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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010965 Bordetella pertussis strain H321 chromosome, complete genome 5 crisprs DEDDh,csa3,cas3,DinG 0 0 26 0

Results visualization

1. NZ_CP010965
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010965_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010965_2 623997-624106 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010965_3 1840996-1841123 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010965_4 2909695-2909811 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010965_5 3625514-3625607 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70035 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77633 : 136107 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_4 233335 : 286923 47 Bacillus_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_5 555307 : 614607 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 620762 : 674503 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723441 : 763391 28 Pseudomonas_phage(33.33%) integrase,tRNA,protease,transposase attL 720689:720707|attR 740577:740595
DBSCAN-SWA_8 773318 : 820936 46 Bovine_alphaherpesvirus(10.0%) tRNA,protease,transposase,holin NA
DBSCAN-SWA_9 996796 : 1099189 93 Bacillus_virus(27.27%) tRNA,transposase NA
DBSCAN-SWA_10 1129575 : 1199496 51 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_11 1240567 : 1369579 107 Bacillus_virus(14.29%) tRNA,transposase NA
DBSCAN-SWA_12 1449256 : 1513471 60 Salmonella_phage(16.67%) tRNA,protease,transposase NA
DBSCAN-SWA_13 1743205 : 1791220 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_14 1852782 : 1912052 51 Klosneuvirus(40.0%) tRNA,protease,transposase NA
DBSCAN-SWA_15 1922292 : 1979789 56 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_16 1982892 : 2053034 60 Vibrio_phage(25.0%) transposase NA
DBSCAN-SWA_17 2248273 : 2309621 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_18 2330412 : 2401566 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2497394 : 2556175 49 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_20 2608711 : 2675211 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2874599 : 2947925 52 Catovirus(22.22%) tRNA,protease,transposase NA
DBSCAN-SWA_22 2959650 : 3009263 42 uncultured_Mediterranean_phage(50.0%) tRNA,transposase,holin NA
DBSCAN-SWA_23 3030214 : 3102708 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3116215 : 3169733 44 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_25 3234191 : 3307353 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_26 3318640 : 3419802 108 uncultured_Caudovirales_phage(14.29%) transposase,terminase,tRNA,protease,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage