGCCGGCACCGACTCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN997848.1\|WP_172821920.1\|2707253_2712851_+\|DUF4347-domain-containing-protein	unknown	unknown	gnl\|CDD\|372982
NZ_LN997848.1\|WP_068433879.1\|2684216_2684627_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|106506
NZ_LN997848.1\|WP_156428719.1\|2680353_2683956_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_LN997848.1\|WP_068433887.1\|2703899_2704433_+\|nucleoside-2-deoxyribosyltransferase	unknown	unknown	gnl\|CDD\|377443
NZ_LN997848.1\|WP_068433872.1\|2677264_2678185_-\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|183829
NZ_LN997848.1\|WP_068433894.1\|2715286_2716597_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_LN997848.1\|WP_068433866.1\|2673279_2673945_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_156428720.1\|2684637_2684781_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_068433896.1\|2716600_2718703_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|100080
NZ_LN997848.1\|WP_068437772.1\|2704383_2705760_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
NZ_LN997848.1\|WP_068433864.1\|2671891_2673190_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NZ_LN997848.1\|WP_156428718.1\|2674061_2676212_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_LN997848.1\|WP_156428858.1\|2678271_2679351_-\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|379231
NZ_LN997848.1\|WP_082700492.1\|2702707_2703553_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_LN997848.1\|WP_068433870.1\|2676214_2677258_+\|TRAP-transporter-substrate-binding-protein-DctP	unknown	unknown	gnl\|CDD\|270395
NZ_LN997848.1\|WP_082700719.1\|2712856_2714554_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_LN997848.1\|WP_068433889.1\|2705906_2706788_-\|tail-fiber-protein	unknown	unknown	gnl\|CDD\|377845
NZ_LN997848.1\|WP_068433874.1\|2679431_2680028_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_LN997848.1\|WP_068433893.1\|2714550_2715270_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_LN997848.1\|WP_068433885.1\|2703582_2703885_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236038

Protein	Function_ID	Function_description	E-value
NZ_LN997848.1\|WP_172821920.1\|2707253_2712851_+\|DUF4347-domain-containing-protein	gnl\|CDD\|372982	pfam14252, DUF4347, Domain of unknown function (DUF4347). This domain family is found in bacteria and eukaryotes, and is approximately 160 amino acids in length. There are two completely conserved residues (C and G) that may be functionally important.	4.93169e-56
NZ_LN997848.1\|WP_068433879.1\|2684216_2684627_+\|PAS-domain-containing-protein	gnl\|CDD\|106506	PRK13560, PRK13560, hypothetical protein; Provisional.	9.96852e-20
NZ_LN997848.1\|WP_156428719.1\|2680353_2683956_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_LN997848.1\|WP_068433887.1\|2703899_2704433_+\|nucleoside-2-deoxyribosyltransferase	gnl\|CDD\|377443	pfam05014, Nuc_deoxyrib_tr, Nucleoside 2-deoxyribosyltransferase. Nucleoside 2-deoxyribosyltransferase EC:2.4.2.6 catalyzes the cleavage of the glycosidic bonds of 2`-deoxyribonucleosides.	5.14331e-42
NZ_LN997848.1\|WP_068433872.1\|2677264_2678185_-\|2-dehydropantoate-2-reductase	gnl\|CDD\|183829	PRK12921, PRK12921, oxidoreductase.	4.36279e-123
NZ_LN997848.1\|WP_068433894.1\|2715286_2716597_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.66948e-10
NZ_LN997848.1\|WP_068433889.1\|2705906_2706788_-\|tail-fiber-protein	gnl\|CDD\|377845	pfam07484, Collar, Phage Tail Collar Domain. This region is occasionally found in conjunction with pfam03335. Most of the family appear to be phage tail proteins; however some appear to be involved in other processes. For instance a member from Rhizobium leguminosarum may be involved in plant-microbe interactions. A related protein MrpB is involved in the pathogenicity of Microcystis aeruginosa. The finding of this family in a structural component of the phage tail fibre baseplate suggests that its function is structural rather than enzymatic. Structural studies show this region consists of a helix and a loop and three beta-strands. This alignment does not catch the third strand as it is separated from the rest of the structure by around 100 residues. This strand is conserved in homologs but the intervening sequence is not. Much of the function of phage T4 appears to reside in this intervening region. In the tertiary structure of the phage baseplate this domain forms part of the 'collar'. The domain may bind SO4, however the residues accredited with this vary between the PDB file and the Swiss-Prot entry. The long unconserved region maybe due to domain swapping in and out of a loop or reflective of rapid evolution.	1.98451e-14
NZ_LN997848.1\|WP_068433896.1\|2716600_2718703_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|100080	cd06159, S2P-M50_PDZ_Arch, Uncharacterized Archaeal homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group appears to be limited to Archaeal S2P/M50s homologs with additional putative N-terminal transmembrane spanning regions, relative to the core protein, and either one or two PDZ domains present.	8.74567e-08
NZ_LN997848.1\|WP_068437772.1\|2704383_2705760_-\|PAS-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	2.17111e-67
NZ_LN997848.1\|WP_068433864.1\|2671891_2673190_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_LN997848.1\|WP_068433885.1\|2703582_2703885_+\|hypothetical-protein	gnl\|CDD\|236038	PRK07521, flgK, flagellar hook-associated protein FlgK; Validated.	0.00021152
NZ_LN997848.1\|WP_156428858.1\|2678271_2679351_-\|FUSC-family-protein	gnl\|CDD\|379231	pfam13515, FUSC_2, Fusaric acid resistance protein-like.	8.32994e-19
NZ_LN997848.1\|WP_082700492.1\|2702707_2703553_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.10076e-62
NZ_LN997848.1\|WP_068433870.1\|2676214_2677258_+\|TRAP-transporter-substrate-binding-protein-DctP	gnl\|CDD\|270395	cd13677, PBP2_TRAP_SBP_like_6, Uncharacterized substrate-binding protein of the Tripartite ATP-independent Periplasmic transporter family; the type 2 periplasmic-binding protein fold. This subfamily includes uncharacterized periplasmic substrate-binding proteins similar to TRAP transport systems such as SiaP (a sialic acid binding virulence factor) and TeaA (an ectoine binding protein). TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process and a smaller membrane of unknown function. The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.30682e-103
NZ_LN997848.1\|WP_082700719.1\|2712856_2714554_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	5.81012e-18
NZ_LN997848.1\|WP_068433874.1\|2679431_2680028_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	3.24903e-43
NZ_LN997848.1\|WP_068433893.1\|2714550_2715270_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.80983e-29
NZ_LN997848.1\|WP_156428718.1\|2674061_2676212_+\|HAMP-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.73215e-50

>NZ_LN997848.1|WP_156428720.1|2684637_2684781_-|hypothetical-protein
MLEEWIRNVPLTLVERIVADRKAQGTPIWSLASIELMRRTQETCKAA
>NZ_LN997848.1|WP_068433879.1|2684216_2684627_+|PAS-domain-containing-protein
MSGITQPPWHILTDTDLVAALMDVIPHPIFFKDREGRYLGCNSHFCQMLGYGHDEVVGKTVFEIAPSNLAQVYHEADIKLMETGGTQCYASSVKYGDGLTRRGVFFKSVFHDKAGVAAGLVGMFYPMEFMLHVIDM
>NZ_LN997848.1|WP_156428719.1|2680353_2683956_-|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MADRALITVDGNEACASVAYRVSEVAAIYPITPSSTMGELADQWASEGRKNIWGVVPDVAEMQHEGGAAGAVHGALQAGSLATTFTASQGLLLMIPNMYKIAGELTSFCMHVTARTVATHGLSIFGDHSDVMACRQTGFGLLASGSGQEAHDMAAIAHSATLKARVPFLHFFDGFRTSHEVTKIEELNDEDLLALLDADSIAAHRARALSPDHPTLRGTAQNPDTFFQMQEARNPWYEACPGIVQQEMDRYAKLTGRAYKLFDYFGHPEAERVVIIMGSGAETVHETVTALAAKGEKVGVLKVRLYRPFSIDAFVSALPTSVRAIAVLDRCKEPGAIAEPLYLDILAALAEAKATGNRATAADPVVIGGRYGLASKEFTPGMAKAVFDELARSKPKRRFTVGITDDVTHLSLEPDSSFKLVQPKVKSAVFFGLGADGTVGANKNSIKIIAENAGFQGQGYFVYDSKKSGAITISHLRFSPEPIQSAYLLDSGDADFVACHHFVFLDKYEVLRYAAKGATFLLNSPHPADEVWTHLPREVQQEIIDKQIKVHVIDARKVALATGMGNRINTIMQTCFFALSGVLPRDEAIGHIKKAIEKTYGRKSEKLVAKNFEAVDETLHHMHEVKIPAEATSNRSLPPIVPEDSPDFVKRVSALMLANHGDKLPVSAFPVDGVWPTGTARFERRNIAAEIPVWDEGPCIQCNKCALVCPHAAIRAKVASPADMEAAPASFKRMDYRGNEFKGDAYIIQVAPEDCTGCTLCVKVCPGKDKKDPNRLALRMEAKDPILETEKANWAFFVDLPEVNKEKLGTPTVKTAQLLQPLFEFSGACLGCGETPYIKLMTQLWGDRLMIANATGCSSIYGGNLPTTPYTQNADGRGPAWANSLFEDNAEFGFGFRLAVDQHKNQAKLLLAALTATGQVPEKLANEIALAPQGSEVEIAVQRNRILELRKVLSGLKSADARLLEQVADYLVEKVVWIVGGDGWAYDIGYGGLDHVFASGKNVNILVMDTEVYSNTGGQQSKATPIGASAKFAIAGKTLPKKDLGMMAMAYEDVYVANVAFGSKDVQTMRAFQDAVSYPGVSLIVAYSHCIAHGYDLAHGLDQQKMAVEAGYWPLYRWDPRKMGSGESPLTLDSKEPNGKLYDFMKGEARFQMVERADPERYRKLVDSAESQLRRRFAMLRRFAGLPDAPPPAGGKEAAE
>NZ_LN997848.1|WP_068433874.1|2679431_2680028_-|NAD(P)H-dependent-oxidoreductase
MSQHQIAIIVGSLRKDSFNRKLADAIVKLAPPEFSFQHTQIGGLPLYNQDDDLTPVPAVSRLRAEIAAAHGLLFVTPEYNRSIPGVLKNALDHGSRPYGKSVWAGKPAGIMGCSPGAIGTSLAQQHLRNVLAYLDVPTLGQPEAFIQIKDGFFDADGAIANPDTRKFLQGWMDKYVSWVENLLRDKDGAYLRARFGGS
>NZ_LN997848.1|WP_156428858.1|2678271_2679351_-|FUSC-family-protein
MLAAIRVFIRSELAQLLTVHKSDRPWQMPFAAAMSSGLPIAVGAYFDHMSYGLISSLGGIVFLYLPATSLHHRMITLMACSFGLAACYTLGMLSQLITPLMVPVLAFIAALVTMVCRFYQIGPPGSLFFIMAAAIGAYSPVDLLQVPQHVGLLTMGCLLAGVIALLYSMHILRLRAPQPVAPPPPATFDYVVFEPVVIGAFVGISLALGQALNLPRPYWVPVSCLAVIQGMSLRAVWNRQVQRVAGTIFGLLISWGLLALPLDRWSIFMMMTSLVFVIETMVTRHYGVAVIFITPLTLFLAEAASFGHTSSAALIQARFIDTILGCLVGLVGGICLHTPRFRDVASRQIRRLIPSRMLP
>NZ_LN997848.1|WP_068433872.1|2677264_2678185_-|2-dehydropantoate-2-reductase
MRILVLGAGATGGYFGGRLAEAGADVTFLVRPKRARLLAEKGLRIQSPHGDAAFPVKTVTADTLSGHWDMVLLSCKAYDLDESIKAIAPAVGPESAVLPILNGLAHYGPLDAAFGPGRVIGGLCHIFSTLGADGEIVHMNNINRITFGERSGGTSARTEALAKAFGPAKCETRHSPEIMQEAWEKYVLLAPLAGMTCLMRASVGTIMATGDGEAIMREMFEECAAVASHAGHAPRPEARDLALGFLTQKGSAMTASMMRDLEAGGPTEGEHIVGDMLRRARAAGLAAPLLRTALTHLQAYEIRRKG
>NZ_LN997848.1|WP_068433870.1|2676214_2677258_+|TRAP-transporter-substrate-binding-protein-DctP
MRPLSAIVALVLLAALPARAGEGDKPAPPREIFLAHTQAQKSSANPTAAMAAEFKRQVERLTEGRVKVGIFPAGQLGGNREIARVIADNVVQTGFVTIGGVVPAYPPLAVTQIPFVFSSQEAAQAAFDGPFGRLLGEEIERRTGMMVLGYGDSGGMTALTNARRPIHRPEDMRGLKFRVIPGFKSQETMIRSLGAVPVPISSREELPALSAGVADGQMNTPLAILAGRFDEVQKYVTLTEHLYAPPLWLFNRKAFDALAPDEQQAVRQAADAALAAGRKLAAEIEGSERGISALYRRMTVTRLSAEERDAFRRVVQPVIIAEVQADLDEEGRALMGEFLKAAAPAGK
>NZ_LN997848.1|WP_156428718.1|2674061_2676212_+|HAMP-domain-containing-protein
MSTRSKRPRIRLRVGIAAMFLGIMLPLTALMTTVLYRQNSHLAADLAQNAMDGATRDVVSGVRNLLVPMARVVDLSTAFGKAEGEKLRRVETLRPLIDTLEAFPDLYALFFGFAKDGAFYEVIRLPPPGGKGLLDRKPPPEAKFALRIIDTVEGEATDSWIYITRWGNVVGVERAPKVAYDPRTRPWYKSAAGTQGVATSGIHVFSSIGKPGLTLSQRLMTDDGALIGVFAADLLTDTLSRFLAERAVGTKGRIFILDEDDRLLGYPDAEQSLVRGDKGLEIARIDQIADRVVADAARLRKDLGSRFKAELGPERDTYLVSFSPFPDEFGKHWTIGVVAEEGEFIAPLRRASIIILIIGTAFLVLAGAGVAWASRLLTRPIETLIGEVRHIEALDFSSTAVVRSSVIEVHALAAAIERMKTAMRSFAAYVPKDLVRTIMASSGIPTIDGERRPLTILFTDLQGFTQTSEFMAPEDVAHRLSIYFEMMSAAIIGSRGTIDKFIGDAIMAFWNAPSLDEDHVANACRAVLACRVLSEELNRDLVANRFPPMPTRFGLHSGVAVVGNVGSNDRMQYTVLGAEVNLASRIEGLNKMFGTSMLVTGAVEKQVRDRFVFRPLGVVAPAGVTLPVPVFELVASLEEGSTLAATEEQMAACADWNRAMKLFFARDWSAACPAFRDYLAARGEDGPARFFLDLAERYAADPPDEAWDGVLHFEGK
>NZ_LN997848.1|WP_068433866.1|2673279_2673945_+|hypothetical-protein
MILTPIDHTGLAGLKSEFEAALAEDPLALAVFRRVTALVPDGDLLTLSTEPEHRKGAVELCRRFGFKILEMSPQEHFTWDGEGVAVHLEPSVLIHEVGHYQLSSPERRKVLDFGLGAGPETGRKAEADAVQSLFLPERDVEEGLCSLLGILWEAELGQPAVLAFLEQNWMEGGSNLQNVGHFRKVVRWLHEMGLIDDTGAPTMGVREEGDDTFFTRWYADC
>NZ_LN997848.1|WP_068433864.1|2671891_2673190_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MDRIRIIGGTPLKGTITIGGAKNAALALMPACLLTEETLALSNLPHLVDITTMANLLAQHGVMMALNGNASNGGHTGRVLELTAATIGNTTAPYDLVRKMRASVLVLGPLLARCGEARVSLPGGCAIGTRPVDLHLKALEQMGAKIELDGGYIVASVEGRLKGAHIIFPQVTVGGTENILMAATLAEGETVIANAAREPEITDLAECLVAMGAKIDGIGTGTLKVQGVERLHGAEYSVVPDRIETGTYAVAAAITRGDIELVGARFDLMESVNKVLTECGVHVEETPRGMRVRADQGEITGVDIMTEPYPGFPTDMQAQLMALMSTAKGASMITETIFENRFMHVPEMTRMGARINVHGSSAIVRGAPKLSGAQVMATDLRASVSLVLAALAAEGETIVNRVYHLDRGYERVEEKLAACGAKIERLKDGVAE
>NZ_LN997848.1|WP_082700492.1|2702707_2703553_+|serine/threonine-protein-kinase
MEAGEHIGRYQVARHLIDTAFSRLYLCTDPQLGRPVVVKAFAMDAAKPEPPFSRAEWMRRFIMEGRIMAGLDHPHILPVHETGRLEDGSPFMVLPFMRANLPRLIGFDVAEDGMAEDELPQALDVGQSRFILLQVLAALAYLHRRGIVHRDIKPANVLLTARQGGIAKLCDFGFARLGTASDVPPRAWIGTLDYISPEQRAGAGGVGPAADIYSIGALAWRLLAGRLPGPEDGRPPLSELVPQAPPGLVGWVEAAMAADPEKRPSAEDSLRMLATGMRLGA
>NZ_LN997848.1|WP_068433885.1|2703582_2703885_+|hypothetical-protein
MISSIASTTLLSGLAAQSRVAQKAADNIANVTTPDYPAQRGQVVSASPAGARYVPLPPEGEVDLLREVVDLGQAKQAYILAARTFSRIARTEKDALDVLA
>NZ_LN997848.1|WP_068433887.1|2703899_2704433_+|nucleoside-2-deoxyribosyltransferase
MTYKPKAYLAGPAVFHPAAKALLDYLVEMCGQHDLEGVAPFEPQADDLKLPPAELAAMIRHGNIERIRECDVVIACVSPFRGPGACPGTTWEMGYAEALGKPVIAWSEDMRPYKERVPHDRDEDGRLFCRQHGMVVEDFGLVENLMYAAQPAEVLSDLEAAFKRARQLAAAPRPAAG
>NZ_LN997848.1|WP_068437772.1|2704383_2705760_-|PAS-domain-containing-protein
MGVAWRITGIYTAVGLSWIFLSSMAVWIGVGEPPGLASLLEMGKGCAFILVTAFMLLVLLRRWEGELNRRGEALIESNRELTELNTRLSGIMRGSQDLIAAWDRNKRLTAFNPRYQAVCWDFFERDVKVGMSAEEVFGHVPEKYRLFSECWDRTLAGESFVQLQSLDVDGDMAWFETSYGSLPGPDGLPSGGFHIVRDVTDRVRAEEDRRTHAEKLAKTVETLTEANSELERFAYVASHDLQEPLRTIACFAQLLERHYGQTLDDRGRQYVELVTSGAIRMHSLINDLLAYSRTTRSEGRIEIVSAESACQSALNNLREAIDSGGAEVIVEPLPEVSADSVMLIQIFQNLIGNAIKYRKTGIAPHIRVSAQRQERHWQFSVSDNGIGFDPSEQDVFELFRRLHPHSSYTGTGVGLAICKWIVNRLGGHIWVESTPGAGSTFRFTLPLGEAQRPVAAHA
>NZ_LN997848.1|WP_068433889.1|2705906_2706788_-|tail-fiber-protein
MKKMTFSTLITGVSTLALAAILSGTGAKDAQACSGPEPYIGTVCFTAAQWCPNGYIPADGRQLTVQSNQALFSLIGYYYGGNNTSIFNVPDLRGRSPIGYNPSTINTGGTVISPNTYASLRGSETATLSTSNVAPHIHPATFTGTGGGGSGPMAASGPVTLPVTVSVPAQNISVSGSLKIGSSTAAGAQAISNGAVMTKAGGGQGAIYAPSTTTADTNIGPSQTFSGSTSAAPATGTVTGTVTLPVTGATGITGGTVSVGPNSNSATPFHIVPPQSVLTACIANEGLYPPRPN
>NZ_LN997848.1|WP_172821920.1|2707253_2712851_+|DUF4347-domain-containing-protein
MTKLPDPASLRRQGGGAGRFSSRVPLVMALEPRLMFDGAAAVDAAHVVAEAAIKAAPAPVVIRDADPSKDNGKKEVVFVDTRVADYKTLEAGIRDGVAIVEIDGAADGLAQMAQWAETHSGYDAIHVLSHGSEASLRLGATTLTVAGLSDATVQVELSVIGQALAADGDILVYGCSIASGLDGQAFISALASATGADVAASSDTTGAAAQGGNWVVERSVGDVAAASLGIDGMRDYGGALTSATITFESSNGSIAGDGTTSVTYTHANITLTFTAKDDANTNAAQIALGSVMGAAYNGAEDLYFVNDGSGKGGSFTVTAGGGKIFDLTSFVFSNQNGNGLETFSITTSKGGSFTFSAGGTGVTKQSISVNSDVSNYQGITYFTITAPTGGAFMEIDDIVLDNIMSAPSFTSGASASFAENASGTVYTAAANASAGGGTVSYSITGGADQAKFSINSSSGALTFVSSPNYESPTDSGANNVYDVVITATDSNGSATKAVAVTVTNVNEAPSFTSGTTANFAENGTGTVYTATSSDPDSGATASYSIVGGADQAKFSINSSSGVLTFQSAPNYENPTDSDTNNTYVVTLRVSDGTNTVDQTVTVTVTNVNEAPTGVNDTGSATEAGGLSNATGGSNATGNVLTNDTDPDAGATKTVTAIRSGNTEGAGTAGTVGQALAGAYGSLTLNSDGSFTYVVLDSDSSVQALAAGQTLTDSYNYTVSDGTNTDIAVLTITINGANDLPVLGGTFTTAGTVNDNATTTPFSAVTFTDVDAGAVSVAITYTAANGTFASGGGGLTGSVGSYTLSGASPAALQTLLRALVFTPTANQTAPGGTVVTTFTLTPADATGNGTADATTQVTATSINDAPVNTKPAAQTTNEDTALVFSSGNGNALSVADADTGTTLTTVVSVASGKGVISVTTGGGGTITGNGSNSVHIVGTVAQVQNALGSVSYTPTADGYGTGYATLTISSTDAHTGTLNDTDTVTINVTGIADTPSVTSSSTTPSTQTTSGLVLSRNAADGAEVTHFKITGITNGTLYKNDGTTQINNGDFITFAEGNAGLKFTPSGGSDGSFTAQASTSGADGGLGGSTINAAIAVGAAVANPTVNEDTDSGAIAITRGSGETFYKITSITGGTLYSDAGYTTQINNGDFIANAGATTNVYFRPTANRNTTTGGNGSFVLQASSASNDGGLSGSLVTSTITLAPVADTPSVASPTVNEDTDSGAIAITRAAGDGAETTHYKITGITGGTLYSDASYTTQINNGDFIASGGATTNVYFRPTANRNTTTGGNGAFTVQASKSGVDAGLGGSTATSTITLAPVADTPSVASPTVNEDTDSGAIAITRAAGDGAETSHYKITGITGGTLYSDAGYTTQISNGDFIASGGATTNVYFRPTANRNSTTGGNGAFTVQASKSGVDAGLGGSTATSTITLTAIADTPSVTAASTAPSTQTTSGLVLSRNAGDGTETTHFKITGITNGTLYKNDGTTQINNGDFITFAEGNAGLKFTPSGSSAGSFTAQASKAANDGGLGGSTVNAAITVNRAPVAGGAALTLTDGKVGSAYSFSLPAGTFTDADNDTLSYTVSGLPAGLSMSTAGVISGNPTTPVDSVTLTFTATDPSNATATKTATLKIKAADVVAPPPQQQASSPPPPPTPPLPSEPPSAPLVTTVRANQTFVAIATAGISAVGGTPINNLVASNNQSASNLVSNDARNAASFGTSLSATISMVGGTPITNMVSATMSFASQKTAFNTITEFGGLIPALGGGNPFAAGVLSRGGWNVGGVELAASLGWEFLKPAAAGPVEGSDGPIVGSQVPDEAMALPGKLAKAVGRPSLTEQLRNLNRDGQQSDAKALVALLAGKGRAA
>NZ_LN997848.1|WP_082700719.1|2712856_2714554_+|TolC-family-protein
MNRGKLTMVDVKRAGRLLASASLVALLAACAVTPAPFTADELKTQAAADRDVMFKGGEPLSGPLSVSEAIARALKYNLDKRSKMMEEALALGQTDLDRWDMLPKLTANAGYSYRSEPNATNSLNTTTGQRGSDYSYSADQRTKTADLTMSWNLLDFGVTYYTAKANADRVLVATERRRKAVHNLVTEVRFAFWRAAAYQVLSGEVNRAVAEAKDALGKARQVEKENLKAPADSLRYQKSLLETLRQLTAIQQELSTAQIELAALINVPPGTRLVLDVPAEMRVPDWAMSLERMEELAFAGNPDLLEQGYLSRIAIDETKKTMLKLLPGITFSSGRNWDGNSFQANNLWWEAGAKLSWNVMNVLSGKSQLDYAETNEEVANSKRVALRMAVLAQVHVSERQFHNAISQYQQSDELWQVDKRLFELSEARTANDATGILERVAGRASAIASQLRRFQSYAQVEQAYAKIQATIGHDLTIEKAEGGDLKSLSKAVAAGLAAWGRDGTPSEPVPAALAEVPFAVENRTPEPLTSENTKWIKGDAEAGLVEETVGTVVAHIRSLYQASGR
>NZ_LN997848.1|WP_068433893.1|2714550_2715270_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MRRLSPVWVAAVACAAPAWGQELRAQLSPRDFTTLAAEIGAKVEKIGAREGERFAKGQVLVAFDCSVNRAQLDEARAAQSAADKTLAVNRRLLELQTVGKLEADVSVAEAEKARAKVAAMSAMVSKCAVTAPFDGRVVEQKVRGQQYVQPGQALLDILDDSVLELDFLVPSKWLVWLKPGHAFQAAIDETGKTYPVKLTRVGARIDPVSQTVRVAGAIGGHFPELTAGMSGKVLLAPPP
>NZ_LN997848.1|WP_068433894.1|2715286_2716597_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MEIEAGTALRLARLLDVEGSILRAADAAEIAFVAVNDAHSLVPYRQAVLWRLGKGVQAVSGLALPDRNAPFLLWMEAVCRHLSSRAEAATLTAADLPDDLAGQWGEWLPPHLLWLPLGDGAALIYAAEAEWHDGDVALLARLGQAAGASLARFHRPSPVANALARLKSSRKRQILAVGLLGLSLFPVTGSVLAPADMVPAHPLVVRSPLDGVVDRIHVRPNEAVTEGKPLFDLDATQLSGRLDVARQQQATAEAEYRQAAQAQVFDSKAKVQVAILAGRAEEKAAEAKWLESQLERIRVKSPGPGIAVLDDPSDWIGRPVVVGEKVMLVADETDTEVEAWLSVADAGEARPGARLTLFLNSRPLSPVRAVVRSVAYEPSARPDATLAHRVRAFLVDAQEKPRLGLKGTARIDGDTVPLVWWLFRKPLVAIRQFVGF
>NZ_LN997848.1|WP_068433896.1|2716600_2718703_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MAAVAILPPLREELTVHPGLRGADGAPTWTLHDPLRNQFFRLSWPAFEMLSRWHLGEPGAVAEQVRHETTLEVEAEDVADMVDFLARGQLLQPAGPEHTRRLLAIARSSRTSWAEWLLHHYLFFRVPLVRPDRMLEFLLPWVAWLGGPAFRLASVAALLAGVLLVGRQWNVFATTLVDQFSITGLAAFGVALGLAKIVHELGHALTAKAFGLRVPTMGVAFLVLMPVLYTDVNEAWKLPDRRRRLLIGGAGVLSELTLAAWATLAWALLPDGTGRQMAFTLAATTWISSLLINLSPFMRFDGYFLLADALDMPNLHNRAFALARWRLREILFGLGEPEPEQVAPGRRGFLVVFAWAVWIYRLSLFLGIAVLVYHFFIKVVGILLFAVEIGWFVIRPMAAEIKEWGERADAIKASRWSRWTLGGAGLLVLLALVPWNGRVSAPAMLKAAGHVVLYPPGPAILKSVGVRDETWVEAGSVLAVLDNPEIDYRLVQAARRMGVLKYELSSVGFEDSFRDRSQAIARELEAVQAEHAALLRDKARLTLKAPIAGWVSDTSPNLFQGQWLNQREALMAVRAPGAIVEAYVAEDDLPRIRPGAKALFLAEGARAGLPAAIVEIDRTAVRGLADPALAVQYGGTVPARFVDKALVPDVALYRVRLSVAGEASEPVMQRGEVHLDGEGRSVVERLLRAAATVVIREWGV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LN997848_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN997848_3

3170844-3170920

Orphan

Consensus_repeat	Method
ATCGGCTCCACGGTCCAGGGCTACGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN997848_3

>merge|NZ_LN997848|3|3170844-3170920|CRISPRCasFinder
ATCGGCTCCACGGTCCAGGGCTACGATGCAACCACCCTCAAGTCAGCTGCTATCGGCTCCACGGTCCAGGGCTACGA

>NZ_LN997848|3|3|3170844-3170920|CRISPRCasFinder
ATCGGCTCCACGGTCCAGGGCTACGA	TGCAACCACCCTCAAGTCAGCTGCT
ATCGGCTCCACGGTCCAGGGCTACGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN997848.1\|WP_068434721.1\|3161989_3162853_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|225720
NZ_LN997848.1\|WP_068434715.1\|3159770_3160421_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_068434750.1\|3177303_3178395_-\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|236022
NZ_LN997848.1\|WP_068434747.1\|3174172_3174943_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293837
NZ_LN997848.1\|WP_068434730.1\|3164902_3165511_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222807
NZ_LN997848.1\|WP_068434754.1\|3179035_3180205_-\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_LN997848.1\|WP_068434738.1\|3171286_3172690_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293932
NZ_LN997848.1\|WP_068434749.1\|3175720_3177271_-\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237012
NZ_LN997848.1\|WP_156428745.1\|3166591_3169951_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222842
NZ_LN997848.1\|WP_068437868.1\|3162935_3163262_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_068434740.1\|3172689_3173187_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_068434742.1\|3173200_3173464_+\|DUF2829-domain-containing-protein	unknown	unknown	gnl\|CDD\|378590
NZ_LN997848.1\|WP_068434727.1\|3163889_3164555_-\|DUF932-domain-containing-protein	unknown	unknown	gnl\|CDD\|377596
NZ_LN997848.1\|WP_068434752.1\|3178391_3179030_-\|dTMP-kinase	unknown	unknown	gnl\|CDD\|184429
NZ_LN997848.1\|WP_068434717.1\|3160410_3161232_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_LN997848.1\|WP_068434728.1\|3164576_3164891_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_068434719.1\|3161246_3161915_-\|transglutaminase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376628
NZ_LN997848.1\|WP_068434725.1\|3163354_3163657_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_068434745.1\|3173463_3173820_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997848.1\|WP_068434748.1\|3174939_3175719_-\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|223162

Protein	Function_ID	Function_description	E-value
NZ_LN997848.1\|WP_068434721.1\|3161989_3162853_-\|peptidoglycan-binding-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	2.93704e-41
NZ_LN997848.1\|WP_068434730.1\|3164902_3165511_+\|hypothetical-protein	gnl\|CDD\|222807	PHA00662, PHA00662, hypothetical protein.	9.31932e-16
NZ_LN997848.1\|WP_068434754.1\|3179035_3180205_-\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	5.68318e-121
NZ_LN997848.1\|WP_068434738.1\|3171286_3172690_+\|hypothetical-protein	gnl\|CDD\|293932	cd12872, SPRY_Ash2, SPRY domain in Ash2. This SPRY domain is found at the C-terminus of Ash2 (absent, small, or homeotic discs 2) -like proteins, core components of all mixed-lineage leukemia (MLL) family histone methyltransferases. Ash2 is a member of the trithorax group of transcriptional regulators of the Hox genes. Recent studies show that the SPRY domain of Ash2 mediates the interaction with RbBP5 and has an important role in regulating the methyltransferase activity of MLL complexes. In yeast, Ash2 is involved in histone methylation and is required for the earliest stages of embryogenesis.	2.01019e-10
NZ_LN997848.1\|WP_068434749.1\|3175720_3177271_-\|methionine--tRNA-ligase	gnl\|CDD\|237012	PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed.	0
NZ_LN997848.1\|WP_156428745.1\|3166591_3169951_+\|hypothetical-protein	gnl\|CDD\|222842	PHA01972, PHA01972, structural protein.	8.6274e-08
NZ_LN997848.1\|WP_068434747.1\|3174172_3174943_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293837	cd16279, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. Some members of this subgroup are named as octanoyltransferase (also known as lipoate-protein ligase B).	1.65883e-97
NZ_LN997848.1\|WP_068434742.1\|3173200_3173464_+\|DUF2829-domain-containing-protein	gnl\|CDD\|378590	pfam11195, DUF2829, Protein of unknown function (DUF2829). This is a uncharacterized family of proteins found in bacteria and bacteriphages.	1.75246e-31
NZ_LN997848.1\|WP_068434727.1\|3163889_3164555_-\|DUF932-domain-containing-protein	gnl\|CDD\|377596	pfam06067, DUF932, Domain of unknown function (DUF932). Family of prokaryotic proteins with unknown function. Contains a number of highly conserved polar residues that could suggest an enzymatic activity.	5.89816e-09
NZ_LN997848.1\|WP_068434752.1\|3178391_3179030_-\|dTMP-kinase	gnl\|CDD\|184429	PRK13973, PRK13973, thymidylate kinase; Provisional.	1.17416e-93
NZ_LN997848.1\|WP_068434717.1\|3160410_3161232_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	2.22835e-142
NZ_LN997848.1\|WP_068434750.1\|3177303_3178395_-\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|236022	PRK07471, PRK07471, DNA polymerase III subunit delta'; Validated.	1.43654e-174
NZ_LN997848.1\|WP_068434719.1\|3161246_3161915_-\|transglutaminase-domain-containing-protein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	1.61077e-19
NZ_LN997848.1\|WP_068434748.1\|3174939_3175719_-\|TatD-family-hydrolase	gnl\|CDD\|223162	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair].	5.41141e-117

>NZ_LN997848.1|WP_156428745.1|3166591_3169951_+|hypothetical-protein
MDSAAGSQGRYSIANDWINVSIENARLGSDGSPDGFAKAFTHEVFHRALNFTLDVERSKWLSIWRADPTGIGRSAMDMASEMVANPAISAVKMFDDLSYRLSPNEAFANSGMRFLDDVVTGRYQPGSAKTGVYGYLDDMFRRAKQVIGLAPKESQRAVANRFMDQFMQRIRQDGAMLPNADMREAIYGAFEAHGREMAINLLLDASGALQGLSAEAYIQATRQLGAEPEMRVSSIVQSADNFLDSDKLIRKETSIAPTGIGLEKWNWSPWHWAMGSVSENVRNIAERLVATPGLKLTKNMSLDAHGNVQAPQPMVRSVETSINVNWRPKLSNGLQALRESWLEQRGAGLANPNFESLKLGAKDLAAKVTGSPKPGLSFDEFKGEVARAMFSFDQHADPHVQAAAAKLRPIFDEIGETAAKEGVFSWQQRRLLRELNADLDKELGLKRTESFGLTEDRTVTLTDHTMTPHAQKLTEQIAALKAEIEHIDGGGWREDAKVKGESWFPKLLDRQTIMRNAEDYKGIVRSYFKSIGIVGDELEAAVKSHFDKVTKRTGYVDFFDDPVNSPRSAKAREWEIPASMVMNYIDTDVERILHRYVSQMGAAIEVSRAFEGHLDLKPMLDKVKLDYDAALREAGGEVSALERLNKEYVQDKEAILAMRDMIFGTHNIPADPDAFHTRAFRSMKVLNAASMLGGVVLSSLSDVARPVMTEGLTKTMRYGIDAFMMDKALYKLSANELHAAGIANELWTHTRAASFSNWNEIWYGGTKLERGIEKIGNVFSMASGLSQWTDIAKTVAGTVIGNRILDDCLLLAEGKLSAKATEDLARGGIGVKQAKAIAKMTEEHADVLTNKGWFSDGSHVSIWSAVEHMREKGGSLLANTDKWTDAEARMAFRSALYEDTNRAVVTPHIADRPLWVSTELGGILGQFKAFGMSSTQRIMMAGLQDRDAKFWGGMAAMTAAGMFANAIKDAIQRNENWFDRPWQDKLVDGMDRSGLLGSFGDINNLVERLSENQVSLNALLGDDSRKHTSSVSKWGALGPAPQQIARAFAMVGDLGRGEFGEAGSNFRRLAPLAGLWYFQPGIHALNGMATMVDGPSHGMYNPASYGMGLDAQPTFNQVH
>NZ_LN997848.1|WP_068434730.1|3164902_3165511_+|hypothetical-protein
MSSNPGPLAIDICNQASILVGCNPITSFTEGTTEALVAAAIYDTTVEAALASYPWRFATTQVALMKLSAAPVDVSYSYAYQQPSDLVLPVRCTWGGNLVTYDRVGQTIVCNSDNSGGTDVVLTYIRRVSEDQWLPHFKQGVLFDLASLFAEAVAGRQDLSQSIMARAQKAYAVARSQESQSQANTDIPTSMIIQNRFGSSSL
>NZ_LN997848.1|WP_068434728.1|3164576_3164891_+|hypothetical-protein
MAGIIASNMNLTGTFTATGNGSSAQVQPGHYNVSIWGTFVGTVVLERSFDSGTTWIQRSYDYSGTAISFTAPASVEVHEHELGVLVRVRCSAYTSGTINYRISE
>NZ_LN997848.1|WP_068434727.1|3163889_3164555_-|DUF932-domain-containing-protein
MMELEIMLTDRQFDVGTTPGYSPNQPAYYNTSARVGDTVAQVLRFRNSYNGAWSFETSFGGKRLRCLNGVWVLDSIASHRRKHTINLSVTASVEKIVSGITMFDTMRDELMQMTYTRVTSSQVEKMFRNTLAYLPRTGQDMPPYSDRTLTHLMNLWSYNADEVGANKWAAYNAATEWATHVEDTMRKTSQPHRVRSQREAKIASMLKSNEWKHLEQLPIAA
>NZ_LN997848.1|WP_068434725.1|3163354_3163657_-|hypothetical-protein
MGKKAKIEEKPLSQSHRDVIGCPVRIEIPLTSLVEARNHIRTIMQALQEADFILTHQIQNPPAPPLRGKLLDHHALMGVKSIIRSAQMTLPTRKRRVKDD
>NZ_LN997848.1|WP_068437868.1|3162935_3163262_-|hypothetical-protein
MADTDRLTRTLSLSLSGRADPSAIAALSRPEGLLDLHATDDGRAVRVSYDLRHVTLAALEQWMAANGLVLSDGLWARLRRRWLAFKDDNRRDQAAIVHQCCSVPPDNR
>NZ_LN997848.1|WP_068434721.1|3161989_3162853_-|peptidoglycan-binding-protein
MTSLQSITIAIAPNARAECKTAFADKDGALARYGVTTRLRLCHFIAQIMHETNGGTLLVENLTYTTQDQLLKIYGVGRHSAKITPDEAPSLLRNAKALAERVYGQGNPAKAAELGNTQAGDGYLFRGRGVLQTTGRSNYAKVARETGLDCVADPDLIIQAENLLSPALCHWQAANINPQADADDIVAVTKAVNGGTNGLDDRKLWYAKAWAASAEGPGPTANNAALPDLARLQTALNKAGADPRLVVDGADGPRTRRAVKAFQAAHGLAADGVVGPKTRAALETFMD
>NZ_LN997848.1|WP_068434719.1|3161246_3161915_-|transglutaminase-domain-containing-protein
MSIDPRALQPGRFIQSDNPAIVAFAQKAAQGASNRLDAAIRLYYAVRDSVLYDPYVRFNAPETYSAADVLAKGSGFCIPKAALLTACARAVGIPARIGFADVRNHLATPKLLDKNGSDVFRWHAFAEIMAEDRWVKATPAFNLALCEKFGVHPLEWDGKTDSVFHPFDKQDRRHMEYVDQHGSFWDVPFEEITATYRQYCPLMMVDDPWGTGSDFAAEAKAQ
>NZ_LN997848.1|WP_068434717.1|3160410_3161232_-|nucleoside-triphosphate-pyrophosphohydrolase
MTEKPIDRLLAIMARLRSPDGGCPWDLEQSFATIAPYTIEEAYEVAEAIEHGDMAQLKDELGDLLFQVVFYAQMARENGDFDFDAIAAAIADKMVRRHPHVFVENDGRDSAGQVEAWEETKARERAAKADGAAEPGILDGVARTLPPMTRALKLQRRAARVGFDWDRPETILDKLAEEAQEIAEEIRSDAPFDRLEDEMGDVLFVCVNLARKLNVDPERALKRANTKFERRFRHIETELKASGRTAEAATLDEMEALWQAAKTLEKSGGHGGG
>NZ_LN997848.1|WP_068434715.1|3159770_3160421_-|hypothetical-protein
MAGDWLKRIGVLAAVLLLSSCYIPDKFRSELRLSKYGDYSLTYKGDLMFAPILDDYRKNKIKPEDEAERQENIRRDLARDIAFRKIEAKGKGRFAVEYERVGRLGKVQLTSLIRRDARLISLRSMENGAIVIRANAMKPSDAQILAELGLNMEGEFRITTDGNVVKHNATQVKPFGTSKVYIWKIENPLAVMPELVMIRDVDPARPLAPRPSEINE
>NZ_LN997848.1|WP_068434738.1|3171286_3172690_+|hypothetical-protein
MLGAALLLAGDDSYSITNSARFNGTSDYLSKTLTTSATTSGSIWVKRSKLGATSPIFDNKVYFTSGDALYAFGLTSTALYRDPSAWMHIFWNGTGVYVNGTLVTGTGSYTAASVTNPRLGYDGTNYFSGHLSDFAFWNGSSASLQGGAADANGVWVPRRPSAGYSFLAFGSSGALGTDTSGNGNSFTVNGSPVQTTDTPTNNYCTFNPLSSGSVTLSKGNTAADVSTYTQLARGTIGVSVGKWYWEYKGDGSTTYLCCGVIDASRLQDTDPTAAPNGYSYYGHTGVVYNNGSSSAYGATYDNTHTIGCALDLDASPPTLTFYKNNVSQGAKTINSGVTYFPMFNEQGTYAGATFNFGATAFAYTPPSGFLALCTANMTSAAVTTSGTFTGNASADGPFVWTNGNPATLTINGNAVTFGTHADKTAGGFKLRSSSASYNTSGSNTWTATAGKRFVYSATSINNAQGNP
>NZ_LN997848.1|WP_068434740.1|3172689_3173187_+|hypothetical-protein
MALYYIPGASFPDGTPADYIDSSEGFVLNEIQYPRYYLDRSELDGTTRCTFEVCPFDGTEYLITEHRNGPVIGWVGTPRSPDEVLVLKRANARAAALAEIDRLERSITDRMWREDAVGSTALMEIKKQDENGDWVVDTDDPRTGKTATQYIAYVNSAIANIRAGL
>NZ_LN997848.1|WP_068434742.1|3173200_3173464_+|DUF2829-domain-containing-protein
MFSFSDALNHLKSGKKVARSGWNGKGMFVFLVPGSTFKVNRAPLLGIYPEGTEINYCPHIDMKTADDKIVPWLASQTDVLADDWTLV
>NZ_LN997848.1|WP_068434745.1|3173463_3173820_+|hypothetical-protein
MATALVILWAVLGGLWRRMFGGWTGLPRSICYALMAPLTLPIWLALPWGVYWPYSVIAGIGSTALCLLFFVVSLYPGGKFTDDRDVLLKYGPFGIGYVLAHRFWRDEWNRGSRLCWRP
>NZ_LN997848.1|WP_068434747.1|3174172_3174943_-|MBL-fold-metallo-hydrolase
MKVTILGCGGAAGVPTISGGWGACDPANPRNRRLRSSILVEEGETRILVDTSPDLRQQLLAANVRSVDALIYTHDHADHLHGIDDLREINRVTRKWLPVWGDVATLRTAQERFSYAFAPLEKMDDCIYRPLLEAHAVNGPFTIGGIEVIPFDQDHGYCRTLGLRFGSFAYSTDVVSLPEASFAALKGVESWVIGCLVDYDHPTHAHIAKAVEWIERVGPKRAFITHMGSRLDYEAVRRAVPAHVIPAHDGLVIEVS
>NZ_LN997848.1|WP_068434748.1|3174939_3175719_-|TatD-family-hydrolase
MLVDSHCHLDFPDFADDLDGVVGRASAAGVGVLLTIGTHITRYEQVVRVAERFDNVWASVGIHPHEAGVAPYADLDTLLRLAQHPKVVALGETGLDYYYDKSPRERQRDSFRIHIEAARRTGLPVIVHTRDADDDTGAILAEEMEKGPFTGLVHCFSSGPDFAEKAVKLGLFISASGIMTFKTADILRDTLADVPLDRLLVETDAPYLAPIPYRGKRNEPAYVAHTAAKLAEVKGVTMAEIEAATTDNFHRLFTKVARP
>NZ_LN997848.1|WP_068434749.1|3175720_3177271_-|methionine--tRNA-ligase
MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEKSAETFGMSPQALADQNSANFRELAKILGCTNDDFIRTTEERHKAACQALWDKLVTKGDIYLGAYEGWYSVRDEAFYAEDELVKGEGGAKLAPTGAPVEWVKEPSYFFRLSAFQDRLLKWYEDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGVPVPGDDSHIMYVWLDALTNYITALGYPDTSGDFAKYWPSVIHMVGKDIVRFHAVYWPAFLMAADLAPPRRVFAHGWWTNEGQKISKSLGNVIDPLELIATYGLDQVRYFLLREVPFGNDGDFSKRAMMGRMNSELANDYGNLVQRSLSMIGKNCAGVTPAHTPDTDDDKAMLGAAYAMLDKVRDAIDRQMYHEAIEAIWVVIRAGNGYVDKQAPWALKKTDPARMGTVLWVLAETIRSVALLTQPFMPAASGRILDQLAVSEDERSFAFFGPGHALKEGIALPAPQGVFPRHVEEASA
>NZ_LN997848.1|WP_068434750.1|3177303_3178395_-|DNA-polymerase-III-subunit-delta'
MTDSPHPRETSDLFGHGAAETALLDAWNSGRLAHAWLLCGPKGIGKATLAYRFARFVLAGGGEGGGLFGDAPGDLEIRPDHPVFRRIASQGHADLESVERGWADDKKSKLRSEIVVEDVRGIGHFMSLTPAEGGWRVVIIDSADEMNRNAANAVLKVLEEPPRNALMLLVSHSPGRLLPTIRSRCRRLMLQPLGEEVVADLLTRQRPELGPTEVAALAKLGEGSIGKALALADEGGLDLYRELLELLHGLPRLDVPALHAFGDKVARPENDGSFRTVTELLGWWLARLIRAGGRRGAGMAEVVAGEGALMERLLAAASLEHWLEVWEKITTLFARTEAVHLDRKQAVLGAFMAVERLARQGSR
>NZ_LN997848.1|WP_068434752.1|3178391_3179030_-|dTMP-kinase
METARGRFITLEGGEGAGKSTQVRLLAESLRDEGLMVVTTREPGGSAGAEAIRALLVEGDTNRWDGVTEALLHFAARRDHLVKTVWPALERGAWVISDRFADSTLAYQGFGHGLDPEIIASLYRVAVGHFAPDLTLVLDLPVEKGLERAGARGGAEDRYERMGLGFHQRLRQGFLGIAASNPMRCAVIDATHSPDEVHGDIMATVRARLPVP
>NZ_LN997848.1|WP_068434754.1|3179035_3180205_-|D-alanyl-D-alanine-carboxypeptidase
MLDFFRRSLAAAVAALPLAAASSLPAQSQAIETAAKQAIVVDYASGQVLMEKNADELMVPSSMSKLMTVYMVFDKLKSGAWKPSDRLPVSETAWKRHYKSEGSLMFLPVNSTASVEELLKGVVIQSGNDACSVLAEAYSGSEEAFAEEETRKSRQIGLTKSTFKNASGWPEPGHLMTARDLSVLARHLIGDFPEYYPLFSQMEFVFNGIKQGNRNPLLYNTPGADGLKTGHTEAAGYGLTASIKRGNRRIIMVLNGMASMKERAEESRRLTEWAFREWETYALFKAGEEVIPDAEVWLGQAETVPLLIKSGVEVTMQRRNRAEMKVTTVYNGPIAAPIKAGQEVGKVVVTAPGMVPVEVPMVAGADVEKLGFAGRMSTAFKRIVWGKKG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LN997848_1	1.2\|2696112\|37\|NZ_LN997848\|CRISPRCasFinder	2696112-2696148	37	NZ_AP018521	Sphingobium sp. YG1 plasmid pYGP2, complete sequence	28553-28589	7	0.811
NZ_LN997848_1	1.3\|2696172\|34\|NZ_LN997848\|CRISPRCasFinder	2696172-2696205	34	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	849738-849771	8	0.765
NZ_LN997848_1	1.3\|2696172\|34\|NZ_LN997848\|CRISPRCasFinder	2696172-2696205	34	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	235111-235144	8	0.765
NZ_LN997848_1	1.3\|2696172\|34\|NZ_LN997848\|CRISPRCasFinder	2696172-2696205	34	NZ_LR594664	Variovorax sp. RA8 plasmid 3	228146-228179	8	0.765
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	427855-427888	8	0.765
NZ_LN997848_1	1.3\|2696172\|34\|NZ_LN997848\|CRISPRCasFinder	2696172-2696205	34	NC_042132	Gordonia phage Sour, complete genome	49210-49243	9	0.735
NZ_LN997848_1	1.3\|2696172\|34\|NZ_LN997848\|CRISPRCasFinder	2696172-2696205	34	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	361479-361512	9	0.735
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	NZ_LR134461	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence	39808-39841	9	0.735
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	833089-833122	9	0.735
NZ_LN997848_1	1.3\|2696172\|34\|NZ_LN997848\|CRISPRCasFinder	2696172-2696205	34	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	180907-180940	10	0.706
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	NZ_CP051472	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10C, complete sequence	15159-15192	10	0.706
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	NZ_CP012965	Rhodobacter sphaeroides strain MBTLJ-8 plasmid unnamed, complete sequence	14589-14622	10	0.706
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	CP047035	Rhodobacter sphaeroides strain DSM 158 plasmid pC, complete sequence	14697-14730	10	0.706
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	NZ_CP047041	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pC, complete sequence	14685-14718	10	0.706
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	NZ_CP015214	Rhodobacter sphaeroides strain MBTLJ-13 plasmid c, complete sequence	29920-29953	10	0.706
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	NZ_CP030275	Rhodobacter sphaeroides 2.4.1 plasmid pC, complete sequence	65328-65361	10	0.706
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	NZ_CP015292	Rhodobacter sphaeroides strain MBTLJ-20 plasmid d, complete sequence	11477-11510	10	0.706
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	428884-428917	10	0.706
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	MT684596	Streptomyces phage Zeigle, complete genome	4425-4458	10	0.706
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	MN994275	Streptomyces phage JXY1, complete genome	18821-18854	10	0.706
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	MG518519	Streptomyces phage Manuel, complete genome	4828-4861	10	0.706
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	NC_048684	Streptomyces phage WRightOn, complete genome	4769-4802	10	0.706
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	NZ_CP025506	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence	67691-67724	11	0.676
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	NZ_CP007050	Rhizobium leguminosarum bv. trifolii WSM1689 plasmid unnamed, complete sequence	185141-185174	11	0.676
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	NZ_CP030763	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence	522492-522525	11	0.676
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	NZ_CP022668	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence	520439-520472	11	0.676
NZ_LN997848_2	2.3\|2696640\|34\|NZ_LN997848\|CRISPRCasFinder	2696640-2696673	34	NZ_CP050088	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence	201944-201977	11	0.676
NZ_LN997848_1	1.3\|2696172\|34\|NZ_LN997848\|CRISPRCasFinder	2696172-2696205	34	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	332895-332928	12	0.647
NZ_LN997848_1	1.3\|2696172\|34\|NZ_LN997848\|CRISPRCasFinder	2696172-2696205	34	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1480363-1480396	12	0.647
NZ_LN997848_1	1.4\|2696229\|34\|NZ_LN997848\|CRISPRCasFinder	2696229-2696262	34	AP017627	Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome	87834-87867	12	0.647
NZ_LN997848_2	2.1\|2696520\|37\|NZ_LN997848\|CRISPRCasFinder	2696520-2696556	37	NZ_CP031953	Phaeobacter inhibens strain 2.10 plasmid unnamed1, complete sequence	146009-146045	12	0.676
NZ_LN997848_2	2.1\|2696520\|37\|NZ_LN997848\|CRISPRCasFinder	2696520-2696556	37	NC_018421	Phaeobacter inhibens 2.10 plasmid pPGA2_239, complete sequence	145914-145950	12	0.676

1. spacer 1.2|2696112|37|NZ_LN997848|CRISPRCasFinder matches to NZ_AP018521 (Sphingobium sp. YG1 plasmid pYGP2, complete sequence) position: , mismatch: 7, identity: 0.811

cgtggt-caacggctcgttctggaatgccggcatggat	CRISPR spacer
-gtgctgcaacggcttgttctggcatgccggcattaag	Protospacer
 *** * ********.******* ********** .*

2. spacer 1.3|2696172|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

caagatcggcggcagcctgggcggcacggtcaac--	CRISPR spacer
caagatcggcggcagccttggc--cgcgacccgctg	Protospacer
****************** ***  *.**..* .*

3. spacer 1.3|2696172|34|NZ_LN997848|CRISPRCasFinder matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 8, identity: 0.765

---caagatcggcggcagcctgggcggcacggtcaac	CRISPR spacer
acccaag---ggcggcagcctgcacggcacggtcctg	Protospacer
   ****   ************ .**********

4. spacer 1.3|2696172|34|NZ_LN997848|CRISPRCasFinder matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 8, identity: 0.765

caagatcggcggcagcctgggcggcacggtcaac	CRISPR spacer
cctgctctgccgcagcctgggcggcacgggcggc	Protospacer
*  * ** ** ****************** *..*

5. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.765

gcagatcggcggcgacgcctccggctcggtttcc--	CRISPR spacer
gcagatcggtggcgacgccgccgg--ggatcacccg	Protospacer
*********.********* ****   *.*. **

6. spacer 1.3|2696172|34|NZ_LN997848|CRISPRCasFinder matches to NC_042132 (Gordonia phage Sour, complete genome) position: , mismatch: 9, identity: 0.735

caagatcggcggcagcctgggcggcacggtcaac	CRISPR spacer
gggcgtcggcggctgcctggtcggcacggtcctc	Protospacer
 .. .******** ****** **********  *

7. spacer 1.3|2696172|34|NZ_LN997848|CRISPRCasFinder matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 9, identity: 0.735

caagatcggcggcagcctgggcggcacggtcaac	CRISPR spacer
cgccccctgcggcaggctggccggcacggtcagc	Protospacer
*.   .* ******* **** ***********.*

8. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to NZ_LR134461 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence) position: , mismatch: 9, identity: 0.735

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
ggtgatcggcggcgacgcctccgcgtcgtgcatc	Protospacer
*  ********************  ***  . .*

9. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.735

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
cgccatcaccggcaacgtcaacgccaccatcgtc	Protospacer
*  ..*  ********.** ************ *

10. spacer 1.3|2696172|34|NZ_LN997848|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 10, identity: 0.706

caagatcggcggcagcctgggcggcacggtcaac	CRISPR spacer
cacgatcgccggcagcctgggcggccgcaagagt	Protospacer
** ***** ****************   .  *..

11. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP051472 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10C, complete sequence) position: , mismatch: 10, identity: 0.706

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
ggccttcggcggcgaggccttcggctcggtcgat	Protospacer
*    ********** ****.*********.  .

12. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP012965 (Rhodobacter sphaeroides strain MBTLJ-8 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
ggccttcggcggcgaggccttcggctcggtcgat	Protospacer
*    ********** ****.*********.  .

13. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to CP047035 (Rhodobacter sphaeroides strain DSM 158 plasmid pC, complete sequence) position: , mismatch: 10, identity: 0.706

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
ggccttcggcggcgaggccttcggctcggtcgat	Protospacer
*    ********** ****.*********.  .

14. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP047041 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pC, complete sequence) position: , mismatch: 10, identity: 0.706

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
ggccttcggcggcgaggccttcggctcggtcgat	Protospacer
*    ********** ****.*********.  .

15. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP015214 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid c, complete sequence) position: , mismatch: 10, identity: 0.706

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
ggccttcggcggcgaggccttcggctcggtcgat	Protospacer
*    ********** ****.*********.  .

16. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP030275 (Rhodobacter sphaeroides 2.4.1 plasmid pC, complete sequence) position: , mismatch: 10, identity: 0.706

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
ggccttcggcggcgaggccttcggctcggtcgat	Protospacer
*    ********** ****.*********.  .

17. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP015292 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid d, complete sequence) position: , mismatch: 10, identity: 0.706

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
ggccttcggcggcgaggccttcggctcggtcgat	Protospacer
*    ********** ****.*********.  .

18. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 10, identity: 0.706

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
ccagatcggcggcgacggccccggccgcgcgcgc	Protospacer
 **************** *.*****.  *. . *

19. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to MT684596 (Streptomyces phage Zeigle, complete genome) position: , mismatch: 10, identity: 0.706

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
ggttcgctccggcaacatcgacgccagcatcatc	Protospacer
   *   ************ ****** ****. *

20. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to MN994275 (Streptomyces phage JXY1, complete genome) position: , mismatch: 10, identity: 0.706

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
ggttcgctccggcaacatcgacgccagcatcatc	Protospacer
   *   ************ ****** ****. *

21. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to MG518519 (Streptomyces phage Manuel, complete genome) position: , mismatch: 10, identity: 0.706

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
ggttcgctccggcaacatcgacgccagcatcatc	Protospacer
   *   ************ ****** ****. *

22. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to NC_048684 (Streptomyces phage WRightOn, complete genome) position: , mismatch: 10, identity: 0.706

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
ggttcgctccggcaacatcgacgccagcatcatc	Protospacer
   *   ************ ****** ****. *

23. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 11, identity: 0.676

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
cggcaataccagctacatctacgccaccatcggt	Protospacer
* ...   **.** ******************..

24. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP007050 (Rhizobium leguminosarum bv. trifolii WSM1689 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
cggcaataccagctacatctacgccaccatcggt	Protospacer
* ...   **.** ******************..

25. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.676

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
cggcaataccagctacatctacgccaccatcggt	Protospacer
* ...   **.** ******************..

26. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 11, identity: 0.676

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
cggcaataccagctacatctacgccaccatcggt	Protospacer
* ...   **.** ******************..

27. spacer 2.3|2696640|34|NZ_LN997848|CRISPRCasFinder matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 11, identity: 0.676

ctatgtgtccggcaacatctacgccaccatcgac	CRISPR spacer
cggcaataccagctacatctacgccaccatcggt	Protospacer
* ...   **.** ******************..

28. spacer 1.3|2696172|34|NZ_LN997848|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 12, identity: 0.647

caagatcggcggcagcctgggcggcacggtcaac	CRISPR spacer
ggtcgtcggcggcggccagggcggcacgggtctg	Protospacer
 .  .********.*** *********** .

29. spacer 1.3|2696172|34|NZ_LN997848|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 12, identity: 0.647

caagatcggcggcagcctgggcggcacggtcaac	CRISPR spacer
ggtcgtcggcggcggccagggcggcacgggtctg	Protospacer
 .  .********.*** *********** .

30. spacer 1.4|2696229|34|NZ_LN997848|CRISPRCasFinder matches to AP017627 (Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome) position: , mismatch: 12, identity: 0.647

gcagatcggcggcgacgcctccggctcggtttcc	CRISPR spacer
cgccctcggcggcgacgcggccggctcgggccgg	Protospacer
     *************  ********* ..

31. spacer 2.1|2696520|37|NZ_LN997848|CRISPRCasFinder matches to NZ_CP031953 (Phaeobacter inhibens strain 2.10 plasmid unnamed1, complete sequence) position: , mismatch: 12, identity: 0.676

tcacatcgacggcatcgccaacggcggttccatcgtc	CRISPR spacer
cgacaacgacggcaccgccaacggcggtgatcaggat	Protospacer
. *** ********.*************  .   * .

32. spacer 2.1|2696520|37|NZ_LN997848|CRISPRCasFinder matches to NC_018421 (Phaeobacter inhibens 2.10 plasmid pPGA2_239, complete sequence) position: , mismatch: 12, identity: 0.676

tcacatcgacggcatcgccaacggcggttccatcgtc	CRISPR spacer
cgacaacgacggcaccgccaacggcggtgatcaggat	Protospacer
. *** ********.*************  .   * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

20557 : 57746

Acidithiobacillus_phage(48.28%)

capsid,terminase,head,transposase,portal,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082700302.1\|20557_22081_-	DNA cytosine methyltransferase	Q14VY6	Ranid_herpesvirus	2.7e-23	25.4
WP_082700674.1\|22077_22491_-	DNA mismatch endonuclease Vsr	I6NSG0	Burkholderia_phage	1.6e-34	52.8
WP_156428591.1\|22777_23955_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.2e-52	41.6
WP_068427893.1\|24174_24567_-	hypothetical protein	K4HZX2	Acidithiobacillus_phage	3.5e-15	39.5
WP_068427897.1\|24563_25904_-	recombinase family protein	K4ICM1	Acidithiobacillus_phage	1.5e-118	54.6
WP_068427900.1\|25900_26350_-	DUF2924 domain-containing protein	K4I3X1	Acidithiobacillus_phage	1.0e-18	41.1
WP_068427902.1\|26346_26550_-	hypothetical protein	NA	NA	NA	NA
WP_068427905.1\|26735_28940_+	hypothetical protein	NA	NA	NA	NA
WP_156428592.1\|29033_29279_+	hypothetical protein	NA	NA	NA	NA
WP_068427911.1\|29376_30126_+	hypothetical protein	NA	NA	NA	NA
WP_009870337.1\|30215_30419_+	hypothetical protein	NA	NA	NA	NA
WP_068427915.1\|30559_30850_+	hypothetical protein	NA	NA	NA	NA
WP_068427918.1\|30849_31782_+	ATP-binding protein	K4HZX9	Acidithiobacillus_phage	1.5e-96	60.5
WP_068427921.1\|31800_32382_+	hypothetical protein	K4ICM8	Acidithiobacillus_phage	1.3e-53	54.3
WP_068427924.1\|32393_34073_+	DEAD/DEAH box helicase	A0A2K9V3E9	Faecalibacterium_phage	2.2e-42	34.2
WP_068427927.1\|34271_34478_+	hypothetical protein	NA	NA	NA	NA
WP_068427931.1\|34477_35236_+	PD-(D/E)XK nuclease family protein	K4HZA0	Acidithiobacillus_phage	4.1e-81	59.1
WP_082700675.1\|35463_37593_+	hypothetical protein	K4HZY1	Acidithiobacillus_phage	1.5e-165	65.7
WP_068437312.1\|37782_38202_+	hypothetical protein	K4ICN3	Acidithiobacillus_phage	7.2e-43	61.3
WP_068427937.1\|38198_38396_+	hypothetical protein	NA	NA	NA	NA
WP_068427941.1\|38388_38853_+	RNA polymerase subunit sigma	NA	NA	NA	NA
WP_068427944.1\|39111_40668_+	DNA cytosine methyltransferase	Q6V7R9	Burkholderia_virus	1.2e-87	41.1
WP_068427946.1\|40667_41924_+	ParB N-terminal domain-containing protein	A0A0A8ILE7	Aurantimonas_phage	5.7e-120	51.6
WP_068427949.1\|41920_42130_+	hypothetical protein	K4I1E3	Acidithiobacillus_phage	2.6e-17	69.6
WP_068427951.1\|42190_42454_+	HU family DNA-binding protein	NA	NA	NA	NA
WP_068437315.1\|42630_43140_-	DUF3489 domain-containing protein	K4HZZ2	Acidithiobacillus_phage	5.1e-19	36.4
WP_068427954.1\|43240_43774_+	elements of external origin	A0A2H4JCL4	uncultured_Caudovirales_phage	2.6e-37	50.3
WP_068427957.1\|43721_45716_+\|terminase	phage terminase large subunit family protein	A0A2H4JIC6	uncultured_Caudovirales_phage	3.6e-209	57.3
WP_068427960.1\|45712_46330_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	4.0e-18	37.5
WP_068427963.1\|46448_46658_+	hypothetical protein	NA	NA	NA	NA
WP_068427964.1\|46660_48124_+\|portal	phage portal protein	K4I1F2	Acidithiobacillus_phage	1.8e-189	69.5
WP_068427965.1\|48132_49353_+	S49 family peptidase	K4HZZ6	Acidithiobacillus_phage	3.3e-96	51.0
WP_068427966.1\|49355_49745_+\|head	head decoration protein	K4ICP8	Acidithiobacillus_phage	4.9e-30	59.5
WP_068427967.1\|49759_50782_+\|capsid	major capsid protein	K4I3Z3	Acidithiobacillus_phage	5.5e-105	56.6
WP_068427968.1\|50783_51095_+	hypothetical protein	NA	NA	NA	NA
WP_068427969.1\|51274_51925_+	hypothetical protein	G8DH49	Emiliania_huxleyi_virus	2.3e-35	44.3
WP_068427972.1\|51893_52214_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	3.3e-16	47.9
WP_068427975.1\|52210_52537_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	7.3e-11	42.4
WP_068427986.1\|52637_53066_+	acyl-CoA transferase	G8DH50	Emiliania_huxleyi_virus	1.4e-30	47.5
WP_068427991.1\|53091_54054_+	hypothetical protein	G8DH51	Emiliania_huxleyi_virus	3.5e-61	43.7
WP_068427994.1\|54062_54587_+	hypothetical protein	G8DH52	Emiliania_huxleyi_virus	1.3e-09	34.1
WP_082700676.1\|54583_54814_+	hypothetical protein	NA	NA	NA	NA
WP_172821873.1\|54800_57746_+\|tail	phage tail length tape measure family protein	NA	NA	NA	NA

DBSCAN-SWA_2

427943 : 476426

Bacillus_phage(12.5%)

protease,integrase,tRNA,transposase

attL 473577:473598|attR 477215:477236

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068428969.1\|427943_429251_+\|tRNA	CCA tRNA nucleotidyltransferase	A0A2L0UZ92	Agrobacterium_phage	9.8e-38	42.3
WP_068428971.1\|429245_429491_-	hypothetical protein	NA	NA	NA	NA
WP_068428975.1\|429668_431102_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_068428978.1\|431178_432459_+	DUF3422 domain-containing protein	NA	NA	NA	NA
WP_068428981.1\|432590_435092_-	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	4.1e-16	38.9
WP_068428984.1\|435092_435713_-	chemotaxis protein CheC	NA	NA	NA	NA
WP_068428987.1\|435709_436081_-	response regulator	NA	NA	NA	NA
WP_068428991.1\|436188_436608_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_082700321.1\|436990_438319_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_068437409.1\|438342_438657_-	hypothetical protein	NA	NA	NA	NA
WP_068428994.1\|439128_440628_+	type I restriction-modification system subunit M	A0A220A2U4	Liberibacter_phage	1.0e-131	48.6
WP_082700322.1\|440608_441841_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_082700323.1\|441868_444238_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	4.3e-68	32.9
WP_082700324.1\|444386_445421_+	RelA/SpoT domain-containing protein	NA	NA	NA	NA
WP_068437415.1\|445467_446157_-	DUF2786 domain-containing protein	A0A219VHD3	Ochrobactrum_phage	2.0e-05	25.7
WP_068429000.1\|446201_446804_-	hypothetical protein	NA	NA	NA	NA
WP_082700684.1\|447030_447576_-	dual specificity protein phosphatase family protein	NA	NA	NA	NA
WP_156428611.1\|447711_448020_+	hypothetical protein	NA	NA	NA	NA
WP_156428612.1\|448067_448607_-	hypothetical protein	NA	NA	NA	NA
WP_068429006.1\|449379_449829_+	hypothetical protein	NA	NA	NA	NA
WP_082700325.1\|450256_450709_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_068429009.1\|451124_451706_-\|integrase	site-specific integrase	K4K327	Caulobacter_virus	6.5e-26	41.2
WP_082700326.1\|451932_452769_-	DNA adenine methylase	E3SNS6	Prochlorococcus_phage	5.5e-26	31.9
WP_068429011.1\|452896_453289_-	hypothetical protein	NA	NA	NA	NA
WP_156428613.1\|453621_455220_-	hypothetical protein	NA	NA	NA	NA
WP_082700327.1\|455707_456568_+	DUF5131 family protein	A0A0A7RVQ8	Mycobacterium_phage	3.7e-25	32.7
WP_068429018.1\|456586_456931_+	hypothetical protein	NA	NA	NA	NA
WP_068429027.1\|457031_458309_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	4.5e-88	43.2
WP_082700328.1\|458315_458786_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	7.8e-22	39.8
WP_156428614.1\|458925_459297_+	hypothetical protein	NA	NA	NA	NA
WP_082700329.1\|459416_459869_-	DUF1465 family protein	NA	NA	NA	NA
WP_156428615.1\|460095_460824_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_082700330.1\|461320_462784_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.1e-16	31.1
WP_068437421.1\|463210_463561_+	hypothetical protein	NA	NA	NA	NA
WP_082700332.1\|463621_464719_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_068429047.1\|464778_465057_+	HU family DNA-binding protein	B5TA87	Burkholderia_phage	2.4e-18	56.7
WP_082700333.1\|465046_465544_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.4e-16	41.5
WP_068437424.1\|465644_466064_+	helix-turn-helix transcriptional regulator	Q8W6G2	Sinorhizobium_phage	1.7e-20	43.9
WP_082700334.1\|466494_466878_+	response regulator	NA	NA	NA	NA
WP_082700335.1\|466983_467280_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_082700336.1\|467566_469063_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_068429053.1\|469059_469899_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.5e-39	37.9
WP_068429056.1\|470713_472030_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_068429059.1\|472125_472335_+	hypothetical protein	NA	NA	NA	NA
WP_172821877.1\|472394_472859_-	response regulator	NA	NA	NA	NA
473577:473598	attL	NA	NA	NA	NA
WP_068437430.1\|473704_474004_+	hypothetical protein	NA	NA	NA	NA
WP_082700338.1\|474022_474319_-	hypothetical protein	NA	NA	NA	NA
WP_156428616.1\|474346_474544_-	hypothetical protein	NA	NA	NA	NA
WP_068429066.1\|474916_475303_+	response regulator	NA	NA	NA	NA
WP_082700340.1\|475358_475847_+	bacteriohemerythrin	NA	NA	NA	NA
WP_068429070.1\|475859_476426_-\|integrase	site-specific integrase	K4JX14	Caulobacter_virus	3.7e-18	34.8
477215:477236	attR	NA	NA	NA	NA

DBSCAN-SWA_3

596365 : 636110

uncultured_Caudovirales_phage(25.0%)

terminase,transposase,holin,integrase

attL 629889:629907|attR 639415:639433

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068429425.1\|596365_597850_+\|terminase	phage terminase large subunit	A0A2H4JCA3	uncultured_Caudovirales_phage	9.0e-56	30.4
WP_068429429.1\|597892_598192_+	hypothetical protein	NA	NA	NA	NA
WP_068429432.1\|598204_598723_+\|holin	holin family protein	A0A1D9CA16	Salinivibrio_phage	3.2e-16	37.9
WP_068437445.1\|598772_599273_-	ferritin family protein	NA	NA	NA	NA
WP_068429436.1\|599441_599651_+	dodecin domain-containing protein	NA	NA	NA	NA
WP_068437448.1\|599655_599886_-	hypothetical protein	NA	NA	NA	NA
WP_068429439.1\|599962_600277_-	thioredoxin TrxA	A0A1J0GW78	Streptomyces_phage	2.3e-22	50.5
WP_082700345.1\|600762_601557_+	hypothetical protein	NA	NA	NA	NA
WP_068429443.1\|601624_602104_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.0e-16	41.9
WP_156428623.1\|602180_602771_-	hypothetical protein	NA	NA	NA	NA
WP_156428624.1\|602780_603110_-	hypothetical protein	NA	NA	NA	NA
WP_156428625.1\|603496_603796_+	hypothetical protein	NA	NA	NA	NA
WP_156428626.1\|603972_604857_+	hypothetical protein	NA	NA	NA	NA
WP_068429457.1\|604853_606383_+	hypothetical protein	NA	NA	NA	NA
WP_068429463.1\|607147_607972_-	pirin family protein	NA	NA	NA	NA
WP_172821878.1\|610935_612603_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_068429471.1\|613189_613459_+	hypothetical protein	NA	NA	NA	NA
WP_068429474.1\|613482_613746_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_156428628.1\|614232_614736_+	hypothetical protein	NA	NA	NA	NA
WP_068429483.1\|614805_616266_+	hypothetical protein	NA	NA	NA	NA
WP_156428629.1\|616266_616560_-	hypothetical protein	NA	NA	NA	NA
WP_068429486.1\|616632_616896_-	hypothetical protein	NA	NA	NA	NA
WP_068429489.1\|616969_619435_-	cation:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	3.7e-06	27.1
WP_172821879.1\|619523_622121_-	response regulator	A0A1V0SGX0	Hokovirus	7.1e-32	30.3
WP_068429497.1\|622404_624102_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_068429500.1\|624121_625228_+	hydrogenase small subunit	NA	NA	NA	NA
WP_068429503.1\|625214_627011_+	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA
WP_068429509.1\|627025_627748_+	Ni/Fe-hydrogenase, b-type cytochrome subunit	NA	NA	NA	NA
WP_068429512.1\|627740_628229_+	HyaD/HybD family hydrogenase maturation endopeptidase	NA	NA	NA	NA
WP_068429515.1\|628249_628690_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_008618450.1\|628697_629036_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_068429519.1\|629212_629695_+	hypothetical protein	NA	NA	NA	NA
WP_068429523.1\|629768_630872_-	hypothetical protein	NA	NA	NA	NA
629889:629907	attL	NA	NA	NA	NA
WP_156428594.1\|632695_633647_-\|transposase	IS630 family transposase	A0A2P0VP61	Tetraselmis_virus	1.1e-14	28.6
WP_068428062.1\|633797_634046_-	hypothetical protein	NA	NA	NA	NA
WP_068428058.1\|634042_635242_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_068428055.1\|635252_636110_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.8e-36	35.3
639415:639433	attR	NA	NA	NA	NA

DBSCAN-SWA_4

867848 : 875274

Enterobacteria_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068430217.1\|867848_868967_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.7e-84	48.3
WP_068430220.1\|868963_869854_+	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	5.0e-86	55.6
WP_068430222.1\|869850_871647_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.9e-23	25.9
WP_068430225.1\|871650_872685_+	SDR family oxidoreductase	Q58M85	Prochlorococcus_phage	2.0e-49	40.7
WP_068430228.1\|872704_874261_+	adenylyltransferase/cytidyltransferase family protein	M4QSA2	Synechococcus_phage	2.1e-10	44.2
WP_068430231.1\|874281_875274_+	NAD-dependent epimerase/dehydratase family protein	A0A1V0SKV4	Klosneuvirus	9.4e-17	25.4

DBSCAN-SWA_5

2284831 : 2319435

Tupanvirus(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082700445.1\|2284831_2285014_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_068433356.1\|2287179_2287857_-	CoA transferase subunit B	NA	NA	NA	NA
WP_068433358.1\|2287873_2288575_-	CoA transferase subunit A	NA	NA	NA	NA
WP_068433360.1\|2288825_2289992_+	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA
WP_068433362.1\|2290012_2290861_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA
WP_068433364.1\|2290924_2291686_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_172821908.1\|2291669_2292707_-	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_068433367.1\|2292918_2293692_-	cyclohexa-1,5-dienecarbonyl-CoA hydratase	NA	NA	NA	NA
WP_068433369.1\|2293691_2294831_-	6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase	NA	NA	NA	NA
WP_068433373.1\|2294842_2295910_-	6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase	A0A2K9L7I1	Tupanvirus	5.9e-09	26.4
WP_068433375.1\|2296105_2296573_+	MaoC family dehydratase	NA	NA	NA	NA
WP_068433378.1\|2296707_2297853_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_172821909.1\|2297977_2298646_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_068433382.1\|2298685_2300335_-	acyl--CoA ligase	NA	NA	NA	NA
WP_156428696.1\|2300641_2300842_+	hypothetical protein	NA	NA	NA	NA
WP_172821871.1\|2301041_2301179_-	hypothetical protein	NA	NA	NA	NA
WP_068433387.1\|2301230_2301494_+	HU family DNA-binding protein	NA	NA	NA	NA
WP_068433389.1\|2301502_2301694_+	hypothetical protein	NA	NA	NA	NA
WP_082700448.1\|2301669_2301981_-	DUF3489 domain-containing protein	K4HZZ2	Acidithiobacillus_phage	4.0e-14	64.5
WP_068433390.1\|2302079_2302442_-	hypothetical protein	K4ICP1	Acidithiobacillus_phage	7.1e-15	60.0
WP_156428697.1\|2302493_2302751_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	7.5e-19	62.1
WP_156428698.1\|2302747_2302927_-	hypothetical protein	NA	NA	NA	NA
WP_082700450.1\|2302845_2303130_-\|transposase	transposase	NA	NA	NA	NA
WP_068433391.1\|2303300_2304758_+\|transposase	IS4 family transposase	Q9JMP3	Wolbachia_phage	7.7e-68	35.6
WP_082700451.1\|2306549_2306963_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_068433396.1\|2307072_2308626_+	PAS domain S-box protein	A0A2K9L5I4	Tupanvirus	7.6e-05	31.2
WP_172821910.1\|2308672_2309590_-	hypothetical protein	NA	NA	NA	NA
WP_011383368.1\|2311109_2311358_+	hypothetical protein	NA	NA	NA	NA
WP_008621829.1\|2311512_2311887_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	8.4e-27	47.7
WP_172821911.1\|2312352_2312721_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_172821912.1\|2312774_2313251_-	hypothetical protein	NA	NA	NA	NA
WP_068433398.1\|2313345_2313696_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_156428700.1\|2314177_2314468_+	hypothetical protein	NA	NA	NA	NA
WP_082700456.1\|2315233_2315605_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_068433399.1\|2316368_2316581_-	hypothetical protein	NA	NA	NA	NA
WP_008621838.1\|2316967_2317447_+	hypothetical protein	NA	NA	NA	NA
WP_050750629.1\|2317673_2318030_+	response regulator	NA	NA	NA	NA
WP_068430816.1\|2318406_2319435_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2358651 : 2442223

Leptospira_phage(23.08%)

integrase,holin,transposase

attL 2358623:2358682|attR 2438407:2438514

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2358623:2358682	attL	NA	NA	NA	NA
WP_068433431.1\|2358651_2360010_-\|transposase	IS66 family transposase	NA	NA	NA	NA
2358623:2358682	attL	NA	NA	NA	NA
WP_068433435.1\|2360707_2361655_-	hemerythrin family protein	NA	NA	NA	NA
WP_068433437.1\|2362283_2363135_-	bacteriohemerythrin	NA	NA	NA	NA
WP_082700458.1\|2363152_2363656_-	hemerythrin family protein	NA	NA	NA	NA
WP_068433440.1\|2363690_2365001_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.2e-08	63.3
WP_156428853.1\|2365015_2365498_-	PAS domain-containing protein	A0A1B0V854	Salmonella_phage	3.3e-23	40.7
WP_082700459.1\|2365693_2367073_-	bacteriohemerythrin	NA	NA	NA	NA
WP_068428055.1\|2367285_2368143_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.8e-36	35.3
WP_068428058.1\|2368153_2369353_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_068428062.1\|2369349_2369598_+	hypothetical protein	NA	NA	NA	NA
WP_156428703.1\|2369748_2370699_+\|transposase	IS630 family transposase	A0A2P0VP61	Tetraselmis_virus	1.4e-14	28.6
WP_011383424.1\|2371126_2372755_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_068433444.1\|2372997_2373225_-	hypothetical protein	NA	NA	NA	NA
WP_043746027.1\|2373388_2373694_-	hypothetical protein	NA	NA	NA	NA
WP_011383427.1\|2373780_2373996_-	hypothetical protein	NA	NA	NA	NA
WP_068437710.1\|2374429_2376106_+	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	1.6e-13	30.0
WP_068433446.1\|2376134_2377097_+	FraH protein	NA	NA	NA	NA
WP_008622189.1\|2377155_2378013_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_011383430.1\|2378060_2378879_+	LemA family protein	NA	NA	NA	NA
WP_008622632.1\|2378875_2379130_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068433448.1\|2379126_2380017_+	magnetosome biogenesis CDF transporter MamB	NA	NA	NA	NA
WP_008615104.1\|2380076_2380325_-	hypothetical protein	NA	NA	NA	NA
WP_068433450.1\|2380464_2380890_-	transcriptional repressor	NA	NA	NA	NA
WP_008615101.1\|2380995_2381421_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068437713.1\|2381643_2383794_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.3e-121	43.6
WP_008615089.1\|2383810_2384767_+	CDF family Co(II)/Ni(II) efflux transporter DmeF	NA	NA	NA	NA
WP_068433451.1\|2385014_2385341_+	YnfA family protein	A0A2H4JF35	uncultured_Caudovirales_phage	1.9e-22	51.0
WP_082700460.1\|2385376_2386312_-	cell division protein FtsZ	NA	NA	NA	NA
WP_008615077.1\|2386357_2388292_-	MFS transporter	NA	NA	NA	NA
WP_008615076.1\|2388275_2389046_-	magnetochrome domain-containing protein	NA	NA	NA	NA
WP_068433452.1\|2389226_2390396_-	chemotaxis protein	NA	NA	NA	NA
WP_068433454.1\|2390667_2391648_+	hypothetical protein	NA	NA	NA	NA
WP_068433456.1\|2391631_2392585_+	hypothetical protein	NA	NA	NA	NA
WP_011383440.1\|2392591_2393557_+	protein kinase family protein	NA	NA	NA	NA
WP_068433457.1\|2393686_2394235_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068433459.1\|2394246_2394789_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_068433461.1\|2395280_2396489_+	carbohydrate porin	NA	NA	NA	NA
WP_008615052.1\|2396497_2396818_+	ferrous iron transport protein A	NA	NA	NA	NA
WP_068433463.1\|2396853_2398968_+	ferrous iron transport protein B	NA	NA	NA	NA
WP_156428705.1\|2399220_2399370_+	hypothetical protein	NA	NA	NA	NA
WP_011383445.1\|2399449_2399785_-	hypothetical protein	NA	NA	NA	NA
WP_156428854.1\|2399796_2400390_-	cell wall protein TIR3 precursor	NA	NA	NA	NA
WP_068433464.1\|2400417_2400651_-	hypothetical protein	NA	NA	NA	NA
WP_068433467.1\|2400741_2401662_+	hypothetical protein	NA	NA	NA	NA
WP_068433469.1\|2401658_2402822_+	serine/threonine protein kinase	NA	NA	NA	NA
WP_156428706.1\|2403138_2404096_-\|transposase	IS630 family transposase	A0A1V0SCG6	Indivirus	7.2e-06	26.4
WP_068428062.1\|2404244_2404493_-	hypothetical protein	NA	NA	NA	NA
WP_068428058.1\|2404489_2405689_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_068428055.1\|2405699_2406557_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.8e-36	35.3
WP_148207301.1\|2406693_2407647_-	hypothetical protein	NA	NA	NA	NA
WP_068433474.1\|2407882_2408944_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_082700461.1\|2409618_2410797_-	FecR domain-containing protein	NA	NA	NA	NA
2409415:2409784	attR	NA	NA	NA	NA
WP_068433479.1\|2411940_2412309_+	hypothetical protein	NA	NA	NA	NA
2409415:2409784	attR	NA	NA	NA	NA
WP_068430816.1\|2412830_2413859_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_148207253.1\|2414410_2415251_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_082700462.1\|2415258_2415471_-	response regulator transcription factor	NA	NA	NA	NA
WP_041041672.1\|2415621_2415861_-	hypothetical protein	NA	NA	NA	NA
WP_068433480.1\|2416445_2417546_+	response regulator	W8CYM9	Bacillus_phage	1.5e-07	33.6
WP_068433481.1\|2417609_2418761_+	two-component system response regulator	NA	NA	NA	NA
WP_156428855.1\|2418784_2419429_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_172821913.1\|2419445_2423747_+	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	4.2e-53	29.5
WP_068433490.1\|2424794_2425535_-\|holin	phosphocholine cytidylyltransferase family protein	NA	NA	NA	NA
WP_082700465.1\|2425531_2426125_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_068433492.1\|2426121_2428446_-	phosphoenolpyruvate synthase	NA	NA	NA	NA
WP_068433493.1\|2428449_2429229_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_068437725.1\|2429225_2429762_-	adenylyl-sulfate kinase	A0A2P1ELS9	Moumouvirus	2.4e-14	31.1
WP_156428707.1\|2429994_2431302_-	hypothetical protein	NA	NA	NA	NA
WP_068433494.1\|2431580_2431958_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_082700466.1\|2432208_2432742_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_068433497.1\|2433163_2435053_-	caspase family protein	NA	NA	NA	NA
WP_068428062.1\|2436093_2436342_-	hypothetical protein	NA	NA	NA	NA
WP_068428058.1\|2436338_2437538_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_068428055.1\|2437548_2438406_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.8e-36	35.3
WP_068433508.1\|2439209_2440283_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_156428708.1\|2440613_2441123_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068433508.1\|2441149_2442223_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2551004 : 2611777

uncultured_Caudovirales_phage(10.0%)

integrase,capsid,terminase,portal,tail

attL 2550681:2550702|attR 2612847:2612868

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2550681:2550702	attL	NA	NA	NA	NA
WP_068433668.1\|2551004_2551637_+\|integrase	tyrosine-type recombinase/integrase	A0A0A8WF93	Clostridium_phage	8.7e-08	27.8
WP_068433673.1\|2551787_2553170_-	class II fumarate hydratase	NA	NA	NA	NA
WP_068437734.1\|2553209_2555921_+	aconitate hydratase AcnA	NA	NA	NA	NA
WP_068433675.1\|2555917_2556262_-	hypothetical protein	NA	NA	NA	NA
WP_156428713.1\|2556258_2556426_-	hypothetical protein	NA	NA	NA	NA
WP_068433677.1\|2556580_2559232_-	cation-transporting P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	1.5e-69	29.5
WP_068433678.1\|2559254_2562128_-	PAS domain-containing protein	NA	NA	NA	NA
WP_068437737.1\|2562179_2563313_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	1.2e-15	26.1
WP_068433680.1\|2563465_2564011_-	hypothetical protein	NA	NA	NA	NA
WP_043745183.1\|2564532_2564742_+	hypothetical protein	NA	NA	NA	NA
WP_082700481.1\|2564720_2564996_+	hypothetical protein	NA	NA	NA	NA
WP_172821916.1\|2564998_2565154_+	hypothetical protein	NA	NA	NA	NA
WP_068437739.1\|2566199_2566445_-	hypothetical protein	A0A2H4J5E1	uncultured_Caudovirales_phage	6.1e-10	41.2
WP_068433685.1\|2567022_2567241_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068433687.1\|2567315_2567969_+	hypothetical protein	NA	NA	NA	NA
WP_068433689.1\|2568005_2568362_+	hypothetical protein	NA	NA	NA	NA
WP_068433691.1\|2568361_2568616_+	hypothetical protein	NA	NA	NA	NA
WP_068433693.1\|2568612_2569254_-	recombinase family protein	A0A0F7L6S1	uncultured_marine_virus	6.7e-40	46.6
WP_068433696.1\|2570351_2571959_+	PAS domain S-box protein	NA	NA	NA	NA
WP_068433698.1\|2571955_2572600_+	response regulator transcription factor	NA	NA	NA	NA
WP_068433700.1\|2572745_2573267_+	hypothetical protein	NA	NA	NA	NA
WP_068433702.1\|2573372_2573801_+	hypothetical protein	NA	NA	NA	NA
WP_145980738.1\|2573857_2574076_+	hypothetical protein	NA	NA	NA	NA
WP_068433708.1\|2574595_2575372_+\|integrase	tyrosine-type recombinase/integrase	A0A0U4JIT5	Pseudomonas_phage	9.8e-62	50.2
WP_068433710.1\|2575694_2575919_+	hypothetical protein	NA	NA	NA	NA
WP_068433712.1\|2575918_2576449_+	hypothetical protein	NA	NA	NA	NA
WP_068433714.1\|2576504_2577017_-	hypothetical protein	A0A2I7S3K6	Vibrio_phage	1.2e-18	37.3
WP_068433716.1\|2577016_2577217_-	hypothetical protein	NA	NA	NA	NA
WP_172821967.1\|2577219_2577666_-	lysozyme	A0A2I7S753	Vibrio_phage	2.0e-35	56.8
WP_068433720.1\|2577677_2578205_-	hypothetical protein	NA	NA	NA	NA
WP_068433723.1\|2578302_2580702_-\|tail	phage tail protein	A0A0B5A1N2	Achromobacter_phage	2.2e-128	36.8
WP_068433725.1\|2580698_2581118_-	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	2.2e-20	40.8
WP_068433727.1\|2581169_2581712_-	DUF1833 family protein	NA	NA	NA	NA
WP_068433729.1\|2581714_2582053_-	hypothetical protein	NA	NA	NA	NA
WP_068433731.1\|2582054_2583926_-	hypothetical protein	NA	NA	NA	NA
WP_068433733.1\|2583944_2584454_-	hypothetical protein	B5WZT5	Pseudomonas_phage	1.2e-15	38.6
WP_068433735.1\|2584453_2587450_-	tape measure protein	A5H1M1	Xanthomonas_virus	7.0e-07	24.6
WP_172821917.1\|2587439_2587583_-	hypothetical protein	NA	NA	NA	NA
WP_156428714.1\|2588222_2588594_-	hypothetical protein	NA	NA	NA	NA
WP_068433739.1\|2588626_2589589_-	hypothetical protein	G8DH51	Emiliania_huxleyi_virus	2.5e-62	43.7
WP_068433741.1\|2589615_2590050_-	hypothetical protein	G8DH50	Emiliania_huxleyi_virus	1.1e-25	45.7
WP_156428715.1\|2590039_2590720_-	hypothetical protein	NA	NA	NA	NA
WP_068433745.1\|2590716_2591034_-	hypothetical protein	NA	NA	NA	NA
WP_068433747.1\|2591039_2591273_-	hypothetical protein	NA	NA	NA	NA
WP_068433749.1\|2591349_2593251_-\|capsid	phage major capsid protein	K7XS73	uncultured_Mediterranean_phage	7.4e-119	41.7
WP_068433750.1\|2593266_2594760_-\|portal	phage portal protein	Q6R4V2	Vibrio_virus	3.5e-100	41.2
WP_068433751.1\|2594759_2595323_-	hypothetical protein	A2I2W7	Vibrio_virus	2.0e-32	46.1
WP_082700484.1\|2595322_2597311_-\|terminase	phage terminase large subunit family protein	A0A0A8ILA6	Aurantimonas_phage	8.1e-153	47.8
WP_068433753.1\|2597288_2597849_-	hypothetical protein	K4ICN8	Acidithiobacillus_phage	1.1e-06	28.1
WP_068437742.1\|2597876_2599097_-	site-specific DNA-methyltransferase	A0A2H4JGF1	uncultured_Caudovirales_phage	3.5e-98	47.1
WP_068433755.1\|2599456_2600014_-	hypothetical protein	NA	NA	NA	NA
WP_068433757.1\|2600010_2600967_-	hypothetical protein	A0A1J0MCP9	Streptomyces_phage	5.0e-15	41.4
WP_068433759.1\|2600966_2601188_-	hypothetical protein	NA	NA	NA	NA
WP_068433760.1\|2601180_2602647_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	3.4e-79	37.1
WP_068433761.1\|2602643_2602913_-	hypothetical protein	NA	NA	NA	NA
WP_068433763.1\|2603426_2604074_-	DNA cytosine methyltransferase	A0A088FTS3	Mycobacterium_phage	2.4e-37	44.7
WP_068433765.1\|2604070_2604484_-	hypothetical protein	A0A088FV39	Escherichia_phage	2.7e-18	60.4
WP_068433767.1\|2604480_2604963_-	hypothetical protein	NA	NA	NA	NA
WP_068433771.1\|2605516_2606284_+	helix-turn-helix domain-containing protein	Q8W6G7	Sinorhizobium_phage	1.5e-06	42.9
WP_068433773.1\|2606418_2606718_+	hypothetical protein	NA	NA	NA	NA
WP_068433775.1\|2606719_2606914_+	hypothetical protein	NA	NA	NA	NA
WP_068433777.1\|2606913_2607231_+	hypothetical protein	NA	NA	NA	NA
WP_068433779.1\|2607246_2607633_+	hypothetical protein	NA	NA	NA	NA
WP_068433780.1\|2607655_2608594_+	DUF2303 family protein	A0A291AUR3	Sinorhizobium_phage	2.8e-47	39.9
WP_068433781.1\|2608752_2609331_+	hypothetical protein	U5P0T3	Shigella_phage	2.2e-18	40.4
WP_068433782.1\|2609327_2609591_+	hypothetical protein	NA	NA	NA	NA
WP_068433783.1\|2609594_2610125_+	single-stranded DNA-binding protein	A0A0U2C0X4	Paracoccus_phage	5.5e-40	65.1
WP_068433785.1\|2610128_2610455_+	hypothetical protein	NA	NA	NA	NA
WP_082700486.1\|2610447_2610678_+	hypothetical protein	A0A2H4J5E1	uncultured_Caudovirales_phage	1.9e-05	43.1
WP_068433787.1\|2610679_2611777_+\|integrase	tyrosine-type recombinase/integrase	K7PHK0	Enterobacteria_phage	1.2e-65	40.4
2612847:2612868	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2830362 : 2836719

Salmonella_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068434097.1\|2830362_2831640_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	6.1e-85	41.6
WP_082700721.1\|2831646_2832117_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	4.6e-22	39.8
WP_068434101.1\|2832181_2832643_-	transcriptional repressor NrdR	NA	NA	NA	NA
WP_082700722.1\|2832923_2834753_+	diguanylate cyclase	G3MA91	Bacillus_virus	7.1e-18	31.4
WP_156428859.1\|2835190_2835430_+	hypothetical protein	NA	NA	NA	NA
WP_068434105.1\|2835508_2835787_+	HU family DNA-binding protein	B5TA87	Burkholderia_phage	1.8e-18	55.6
WP_082700507.1\|2835776_2836190_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	8.1e-23	50.4
WP_068434107.1\|2836299_2836719_+	helix-turn-helix transcriptional regulator	Q8W6G2	Sinorhizobium_phage	2.2e-20	43.9

DBSCAN-SWA_9

3098953 : 3105204

Sinorhizobium_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068434578.1\|3098953_3099217_+	DUF2312 domain-containing protein	A0A0F6R615	Sinorhizobium_phage	2.9e-18	57.7
WP_068434581.1\|3099308_3099764_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	2.2e-21	46.4
WP_068434584.1\|3100103_3100538_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_068434587.1\|3100567_3101851_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.3e-99	51.7
WP_068434590.1\|3101909_3102371_+	transcriptional repressor NrdR	NA	NA	NA	NA
WP_068434593.1\|3102402_3103479_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	6.8e-45	35.6
WP_068434596.1\|3103490_3104084_+	riboflavin synthase	A0A2I2L4R9	Orpheovirus	7.6e-22	35.1
WP_068434599.1\|3104055_3105204_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	4.0e-59	38.7

DBSCAN-SWA_10

3261421 : 3270441

uncultured_Mediterranean_phage(88.89%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068434874.1\|3261421_3262522_-	peptidoglycan DD-metalloendopeptidase family protein	I3PV79	Clostridium_phage	3.0e-16	37.6
WP_068434875.1\|3262602_3263247_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.6e-23	39.4
WP_068434877.1\|3263246_3264026_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.1e-41	38.9
WP_068434881.1\|3264027_3265296_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.3e-103	48.8
WP_082700544.1\|3265310_3266138_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	4.7e-54	49.2
WP_068434882.1\|3266148_3266553_-	twin-arginine translocase subunit TatB	A0A1B1IVT0	uncultured_Mediterranean_phage	6.8e-06	41.4
WP_068434884.1\|3266568_3266808_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_068437889.1\|3266901_3267252_-	YbaN family protein	NA	NA	NA	NA
WP_068434885.1\|3267282_3267933_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.4e-42	48.8
WP_068434886.1\|3267929_3268742_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.4e-33	35.0
WP_068434888.1\|3268738_3269425_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_068434890.1\|3269421_3270441_-	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	1.5e-22	43.5

DBSCAN-SWA_11

4041242 : 4079854

Ochrobactrum_phage(15.38%)

capsid,head,plate,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068436123.1\|4041242_4042091_+	ParB N-terminal domain-containing protein	R9U496	Rhizobium_phage	9.5e-18	29.4
WP_068436124.1\|4042093_4043524_+\|transposase	Mu transposase C-terminal domain-containing protein	A0A1B0T6N2	Pelagibaca_phage	1.3e-107	44.9
WP_068436126.1\|4043571_4044309_+	ATP-binding protein	A0A0A1IVZ3	Pseudomonas_phage	5.7e-59	49.4
WP_068436127.1\|4044311_4044965_+	hypothetical protein	A0A1B0T6M0	Pelagibaca_phage	5.1e-27	38.9
WP_068436129.1\|4044954_4045347_+	hypothetical protein	A0A1B0T6G8	Thiobacimonas_phage	4.4e-18	41.0
WP_068436131.1\|4045339_4045804_+	hypothetical protein	NA	NA	NA	NA
WP_068436133.1\|4045800_4046256_+	hypothetical protein	NA	NA	NA	NA
WP_156428790.1\|4046243_4046384_+	hypothetical protein	NA	NA	NA	NA
WP_068436135.1\|4046395_4047259_+	DUF3164 family protein	Q5ZR10	Pseudomonas_phage	1.2e-31	38.2
WP_068436137.1\|4047263_4047554_+	hypothetical protein	NA	NA	NA	NA
WP_068436138.1\|4047556_4047844_+	hypothetical protein	NA	NA	NA	NA
WP_068436140.1\|4047856_4048342_+	hypothetical protein	NA	NA	NA	NA
WP_068438029.1\|4048517_4049030_+	helix-turn-helix transcriptional regulator	Q8W6G2	Sinorhizobium_phage	1.9e-21	44.1
WP_068436141.1\|4049087_4050230_+	hypothetical protein	NA	NA	NA	NA
WP_068436142.1\|4050233_4050509_+	hypothetical protein	NA	NA	NA	NA
WP_156428791.1\|4050514_4050718_+	hypothetical protein	NA	NA	NA	NA
WP_068436145.1\|4050719_4051445_+	DUF2786 domain-containing protein	A0A219VHD3	Ochrobactrum_phage	4.6e-13	35.2
WP_068436147.1\|4051459_4052071_-	hypothetical protein	NA	NA	NA	NA
WP_068436149.1\|4052148_4052781_+	regulatory protein GemA	NA	NA	NA	NA
WP_068436150.1\|4052829_4053033_+	hypothetical protein	NA	NA	NA	NA
WP_068436154.1\|4053297_4053579_+	hypothetical protein	NA	NA	NA	NA
WP_068436155.1\|4053581_4053788_+	hypothetical protein	NA	NA	NA	NA
WP_068436157.1\|4053788_4054208_+	hypothetical protein	A0A219VHE2	Ochrobactrum_phage	5.4e-06	45.9
WP_068436159.1\|4054533_4055274_+	transglycosylase SLT domain-containing protein	M4R0Y9	Tetraselmis_viridis_virus	1.2e-37	53.2
WP_068436161.1\|4055270_4055807_+	hypothetical protein	NA	NA	NA	NA
WP_068436162.1\|4055832_4056210_+	hypothetical protein	NA	NA	NA	NA
WP_068436163.1\|4056209_4056512_+	hypothetical protein	NA	NA	NA	NA
WP_068436165.1\|4056515_4057190_+	DUF3486 family protein	NA	NA	NA	NA
WP_068436169.1\|4057324_4058962_+	hypothetical protein	A0A219VH72	Ochrobactrum_phage	1.3e-111	44.2
WP_068436171.1\|4058961_4060527_+	DUF935 domain-containing protein	A0A2P9JZI9	Alteromonadaceae_phage	1.3e-105	42.8
WP_068436173.1\|4060527_4061811_+\|capsid	minor capsid protein	A0A219VH74	Ochrobactrum_phage	3.0e-63	37.9
WP_172821941.1\|4062198_4063383_+	hypothetical protein	J9SH47	Pseudomonas_phage	5.8e-21	29.3
WP_068436176.1\|4063383_4063791_+	hypothetical protein	M4ST95	Rhodobacter_phage	4.4e-29	55.7
WP_068436178.1\|4063801_4064695_+\|head	Mu-like prophage major head subunit gpT family protein	M4SRT6	Rhodobacter_phage	1.2e-98	56.2
WP_068436180.1\|4064706_4064934_+	hypothetical protein	NA	NA	NA	NA
WP_068436182.1\|4065013_4065436_+	DUF1320 domain-containing protein	NA	NA	NA	NA
WP_068436184.1\|4065435_4065936_+	phage virion morphogenesis protein	A0A1B1P725	Rhodovulum_phage	4.4e-23	47.7
WP_068436185.1\|4065932_4066514_+	DUF1834 family protein	NA	NA	NA	NA
WP_156428876.1\|4066525_4066732_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_068436188.1\|4066735_4068208_+\|tail	phage tail sheath subtilisin-like domain-containing protein	M1Q565	Vibrio_phage	4.6e-84	38.4
WP_068436190.1\|4068232_4068577_+\|tail	phage tail tube protein	NA	NA	NA	NA
WP_068436192.1\|4068588_4068930_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_068436194.1\|4069004_4070750_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_068436196.1\|4070749_4071967_+	DNA circularization N-terminal domain-containing protein	S5FUX4	Shigella_phage	3.7e-23	27.0
WP_068436198.1\|4071959_4073030_+	hypothetical protein	M4M9L5	Vibrio_phage	5.3e-42	34.1
WP_068436200.1\|4073020_4073581_+\|plate	phage baseplate assembly protein	Q8W617	Enterobacteria_phage	1.0e-07	48.4
WP_068436202.1\|4073580_4074054_+	phage GP46 family protein	B5TAA8	Burkholderia_phage	1.4e-05	33.6
WP_068436204.1\|4074050_4075109_+\|plate	baseplate J/gp47 family protein	A0A2I7S9E5	Vibrio_phage	7.7e-25	32.0
WP_068436206.1\|4075108_4075747_+	DUF2313 domain-containing protein	NA	NA	NA	NA
WP_068436208.1\|4075746_4076430_+	hypothetical protein	M1FN94	Enterobacteria_phage	7.4e-13	41.2
WP_068436210.1\|4076432_4077374_+	hypothetical protein	NA	NA	NA	NA
WP_082700744.1\|4077590_4077896_+	hypothetical protein	NA	NA	NA	NA
WP_068438032.1\|4078046_4078868_+	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	1.9e-92	62.8
WP_156428594.1\|4078902_4079854_-\|transposase	IS630 family transposase	A0A2P0VP61	Tetraselmis_virus	1.1e-14	28.6

DBSCAN-SWA_12

4762466 : 4773032

Acanthamoeba_polyphaga_mimivirus(12.5%)

integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068437147.1\|4762466_4765175_-	type I DNA topoisomerase	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	4.0e-94	34.1
WP_082700663.1\|4765560_4766748_+\|integrase	integrase arm-type DNA-binding domain-containing protein	NA	NA	NA	NA
WP_068437151.1\|4766813_4767098_+	hypothetical protein	NA	NA	NA	NA
WP_052004201.1\|4767148_4767451_+	ArsR family transcriptional regulator	NA	NA	NA	NA
WP_068438186.1\|4767492_4767912_-	helix-turn-helix transcriptional regulator	Q8W6G2	Sinorhizobium_phage	2.2e-20	43.9
WP_082700664.1\|4768020_4768434_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.4e-22	50.8
WP_068437153.1\|4768423_4768702_-	HU family DNA-binding protein	B5TA87	Burkholderia_phage	2.4e-18	55.6
WP_068438188.1\|4768780_4769128_-	hypothetical protein	NA	NA	NA	NA
WP_156428832.1\|4769622_4769994_-	hypothetical protein	NA	NA	NA	NA
WP_082700665.1\|4770133_4770604_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.0e-21	39.8
WP_068437168.1\|4770610_4771888_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	2.2e-87	42.8
WP_082700666.1\|4772165_4772447_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	9.8e-12	43.3
WP_068437170.1\|4772480_4773032_-	recombinase family protein	A0A219YA40	Aeromonas_phage	2.0e-24	37.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LN997848

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection