CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013690	Myroides odoratimimus strain PR63039 chromosome, complete genome	9 crisprs	RT,DEDDh,WYL,cas3,csa3,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,PD-DExK,Csx27,cas13b	0	13	7	0
NZ_CP013691	Myroides odoratimimus strain PR63039 plasmid p63039, complete sequence	0 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013690_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013690_1

1697085-1697174

Orphan

Consensus_repeat	Method
TTTTTATTTGATGGTTATTTGATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013690_1

>merge|NZ_CP013690|1|1697085-1697174|CRISPRCasFinder
TTTTTATTTGATGGTTATTTGATACAAACCTAGTTTTAAAAGTTAAACTACTTAAAATCAGTTGTTTTTTTATTTGATGGTTATTTGATA

>NZ_CP013690|1|1|1697085-1697174|CRISPRCasFinder
TTTTTATTTGATGGTTATTTGATA	CAAACCTAGTTTTAAAAGTTAAACTACTTAAAATCAGTTGTT
TTTTTATTTGATGGTTATTTGATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013690.1\|WP_006260546.1\|1702206_1702494_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP013690.1\|WP_058699243.1\|1687964_1691702_+\|Eco57I-restriction-modification-methylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|369456
NZ_CP013690.1\|WP_131540521.1\|1686401_1687019_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006257444.1\|1703840_1704242_-\|methylmalonyl-CoA-epimerase	unknown	unknown	gnl\|CDD\|319912
NZ_CP013690.1\|WP_006260539.1\|1695393_1696509_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP013690.1\|WP_058699240.1\|1685340_1686186_+\|toprim-domain-containing-protein	unknown	unknown	gnl\|CDD\|379044
NZ_CP013690.1\|WP_006260545.1\|1700866_1702108_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273716
NZ_CP013690.1\|WP_006260543.1\|1699365_1699665_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184361
NZ_CP013690.1\|WP_058699244.1\|1692069_1692924_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_039328803.1\|1697922_1698435_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006257441.1\|1704312_1704705_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|376719
NZ_CP013690.1\|WP_039328812.1\|1702585_1703410_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699242.1\|1687026_1687491_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699238.1\|1683536_1683800_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP013690.1\|WP_006260542.1\|1698437_1699364_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|367497
NZ_CP013690.1\|WP_039328805.1\|1699763_1700672_-\|toprim-domain-containing-protein	unknown	unknown	gnl\|CDD\|379044
NZ_CP013690.1\|WP_058699245.1\|1693081_1693687_+\|master-DNA-invertase-Mpi-family-serine-type-recombinase	unknown	unknown	gnl\|CDD\|184041
NZ_CP013690.1\|WP_039852038.1\|1693971_1695198_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271185
NZ_CP013690.1\|WP_039328801.1\|1697267_1697738_-\|JAB-domain-containing-protein	unknown	unknown	gnl\|CDD\|163702
NZ_CP013690.1\|WP_058699239.1\|1683899_1685138_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225913

Protein	Function_ID	Function_description	E-value
NZ_CP013690.1\|WP_058699243.1\|1687964_1691702_+\|Eco57I-restriction-modification-methylase-domain-containing-protein	gnl\|CDD\|369456	pfam07669, Eco57I, Eco57I restriction-modification methylase. homologs of the Escherichia coli Eco57I restriction-modification methylase are found in several phylogenetically diverse bacteria. The structure of TaqI has been solved.	4.19757e-11
NZ_CP013690.1\|WP_006260546.1\|1702206_1702494_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.84193e-06
NZ_CP013690.1\|WP_058699240.1\|1685340_1686186_+\|toprim-domain-containing-protein	gnl\|CDD\|379044	pfam13155, Toprim_2, Toprim-like. This is a family or Toprim-like proteins.	5.49931e-11
NZ_CP013690.1\|WP_006260539.1\|1695393_1696509_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	1.2142e-35
NZ_CP013690.1\|WP_006260545.1\|1700866_1702108_-\|hypothetical-protein	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	0.00192142
NZ_CP013690.1\|WP_006260543.1\|1699365_1699665_-\|hypothetical-protein	gnl\|CDD\|184361	PRK13877, PRK13877, conjugal transfer transcriptional regulator TraJ.	0.00014702
NZ_CP013690.1\|WP_006257441.1\|1704312_1704705_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|376719	pfam02033, RBFA, Ribosome-binding factor A.	3.51365e-31
NZ_CP013690.1\|WP_006257444.1\|1703840_1704242_-\|methylmalonyl-CoA-epimerase	gnl\|CDD\|319912	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE). MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.	4.01437e-55
NZ_CP013690.1\|WP_039328805.1\|1699763_1700672_-\|toprim-domain-containing-protein	gnl\|CDD\|379044	pfam13155, Toprim_2, Toprim-like. This is a family or Toprim-like proteins.	2.26785e-15
NZ_CP013690.1\|WP_058699238.1\|1683536_1683800_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	0.000525257
NZ_CP013690.1\|WP_006260542.1\|1698437_1699364_-\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	7.30017e-13
NZ_CP013690.1\|WP_058699245.1\|1693081_1693687_+\|master-DNA-invertase-Mpi-family-serine-type-recombinase	gnl\|CDD\|184041	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase.	2.12242e-118
NZ_CP013690.1\|WP_039852038.1\|1693971_1695198_+\|site-specific-integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.20379e-33
NZ_CP013690.1\|WP_039328801.1\|1697267_1697738_-\|JAB-domain-containing-protein	gnl\|CDD\|163702	cd08071, MPN_DUF2466, Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.	1.21465e-46
NZ_CP013690.1\|WP_058699239.1\|1683899_1685138_+\|hypothetical-protein	gnl\|CDD\|225913	COG3378, COG3378, Phage associated DNA primase [General function prediction only].	1.75084e-05

>NZ_CP013690.1|WP_006260539.1|1695393_1696509_+|Fic-family-protein
MDYNLEKAVDYHYGVFPPKSIDYALFIQELVRATDALARFDQMLKNLHNTEILLAPLRNQEAVISSRIEGTISTMDEILQYEADHEGEDITTAKTDVIETILYQRALKNAQSALESGYDFSLSFLKQMHQQLLYLGRGANKSPGEFKKEQNYLADRLKREIQFIPIRPENLVDGLEQLFKFLENSDFPPLIKTAIMHLEFEALHPFKDGNGRIGRMLITLNLWREKILSEPHFYISGYFEENKDEYIEQMRNVSKTKDWNEWILFFLKAVENQAIKNLEIAESIKSLYETTKTEFSELLSSKWNIEILDFIFTYPVFRNNKFVSTTKIPNATAVLMIKKLVDNGYLVLREESSGRRAAMYSFEPLMKLVRV
>NZ_CP013690.1|WP_039852038.1|1693971_1695198_+|site-specific-integrase
MKTSLKIVLKKTKLSDGTYPINLRVTINRRSKFYKTPYSTAPKFWNAKVGEFTSKFPNFLQANRILSTLKQDASKVLDLMIEQEKEFTLEVFDSLLRPEKVEIVKFVAFFQNRIEQFKEAGQVSSASSYNDSLKALKRFKPGVIKYEFTQIDYSFLVAFEADLRSRGCTNGGIGIYMRNIRAIYNSAIKSKIASLENYPFRDYVISKLKSTKIKKALTKEELQLLLDYDFSENTEGAKVLYTYLFSFFCRGMNFTDIAELKWDDINSNRFSYIRNKTGVAINVKIPENKDLDTILNYFRIYRPFDTDYIFSILDKDLSLYTKEELRARKSSVRDYYNKQLNIIAKECGIKTKITFYTARHTFATLSLKKGVNLYMLKQAFGHQSIKTTEAYVEDFNREELDQAFENLF
>NZ_CP013690.1|WP_058699245.1|1693081_1693687_+|master-DNA-invertase-Mpi-family-serine-type-recombinase
MIYGYIRVSTDKQTVENQRFEINHFCEKQDVVVNKWIEETISGSKQVDERKLGKLLKKMKKGDILICSELSRLGRNLLMIMGVLNECMNRDIHVWTIKDNYRLGSDINSKVLAFAFGLSAEIERNLISQRTKEALARKKAEGVILGRPIGSKSARTKLTGQEKKIKELLDKNVSYSAIGRILGVHRLTVTSFVKNNSSLFT
>NZ_CP013690.1|WP_058699244.1|1692069_1692924_-|hypothetical-protein
MEQRIKSKIEAVGTPLKDWDINIYRGILTGYNEAFIIDGEKRDELIAADPKSAEIIRPLLRGRDIKRYSYEFADLYIITTFPSLKIDIEKYPAVKEHLMSFGYDRLKQTGDKGSRKKTKNQWFETQDTIAYLDDFFKQKIVWAETMRIRKDNTERFPRFSYTTESLYTDKTCFIAVGKDLKYVLAFLNSIVGRYQISQTVSMMDNGGYLMQKIYIEQIKIATLVDQTTKKKLTELVDSLLKSPDDDQADEFENQINDIVFNSFGITLHEQKYLDKKLAETLVRV
>NZ_CP013690.1|WP_058699243.1|1687964_1691702_+|Eco57I-restriction-modification-methylase-domain-containing-protein
MGAISITKALNPAYRKFKPVYNDIDKFKVALLNCLEAIEISDKQNESEEHIKEPIKLFLKSTFYQDNLINTKGRIDLAIYLGDTAKTDIGVIIEAKRPSNKAEFISKDNLNKKALQELLLYYLRERIDQKNNNIKHLIITNGLEWFFFKAEDFYSLFYKNSSLVKEYIAFRDGLKDTSRNELFYDEIASKYIKEIQDKLPFVHLELNKEELNSLNETKTTEIYKLFSNVHLLGHSFGNDSNKLNESFYKELLHIIGLEEVKESSKKVIIRKSEKDRDYASLLENTIFTLEDKDYLHRVKGFSGVEDKSFAIGLEICINWINRILFLKLLESQLVSYNNSEDYRFLNFTFLDGYDALNDLFFSALAKPLPERHVKYKDKFKNIPYLNSSLFEHSELEKQAFDISALKDEEMEIFSLTVLKDASGNRLKGKLSTLKYIFLFLDAYDFSADANTDFENRQENKTLINASVLGLIFEKINGYKDGSFYTPGYITMFMCKEAIRKAVVDKFKQEYNGTIETFEDVKDYCSQYFKKADLVKFNQTINSLKICDPAVGSGHFLVSALNEVIAIKSELNILCNEEGNRIPCEISIEQDELYIAYNEGELFEYQRHDVNSLTIQKTLFHEKQSVIENCLFGVDINPNSVNICRLRLWIELLKNAYYTSTGELQTLPNIDINIKCGNSLISRFSLEDSLKAAFKNKEVIYSIEDYKMAVNNYKKTNSKTKKIEIQNIIDTIKSNFKTTLNNKTKEDIERVSNKYETERQRLINLELFGEKIKKVEKDNLKKLKIRADKANLRKEEILNNVIYQDSFEWRFEFPEVLDDEGNYIGFDVVIGNPPYIQLQKMGKASDVLQQLSYLTFARTGDIYSLFYELGNNILKNKGVLIFITSNKWMRAAYGESLRKYLIDYTNPLILIDFGGIQVFDSATVDTNILMFTKEKNRQQTQACIVKGKVLNNLSIYFEQFSHLTDFQSSESWVVLSPIEKQIIEKIEAAGTPLKEWNININYGIKTGFNEAFIISKEKRKELIEKDPKSVEIIRPILRGRDIKRYGYDFADKYLICARLIAEIPINYPAINEHLTAYIGSKQLGDNSTTKVFKRPWWSWMQEPINYWDNFFGQKIIYPNMTKFLPFYLDDKSFMHNDKSFMITGENIAYLTAFLNSSLFKYCFIDNFPELQGGTRELRKVFLDKIPVLQVSKNINLEFEKLVSEVQELKSNQLCTTEIELEIDRRIFELYSLSEEEKDIIGFIEIK
>NZ_CP013690.1|WP_058699242.1|1687026_1687491_-|hypothetical-protein
MDIKYFAPFLNYIFYDKLNINYKSLDKQELSPRFFSALAQIEKNKPSLYILEKVDLAFKQLEKEKIQDDMYLYLSTKVDIVLESFFTKIAFQNEVNKYDLESEQINALQTHYNFLAYTFFSMIILQFNYQNSTLTIQEFLIVLQQAQNHKTMWE
>NZ_CP013690.1|WP_131540521.1|1686401_1687019_+|hypothetical-protein
MKISTIRLSMSVIGQINQLKEKYELKNQAEAVELVFNFIEKYGVDVKREFVNNTLDNLLLTMARVDKETSELQQLLINLEKSSDKSNKTIVSMLRHNEKNYLVPILLERQSASNQIVENNSYIQTENKALFEETIKNKEKEVLKLQNLVDQLQYEINRKQVSIDEGQRDLEVTKRHLKALKSQFKRSSLTGKYSLSITEKEYHKL
>NZ_CP013690.1|WP_058699240.1|1685340_1686186_+|toprim-domain-containing-protein
MTCDEAKKISLGSILDKIGGIRMKQNSRELWYKSPFRKEVTASFKIDLVKNVWFDHGEGVGGNVLDLVMRYNQCNLKQALKFLASDSFSFHQPIFLEHISEVVKNYEIKVIKPLTNIKLFNYIHSRCIDVGLVKKYCIEVHYCLNGRLFYAIGFKNVLGGYELRSKYFKGCLVAKSYSWICNSRKKVVVLEGWTDFLSLLSLYPSIEKKLDFIVLNSVSNKDSIVGELDNYNVIYLCLDNDNSGELTTKSIIDVYPNKSKDIRGIFTGYKDINEFLSSNNI
>NZ_CP013690.1|WP_058699239.1|1683899_1685138_+|hypothetical-protein
MNLDSAEFIRVGTAYYAIIERPTLSKTTEKVMLPWNKETIVNDFGKDFISNIKKYYGFCCIPQHINYNREIGDFYNIYHPIDYQVQRFNDNLDFLESKLVYTLDFIRHIFGDQYQLGLDYFKILLEYPTQVLPVLVLVSKARETGKSTMLKYLRKIFSFNATYINAESFVNNFNSDLDGKLLVLIDEVVTDNQQITERIKFLSTADRNKIERKGRDKEEVESFYKFVMTSNFEDSFMKIDREEIRFWVRKIPQIEKNPDFLDLLFKEIPDFLNYLHTIPYSTTKKTRMWFTPEQIRTDALVKLMNSDKSKLQDEVLELLREIQERFEEKKICLTPMETCAIIKKLNKRSHIEANDVRTIFKSWGFVPSNNSNKYLGYDYQSYGEFTRLDRKGRYYEIELSKIARFFDDSDDR
>NZ_CP013690.1|WP_058699238.1|1683536_1683800_+|helix-turn-helix-domain-containing-protein
MSANVLNEKVQSISDQSQEVLVSTFFPTGDDRMSQQEVASMFDRTVQTIINWKNKGKIPYYEIDGRPIFSRKQLIQIALKNQHLLNP
>NZ_CP013690.1|WP_039328801.1|1697267_1697738_-|JAB-domain-containing-protein
METTVLNKDWLIASEVELIYKSKVKASKRPQITSSYSAYQIALKAWDGNKIELLEQFKVLMLSNNNKVLGVLEASTGGITATIVDLRIIFSALLKANATAFIIIHNHPSGKLDPSDADRQITRKIKEASKILDITLLDHLIITEESYYSFADEGTL
>NZ_CP013690.1|WP_039328803.1|1697922_1698435_-|hypothetical-protein
MAKKQPTLTELTELLFQQVVHLQEKLKQNITLQTQLSNRINNIEVKVNVSELHKIESNNRQRLQDDFTAFQSTLYDTKEDLLKIYRAISHKKMFYIIALNIFLLLTSGLSIYVAIKKSIHYSDYNQLIENNKKSNLELMYLNQFFKENPKNFEVYKKWKISSENNTKKPL
>NZ_CP013690.1|WP_006260542.1|1698437_1699364_-|relaxase/mobilization-nuclease-domain-containing-protein
MIAKAKTCIGGAALFNYVINPNKGYELARNNLSGETPKDMYQTMQILQNQNTRCKNNTISVVISPTIEDSRKMTDQDLENLVKDFLVGLKLNPKDAQYIAYLHTEKEHKHIHILINRIDENGKALKDNYIGFQAQSIAHEIALKYNWTSIRQENLNRKELLKTNQKQTAEIIKKAHYFVLKERPKNLDQYINMMLAHQIEVKPTVNKQGNIQGYRFIHLPTNTNLKASEVDRNLKLNELFENKIPKPNNDLFHTVLYKDQDKQICFENWNTNTVSLFSFLNAYGNYYEDYMPDITKKKKRKQTQTLNL
>NZ_CP013690.1|WP_006260543.1|1699365_1699665_-|hypothetical-protein
MKREHKIEFRVTLTESLLIKNKANKIGCSVSEYLRSTALGYSVSYKLTQDEIETYKLLNKFADNFRRIGNLFKLGDTTKVKESTIETANLIRAHLEKLK
>NZ_CP013690.1|WP_039328805.1|1699763_1700672_-|toprim-domain-containing-protein
MNTQEAKNISIISILDSLGIKPTKINDKQAWYHSPFRAENTPSFSVSVTKNVFYDFGDSTYKGNVIDFVMLYYKCDIKEALKILANNSFSVHQQLFNPQVNQDEKDYEITAIKPLRNKYLIYYIKQRGLCIKTTQRYCKEIHYILKDKAYYAIGFQNELDGVELRNKYVQMCFGSKYPTYINNDSSTVFLFEAFIDFLSFITLKPNLEHRFDYIILNSVNTLESTLIQSSNKFLYKTLDDSETFESKYKTIVACFDNDTAGDKATEKLIAAFPLITKDARAKYKDYKDVNDYLLSINRDKLT
>NZ_CP013690.1|WP_006260545.1|1700866_1702108_-|hypothetical-protein
MNTTATEYIRIGTEYYAIRKKNVNGKEIIVERKLWRKSEIITDFGKDIIKELPKFFGYKCEPNHIHYTHFIGDYFNSYSPILYNIDTTSELSLNSLKEQIPITYYFLQHIFGNQYLLAIDYFKILLFYPEQILPIIVLVSRNRETGKTTFLNWIKEIFDKNAVFVKANAFTEKFNSEMDSKLLLLIEEVKSENKDIVEAIKYISTAMYQSIEYKGQEKVEQKSFLKIIMTSNHEHNFLKIDKEETRFWVIKVPPIRKRSTEFFTKLIQEIPIFLNYLYRVPFTTEKKTRMWFTPETLHTEALHKLKHDVDLQNKNLVLDILDIIFNEFDMDQIDTTPSDINALLNYYNRGHNITMREIQTILENIALVRSTNSNNYERVKIEDSTLKRTIHKGKYYRISKETLLNQMTDEINN
>NZ_CP013690.1|WP_006260546.1|1702206_1702494_-|helix-turn-helix-domain-containing-protein
MTTLKIIQELNEIKLMITKGNQFQKEIFTIKDLMAYTGFSDSTIHKLTSKNLIPHHKPTNGTLFFDRLEIVEWIKQYRVFTDQEVLSQFSKQLKK
>NZ_CP013690.1|WP_039328812.1|1702585_1703410_-|hypothetical-protein
MNTIIETPFFFFHQKLEKLKSVTLSKKFTYIIAALLPIISLVTSTFQLPYFYSISKWYILLPLTALICSILLLSAAINFHKGQNIFLISHLSLIYKESFKSFKNSKEYLLISPSKKTITINITTPSKKKQEQKKDNVFVFSTAHQAIIKETLYELKKEVINDDTTMEDFKRVIESCISKKTDNPDSSIKLELQSQHCAMFLEAFFIPFVHLFTLHKTTLKESCRYFKYATVEDYSAINYDSINKKGRKLITNAHKETYAKILENVKSQLSKKLS
>NZ_CP013690.1|WP_006257444.1|1703840_1704242_-|methylmalonyl-CoA-epimerase
MRKIEHIGIAVKDLEASNALFEKLFGAPAYKEEAVESEGVKTSFFMNGPNKIELLEATNPDSPIAKFLEKKGEGIHHIAFDVEDIEAEMKRLAAEGFTLLNEIPKKGADNKLVAFLHPKTTNGVLIELCQEIK
>NZ_CP013690.1|WP_006257441.1|1704312_1704705_+|30S-ribosome-binding-factor-RbfA
METNRQKKMGALLQKDIVDILQGEVRKNGITNLVISVSKVNITSDLSVARVYLSIFPIDKGEELLKGIKSNAPLIKHELAQRVKHQMRKVPDLLFYVDDSLEYIDQIDKALTGDENPIANPDLLEKRKKK

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Crispr_ID: NZ_CP013690_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013690_2

1703596-1703743

Orphan

Consensus_repeat	Method
GTGGTCCCACCTGGGCTCGAACCAGGGACTTACTGATTATGAGTCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013690_2

>merge|NZ_CP013690|2|1703596-1703743|CRISPRCasFinder
GTGGTCCCACCTGGGCTCGAACCAGGGACTTACTGATTATGAGTCAGTTACTCTAACCAGCTGAGTTATAGGACCGCTCATTTTGAGCGAAAAATTTCGTGGTGGTCCCACCTGGGCTCGAACCAGGGACTTGCTGATTATGAGTCAG

>NZ_CP013690|2|2|1703596-1703743|CRISPRCasFinder
GTGGTCCCACCTGGGCTCGAACCAGGGACTTACTGATTATGAGTCAG	TTACTCTAACCAGCTGAGTTATAGGACCGCTCATTTTGAGCGAAAAATTTCGTG
GTGGTCCCACCTGGGCTCGAACCAGGGACTTGCTGATTATGAGTCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013690.1\|WP_058699247.1\|1708844_1710623_+\|HSP90-family-protein	unknown	unknown	gnl\|CDD\|237603
NZ_CP013690.1\|WP_006260546.1\|1702206_1702494_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP013690.1\|WP_058700020.1\|1712867_1714058_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006260539.1\|1695393_1696509_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP013690.1\|WP_058699248.1\|1710625_1711702_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006260543.1\|1699365_1699665_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184361
NZ_CP013690.1\|WP_006257444.1\|1703840_1704242_-\|methylmalonyl-CoA-epimerase	unknown	unknown	gnl\|CDD\|319912
NZ_CP013690.1\|WP_039328803.1\|1697922_1698435_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006257441.1\|1704312_1704705_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|376719
NZ_CP013690.1\|WP_006257436.1\|1711704_1712766_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006257440.1\|1704706_1705912_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP013690.1\|WP_039328812.1\|1702585_1703410_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_039328805.1\|1699763_1700672_-\|toprim-domain-containing-protein	unknown	unknown	gnl\|CDD\|379044
NZ_CP013690.1\|WP_058699249.1\|1714459_1715458_+\|2-hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|240659
NZ_CP013690.1\|WP_006260542.1\|1698437_1699364_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|367497
NZ_CP013690.1\|WP_058699250.1\|1715557_1717927_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379720
NZ_CP013690.1\|WP_058699246.1\|1706334_1708845_+\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|276807
NZ_CP013690.1\|WP_039852038.1\|1693971_1695198_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271185
NZ_CP013690.1\|WP_039328801.1\|1697267_1697738_-\|JAB-domain-containing-protein	unknown	unknown	gnl\|CDD\|163702
NZ_CP013690.1\|WP_006260545.1\|1700866_1702108_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273716

Protein	Function_ID	Function_description	E-value
NZ_CP013690.1\|WP_058699247.1\|1708844_1710623_+\|HSP90-family-protein	gnl\|CDD\|237603	PRK14083, PRK14083, HSP90 family protein; Provisional.	0
NZ_CP013690.1\|WP_006260546.1\|1702206_1702494_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.84193e-06
NZ_CP013690.1\|WP_006260539.1\|1695393_1696509_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	1.2142e-35
NZ_CP013690.1\|WP_006257441.1\|1704312_1704705_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|376719	pfam02033, RBFA, Ribosome-binding factor A.	3.51365e-31
NZ_CP013690.1\|WP_058699249.1\|1714459_1715458_+\|2-hydroxyacid-dehydrogenase	gnl\|CDD\|240659	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains. D-Lactate dehydrogenase (LDH) catalyzes the interconversion of pyruvate and lactate, and is a member of the 2-hydroxyacid dehydrogenase family. LDH is homologous to D-2-hydroxyisocaproic acid dehydrogenase (D-HicDH) and shares the 2-domain structure of formate dehydrogenase. D-2-hydroxyisocaproate dehydrogenase-like (HicDH) proteins are NAD-dependent members of the hydroxycarboxylate dehydrogenase family, and share the Rossmann fold typical of many NAD binding proteins. HicDH from Lactobacillus casei forms a monomer and catalyzes the reaction R-CO-COO(-) + NADH + H+ to R-COH-COO(-) + NAD+. D-HicDH, like the structurally distinct L-HicDH, exhibits low side-chain R specificity, accepting a wide range of 2-oxocarboxylic acid side chains. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain.	0
NZ_CP013690.1\|WP_006260543.1\|1699365_1699665_-\|hypothetical-protein	gnl\|CDD\|184361	PRK13877, PRK13877, conjugal transfer transcriptional regulator TraJ.	0.00014702
NZ_CP013690.1\|WP_006257440.1\|1704706_1705912_+\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	1.29143e-38
NZ_CP013690.1\|WP_006257444.1\|1703840_1704242_-\|methylmalonyl-CoA-epimerase	gnl\|CDD\|319912	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE). MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.	4.01437e-55
NZ_CP013690.1\|WP_039328805.1\|1699763_1700672_-\|toprim-domain-containing-protein	gnl\|CDD\|379044	pfam13155, Toprim_2, Toprim-like. This is a family or Toprim-like proteins.	2.26785e-15
NZ_CP013690.1\|WP_006260542.1\|1698437_1699364_-\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	7.30017e-13
NZ_CP013690.1\|WP_058699250.1\|1715557_1717927_-\|TonB-dependent-receptor	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	1.05147e-77
NZ_CP013690.1\|WP_058699246.1\|1706334_1708845_+\|sel1-repeat-family-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	1.6814e-28
NZ_CP013690.1\|WP_039852038.1\|1693971_1695198_+\|site-specific-integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.20379e-33
NZ_CP013690.1\|WP_039328801.1\|1697267_1697738_-\|JAB-domain-containing-protein	gnl\|CDD\|163702	cd08071, MPN_DUF2466, Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.	1.21465e-46
NZ_CP013690.1\|WP_006260545.1\|1700866_1702108_-\|hypothetical-protein	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	0.00192142

>NZ_CP013690.1|WP_039328812.1|1702585_1703410_-|hypothetical-protein
MNTIIETPFFFFHQKLEKLKSVTLSKKFTYIIAALLPIISLVTSTFQLPYFYSISKWYILLPLTALICSILLLSAAINFHKGQNIFLISHLSLIYKESFKSFKNSKEYLLISPSKKTITINITTPSKKKQEQKKDNVFVFSTAHQAIIKETLYELKKEVINDDTTMEDFKRVIESCISKKTDNPDSSIKLELQSQHCAMFLEAFFIPFVHLFTLHKTTLKESCRYFKYATVEDYSAINYDSINKKGRKLITNAHKETYAKILENVKSQLSKKLS
>NZ_CP013690.1|WP_006260546.1|1702206_1702494_-|helix-turn-helix-domain-containing-protein
MTTLKIIQELNEIKLMITKGNQFQKEIFTIKDLMAYTGFSDSTIHKLTSKNLIPHHKPTNGTLFFDRLEIVEWIKQYRVFTDQEVLSQFSKQLKK
>NZ_CP013690.1|WP_006260545.1|1700866_1702108_-|hypothetical-protein
MNTTATEYIRIGTEYYAIRKKNVNGKEIIVERKLWRKSEIITDFGKDIIKELPKFFGYKCEPNHIHYTHFIGDYFNSYSPILYNIDTTSELSLNSLKEQIPITYYFLQHIFGNQYLLAIDYFKILLFYPEQILPIIVLVSRNRETGKTTFLNWIKEIFDKNAVFVKANAFTEKFNSEMDSKLLLLIEEVKSENKDIVEAIKYISTAMYQSIEYKGQEKVEQKSFLKIIMTSNHEHNFLKIDKEETRFWVIKVPPIRKRSTEFFTKLIQEIPIFLNYLYRVPFTTEKKTRMWFTPETLHTEALHKLKHDVDLQNKNLVLDILDIIFNEFDMDQIDTTPSDINALLNYYNRGHNITMREIQTILENIALVRSTNSNNYERVKIEDSTLKRTIHKGKYYRISKETLLNQMTDEINN
>NZ_CP013690.1|WP_039328805.1|1699763_1700672_-|toprim-domain-containing-protein
MNTQEAKNISIISILDSLGIKPTKINDKQAWYHSPFRAENTPSFSVSVTKNVFYDFGDSTYKGNVIDFVMLYYKCDIKEALKILANNSFSVHQQLFNPQVNQDEKDYEITAIKPLRNKYLIYYIKQRGLCIKTTQRYCKEIHYILKDKAYYAIGFQNELDGVELRNKYVQMCFGSKYPTYINNDSSTVFLFEAFIDFLSFITLKPNLEHRFDYIILNSVNTLESTLIQSSNKFLYKTLDDSETFESKYKTIVACFDNDTAGDKATEKLIAAFPLITKDARAKYKDYKDVNDYLLSINRDKLT
>NZ_CP013690.1|WP_006260543.1|1699365_1699665_-|hypothetical-protein
MKREHKIEFRVTLTESLLIKNKANKIGCSVSEYLRSTALGYSVSYKLTQDEIETYKLLNKFADNFRRIGNLFKLGDTTKVKESTIETANLIRAHLEKLK
>NZ_CP013690.1|WP_006260542.1|1698437_1699364_-|relaxase/mobilization-nuclease-domain-containing-protein
MIAKAKTCIGGAALFNYVINPNKGYELARNNLSGETPKDMYQTMQILQNQNTRCKNNTISVVISPTIEDSRKMTDQDLENLVKDFLVGLKLNPKDAQYIAYLHTEKEHKHIHILINRIDENGKALKDNYIGFQAQSIAHEIALKYNWTSIRQENLNRKELLKTNQKQTAEIIKKAHYFVLKERPKNLDQYINMMLAHQIEVKPTVNKQGNIQGYRFIHLPTNTNLKASEVDRNLKLNELFENKIPKPNNDLFHTVLYKDQDKQICFENWNTNTVSLFSFLNAYGNYYEDYMPDITKKKKRKQTQTLNL
>NZ_CP013690.1|WP_039328803.1|1697922_1698435_-|hypothetical-protein
MAKKQPTLTELTELLFQQVVHLQEKLKQNITLQTQLSNRINNIEVKVNVSELHKIESNNRQRLQDDFTAFQSTLYDTKEDLLKIYRAISHKKMFYIIALNIFLLLTSGLSIYVAIKKSIHYSDYNQLIENNKKSNLELMYLNQFFKENPKNFEVYKKWKISSENNTKKPL
>NZ_CP013690.1|WP_039328801.1|1697267_1697738_-|JAB-domain-containing-protein
METTVLNKDWLIASEVELIYKSKVKASKRPQITSSYSAYQIALKAWDGNKIELLEQFKVLMLSNNNKVLGVLEASTGGITATIVDLRIIFSALLKANATAFIIIHNHPSGKLDPSDADRQITRKIKEASKILDITLLDHLIITEESYYSFADEGTL
>NZ_CP013690.1|WP_006260539.1|1695393_1696509_+|Fic-family-protein
MDYNLEKAVDYHYGVFPPKSIDYALFIQELVRATDALARFDQMLKNLHNTEILLAPLRNQEAVISSRIEGTISTMDEILQYEADHEGEDITTAKTDVIETILYQRALKNAQSALESGYDFSLSFLKQMHQQLLYLGRGANKSPGEFKKEQNYLADRLKREIQFIPIRPENLVDGLEQLFKFLENSDFPPLIKTAIMHLEFEALHPFKDGNGRIGRMLITLNLWREKILSEPHFYISGYFEENKDEYIEQMRNVSKTKDWNEWILFFLKAVENQAIKNLEIAESIKSLYETTKTEFSELLSSKWNIEILDFIFTYPVFRNNKFVSTTKIPNATAVLMIKKLVDNGYLVLREESSGRRAAMYSFEPLMKLVRV
>NZ_CP013690.1|WP_039852038.1|1693971_1695198_+|site-specific-integrase
MKTSLKIVLKKTKLSDGTYPINLRVTINRRSKFYKTPYSTAPKFWNAKVGEFTSKFPNFLQANRILSTLKQDASKVLDLMIEQEKEFTLEVFDSLLRPEKVEIVKFVAFFQNRIEQFKEAGQVSSASSYNDSLKALKRFKPGVIKYEFTQIDYSFLVAFEADLRSRGCTNGGIGIYMRNIRAIYNSAIKSKIASLENYPFRDYVISKLKSTKIKKALTKEELQLLLDYDFSENTEGAKVLYTYLFSFFCRGMNFTDIAELKWDDINSNRFSYIRNKTGVAINVKIPENKDLDTILNYFRIYRPFDTDYIFSILDKDLSLYTKEELRARKSSVRDYYNKQLNIIAKECGIKTKITFYTARHTFATLSLKKGVNLYMLKQAFGHQSIKTTEAYVEDFNREELDQAFENLF
>NZ_CP013690.1|WP_006257444.1|1703840_1704242_-|methylmalonyl-CoA-epimerase
MRKIEHIGIAVKDLEASNALFEKLFGAPAYKEEAVESEGVKTSFFMNGPNKIELLEATNPDSPIAKFLEKKGEGIHHIAFDVEDIEAEMKRLAAEGFTLLNEIPKKGADNKLVAFLHPKTTNGVLIELCQEIK
>NZ_CP013690.1|WP_006257441.1|1704312_1704705_+|30S-ribosome-binding-factor-RbfA
METNRQKKMGALLQKDIVDILQGEVRKNGITNLVISVSKVNITSDLSVARVYLSIFPIDKGEELLKGIKSNAPLIKHELAQRVKHQMRKVPDLLFYVDDSLEYIDQIDKALTGDENPIANPDLLEKRKKK
>NZ_CP013690.1|WP_006257440.1|1704706_1705912_+|ABC-transporter-permease
MKFSLYIAKRYAFSKSKSKAINVITTISSVGIVVSAMAMFIVLSVFSGLKAYSLSFVDDLDPDLKVFTPKGKSFVVEDRQILDLEESGYFKGVAKVVEDRLLFSFKDKQAVSMIKGIDSDFVNVTDFDEKVEYGSWLEPDTDDAVVGVGMSHLLSMGLFDTENAFEALALKPGKGTIENPEDAFIKRHLNPTGVYVLGNDDLDNKYVFVDIDNARALLNIPTTEVTNLELAIAEGVSEGKAIQKIKEVLGEEYIVKNKTQLNDGLYRMLNMENLVVYLIFVLVVIMALFTLVGSMIMIILEKQPNIKTLNQIGVPVSDLRKIFLFQGLIICVLGSVIGLVLGGIVVSLQVAFGFISIREGLAYPVAFNWVNIFVVLVSIIVLGLLASLVSSSRVNNSYLKL
>NZ_CP013690.1|WP_058699246.1|1706334_1708845_+|sel1-repeat-family-protein
MEYLNYVREFANDSVSITAHAEEFLNKNDYSNPHEWYKAHAICMLAEQIGKNNEVLEKLYDQLNEDSNCLHSSMSLSDEDYADWFTDVKALNDIFIDRGYKHAYAYQYELFINSRYGFRDEERAVGYLKKGVELGDDLCKCYVGYAMYYGTQGYEKDEEGAVTILKMAVDGERANIANLFLLNIEFRGCTSGEEGKAVVEKFSELINVKKRGLYILADYYLREDDNVSAEAALKDGIANNSAYCKYLLGMMACNGRFEELGYTEEQGRELLADAYDYGITHAGYVLGYSYFYPRTEGLEAKQEAGIEMFKKAIAYYSSEATLELAIIYLYNEDFKDIAKGMEFLDRGVEYKYDRAMSEKGFVLLDFEEVERDVEGGKAMLEQAMAAGNDYAPYRLGLAYQNADFEEEADYEKALYLFELAAERNNLSGLELAGRYHRFGYAGEPNLEKAVSYYQRGIEYFNSNYCKVELAMLLERGEGIEQDVAEAARLYEDALNEGYTYAAIRLGFIYEEGSVGEPDYAKARAHFELAAEQDMAEGVYHLARCYRYGTGGEENQEKSFELFSKALELGFVDANVDIALFYEEGINGGEPDYEKAFEYMIVGAEAGFNYAQYKVGVYYSYGYLAETNVELGKEWFEKSVESGSPLGMLSLGDYYLYGYGEEKEYDKAFEYYIAAEERNYISEGLGICYQFGLGVEVDEVKAFHYYKLAADRQYDSAIFRLGLCYFYGNGTERDLVEAFHYLKQVADRGNMDAASYVGLMLVKGDGAEKDPEYGVSYLIQAAEAGFDMAQYELANCYLKGEGVPQSDDSAMEWYQQAAENGNEDAQKIVGGPRKRRR
>NZ_CP013690.1|WP_058699247.1|1708844_1710623_+|HSP90-family-protein
MENQKQFQFQVNMKGMIELLSEHIYSSPTVFVRELLQNGMDAVTVRKGIDESFKGKINITFEGDRLIFQDNGVGLTQDDVHQFLSVIGQSSKRGELADKDLIGKFGIGLLSCLVVSEAIVVESRSLYKDESVRWTGRADGTYEVEMIPLLDEVGTKVILDAKKAWRSLFKRDEVKQNVLFYGSALPIEVNLIEKGEVEQCLDGNPVWLDNESSKEQLLEYGKEVFKTKFLDVFRLYSEAGEIQGVAYIIPNKVNTTATKEHKIFLKKMYLCDQATNLLPEWTSFVRCIFNSNALQPTASRESLMNNAVLQESKKELSECFKDYLKTLSITNPEILEKIISIHHMFIKALAASDNEIMTMFEDYLPFETNQGMMAFGEIKETYKNIYYTPSLDDYRQIRRIAGSQNKLVINAAYSYETDLIEKLKRSHAELKLERIAPNDILEEFEDAIEDSQRIENFIDKANKILKRHFCRAEVKRFEPKDTTAIYIANEDALTSKNIQSLSQTSNPFASTLQHFKKKEEVMPTLCFNQQSELVEKVMLIDDDELFEALINVLYVQALMLGGYTINKREMDTFNDALYQFMILGMSNFLPKF
>NZ_CP013690.1|WP_058699248.1|1710625_1711702_+|hypothetical-protein
MYRLEIQKLLLAIDENLDDQELCLSFIRQGIQIADKHNDLDWGVELRYSLIHEERATSGCTESVLAFAWILDVCDRYPERFHESEFLLEYEWMLCSAYSNASLSTEQILAVADDLYARLERNHISKRGYYFTMAEYVQNIGDYAKGEEYIKLAMQEPYDDENIEIMEYDYRIENLVLMGRFDEAIVLMEQVELKKLSDFALPFETYCAMAYCMAKVEDVRASIYLEKAKASFETLREVNSSMLYSMTRLMYAMYLLKDSVMWSTFERIADWEIDAEDDLQFMLSRHAALICAQGGVIALDLSPRLSYYEPNGKYDLTQLYEYYDNIATRLGLQFDSRNGSDFCSKEYKELKMMNGIKV
>NZ_CP013690.1|WP_006257436.1|1711704_1712766_+|hypothetical-protein
MNYNLEIQKILLKVEELPSFSDKVKALKEAIALADKHNDLDWGFDLRLTLIQKERNTSKCEESFPAFAWILNASDSNEDYFDESEFLWEYKWMFCSAYRNASISLEQIKEIGDDLRRRLTKNGYSDRAYYNVMTGYALHLRDYKLAQEYIRLADEEILDDMANCPACELDTKVETLLDLGHIDESLVKAQDLINKKLTCYSMPFQTFCSFANKLYDAGDDRASIYFDKALEEYHAHDQYDSSVGYSMGELVSYMAKTKHPEMWSFFSRICEWQLGAEDIHIYNFAKAMAPLMKGEGEVTLSLSPLLPYYQESGVYKLSDLYTYFKDTAYDYANRFDQRNHNTNFIQEVDKALN
>NZ_CP013690.1|WP_058700020.1|1712867_1714058_-|hypothetical-protein
MIAKIQLKLNNDVLLTVIKMVKHTDDYIVENVTDALLISIKEDLINKLEDKAKTIQKQVSILDHNKKHSLVLKYHEAYSMYKLLEAVHEKELFNDNLHIKKIKRLISELHNKLDIFAKEEDITIIDEDLVEDNPIEVTETKPERILVLEGVEDAHTVDPNQVEIPILFDMTDAFSDHEEEINMPNEELSHEVVSTMPNTLEELFTPSVEEEIIPDNELPLDHNSYLEKEMDVTEETIGSTEESNTTSETFPTQETIYSTEEDLFMTSIPESQPKLDWERITTEDPSPSSEKKNTVEQVTFSDPKYNELFNIAKTGINVDEQDLINHEPIISSQPEQEMNTLLTEEEDIPYSQDVMQIEIFDVEMIEVEPSEQKEKKEKKKEKKIVKAEQDGQISLF
>NZ_CP013690.1|WP_058699249.1|1714459_1715458_+|2-hydroxyacid-dehydrogenase
MKIAFFSTQPYDVTFFDKENKQFGFELEYFETGLDEQTVNVITEGTDVVCVFVNDKVDAEVISNLAKKDVKYIALRCAGFNNVDLDAAHQHNIRVCRVPAYSPEAVAEHTLAMLFTINRKIHKAYNRVREQNFSLNGLLGTNIYKKTVGIIGTGNIGAVFCRMMKALGTEVLAYDIYKNEQLEAEGIRYVELEELFTKSDIISLHCPLTPDTMHLINEDTISKMKDGVMLINTSRGKLIDTHAIIQGLRAKKIGALGIDVYEQEEKVFFRDLSGTILEDERLQLLTSFPNVLVTAHQAFFTDEALTQIAFITLDNLKQLKTNNEIVGRNAEL
>NZ_CP013690.1|WP_058699250.1|1715557_1717927_-|TonB-dependent-receptor
MKNLFTLLLTILCSQFILAQSSIKGTVVDQTNTPVDYAEIQLFRPNDTFVKQSFSDETGLFSMEDIAKGDYVLKIFHLGQLVSEQQLAVQSDVDLKNISVKNDQQLDEIVLHAEKRLVERKVDRLVYNTANSIASQGMDALEALATTPMVKVQNDKISISGKNNVRIMVDDRMLELQGDALTNYLRTLRSDDIEKIEVITTPSAKYEASGNAGIINIILKKNKRMGVYGTVSSNYSYNNYNSGGGNGSLNYQNKKWSVMLKGNINNSNNSNTNDNTYQDDKRYLGNNSLNESSYKNRGASITTNYQLTDNAVIGGSYNYTKFSGDPRAFTASTYKSYPFTATDSIINSVNRSYTKNNYHTANLFFDQKLDTLGSKIAIGANYFSNSPDQSFDIKEFDNSSVLRRYNTYTNTLKYSVYSLNADLTYHLPWAEVEFGAKYTTYDNKAQVTYFNIKNGNATLDPLKSNRFNYTEDNYAAYLSFTKQLTEKWSVKGGMRYEQTEAKGHQLDNNEKFTKSYGKWFPTAYVSFTPNETHSFSFNYSKRINRPYSNVLNPFKYYSNSYTYHQGNPELNPSYTNNYELSYVYNGALSVNLNYYHMTDQFDYMNKYIDGVFMSSTYNMLNSDNYGVDVSYNNAITAWWETNSGLEYIISSPYYRNEAATQVGLKGNLFDYYSQNTFSVNNAKTLKLLLNWYHQIPHKEDNTRYSSYSSLSFGAKLALLDKKLNVNMTMQDIFNTGKSNGTSYYKDNVQSFKNSWNSRRFSISASYTFGNSKNKKAIQEANFEDKNRSN

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Crispr_ID: NZ_CP013690_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013690_3

2980373-2980504

Unclear

Consensus_repeat	Method
ATTGTATTTTGACCTAGTGCTAATGGAGTGATACGACATATATTATGTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013690_3

>merge|NZ_CP013690|3|2980373-2980504|CRISPRCasFinder
ATTGTATTTTGACCTAGTGCTAATGGAGTGATACGACATATATTATGTGACACGGAAGATATTCCGTCTCTACCTTATGTAGATTGTATTTTGACCTAGTGTTAATGGAGTGATACGACATATATTATGTGA

>NZ_CP013690|3|3|2980373-2980504|CRISPRCasFinder
ATTGTATTTTGACCTAGTGCTAATGGAGTGATACGACATATATTATGTGA	CACGGAAGATATTCCGTCTCTACCTTATGTAG
ATTGTATTTTGACCTAGTGTTAATGGAGTGATACGACATATATTATGTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013690.1\|WP_058699556.1\|2965428_2966601_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|100032
NZ_CP013690.1\|WP_058699557.1\|2983605_2985780_-\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|234750
NZ_CP013690.1\|WP_006259081.1\|2968796_2970815_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP013690.1\|WP_006259065.1\|2991567_2992110_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006259078.1\|2974409_2974709_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|316153
NZ_CP013690.1\|WP_006261055.1\|2991045_2991540_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699559.1\|2987309_2988575_+\|acetyl-CoA-hydrolase/transferase-family-protein	unknown	unknown	gnl\|CDD\|188463
NZ_CP013690.1\|WP_006263449.1\|2983192_2983606_-\|DUF393-domain-containing-protein	unknown	unknown	gnl\|CDD\|225556
NZ_CP013690.1\|WP_006263448.1\|2980655_2983091_-\|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
NZ_CP013690.1\|WP_006259077.1\|2974723_2975347_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006259067.1\|2990245_2991031_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|179371
NZ_CP013690.1\|WP_058699558.1\|2986159_2986717_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP013690.1\|WP_006259080.1\|2970980_2973020_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP013690.1\|WP_006259076.1\|2975860_2976628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006259075.1\|2976766_2980201_+\|cobalamin-B12-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|239650
NZ_CP013690.1\|WP_058699560.1\|2988734_2990183_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006259079.1\|2973075_2974359_-\|cell-envelope-integrity-protein-CreD	unknown	unknown	gnl\|CDD\|377608
NZ_CP013690.1\|WP_006259083.1\|2966620_2967028_+\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|340815
NZ_CP013690.1\|WP_006259082.1\|2967118_2968612_+\|malate:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|377591
NZ_CP013690.1\|WP_006259070.1\|2986782_2987181_+\|DUF3995-domain-containing-protein	unknown	unknown	gnl\|CDD\|372505

Protein	Function_ID	Function_description	E-value
NZ_CP013690.1\|WP_006263449.1\|2983192_2983606_-\|DUF393-domain-containing-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	4.90956e-39
NZ_CP013690.1\|WP_058699557.1\|2983605_2985780_-\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	2.06417e-118
NZ_CP013690.1\|WP_006259081.1\|2968796_2970815_+\|hypothetical-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	5.45628e-24
NZ_CP013690.1\|WP_006259078.1\|2974409_2974709_-\|transcriptional-regulator	gnl\|CDD\|316153	pfam13601, HTH_34, Winged helix DNA-binding domain.	2.73094e-30
NZ_CP013690.1\|WP_058699559.1\|2987309_2988575_+\|acetyl-CoA-hydrolase/transferase-family-protein	gnl\|CDD\|188463	TIGR03948, hypothetical_protein_FAEPRAM212_02812, butyryl-CoA:acetate CoA-transferase. This enzyme represents one of at least two mechanisms for reclaiming CoA from butyryl-CoA at the end of butyrate biosynthesis (an important process performed by some colonic bacteria), namely transfer of CoA to acetate. An alternate mechanism transfers the butyrate onto inorganic phosphate, after which butyrate kinase transfers the phosphate onto ADP, creating ATP. [Energy metabolism, Fermentation].	2.86566e-103
NZ_CP013690.1\|WP_006263448.1\|2980655_2983091_-\|phenylalanine--tRNA-ligase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
NZ_CP013690.1\|WP_058699556.1\|2965428_2966601_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|100032	cd02196, PurM, PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine biosynthesis, catalyzes the conversion of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, ADP, and Pi, the fifth step in de novo purine biosynthesis. The N-terminal domain of PurM is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP.	4.8341e-72
NZ_CP013690.1\|WP_006259067.1\|2990245_2991031_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|179371	PRK02113, PRK02113, MBL fold metallo-hydrolase.	1.32172e-94
NZ_CP013690.1\|WP_058699558.1\|2986159_2986717_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	3.92545e-19
NZ_CP013690.1\|WP_006259080.1\|2970980_2973020_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	8.12004e-30
NZ_CP013690.1\|WP_006259075.1\|2976766_2980201_+\|cobalamin-B12-binding-domain-containing-protein	gnl\|CDD\|239650	cd03678, MM_CoA_mutase_1, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, unknown subfamily 1; composed of uncharacterized bacterial proteins containing a C-terminal MCM domain. MCM catalyzes the isomerization of methylmalonyl-CoA to succinyl-CoA. The reaction proceeds via radical intermediates beginning with a substrate-induced homolytic cleavage of the Co-C bond of coenzyme B12 to produce cob(II)alamin and the deoxyadenosyl radical. MCM plays an important role in the conversion of propionyl-CoA to succinyl-CoA during the degradation of propionate for the Krebs cycle. In some bacteria, MCM is involved in the reverse metabolic reaction, the rearrangement of succinyl-CoA to methylmalonyl-CoA. Members of this subfamily also contain an N-terminal coenzyme B12 binding domain followed by a domain similar to the E. coli ArgK membrane ATPase.	0
NZ_CP013690.1\|WP_006259079.1\|2973075_2974359_-\|cell-envelope-integrity-protein-CreD	gnl\|CDD\|377608	pfam06123, CreD, Inner membrane protein CreD. This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with an Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA.	1.44951e-122
NZ_CP013690.1\|WP_006259083.1\|2966620_2967028_+\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|340815	cd16964, YqgF, putative pre-16S rRNA nuclease YqgF and RuvX family. Escherichia coli YqgF has been shown to act as a pre-16S rRNA nuclease, presumably as a monomer. It is involved in the processing of pre-16S rRNA during ribosome maturation. The RuvX gene product from Mycobacterium tuberculosis was shown to act, in a dimeric form, as a Holliday junction resolvase (HJR). HJRs endonucleases specifically resolve Holliday junction DNA intermediates during homologous recombination. Holliday junctions are formed by the reciprocal exchange of strands between two DNA duplexes. HJRs occur in archaea, bacteria, and in the mitochondria of certain fungi; they may form homodimers and display structural similarity to RNase H and Hsp70.	7.91736e-42
NZ_CP013690.1\|WP_006259082.1\|2967118_2968612_+\|malate:quinone-oxidoreductase	gnl\|CDD\|377591	pfam06039, Mqo, Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.	0
NZ_CP013690.1\|WP_006259070.1\|2986782_2987181_+\|DUF3995-domain-containing-protein	gnl\|CDD\|372505	pfam13160, DUF3995, Protein of unknown function (DUF3995). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 138 and 149 amino acids in length. There are two completely conserved residues (W and P) that may be functionally important.	1.59098e-20

>NZ_CP013690.1|WP_006259075.1|2976766_2980201_+|cobalamin-B12-binding-domain-containing-protein
MQQNTPYTPTNKVRIVTAAALFDGHDAAINIMRRIIQSTGCEVIHLGHDKSVEEVVNTAIQEDANAIAMTSYQGGHNEYFKYMYDLLQEKGAGHIRIVGGGGGVILPSEIKELMDYGITRLYSPDDGRAMGLQGMINDMVGKADYPTMDLQLPEGKDVYQSLADKDVTTIARLISLAENREEDFLKVFQYDEKKHKNTPILGITGTGGAGKSSMVDELVRRFLIDFPEKTVALVSVDPSKRKTGGALLGDRIRMNSINNPRVFMRSLATRQSNLALSRYVEETLQVLQVANYDLIILETSGIGQSDTEILDHSDASLYIMTPEFGAATQLEKIDMLDFADIVAINKFDKRGALDAIRDVKKQYQRNHNLWDVNPDEMPVFGTIASQFNDPGTNALYKAIMDKVVEKTGADLKSSFEITKEMSEKVFVIPPNRTRYLSEIAENNRKYDETVLTQKEVAQKLYGIFKTVETVAGKLPEIDKSGIVEETIASKDADTQLFINLLLKEFDKVKMNLDPYNWEVILTWDQKVNKYKNPVYSFKVRDKEIKIATHSESLSHLQIPKIALPKYEAWGDILRWSLQENVPGEFPFTSGLYPFKREGEDPTRMFAGEGGPERTNRRFHYVSLGMPAKRLSTAFDSVTLYGNDPGHRPDIYGKIGNAGVSICCLDDAKKLYSGFNLAHALTSVSMTINGPAPMLLGFFMNAAIDQQCEIYIKDNDLVAEVEAKIEAIYKAKGVERPRYNGELPEGNDGLGLMLLGVTGDQVLPKEVYAEIKKNTLSQVRGTVQADILKEDQAQNTCIFSTEFALRLMGDVQEYFIEKNVRNFYSVSISGYHIAEAGANPITQLAFTLANGFTYVEYYLSRGMDINDFGPNLSFFFSNGIDPEYAVIGRVARRIWAKALKNKYGANERAQMLKYHIQTSGRSLHAQEIDFNDIRTTLQALYAIYDNCNSLHTNAYDEAITTPTEESVRRAMAIQLIINKELGLAKNENPIQGSFIIEELTDLVEAAVLAEFDRITERGGVLGAMETMYQRSKIQEESLYYETLKHNGTFPIIGVNTFLSSKGSPTVVPAEVIRATEEEKLFQIKTKENLNKANEALVKEELERIQEVAIQNGNIFEALMDASKVCSLGQITSALFEVGGQYRRNM
>NZ_CP013690.1|WP_006259076.1|2975860_2976628_+|hypothetical-protein
MTQITSYTFSTAKALTAEQNIDYNHQVDQFNVWPAYVLADTVNLTYWDSIYELFADYQFYLLEANVVVGNGNCIPLHLTAEELADLPEGGWDWALEKAVKDHEKGLIPNTLCALQIGLNKNYQGKGISHKLIQYMKSIALSTEMNAFILPIRPNLKTNFPLISMDDYIQWENEEGLPYDAWIRTHIKGGAHIVKICQRSMAVEGSIAEWEEWANMKFRSSGEYILPVLLNPIQIDLEMDKGEYIEPNVWMRYELD
>NZ_CP013690.1|WP_006259077.1|2974723_2975347_-|hypothetical-protein
MTNKAIEDLNQIKSIMERSTKFLSLSGWSGIWVGLCGLIAASVLYYWQTSSTYSYENLTLEDPYQTAYTAEMLLVLAIATFVIAVVGGFFFTIRKTRKQGKSFLNQVTKRLLVRFSIPLIIAGILCLILHKYHLLQFALPTTLLFYGLALFSVQEDTVKEVKAIAALEIVLGLLAFYFLDYTLLLWAIGFGLVHLLYGIILWNKYDK
>NZ_CP013690.1|WP_006259078.1|2974409_2974709_-|transcriptional-regulator
MKFDLEKLNKVFDNRIRVGIMSGLMVNDSLSFKDLKEYLDLTDGNLASHLKNLEESNYITVTKGFVGRKTNTTYTVTEEGKLAFKQHLAYLENLIKKLK
>NZ_CP013690.1|WP_006259079.1|2973075_2974359_-|cell-envelope-integrity-protein-CreD
MKKENYKPMIKGVIISVLSLMLLITLPFISSLISERESFQSEVTTEVTSKWGQKQTIYGPFVLVEYYTNHLTEDGKVMKQLNSYLQTPIKQDFTGDIKTQIKKRSLYEVALYNTNLNVKASFPTLDELASTLNLADKEAFTNAKIVFSVSDSKGFTQEILINKNPQQYFEQDRSLRINSSIAFLSYDINKEDIDLSNINFPIQLKGSTEINFLATAKQTNVNVTSDYKDIKYIGNYLPDNDEKQSVNEHSKWTIFQSIPISSDLNTITQLTDYSFGMKFLQMNDFYSKVNRATKYALLFIGLTFATFFFMENIKNLSINILHYTLVGLALCINFVLLLSFAEYIGFSYAYIISASATIILITSFIFGLSKNKRIAATIFGLLFVLYAFLFFLLQLKEAALIVGSIGLFTIIAILMYFSKRINFTSEE
>NZ_CP013690.1|WP_006259080.1|2970980_2973020_+|two-component-sensor-histidine-kinase
MFKLRVLYFAVLCISMSMIHCTQTETNKEDLKLEEINAFIKSYNRFNPTDKDKAAADSLGNVILNLRNTEQSRNALRKYILLTNADKQYIEELFKRSRKADDKKNEAQAYFLRGKRYAQSFQIDSTYYNYTKAEFLFKSIQDSVNLQEVYSHKAIILLNNKIFTEGQSQILKAMNVNKEHKDARIKYSESIIMANALVGLEQLPEALKQLELSLKLLDNPEIVKFFLPDAIRLNKITIYYNIAEVYIKQGEYKKAQNLIHNVIDKYINESTIYDEMMLAHLLYNLTQADIKSKQYDDVEKNLVRAIDIQLKNKNLQDYNSYKILLAEYFYLIKKEEQGNQLVNEVLEYAHQNNNLGLEKETLTVLLKYKKEQYNTNFVRYEELNKLILDENNVIKNTFARLSFEADSLERANEQLQNQKNIITMVSSALLVLAITIFFVILFRQKAKEVSLVKLFQKDTEKYYDSIINVQNELAEARNIERKEIAKELHDGVLNKLFVTRFLLMQVSKESVETHKDSLINEVKEVEQYIRDVSHVLGHEEDFKNKEFNELIRDLVGIQNRNQVTKFILFMSNDICFSRLSIKFKVHIYRIIQECLQNVQKHAKATECQVSILLREETRFEVIIKDNGVGFDTDIVKRGLGFTNIKARTQLMNSKINISSTEGKGTSISFTIDLNESVEC
>NZ_CP013690.1|WP_006259081.1|2968796_2970815_+|hypothetical-protein
MTSKSLYLILPFWVLVFAIYGCDNSKRNDIINHSIKEFLKNYNTDAVNDLMLKQADSIGKLVLLLPNSRGNREIIKDYINKTKAHKKYCDRLYDYAVEDRDSIDIANAYLLTGQYYLSNLVFDSAYYYYNQAEKLYLIKKDSLNISYTYYIKAYVLNKNGVYSEAEKQILKSIRYNTKEISIRRRHQQYFTIGDVFSGLGMYEDALHYYNQAFELLSDKTILSEESEAYINLSKTYLVDNVAKVYIKQEKYLKAKELLLEGIAKYINFNDVTSERYYAYLAISLASTKLKTNDYKGIHALLNEIIEIGKRNKNRIIIHKAELVLAEYYFVTGQVNLGFPLVERILEEVRSVGDFENQLKALELLISYDSDRSDQFFIEYVEISKRFKGEGNLIQNSFIRIKQEADSLNELNKTLLERNRLLSTITISLFVIVTIILLAYIYHLKIKKIGLIKMFQQDTEQYYNSIINVQKYLAVAKDRERKIIAKELNDGVVNRLFATRFTLMQLKKEEIDNHKDVLVNEVVEVEDYIRNISHSLVNEEGGKVQGFQQLLQELVLVQKRQSNIDFSILIDAKLDLECLDHRKRINIYRSIQEVLLNVALHSNASKCVVDIKLKTPVSFEIAITDNGTGFDTRSIKGGYGLPNVKERIEIIEGKLFVISKKGSGTKILFIIYF
>NZ_CP013690.1|WP_006259082.1|2967118_2968612_+|malate:quinone-oxidoreductase
MSSIQKSEADVVLVGAGIMSATLGVLLKELKPNLKIEVIERLDSAAAESSDAMNNAGTGHSAFCELNYTPEKADGTIDASKAINIVEQFEVSRQFWSYLVNKGVLKNPSNFIHTVPHMSFVWGEDNVNYLRKRYNELQKYPLFQGMEFSDNKEKIKEWAPLIIENRKENEVCAATHMNLGTDVNFGDLTRQLFDHLKSEDGVNMTFNCEVKDITKVGSEWTVSATDSKGQKKVIKSKFVFVGAGGGAILLLQKADIAESKGYGGFPVGGEWLVCRNPEVVKKHMAKVYGKASVGAPPMSVPHLDTRFIDGKHSLLFGPYAGFSTKFLKRGSYWDLIKSLEFNNIGPMLGAGLRNMDLTKYLIEQVLQSSKSRYAALREYYPDAKEEDWKLEKAGQRVQVIKKDKDGKGILQFGTEVVSAADGSIAALLGASPGASTATPIMLKLLSQCFKEEFKSAEWQAKFKEMIPTFGLKLNEHPELVASTRDNTSKTLKIYPYN
>NZ_CP013690.1|WP_006259083.1|2966620_2967028_+|Holliday-junction-resolvase-RuvX
MARLLSIDFGKKRTGIAVSDELQIIASGLTTVDTEQLLPFLKDYFSKEKVEKVIIGEPKRLNNEPSEVVPLLNSFIEKFKTSFPDMPVERIDERFTSKMAFQTMIDSGLKKKQRQNKALIDEIAATIILQDYMRR
>NZ_CP013690.1|WP_058699556.1|2965428_2966601_+|phosphoribosylformylglycinamidine-cyclo-ligase
MSSNNRYALRGVSAEKEDVHNAIKNIDKGLFPKAFCKIIPDHLTGDEDYCLIMHADGAGTKSSLAYMYWKETGDISVWKGIAQDALIMNIDDLLCVGATDNIMLSSTIGRNKNLVPGEVISAIINGTEELINELKSFGVTIHSTGGETADVGDLVRTIIVDSTVTARMKRSDVIDNANIQAGDVIVGLESFGQATYEKGYNGGMGSNGLTSARHDVFDHSLAAKYPESYDSSVPEELVYSGKVHLTDVVEGSPIDAGKLVLSPTRTYAPIIKSILNKYKSDDIHGVIHCSGGAQTKILHFVDKLHIIKDNMFPVPPLFKLIQEQSNTDWREMYQVFNSGHRMELYVRPEVAADIIAISESFNVKAQIVGRVEASEEKKLTITSEYGTFKY
>NZ_CP013690.1|WP_006263448.1|2980655_2983091_-|phenylalanine--tRNA-ligase-subunit-beta
MHISYNWLKQFIKLDITPEETSEILTDLGLEVEGITTYESLKGGLRGVVVGHVLSCTKHPNADKLNVTKVDLGTGEPVQIVCGAPNVAAGQKVPVATIGTELFDAEGNAFQIKKGKIRGEESFGMICSEVELGLGTDGSGILVLEDKWEPGTPAATLFNIATDEVFEIGLTPNRSDAMSHWGVARDLRAGLLQNSKEETQHKELITPSVSKFKVERRTLKIDVSVEDYKKAPRYCGVTISGIEVKPSPDWLQNRLKAIGITPKNNIVDVTNYVLHDLGQPLHAFDAAKIKGGKVIVKTVAAGTKFVTLDGVERTLHEDDLMICDENGPMCMAGVFGGSKSAVSESTSNIFLESAYFNPVTVRKAAKRHGLNTDSSFRFERGVDPAITEYALKHAALLIQQVAGGEITSDIIDLYPKKVEEHSVFLNFNNINRLLGEEISKETIKKILVSLDIKVHSMSDVGIGITVPAYRADVTREIDVIEEILRVYGFNNITFSSKLNATIANSSRTEDHRVTNIVAQQLVAQGFNEIMNNSLTTPDYTELSENIKSNYQVDILNPLSHDLSVMRQSLLFGGLESISYNVNRKRGDLKFFEFGKTYHKMLNNFEEYKRFSVFATGNITKASWNSEQKPISFFDFKGYINGIITRLGLAKVSTQPVESDLFSEGIAYYIGKELIVEFGILKKSVTKHFDIKQEVCYAEFNWDNVLKVVSAKIKIAEINKFPSVKRDYALLINEAVTFEEIYNLVKQVDKAVIKDVTLFDVYQGEKIEDGKKSYAISIIMEDVTKTLTDSQVDKIMGKVKYQLENVLQAQLR
>NZ_CP013690.1|WP_006263449.1|2983192_2983606_-|DUF393-domain-containing-protein
MLDIPRNKKIILFDGVCNLCDSAVNKVIKADHQDQFRFVALDSEKGKEILNYIGIDRTKIDSIVLYEPGVAYFIKSKAAFEIASALGGKYSLIGIFSFLPTGITDALYEYIAKNRYKWYGKKESCMIPSEDIKQKFL
>NZ_CP013690.1|WP_058699557.1|2983605_2985780_-|DNA-mismatch-repair-protein-MutS
MTSINKKTLQDLEFNTVLETVSALCTTEAGKEAAMEICPLKTEAGTMRALKQTSEYVSSFTNNNIIPNHYFDSIDYELKFLGIENSFLEVSSFKKIQTLTDTTITLISYLKKFEEYYPNLYHEAEQTPLEKSILKEIDNVLDKYGEIKDNASLDLLNIRKNINIVRGKINQSFGAALTQYNSSGYLDDIRETVVENRRVLAVIAMHRRKVKGSVLGTSKTGSIVYIEPEATLRFSRELNNLEYEEREEIVRILKNLTDAIRPFRDLLLEYQSFLTYIDVTAGKAKYANKINGLLPEISKEREMYFREAYHPILLLNNRAKNKPTYPQTINLEQNSRIIVISGPNAGGKSITLKTVGLLQLMLQSGLLIPVHERSKTFLFDRILTDIGDNQSIENHLSTYSYRLKNMNYFLKKCNDNTLFLIDEFGTGSDPELGGALAEVFLEEFYDREAYGIITTHYTNLKILADELPNATNANMLFDEKSLEPMYKLNVGQAGSSFTFEVAQKNGIPFSLINRAKKKVEGDKVRFDKTIANLQKERHKLERTSLNLKEEETKARDESKKMETINAKIQEKLERYQELFDSNQRLVALGQRLDDLSEKYFNNKSKKTLFGEVLKVVEIENSKRKKVTIKEKKEKEAQQKELIKEVEQKVEVIRKEKKEEKAKKQLQDAQKKTNFPLKVGDRVRMIDGRSVGTIDVIEKNKATVNYGIFTSKVSLDQLEMVERKK
>NZ_CP013690.1|WP_058699558.1|2986159_2986717_+|Crp/Fnr-family-transcriptional-regulator
MQSNHFVDRLLEDLQDSVIYRTLTKGEEILQLGEVCDYVGIVRKGCLRMYYIDAEGDDVSFAFYLSNHIFTNYEGVLTNAPSQLTIVATKETDVELIRKSDLFAYYETSIEAQLLGRRMAELIFLEAKKRIDFLLFLNPEQRYLQLIESTPEVFKCIPQKYIASYIGVKPQSLSRIRKRLNEKGY
>NZ_CP013690.1|WP_006259070.1|2986782_2987181_+|DUF3995-domain-containing-protein
MSLEVMIKIVNTVIFSFLSAVHIYWALGGTWGVVGVLPTKDGERKLNPSPVGTLVVASGLVVFAEISLGDVLAYKWGYLVIGILFGLRAIGDFNYVGVFKKVKNSVFAKKDTTIFIPLCFYLSLSNIFLYMS
>NZ_CP013690.1|WP_058699559.1|2987309_2988575_+|acetyl-CoA-hydrolase/transferase-family-protein
MKYVSASEAAKVVKSGDRIYVHAAAATPNILTKAISDRAEELRNVEFCHIHTEGAAPYADPALSESFHVNSFFIGKNVRHTIAAGNGSYTPVFLSEVPNLFRKGALKVDVVLIQVSPPDEHGFCSLGTSVEATVAAMECAKVVIAQVNKYMPRTFGDSVLHISKIDMAVEHHTAIYAQKQAVITDTEALIGDHVAALIEDESTLQMGIGSIPNAVLSRLTNHKNLGLHTEMFSDGVIDLIESGVIDCSKKTIAKGRALATFLIGSERLYRFVDNNPFIVMKESSYVNDTAIIRQNPKVVAINSALEVDVTGQICADSLGVHMYSGVGGQMDFVRGASLSKGGKAIIALSSTSNKGHNRIVPFLKQGAGVVTTRAHAQYIVTEYGVADLYGKTLKQRVDAMVEIAHPDFREEILKTYHDSIK
>NZ_CP013690.1|WP_058699560.1|2988734_2990183_-|hypothetical-protein
MKNFAEDLVLNGDRVIEHHPAISDKALKINLNNDIYGTFAEIGAGQETVRHFFRAGGSSRTVAKAMSAYDKVFSDAIYSVEEDGRYVTESRLIKMLDYETRKIEERLIREENPNKTFFSYANTVATIDYAKKNKGHGWVGIMFQTASNQAYNKIVLHIQFKETDSKLQQETLGILGVNLIYGAFYQHHDAKKLIHSLYDHLDKDQIEIDSINFSGPIFETVDNRLMSLQLVKNGMTDAVMFSPSGRSELAANILYKQNILALRGSFRPVTIVNMDMYQKSLDKFMTQNNLAKDNTKVVFEITLSNLLAEGSLDEIDFLDRADLLCSLGQTVMISNFQEYYKLTEYFSKYTDQKIALAMGVSSLLNIFEEKYYTHLTGGILEGLGKLFRNTMKIYLYPMIGNEEQIVDSTNLKVDLHIKELYKFFKKNNQIIDIEDYEKDHLSIFSRDVLKLLQQNQNGWEDKLPEGISKIIQEKELFGYKRK
>NZ_CP013690.1|WP_006259067.1|2990245_2991031_+|MBL-fold-metallo-hydrolase
MWKIYVILEVYFLGTGTSQGIPIIGIDHPVAHSIDPRDKRLRTSVLVKWDEHTILIDCGPDFRQQMLTAGCSKLDAIFFTHEHADHIAGLDEIRPLTILHGSLPIYAQERVIKALERRYDYIFTKEDRYPGAPSVEEHSITSQDTIMIGKKTIIPIDVMHGPLPILGYRLGDLVYITDAKYITDEEVEKIKGCKVLIVNALRIKDHPTHFSLEESLAFIDKIKPEKAYLTHIAQDLGFHKDVENILPKDVYLAYDNLKITI
>NZ_CP013690.1|WP_006261055.1|2991045_2991540_+|hypothetical-protein
MKHKAFFYLFLFSLVILVLLYANNKNMYKMEGKKIEIAHKRIDIVRDSLKEVTKDFNEANYFSIEYNEDAQEYFNYKTIDQSLTSIKEEVLALNHQDNGNPLVPYGVINGEKCVINKVKVLNHRWIIADFYAGAVHGEVLIKYFYTEGKPTEFKTIDTVMYATK
>NZ_CP013690.1|WP_006259065.1|2991567_2992110_+|hypothetical-protein
MKKSISLFVILLLTMTSCDFILKDNKDDNEKGMVITDGSTEIVTLDEDDEVLGCAYSAGYRWSELENNCIRIFEIGFRLNPIGLEEDTTEDNALEDNSVSCFVTYAKDKKKAEIFLPNHKKGIVLELTKDKSAYINDGWELSNEGMVLKHKGETAFTAAKTIELKIINSDQPVEEDVHEE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013690_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013690_4

3055523-3055596

Orphan

Consensus_repeat	Method
TTACTACGGAGGCGCTGCGCTAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013690_4

>merge|NZ_CP013690|4|3055523-3055596|CRISPRCasFinder
TTACTACGGAGGCGCTGCGCTAGGGAGGCGTGCACTCCGCTTCACTTCGTTTACTAGGGAGGCGCTGCGCTAGG

>NZ_CP013690|4|4|3055523-3055596|CRISPRCasFinder
TTACTACGGAGGCGCTGCGCTAGG	GAGGCGTGCACTCCGCTTCACTTCGT
TTACTAGGGAGGCGCTGCGCTAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013690.1\|WP_006259007.1\|3052242_3053037_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP013690.1\|WP_006261105.1\|3053759_3055448_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_CP013690.1\|WP_006261108.1\|3058188_3059715_+\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP013690.1\|WP_006265197.1\|3051130_3051988_+\|DNA-damage-inducible-protein-D	unknown	unknown	gnl\|CDD\|183178
NZ_CP013690.1\|WP_006265200.1\|3059785_3061843_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030
NZ_CP013690.1\|WP_006265192.1\|3047463_3048306_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006265202.1\|3065924_3066836_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006259000.1\|3061842_3062067_+\|DUF3820-family-protein	unknown	unknown	gnl\|CDD\|378970
NZ_CP013690.1\|WP_006265196.1\|3050240_3050798_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006261104.1\|3053179_3053362_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006265195.1\|3049383_3050022_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006258996.1\|3065259_3065817_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006265198.1\|3055842_3056574_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293807
NZ_CP013690.1\|WP_058699569.1\|3056736_3057945_-\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_CP013690.1\|WP_006258997.1\|3064829_3065093_+\|(2Fe-2S)-ferredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239278
NZ_CP013690.1\|WP_006259008.1\|3045743_3045932_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006258999.1\|3062390_3063680_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP013690.1\|WP_006265194.1\|3048559_3049381_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006265201.1\|3063684_3064755_-\|DUF3810-domain-containing-protein	unknown	unknown	gnl\|CDD\|378933
NZ_CP013690.1\|WP_006265193.1\|3048307_3048547_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013690.1\|WP_006259007.1\|3052242_3053037_+\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	7.88185e-28
NZ_CP013690.1\|WP_006261105.1\|3053759_3055448_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP013690.1\|WP_006261108.1\|3058188_3059715_+\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP013690.1\|WP_006265197.1\|3051130_3051988_+\|DNA-damage-inducible-protein-D	gnl\|CDD\|183178	PRK11525, dinD, DNA-damage-inducible protein D; Provisional.	2.1339e-135
NZ_CP013690.1\|WP_058699569.1\|3056736_3057945_-\|sodium/glutamate-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	7.99612e-146
NZ_CP013690.1\|WP_006258999.1\|3062390_3063680_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	2.54859e-135
NZ_CP013690.1\|WP_006265200.1\|3059785_3061843_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	8.82286e-08
NZ_CP013690.1\|WP_006259000.1\|3061842_3062067_+\|DUF3820-family-protein	gnl\|CDD\|378970	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor. QSregVF_b is a family of short Pseudomonas proteins that are potential virulence factors. The structure of UniProtKB:Q9HY15 a secreted protein has been solved and deposited as Structure 3npd, from pfam13652. It is predicted that these two adjacent proteins form a single transcriptional unit based on the prediction that together they interact with their adjacent protein PotD, which is the putrescine-binding periplasmic protein in the polyamine uptake system comprising PotABCD. These two adjacent proteins are predicted to be quroum-sensing-regulated virulence factors.	1.96299e-35
NZ_CP013690.1\|WP_006265201.1\|3063684_3064755_-\|DUF3810-domain-containing-protein	gnl\|CDD\|378933	pfam12725, DUF3810, Protein of unknown function (DUF3810). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 333 and 377 amino acids in length. There is a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterized family of peptidase enzymes.	9.78067e-101
NZ_CP013690.1\|WP_006258997.1\|3064829_3065093_+\|(2Fe-2S)-ferredoxin-domain-containing-protein	gnl\|CDD\|239278	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE). TRX-like Fds are soluble low-potential electron carriers containing a single [2Fe-2S] cluster. The exact role of TRX-like Fd is still unclear. It has been suggested that it may be involved in nitrogen fixation. Its homologous domains in large redox enzymes (such as Nuo and hydrogenases) function as electron carriers.	1.27385e-09
NZ_CP013690.1\|WP_006265198.1\|3055842_3056574_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.82981e-48

>NZ_CP013690.1|WP_006261105.1|3053759_3055448_+|energy-dependent-translational-throttle-protein-EttA
MSDDKKVIFSMSKVSKTYSSTNKTVLKDIYLSFFYGAKIGILGLNGSGKSSLLKIIAGVDKNYQGDVVFAPGYTVGYLEQEPQLDETKTVIEIVKEGAAETVAILDEFNQINDMFGLPEVYEDADKMQKLMDRQAELQDKIDAVGGWELDTKLAIAMDALRTPEPDTPINILSGGERRRVALCRLLLQNPDVLLLDEPTNHLDAESVHWLEQHLQQYSGTVIAVTHDRYFLDNVAGWILELDRGEGIPWKGNYSSWLDQKSTRLAQEEKVASKRRKNLERELDWVRQGAKGRQTKQKARLQNYDKLLNEDQKVLEEKLEIYIPNGPRLGTNVIEAKGVAKAFGDKLLYDDLNFTLPQAGIVGIIGPNGAGKSTIFRMIMGEQQPDAGTFAIGDTVKIAYVDQAHSNIDPEKSIWENFCDGQELIMMGGRQVNSRAYLSRFNFGGSEQNKKVSTLSGGERNRLHLAMTLREEGNVLLLDEPTNDLDVNTLRALEEGLENFAGCAVVISHDRWFLDRICTHILAFEGDSQVYFFEGSFSDYEENRKKRLGDVAPTRLKYKKLVR
>NZ_CP013690.1|WP_006261104.1|3053179_3053362_-|hypothetical-protein
MTENLLFAKSETCENNHENHYYDPSIDAYVCSTCNAISPANSIYDFEEKADDEYELHIGI
>NZ_CP013690.1|WP_006259007.1|3052242_3053037_+|DUF1275-domain-containing-protein
MLSHRGKERSFMQNLRLAVLLSFVGGVVNVSGFLALKLMTTNVTGYLSNFAQEVLTFNKQAILKSVLLLVSFFLGSFTSHVILQLQKLIWNKVYFTVPLILEAILLGGVAYLEGDILFQYPMKIAYVLLFAMGLQNSLVTFISKAVVRTTHITGIVTDLGIETARLLFNLTRVNLRNLLLSHIGLKLAIVFSFGVGGITAAFCFEYLHLRTLYIGVVVILFTTVYDYLVVKMMRVLEEGKQIVDWSKKVVTKDYKVYHILRRKK
>NZ_CP013690.1|WP_006265197.1|3051130_3051988_+|DNA-damage-inducible-protein-D
MGSDMQNINESLFEQIRQIDEAGNEYWSARQFAKVIEYVDFRNFERVLNKAKQACENSGYAVADHIVDFNEMVSIGSGAVREMPSYKLSRYACYLVVQNADPSKEIVAQGQTYFAVQTRIQEIRQMDEYANLSTEDERRLFLRNELAKHNTQLAAAAKDAGVIKPIDYAIFQNHGYKGLYGGLDAKAIHKKKGLSKSQQILDHMGSTELAANLFRATQTEDKLRREDIQGKAKANETHYEVGAKVRKTIEELGGMMPEDLPTVESVKKIEKQQTKMLNKKKDNDE
>NZ_CP013690.1|WP_006265196.1|3050240_3050798_+|hypothetical-protein
MNDNNLKTYKTEEISFEIIKEADKAYNYQGKLTPILDQLEGDFNQNTIDQIVLWKVNRYAEVDDSRMKVLNQIDKNSLELDVDLTREVLESLLACTGIQLAMASTILRFKNPHVYQILDQRVFRFIYGISLQEELRREKDQVKVYLDYLVKLKEVCNELSIVFEDSDRVLYELDKKYNKHIKLKY
>NZ_CP013690.1|WP_006265195.1|3049383_3050022_+|hypothetical-protein
MNTYFKQLESILTSNEFRDRLEQVNDNFPNLKQEHLIRDVILSMYNQQNTPSYRAFSEHPRRWELSYETKAKKKIGRVDLSFNKAGELDGAYKIELKFFFTKDIKNGRDSSVEKNFIKKECDLLMIIVQEFLDVEAKVAYDQTWGIDTNLLRYQLGANAREKQIFLKSKAKFKSLEEQFECVENGQMHDMIVVEVRKPYKTRYTFCFLERVK
>NZ_CP013690.1|WP_006265194.1|3048559_3049381_+|hypothetical-protein
MAIFKGSFIEFEKYVGPTTNKIITRLGKELKKTQKSCQNHQLGGEYCGVWKRLDAAHFSSKGRDRKSIIKVLLDSNFKIDDDLYEIDLDKFVSVFEDEHRMGELDSNLIMLCRQHHVAYDLPYKGKSFGGDYEVVEIAENDSITPLLLNKDISEHKTQLVKNAILEAVRHLAINSKNCSYAKFTNMKWQFDIKEEKLTQDLYFIFYTPRDYSFDIAKLTQQEIERITSDLKQKEYDDRKVEKSFVFLFDGEYYIEKNTNCKMEIIYSNHFEIS
>NZ_CP013690.1|WP_006265193.1|3048307_3048547_+|hypothetical-protein
MGILSVLSFLFSTDPKKEIEECKKRIENFESIKRTVRANVKNKKQKHYHDHARERIKTLDYQISKEREKIAAYRKKVKK
>NZ_CP013690.1|WP_006265192.1|3047463_3048306_+|hypothetical-protein
MSRDKDESVFSKVSGFFGNKEKKEEVFEAKVDKEGIFEGIKNIFFGEKKEEIIDIEAFEVVASDMEIIITERSINTEGKLIELKSTGTVENLEEKGLLDKLSDTASVTVGAVRDTVSIAVSTVVNTASESWDFTTEKLGVAKQATIEFSSSTADSLVHFTKEVGRRYDEIEISPKFYSLINTMDLVLVISSLQLLVEKQRKGSKEFIALSAVIGLLILLERSKEGMKKEMGFVEVNEELSHDLSSLLKSVTFKDMVETAEPILLIIPNGNYILLILKLFV
>NZ_CP013690.1|WP_006259008.1|3045743_3045932_+|hypothetical-protein
MPNNLNKNKILGYATLIMIMMGILLICLGAFKYSEIAGWGFTAVGIGFFAIAWVFNALKGRV
>NZ_CP013690.1|WP_006265198.1|3055842_3056574_+|MBL-fold-metallo-hydrolase
MNIEILHINAQSAEGQPTVFNPVVVGFADGTSYLIDCGFTYNFQEFKQELMHLGLMVADLKGIIISHDDIDHLEGLHKFKEEYVSLEVISSAIESDSVSGRVESERLIQVKESLTHIPEEMKGGVNDFIKQLEGIKRFEVTQTLEDGQFFKDTLQVIATPGHTKGHISFFDTESKTLIAADAIVVEEGEFNIANPQFTLDMEAALASVEKIKNLKPNRVICYHGGVVEEGIEEKLDRLIKRYC
>NZ_CP013690.1|WP_058699569.1|3056736_3057945_-|sodium/glutamate-symporter
MDFGIYETLMLACFVLLLGHFVVQKVNFFQKFNIPEPVVGGFIVAMFSWIAYSVTGKEFTIDENIQQGMMFIFFSSIGLNADFRSLIKGGKGLIIFLVIATVFIICQNFLGVTLAYLLELDPRFGLIAGSISLTGGHGTAGGWADTFMASATPLIGAKDIGMACATFGLILGGTIGGPLAYKLLRKNNFKELSPEQIQQNDETHEISVPSVVTDKKVNYKSIMLTITFLSICLVVGQYLAEWNTQYAFKLPTFVWCLFIGVVIRNVLPHLFKVKMHDESIEILGNAGLSIFLACALMSLKIWTVTDLALPILLILLIQVTMMLFFAYFITYRAMGKEYDAIVLSAGHCGFGLGATATAVANIQAVTSRFGPSPKAFLIIPMVGAFFIDILNALILNVFVTFL
>NZ_CP013690.1|WP_006261108.1|3058188_3059715_+|glutamine-hydrolyzing-GMP-synthase
MQHNVLILDFGSQYTQLIARRVRELNIFCEILPYNDMPKDLTEYKAVILSGSPYSVRSEEALHPDLSNIKGKMPLLAVCYGAQYLAHFFGGEVAPSDTREYGRANLDFIAEDAFFKDIPHNSQVWMSHSDTIKQLPTNGVLLASTKDVKNAAYKVEGEQTYAIQFHPEVYHSTDGAQLLKNFLVDIAGVSQDFTPNAFVEETITDLRNKIGSEKVVLALSGGVDSTVAAVLLHKAIGENLHCIFVNNGLLRKNEFQNVLNQYNGMGLNVKGVDATDRFMEALAGLEDPEQKRKAIGKSFIDVFDDESKLIEDATFLGQGTIYPDVIESISVKGPSATIKSHHNVGGLPDFMKLKVVEPLRMLFKDEVRRVGASLGIDPELLGRHPFPGPGLAIRILGDITQEKVRLLQEVDAIFIEGLREHGLYNSVWQAGAILLPVNSVGVMGDERTYEKVVALRAVASTDGMTADWVHLPYEFLMEISNKIINRVKGVNRVVYDISSKPPATIEWE
>NZ_CP013690.1|WP_006265200.1|3059785_3061843_+|LysM-peptidoglycan-binding-domain-containing-protein
MKKKIFIALTAFVFTSSVLAQSGSFIQYRVNKGDTVSKISRDYDIPVSEILKYNPDAKNGINENSFLLIPTKDFVEKEKNKGANPLLKNDEKTKNTSTSKGTHTVQPKETMYSISKKYNVSINDLHTWNPSLKETGLLADSEIIVAPNTKKSSSMDVTQYEQDKPKKIPATLPSSTADTIKDINNIYYRNIDVEPKATLYSLAVTYNTSVQRLLELNPELKDGLKSGQTIKVPAYGFQAKAKVVEVTPETPKENKFIRLIVEPQQTLYSISRKYDVPIKEIIKLNPDLQQGLKSGMELILPYKEGLDIAVEENMPKEENEGYLTVDTTGGYVDLSNSISRLDHKELALLLPFNIDKLGDNIDAKLSSDGFLNMTLDFYSGAKMAVEYAESLNLPLTVNVYDSSESKNSSGVKSLFNSKDFSNTDVIIGPFYQSNVDAAVKALPNDKVILVSPLSNEKATASNRLVQTMPYSNVLKNQLLEYFKKTGAKITVIVDDKKQSTKQFMNQYFPEIKMISTSQIGEIDKTLVKDKKNVFVLDSNSIASALLFTDKLKNKTKDYDIQIASFDKSDVFDYSEIRIETLVDLKYTFPSVTRDSRESRSESLFGQEYKNRYNVYPNRFATRGFDVTLDVIFRMFQKEGFIPTIGKKSQEIENRFSYSRNPEGTLRNSGVYLLQYDTDLNVKVLN
>NZ_CP013690.1|WP_006259000.1|3061842_3062067_+|DUF3820-family-protein
MIDNEKYLVELAHTKMPYGKYEGRYLIDLPEHYIVWYHNKGFPKGKLGEQLGLIYELKLNGLEPLIRNIRNNFK
>NZ_CP013690.1|WP_006258999.1|3062390_3063680_+|NAD(P)/FAD-dependent-oxidoreductase
MMNIPTSKRPRVVIIGGGFGGLALAKKLKNKNFQVVLLDKHNYHTFQPLLYQVATGGLESGSIAYPIRKVVQNYEEIYFRLANVQRIDTENKKVVADIGTIFYDYVVIATGSKTNFFGNENITKNSMAMKTIPESLDIRSLVLENFEEALQTTDDQEQKALMNFVIVGAGPTGVELAGALAEMKKHVLPKDYPDLDFNKMEINVIQGANKVLDAMSEKSSRKAQEFLENLGVKVYLGEIVTDYKGKKVYTKSGKEFTAETVIWTAGVMGATVDGFDATVIQRGNRIKVNEYNQVEGFTDIFAIGDVATMMTDKTPMGHPMMAQPAIQQGELLANNLIRLRDGQPLKSFVYNDKGSMATIGRNKAVVDLPKFQFSGFFAWFVWMFVHLMSLIGFRNKLVVFWNWMYNYMMFDRQARLIIRPFKNKVDERE
>NZ_CP013690.1|WP_006265201.1|3063684_3064755_-|DUF3810-domain-containing-protein
MKLRYWLILFVCSILTFNIITRFPDAIEAFYTNGFYFYLCNVFNTITSLFPFSVGDILYTIIGLFLIHKFYQVFKKYKGWKKITMACAALTFKCIVIFYILFNIGWGLNNFRPTLESQLGIERGYDQEKLLNLTTKLIQRANLLQLAITNDSTIAVKLKQDINTILADSKKGIEQITFLHQIDNTNSLAIKESLFSLPLTYMGFSGYINPFTLEAQVNNKIPTLTMIVTASHEMSHQLGFAKESDANFIGFMAAYNQKDTAYQYAAIIYALRYCVSNINDRDSVEVKALFETIHQGVKDNLNENIIFWSEYKNITDSFFKVFYNGFLKLNNQKEGLQSYNKFVDLLINYDLKNPIL
>NZ_CP013690.1|WP_006258997.1|3064829_3065093_+|(2Fe-2S)-ferredoxin-domain-containing-protein
MSKVKKGERTIFVCDGKKCCRYNEETKSCFKALLEESGLSNDYSLCKMKCQGMCKSAPVVYISSHDKYKKEVGVKKAKKIFQEYIIA
>NZ_CP013690.1|WP_006258996.1|3065259_3065817_+|hypothetical-protein
MKRVLFTLVICLMTITSFAQKTIDNPKKFLASLAAHCGKAYAGQIVSPNVPADFKDKELLMKVISCKEEEVKISFFVGEDLSRTWVFTLENGLVKLKHDHRHQDGTPDDITMYGGTATNTGFADMQFFPSDQETVDMMSTIAGNVWWVTIKDNTYTYNLKRVDSTGYFSASFDLSNEVKTDKMPW
>NZ_CP013690.1|WP_006265202.1|3065924_3066836_+|hypothetical-protein
MKINRIAKRGLFEYQKDRNEEGLMLYDFLEERVIRFADYKEWRINAISPDGKYIAINKISETTRAFKTDFAILRVDTQEQVFFTNTYFIYDAEFSLDSDKVLIVAHNKKPFCLDLATKEIIAEMPKNIRTYQGSFNKEKNQFIAPSETFKDTLYLFDFVSGETEKIKTSLKEKIGKVEYTNDSQHLIALTESSIVYCLDLSYKVIWSVDFNTLLESPVRINSSSMLLSEDNQYLMLEASSTETNNWGAEFVLNVKTGVLVNTIEGYQYRGRIQDALFGNEVLLYTYHTLDMLTGEVKELELKR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013690_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013690_5

3841825-3846204

TypeI-B

Consensus_repeat	Method
CTTTTAACTGCACCATATAGGTATTGAAAT	PILER-CR
CTTTTAACTGCACCATATAGGTATTGAAAT	CRISPRCasFinder
CTTTTAACTGCACCATATAGGTATTGAAAT	CRT

66 spacers

cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NZ_CP013690_5

>merge|NZ_CP013690|5|3841825-3846204|PILER-CR,CRISPRCasFinder,CRT
CTTTTAACTGCACCATATAGGTATTGAAATTTAAAAGTGATCTGTTTATCTATATCATTCACAACTTTTAACTGCACCATATAGGTATTGAAATCTAGCAAAACGACCATCTACTTTACCCTCTTTTACAGCTTTTAACTGCACCATATAGGTATTGAAATCGATATGAAAAAGGTGTATCAAATCGCCTCTCTGCTTTTAACTGCACCATATAGGTATTGAAATTCAAATCCACGATCACAATTTTTAAAGTTTGTTTTCTTTTAACTGCACCATATAGGTATTGAAATGCTTCTAACTTCAATTGTTCTTCCTTCTCTCTGTCAACTTTTAACTGCACCATATAGGTATTGAAATTTGTATCAACTTGGCCAAGCATAGCACCGACTAAACTTTTAACTGCACCATATAGGTATTGAAATCTTAATCCTATCAAACACCCTTCAAATGGTATTAACTTTTAACTGCACCATATAGGTATTGAAATGTCACTAACCAGAATCCGTCTATTGTTGGGGCTTCGCTTTTAACTGCACCATATAGGTATTGAAATAAGAAGACATGCTTTTACCTTCGATAATTAGTTCAACTTTTAACTGCACCATATAGGTATTGAAATTTGCGTCGGTTGCTTCTTTTGCTTTCTTCTCTGTTTCTTTTAACTGCACCATATAGGTATTGAAATTTTGTTACAGTATTTATTTCTGTTCTAAGTTCATCACTTTTAACTGCACCATATAGGTATTGAAATAAATTAGCTCTAAGGTCTAATCCTCTATGATTTTTACTTTTAACTGCACCATATAGGTATTGAAATCTTTTACCATCTGCAAAAGACGCACAGATGATTGAGCTTTTAACTGCACCATATAGGTATTGAAATATAACAATAACTTTACTTGTTCCTTTTGTAAAATCGTCTTTTAACTGCACCATATAGGTATTGAAATCGCTTTAATATCTCTTCTATCTCCTTTCTTGACTTCCTTTTAACTGCACCATATAGGTATTGAAATTTATCTGTAAACTTTATTTTATTCATATCCAATGTACTTTTAACTGCACCATATAGGTATTGAAATTCAAAAAATACATAGTGTGTATCTTCTTTTTTTAACTTTTAACTGCACCATATAGGTATTGAAATTCGTTTAATAAATCCCCCTCAAATATCTTAACTCCCTTTTAACTGCACCATATAGGTATTGAAATGTATAACCACAACAATTGTCTTCGTAAAATTGACCTCTTTTAACTGCACCATATAGGTATTGAAATAAATGAACTTAACGCAATGGTCACAGGTACGTCAATCTTTTAACTGCACCATATAGGTATTGAAATGTAACAAAGAATATTATATCTCCTATTTTAAATTGTGCTTTTAACTGCACCATATAGGTATTGAAATTCGAATACAATTGTCTTAATATTTTTTAAAACGTCACTTTTAACTGCACCATATAGGTATTGAAATCTATATCTCATGTCTGCATCTTTTACATCGTAGTCTTCTTTTAACTGCACCATATAGGTATTGAAATAAGTATCTGATTGGAATCTCTGTAATCTCGCAAATCTTTTAACTGCACCATATAGGTATTGAAATCTCTTAACAAATCTGCTTCCTCATCTAACATACGACTTTTAACTGCACCATATAGGTATTGAAATATTAATGTATCTAATCTACTATTAACGCCTTCTACTTTTAACTGCACCATATAGGTATTGAAATATGTACTAGCTGAAGTAAGATAATTTTCTAAAGTTACTTTTAACTGCACCATATAGGTATTGAAATACTCATCGTCTATTAAAACATATTCCTTTTTTTCTACTTTTAACTGCACCATATAGGTATTGAAATTCAAACACTACTGCTGATAAACTAATAATTACTGAACTTTTAACTGCACCATATAGGTATTGAAATGAAGTTACAAGAGTTGCAAAGTAAAGAGTTAGAAATCTTTTAACTGCACCATATAGGTATTGAAATAATCTTTCATGTTGACAAACTGATACTTTGTAATATCTTTTAACTGCACCATATAGGTATTGAAATTTTATAAGCTTTAACGTCTTGAAGCTTGAATCTTCCTGCTTTTAACTGCACCATATAGGTATTGAAATCTCAAAATAGATTAGACAAAGGATTAATTGAATAAACTTTTAACTGCACCATATAGGTATTGAAATCTTGCTAAGTTTTTAAGTCTATTTTCAAGAACTAACTTTTAACTGCACCATATAGGTATTGAAATACATCTGTTGCATATAGTCTGGGAACGAAAATAAATCTTTTAACTGCACCATATAGGTATTGAAATTTAACAGATAGTGCTACTGTTTTAAATAATGTAAGCTTTTAACTGCACCATATAGGTATTGAAATATAGATAGTTTAGAAGCTAATGCAGTAATGAGGCTACTTTTAACTGCACCATATAGGTATTGAAATTTACTAACATTCTTTAAATTCAGTTTCACAATCGTCTTTTAACTGCACCATATAGGTATTGAAATTCGTTTATTATTGTTATGCTTACATATTCACTTTTCTTTTAACTGCACCATATAGGTATTGAAATAATGATAAAAAAGAGCAGGAGAAAAAGCGTAAAATTGCTTTTAACTGCACCATATAGGTATTGAAATACATCATTAAACAACGCTCTAGCTCCAAAATCTTCTTTTAACTGCACCATATAGGTATTGAAATGAACCAAAAACATCCGATAAGTTTTCCTGCATAATACTTTTAACTGCACCATATAGGTATTGAAATTTTAGAAGGACACTCTTCTCATTGTCATTTATGACAGCTTTTAACTGCACCATATAGGTATTGAAATAAAGGTGAAACTATGCAAATAGATTTAGTATTGCCAGCTTTTAACTGCACCATATAGGTATTGAAATAAGAGGCGCAAGAATGGATTGGAACGATGAAGCAAAGCTTTTAACTGCACCATATAGGTATTGAAATCTTACTAAATTATAGACTTCATATAGTGCTAATACCACTTTTAACTGCACCATATAGGTATTGAAATATAGATGAAAAAGTAAACATAGTAAATGAATTAAGACTTTTAACTGCACCATATAGGTATTGAAATATGATGGTTGCGATGTTACACAGACAGCCATCAGCTTTTAACTGCACCATATAGGTATTGAAATTTGTTTGGCACACAGAGAAACTAATGGTTTTGATATTCTTTTAACTGCACCATATAGGTATTGAAATCTGATTATTATAACATCTTCTCTGCACGTTTCTCCTTTTAACTGCACCATATAGGTATTGAAATGTATCAGCGGACTTCAATATAAATTCTCCGTACCTGCTTTTAACTGCACCATATAGGTATTGAAATTTTGAACCCCCAGACACGTTAAAATAACTTAGATATGCTTTTAACTGCACCATATAGGTATTGAAATAGAGTTAGAGAACCAAAAGGATTAAATATAATAATCTTTTAACTGCACCATATAGGTATTGAAATAAATAAGGAATTATTAAAAGTAAACCCTGCTTATTTACTTTTAACTGCACCATATAGGTATTGAAATCGGGGTGTAAACCTTTTTAAATATTCCGCTATTTCTTCTTTTAACTGCACCATATAGGTATTGAAATTCTGTTAACTGATCTTTAATTTCAAAATATGTTTGCTTTTAACTGCACCATATAGGTATTGAAATTTACTATTCATTGTCGGTAAATTATTGCCACCTTCATTCTTTTAACTGCACCATATAGGTATTGAAATTTAGGTATTATACTTGCTTCATGTTGAAATACCTCGCTTTTAACTGCACCATATAGGTATTGAAATGGTAGTAAGAAACCTTGCCATAACAACTGATTCTCCTTTTAACTGCACCATATAGGTATTGAAATCTGTAGATGTAGCATTATCATACCCACTTACACTGACTTTTAACTGCACCATATAGGTATTGAAATATGATTCTTTTAACGATTACACCTTCTTCCTGGTCCCTTTTAACTGCACCATATAGGTATTGAAATGAAGAAAGAGAAATGGGTAAGATGGCTAAACGATCTTTTAACTGCACCATATAGGTATTGAAATACTGTCATTGAATCATCACTTATTGTAAGTTTATGCCTTTTAACTGCACCATATAGGTATTGAAATTTTAAAGGAATACCTAAACGCTGTTTTAAATCGCTTACTTTTAACTGCACCATATAGGTATTGAAATAAAATCAAGAATCTTTTTTTGAAATGACTAATAAAAACTTTTAACTGCACCATATAGGTATTGAAATCTAAAAGAAAAGATATACACTTTAATCGATCTGAAAACTTTTAACTGCACCATATAGGTATTGAAACA

>NZ_CP013690|5|1|3841825-3846203|PILER-CR
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAAAAGTGATCTGTTTATCTATATCATTCACAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTAGCAAAACGACCATCTACTTTACCCTCTTTTACAG
CTTTTAACTGCACCATATAGGTATTGAAAT	CGATATGAAAAAGGTGTATCAAATCGCCTCTCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAAATCCACGATCACAATTTTTAAAGTTTGTTTT
CTTTTAACTGCACCATATAGGTATTGAAAT	GCTTCTAACTTCAATTGTTCTTCCTTCTCTCTGTCAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGTATCAACTTGGCCAAGCATAGCACCGACTAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTAATCCTATCAAACACCCTTCAAATGGTATTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	GTCACTAACCAGAATCCGTCTATTGTTGGGGCTTCG
CTTTTAACTGCACCATATAGGTATTGAAAT	AAGAAGACATGCTTTTACCTTCGATAATTAGTTCAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGCGTCGGTTGCTTCTTTTGCTTTCTTCTCTGTTT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTGTTACAGTATTTATTTCTGTTCTAAGTTCATCA
CTTTTAACTGCACCATATAGGTATTGAAAT	AAATTAGCTCTAAGGTCTAATCCTCTATGATTTTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTTTACCATCTGCAAAAGACGCACAGATGATTGAG
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAACAATAACTTTACTTGTTCCTTTTGTAAAATCGT
CTTTTAACTGCACCATATAGGTATTGAAAT	CGCTTTAATATCTCTTCTATCTCCTTTCTTGACTTC
CTTTTAACTGCACCATATAGGTATTGAAAT	TTATCTGTAAACTTTATTTTATTCATATCCAATGTA
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAAAAAATACATAGTGTGTATCTTCTTTTTTTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TCGTTTAATAAATCCCCCTCAAATATCTTAACTCC
CTTTTAACTGCACCATATAGGTATTGAAAT	GTATAACCACAACAATTGTCTTCGTAAAATTGACCT
CTTTTAACTGCACCATATAGGTATTGAAAT	AAATGAACTTAACGCAATGGTCACAGGTACGTCAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	GTAACAAAGAATATTATATCTCCTATTTTAAATTGTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TCGAATACAATTGTCTTAATATTTTTTAAAACGTCA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTATATCTCATGTCTGCATCTTTTACATCGTAGTCTT
CTTTTAACTGCACCATATAGGTATTGAAAT	AAGTATCTGATTGGAATCTCTGTAATCTCGCAAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	CTCTTAACAAATCTGCTTCCTCATCTAACATACGA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATTAATGTATCTAATCTACTATTAACGCCTTCTA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATGTACTAGCTGAAGTAAGATAATTTTCTAAAGTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTCATCGTCTATTAAAACATATTCCTTTTTTTCTA
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAAACACTACTGCTGATAAACTAATAATTACTGAA
CTTTTAACTGCACCATATAGGTATTGAAAT	GAAGTTACAAGAGTTGCAAAGTAAAGAGTTAGAAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	AATCTTTCATGTTGACAAACTGATACTTTGTAATAT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTATAAGCTTTAACGTCTTGAAGCTTGAATCTTCCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	CTCAAAATAGATTAGACAAAGGATTAATTGAATAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTGCTAAGTTTTTAAGTCTATTTTCAAGAACTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACATCTGTTGCATATAGTCTGGGAACGAAAATAAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAACAGATAGTGCTACTGTTTTAAATAATGTAAG
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAGATAGTTTAGAAGCTAATGCAGTAATGAGGCTA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTACTAACATTCTTTAAATTCAGTTTCACAATCGT
CTTTTAACTGCACCATATAGGTATTGAAAT	TCGTTTATTATTGTTATGCTTACATATTCACTTTT
CTTTTAACTGCACCATATAGGTATTGAAAT	AATGATAAAAAAGAGCAGGAGAAAAAGCGTAAAATTG
CTTTTAACTGCACCATATAGGTATTGAAAT	ACATCATTAAACAACGCTCTAGCTCCAAAATCTT
CTTTTAACTGCACCATATAGGTATTGAAAT	GAACCAAAAACATCCGATAAGTTTTCCTGCATAATA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTAGAAGGACACTCTTCTCATTGTCATTTATGACAG
CTTTTAACTGCACCATATAGGTATTGAAAT	AAAGGTGAAACTATGCAAATAGATTTAGTATTGCCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	AAGAGGCGCAAGAATGGATTGGAACGATGAAGCAAAG
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTACTAAATTATAGACTTCATATAGTGCTAATACCA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAGATGAAAAAGTAAACATAGTAAATGAATTAAGA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATGATGGTTGCGATGTTACACAGACAGCCATCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGTTTGGCACACAGAGAAACTAATGGTTTTGATATT
CTTTTAACTGCACCATATAGGTATTGAAAT	CTGATTATTATAACATCTTCTCTGCACGTTTCTC
CTTTTAACTGCACCATATAGGTATTGAAAT	GTATCAGCGGACTTCAATATAAATTCTCCGTACCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTGAACCCCCAGACACGTTAAAATAACTTAGATATG
CTTTTAACTGCACCATATAGGTATTGAAAT	AGAGTTAGAGAACCAAAAGGATTAAATATAATAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	AAATAAGGAATTATTAAAAGTAAACCCTGCTTATTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	CGGGGTGTAAACCTTTTTAAATATTCCGCTATTTCTT
CTTTTAACTGCACCATATAGGTATTGAAAT	TCTGTTAACTGATCTTTAATTTCAAAATATGTTTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTACTATTCATTGTCGGTAAATTATTGCCACCTTCATT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAGGTATTATACTTGCTTCATGTTGAAATACCTCG
CTTTTAACTGCACCATATAGGTATTGAAAT	GGTAGTAAGAAACCTTGCCATAACAACTGATTCTC
CTTTTAACTGCACCATATAGGTATTGAAAT	CTGTAGATGTAGCATTATCATACCCACTTACACTGA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATGATTCTTTTAACGATTACACCTTCTTCCTGGTCC
CTTTTAACTGCACCATATAGGTATTGAAAT	GAAGAAAGAGAAATGGGTAAGATGGCTAAACGAT
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTGTCATTGAATCATCACTTATTGTAAGTTTATGC
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTAAAGGAATACCTAAACGCTGTTTTAAATCGCTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	AAAATCAAGAATCTTTTTTTGAAATGACTAATAAAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTAAAAGAAAAGATATACACTTTAATCGATCTGAAAA
CTTTTAACTGCACCATATAGGTATTGAAAC

>NZ_CP013690|5|5|3841825-3846204|CRISPRCasFinder
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAAAAGTGATCTGTTTATCTATATCATTCACAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTAGCAAAACGACCATCTACTTTACCCTCTTTTACAG
CTTTTAACTGCACCATATAGGTATTGAAAT	CGATATGAAAAAGGTGTATCAAATCGCCTCTCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAAATCCACGATCACAATTTTTAAAGTTTGTTTT
CTTTTAACTGCACCATATAGGTATTGAAAT	GCTTCTAACTTCAATTGTTCTTCCTTCTCTCTGTCAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGTATCAACTTGGCCAAGCATAGCACCGACTAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTAATCCTATCAAACACCCTTCAAATGGTATTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	GTCACTAACCAGAATCCGTCTATTGTTGGGGCTTCG
CTTTTAACTGCACCATATAGGTATTGAAAT	AAGAAGACATGCTTTTACCTTCGATAATTAGTTCAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGCGTCGGTTGCTTCTTTTGCTTTCTTCTCTGTTT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTGTTACAGTATTTATTTCTGTTCTAAGTTCATCA
CTTTTAACTGCACCATATAGGTATTGAAAT	AAATTAGCTCTAAGGTCTAATCCTCTATGATTTTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTTTACCATCTGCAAAAGACGCACAGATGATTGAG
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAACAATAACTTTACTTGTTCCTTTTGTAAAATCGT
CTTTTAACTGCACCATATAGGTATTGAAAT	CGCTTTAATATCTCTTCTATCTCCTTTCTTGACTTC
CTTTTAACTGCACCATATAGGTATTGAAAT	TTATCTGTAAACTTTATTTTATTCATATCCAATGTA
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAAAAAATACATAGTGTGTATCTTCTTTTTTTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TCGTTTAATAAATCCCCCTCAAATATCTTAACTCC
CTTTTAACTGCACCATATAGGTATTGAAAT	GTATAACCACAACAATTGTCTTCGTAAAATTGACCT
CTTTTAACTGCACCATATAGGTATTGAAAT	AAATGAACTTAACGCAATGGTCACAGGTACGTCAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	GTAACAAAGAATATTATATCTCCTATTTTAAATTGTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TCGAATACAATTGTCTTAATATTTTTTAAAACGTCA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTATATCTCATGTCTGCATCTTTTACATCGTAGTCTT
CTTTTAACTGCACCATATAGGTATTGAAAT	AAGTATCTGATTGGAATCTCTGTAATCTCGCAAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	CTCTTAACAAATCTGCTTCCTCATCTAACATACGA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATTAATGTATCTAATCTACTATTAACGCCTTCTA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATGTACTAGCTGAAGTAAGATAATTTTCTAAAGTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTCATCGTCTATTAAAACATATTCCTTTTTTTCTA
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAAACACTACTGCTGATAAACTAATAATTACTGAA
CTTTTAACTGCACCATATAGGTATTGAAAT	GAAGTTACAAGAGTTGCAAAGTAAAGAGTTAGAAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	AATCTTTCATGTTGACAAACTGATACTTTGTAATAT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTATAAGCTTTAACGTCTTGAAGCTTGAATCTTCCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	CTCAAAATAGATTAGACAAAGGATTAATTGAATAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTGCTAAGTTTTTAAGTCTATTTTCAAGAACTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACATCTGTTGCATATAGTCTGGGAACGAAAATAAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAACAGATAGTGCTACTGTTTTAAATAATGTAAG
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAGATAGTTTAGAAGCTAATGCAGTAATGAGGCTA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTACTAACATTCTTTAAATTCAGTTTCACAATCGT
CTTTTAACTGCACCATATAGGTATTGAAAT	TCGTTTATTATTGTTATGCTTACATATTCACTTTT
CTTTTAACTGCACCATATAGGTATTGAAAT	AATGATAAAAAAGAGCAGGAGAAAAAGCGTAAAATTG
CTTTTAACTGCACCATATAGGTATTGAAAT	ACATCATTAAACAACGCTCTAGCTCCAAAATCTT
CTTTTAACTGCACCATATAGGTATTGAAAT	GAACCAAAAACATCCGATAAGTTTTCCTGCATAATA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTAGAAGGACACTCTTCTCATTGTCATTTATGACAG
CTTTTAACTGCACCATATAGGTATTGAAAT	AAAGGTGAAACTATGCAAATAGATTTAGTATTGCCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	AAGAGGCGCAAGAATGGATTGGAACGATGAAGCAAAG
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTACTAAATTATAGACTTCATATAGTGCTAATACCA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAGATGAAAAAGTAAACATAGTAAATGAATTAAGA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATGATGGTTGCGATGTTACACAGACAGCCATCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGTTTGGCACACAGAGAAACTAATGGTTTTGATATT
CTTTTAACTGCACCATATAGGTATTGAAAT	CTGATTATTATAACATCTTCTCTGCACGTTTCTC
CTTTTAACTGCACCATATAGGTATTGAAAT	GTATCAGCGGACTTCAATATAAATTCTCCGTACCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTGAACCCCCAGACACGTTAAAATAACTTAGATATG
CTTTTAACTGCACCATATAGGTATTGAAAT	AGAGTTAGAGAACCAAAAGGATTAAATATAATAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	AAATAAGGAATTATTAAAAGTAAACCCTGCTTATTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	CGGGGTGTAAACCTTTTTAAATATTCCGCTATTTCTT
CTTTTAACTGCACCATATAGGTATTGAAAT	TCTGTTAACTGATCTTTAATTTCAAAATATGTTTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTACTATTCATTGTCGGTAAATTATTGCCACCTTCATT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAGGTATTATACTTGCTTCATGTTGAAATACCTCG
CTTTTAACTGCACCATATAGGTATTGAAAT	GGTAGTAAGAAACCTTGCCATAACAACTGATTCTC
CTTTTAACTGCACCATATAGGTATTGAAAT	CTGTAGATGTAGCATTATCATACCCACTTACACTGA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATGATTCTTTTAACGATTACACCTTCTTCCTGGTCC
CTTTTAACTGCACCATATAGGTATTGAAAT	GAAGAAAGAGAAATGGGTAAGATGGCTAAACGAT
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTGTCATTGAATCATCACTTATTGTAAGTTTATGC
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTAAAGGAATACCTAAACGCTGTTTTAAATCGCTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	AAAATCAAGAATCTTTTTTTGAAATGACTAATAAAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTAAAAGAAAAGATATACACTTTAATCGATCTGAAAA
CTTTTAACTGCACCATATAGGTATTGAAACA

>NZ_CP013690|5|1|3841825-3846203|CRT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAAAAGTGATCTGTTTATCTATATCATTCACAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTAGCAAAACGACCATCTACTTTACCCTCTTTTACAG
CTTTTAACTGCACCATATAGGTATTGAAAT	CGATATGAAAAAGGTGTATCAAATCGCCTCTCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAAATCCACGATCACAATTTTTAAAGTTTGTTTT
CTTTTAACTGCACCATATAGGTATTGAAAT	GCTTCTAACTTCAATTGTTCTTCCTTCTCTCTGTCAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGTATCAACTTGGCCAAGCATAGCACCGACTAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTAATCCTATCAAACACCCTTCAAATGGTATTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	GTCACTAACCAGAATCCGTCTATTGTTGGGGCTTCG
CTTTTAACTGCACCATATAGGTATTGAAAT	AAGAAGACATGCTTTTACCTTCGATAATTAGTTCAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGCGTCGGTTGCTTCTTTTGCTTTCTTCTCTGTTT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTGTTACAGTATTTATTTCTGTTCTAAGTTCATCA
CTTTTAACTGCACCATATAGGTATTGAAAT	AAATTAGCTCTAAGGTCTAATCCTCTATGATTTTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTTTACCATCTGCAAAAGACGCACAGATGATTGAG
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAACAATAACTTTACTTGTTCCTTTTGTAAAATCGT
CTTTTAACTGCACCATATAGGTATTGAAAT	CGCTTTAATATCTCTTCTATCTCCTTTCTTGACTTC
CTTTTAACTGCACCATATAGGTATTGAAAT	TTATCTGTAAACTTTATTTTATTCATATCCAATGTA
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAAAAAATACATAGTGTGTATCTTCTTTTTTTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TCGTTTAATAAATCCCCCTCAAATATCTTAACTCC
CTTTTAACTGCACCATATAGGTATTGAAAT	GTATAACCACAACAATTGTCTTCGTAAAATTGACCT
CTTTTAACTGCACCATATAGGTATTGAAAT	AAATGAACTTAACGCAATGGTCACAGGTACGTCAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	GTAACAAAGAATATTATATCTCCTATTTTAAATTGTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TCGAATACAATTGTCTTAATATTTTTTAAAACGTCA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTATATCTCATGTCTGCATCTTTTACATCGTAGTCTT
CTTTTAACTGCACCATATAGGTATTGAAAT	AAGTATCTGATTGGAATCTCTGTAATCTCGCAAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	CTCTTAACAAATCTGCTTCCTCATCTAACATACGA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATTAATGTATCTAATCTACTATTAACGCCTTCTA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATGTACTAGCTGAAGTAAGATAATTTTCTAAAGTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTCATCGTCTATTAAAACATATTCCTTTTTTTCTA
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAAACACTACTGCTGATAAACTAATAATTACTGAA
CTTTTAACTGCACCATATAGGTATTGAAAT	GAAGTTACAAGAGTTGCAAAGTAAAGAGTTAGAAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	AATCTTTCATGTTGACAAACTGATACTTTGTAATAT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTATAAGCTTTAACGTCTTGAAGCTTGAATCTTCCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	CTCAAAATAGATTAGACAAAGGATTAATTGAATAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTGCTAAGTTTTTAAGTCTATTTTCAAGAACTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACATCTGTTGCATATAGTCTGGGAACGAAAATAAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAACAGATAGTGCTACTGTTTTAAATAATGTAAG
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAGATAGTTTAGAAGCTAATGCAGTAATGAGGCTA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTACTAACATTCTTTAAATTCAGTTTCACAATCGT
CTTTTAACTGCACCATATAGGTATTGAAAT	TCGTTTATTATTGTTATGCTTACATATTCACTTTT
CTTTTAACTGCACCATATAGGTATTGAAAT	AATGATAAAAAAGAGCAGGAGAAAAAGCGTAAAATTG
CTTTTAACTGCACCATATAGGTATTGAAAT	ACATCATTAAACAACGCTCTAGCTCCAAAATCTT
CTTTTAACTGCACCATATAGGTATTGAAAT	GAACCAAAAACATCCGATAAGTTTTCCTGCATAATA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTAGAAGGACACTCTTCTCATTGTCATTTATGACAG
CTTTTAACTGCACCATATAGGTATTGAAAT	AAAGGTGAAACTATGCAAATAGATTTAGTATTGCCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	AAGAGGCGCAAGAATGGATTGGAACGATGAAGCAAAG
CTTTTAACTGCACCATATAGGTATTGAAAT	CTTACTAAATTATAGACTTCATATAGTGCTAATACCA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAGATGAAAAAGTAAACATAGTAAATGAATTAAGA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATGATGGTTGCGATGTTACACAGACAGCCATCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGTTTGGCACACAGAGAAACTAATGGTTTTGATATT
CTTTTAACTGCACCATATAGGTATTGAAAT	CTGATTATTATAACATCTTCTCTGCACGTTTCTC
CTTTTAACTGCACCATATAGGTATTGAAAT	GTATCAGCGGACTTCAATATAAATTCTCCGTACCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTGAACCCCCAGACACGTTAAAATAACTTAGATATG
CTTTTAACTGCACCATATAGGTATTGAAAT	AGAGTTAGAGAACCAAAAGGATTAAATATAATAAT
CTTTTAACTGCACCATATAGGTATTGAAAT	AAATAAGGAATTATTAAAAGTAAACCCTGCTTATTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	CGGGGTGTAAACCTTTTTAAATATTCCGCTATTTCTT
CTTTTAACTGCACCATATAGGTATTGAAAT	TCTGTTAACTGATCTTTAATTTCAAAATATGTTTG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTACTATTCATTGTCGGTAAATTATTGCCACCTTCATT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAGGTATTATACTTGCTTCATGTTGAAATACCTCG
CTTTTAACTGCACCATATAGGTATTGAAAT	GGTAGTAAGAAACCTTGCCATAACAACTGATTCTC
CTTTTAACTGCACCATATAGGTATTGAAAT	CTGTAGATGTAGCATTATCATACCCACTTACACTGA
CTTTTAACTGCACCATATAGGTATTGAAAT	ATGATTCTTTTAACGATTACACCTTCTTCCTGGTCC
CTTTTAACTGCACCATATAGGTATTGAAAT	GAAGAAAGAGAAATGGGTAAGATGGCTAAACGAT
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTGTCATTGAATCATCACTTATTGTAAGTTTATGC
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTAAAGGAATACCTAAACGCTGTTTTAAATCGCTTA
CTTTTAACTGCACCATATAGGTATTGAAAT	AAAATCAAGAATCTTTTTTTGAAATGACTAATAAAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	CTAAAAGAAAAGATATACACTTTAATCGATCTGAAAA
CTTTTAACTGCACCATATAGGTATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013690.1\|WP_006258364.1\|3840348_3841356_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP013690.1\|WP_006258363.1\|3841355_3841619_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP013690.1\|WP_006258345.1\|3854116_3855820_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|234861
NZ_CP013690.1\|WP_006258370.1\|3832584_3833379_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|224499
NZ_CP013690.1\|WP_006258349.1\|3851436_3852072_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP013690.1\|WP_006258351.1\|3848887_3849778_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP013690.1\|WP_025124246.1\|3852781_3853411_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006258368.1\|3835334_3836231_+\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP013690.1\|WP_006258369.1\|3833381_3835322_+\|hypothetical-protein	cas8b1	mkCas0106_cas8b1_CAS-I-B	unknown
NZ_CP013690.1\|WP_006258342.1\|3858698_3859745_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|273093
NZ_CP013690.1\|WP_006258365.1\|3839826_3840336_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP013690.1\|WP_016649053.1\|3852130_3852619_+\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_CP013690.1\|WP_006258371.1\|3830558_3832118_+\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|225307
NZ_CP013690.1\|WP_006258344.1\|3856144_3857839_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|181601
NZ_CP013690.1\|WP_006258343.1\|3857851_3858364_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NZ_CP013690.1\|WP_006258350.1\|3849866_3851312_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP013690.1\|WP_006258819.1\|3846279_3847449_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|372999
NZ_CP013690.1\|WP_058699797.1\|3836276_3837047_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_CP013690.1\|WP_058699796.1\|3828438_3830202_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP013690.1\|WP_006258366.1\|3837030_3839817_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124

Protein	Function_ID	Function_description	E-value
NZ_CP013690.1\|WP_006258364.1\|3840348_3841356_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	7.49967e-168
NZ_CP013690.1\|WP_006258363.1\|3841355_3841619_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.22247e-30
NZ_CP013690.1\|WP_006258345.1\|3854116_3855820_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP013690.1\|WP_006258370.1\|3832584_3833379_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|224499	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	7.62485e-16
NZ_CP013690.1\|WP_006258349.1\|3851436_3852072_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	1.86215e-46
NZ_CP013690.1\|WP_058699797.1\|3836276_3837047_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	5.38734e-26
NZ_CP013690.1\|WP_006258368.1\|3835334_3836231_+\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.59715e-43
NZ_CP013690.1\|WP_006258342.1\|3858698_3859745_+\|ketol-acid-reductoisomerase	gnl\|CDD\|273093	TIGR00465, Ketol-acid_reductoisomerase, ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway [Amino acid biosynthesis, Pyruvate family].	2.16475e-102
NZ_CP013690.1\|WP_006258365.1\|3839826_3840336_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.53524e-51
NZ_CP013690.1\|WP_016649053.1\|3852130_3852619_+\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	7.43543e-33
NZ_CP013690.1\|WP_006258371.1\|3830558_3832118_+\|FAD-binding-protein	gnl\|CDD\|225307	COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only].	7.29427e-109
NZ_CP013690.1\|WP_006258344.1\|3856144_3857839_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|181601	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed.	0
NZ_CP013690.1\|WP_006258343.1\|3857851_3858364_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	7.07402e-28
NZ_CP013690.1\|WP_006258350.1\|3849866_3851312_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.13817e-115
NZ_CP013690.1\|WP_006258819.1\|3846279_3847449_-\|IS4-family-transposase	gnl\|CDD\|372999	pfam14294, DUF4372, Domain of unknown function (DUF4372). This domain family is found in bacteria, and is approximately 80 amino acids in length. The family is found in association with pfam01609. There is a single completely conserved residue G that may be functionally important.	9.42499e-24
NZ_CP013690.1\|WP_006258351.1\|3848887_3849778_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	2.28148e-12
NZ_CP013690.1\|WP_058699796.1\|3828438_3830202_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.29942e-131
NZ_CP013690.1\|WP_006258366.1\|3837030_3839817_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.10934e-37

>NZ_CP013690.1|WP_006258363.1|3841355_3841619_+|CRISPR-associated-endonuclease-Cas2
MYVILVYDIGERRVGKMLKLCRRYLNWIQNSVFEGEISEVKLKALLAEAKEIMNKEEDSVIIFKSREERWLEKQVVGKEKNELDNFL
>NZ_CP013690.1|WP_006258364.1|3840348_3841356_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTYYLFNPGRLSRKDNTLKFVPTDANGSEGTPKYIPIEGVADLFCFGSLDANSALYTFLGKQGIAVHFFDYYEHYSGSFMPKEYLLAGKMQIEQTKNYIDKKKRLVLARKFVSGASFNMVKNLRYYINRDRDLQDIQDAIERYSSLIEGSNEVDELMGVEGNIRQMYYSAFNDIITSDFTMDTRSKRPPQNEINALISFGNMMCYSLCLSQIYHTQLNPTISFLHEPGYRRYSLALDLAEIFKPLLVDRLIFRLLNKKEIQANDFDHKLNSCTLKESGRKIFVRAWEEKISETFKHPVLKRNVSYKHLIKLECYKLSKHILGIEEYKPFKARW
>NZ_CP013690.1|WP_006258365.1|3839826_3840336_+|CRISPR-associated-protein-Cas4
MLINATHINLYHVCKRELWLHYHGIRMEYNSDLVAEGKLLGELSYPERSEKYTELQLGNVKIDYYDARNKVVHEVKKSDKVEQAHKAQVKYYLYRLLQAGVEGATGIIEYPSLRQREYVTLDLGDIDIIKKWEQEIQEICEGDKCPKTIHAKICRSCSYCDFCYIEEED
>NZ_CP013690.1|WP_006258366.1|3837030_3839817_+|CRISPR-associated-helicase/endonuclease-Cas3
MYNSYKTIQQILMEVPSLRSYLRDEDTYYAHRDRNGLKAPETLVEHIELVEKYFLQLIRDHHLDEVIDTLISDYLKVVGVDNNSVGEEIKRQFVCVIRFHDHGKVNENFQADSTKMNNANFYGMEIKDSVLSTTHSSLGAFIFLVDQFESILKMVKPKEIYCLVFTAYVFSYSIFKHHSSSINDNVEDTLNMDTLFNNEREKVLEFMSKYLPLFGYKIRKELIAYVGNKNLLRNIFKDFNKSDAMYSLLKLNFSLLTASDYLATNEYCNSYKNVPVKSILDNGVFSFDRINEIYQNVTTKEKLVNNKEKVNFNSKTYSDLEGYILSNPRTLSGDNLNVLRKEMGIEVINNIRKNIDKNLFYIEAPTGGGKTNLSALAAIELLKAHKGKINKVFYVFPFTTLITQTKASLKETLGLTEDEIIELHSKASFTEKSEHDDTYGKDKLNYITNLFVHYPMCLLSHIGFFDIIKSNRKENNYLFHRLANSVVVIDELQSYNPSQWDKVIYFINHFAKAFNIKFILMSATLPKLDKLDFLKEKVNDFVYLVPDAKEKYFRNPNFCERIAFNFEYFEKRVSLSELADRLVEESKQYATFDYGKAKPKDSVYTIIEFIYKQSATDFYDLLKECDFFDEVFVLSGTILEHRRQYIINFLKDNDNRHKKILLITTQVVEAGVDIDMDLGFKDRSLIDSDEQLAGRINRNVNKKNCKLFLFDYNKESAVYGSDLRYKLTKEKITPKLYKEILEKKDFDQLYDLVINNRNQWSAKPMVENVKDYITHLKELRFESVANDFKLIDSNNISCFIPLEIPINIGDTSFFTQKELDFLVLYNIKPTKENKICGVKVFDLYTDIICNRVDFISQKIREKQLQSIMSKYVFSVFATKNIENQLAHYNNPDKSKFGYEYIERWNVFYTEAGGMDTMSLNGIEESQFL
>NZ_CP013690.1|WP_058699797.1|3836276_3837047_+|type-I-B-CRISPR-associated-protein-Cas5
MKIVSIDLCSDFGFFRKPDTNNTINLSYNMIHKPAVLGLLGAILGLGGYKKKDVLPDYYLKLKDLKIAIEPLMHDKGNFAKTAIKYTNTVGYANKGNNFLTEELTLVKPAYRIYLLLDESNELESKLLEYLKNANAEFVPYFGKNEFTAWWTKESFKEYSFEIPIEDLEHEVAIKSLFLKSMNVKDNKETPYPVFGSMEMVENTFVYFERLPDGFNEELMQYNLEDFAYTNFLIKNSKILDNLYCLKELDAYVQFI
>NZ_CP013690.1|WP_006258368.1|3835334_3836231_+|type-I-CRISPR-associated-protein-Cas7
MSTSFKNRVYGAVVIKSINSNYNADFSGQPRKLPNGVVYATDKALKYSIRNYWKNALGESVFYFKSLNENLAPRDLKETYEVKYKDIKNDKVDVLANLLQSIDVRLFGGTFAVKSVNLSLHGTCQITHGVNKFSENVIYTEQILSPFRNSNKEDADNSTLGSQSRLEEGHYVHHFSVNPKNIEEDAERVKSAGVLVEDIAKLKEGMCKGASYYDSAAKSGTENELLLWVELKEGSKVVLPSFVNLIDINDSREIDLQKVQALLKEEHIAKDVLKIELFYNKTLTKVINEPIGATVLAI
>NZ_CP013690.1|WP_006258369.1|3833381_3835322_+|hypothetical-protein
MIKEIVNFMRLLPDDFKTMGSQPKEGLHILLHQKVDRDQICSIDLVNFEYEMYSKKDEEVSPFLEECKIRHQNAWCIDTNKCFDLPIKAIHSCSPFMVAFKREHLKGGTKYLANAGGKKKQIYERFVDYFEKAFALFDNDNEKHKYEVYRNFFTQEQFVTIIERIERNFDIERSNLLTKKEEINELLKKTIDKVEKENIKLELKKLDQSLLKLRDLSDGEYLIFYLDLPVDQYKSVHKKYLDDKLFNTDKYNTPPDESGIIYGTSNFMNGFNSNMPFLMHQSASFDITGRITNEEAKLLHEFKGVLPNKVLPNPLPLFVYKDELNGDMVRILRENGFKLGYQEIIQKMVNEKNSDLSNYYLLYWQNTKDGLVFKDYDFISNFEYKFGTIDSNKLCVENLFEAYDDKKLKGNVVITDVFHLENVVFKPLIGNKYHKVDCFSDLNTDGYEILPNTFVSYSKYRKVVYDYVYKSQRQVIDYNVFYEMVFNSIKDSIKNGYINSVKEKLNIWYSVQHHFNQQNKEYMGSKLKEYQSFVNELISEEGLQMKANDEHFAFTAGMVISYILNKSKSADNSYLLLEPYLQQAKCSEFKKAIANDFARYKHENFSRSFERAAAFVLSYETEVNLKKLMPEILSGVFAKNQLYSSK
>NZ_CP013690.1|WP_006258370.1|3832584_3833379_+|CRISPR-associated-endoribonuclease-Cas6
MRFRIKLEAIDKERIIPANYQYPLSAAIYKIISKGDNDYATFLHQEGYGKGLKLFCFSDIKCPFVIEGDRLLLQQNELEVQVAFHLPEAMQHFVQGLFASEKINISDKKSRQDFRVKTIERINNKLSVYKENEIVSICVRPISPLVIGLKREDWSYEYLNPEHSRYQEMFVYSWREKIKAAYGEEEADNAFLAMEVKFYDKPYRSRLVTIKQGTPQQTKIKGYVNFKIEVKGERRFIDLLLNAGGGVYNAQGLGFLEIVEEKKI
>NZ_CP013690.1|WP_006258371.1|3830558_3832118_+|FAD-binding-protein
MPQELQLQVLPEVAGTADLLTQYVANHVKCSPKDIKHITILKRSIDARQRTVKINLKVAVFFADEDVVHRHIDFPEYKNVKDAPRVIVVGAGPAGYFAALQLIELGVKPIVVERGKDVRGRRRDLKAINIDHIVDPDSNYCFGEGGAGTYSDGKLYTRSKKRGDVNRILELLVAFGASQDILVEAHPHIGTNKLPKIMQDMRAKIEEFGGEVLFEKRVVDFVIKGNEIEGVKLHNGDLIEAKKIILATGHSARDIYELLNRKKVLIEAKPFALGVRAEHPQTLIDKIQYSCDYRGEFLPPAPYSIVKQVNGRGMYSFCMCPGGVIAPCATAPGEVVTNGWSPSKRDQATANSGIVVELRLEDFKPFEKFGALAGMEFQKSIEQQAYRVAGETQRVPAQRMVDFSQSKVSESIPKTSYLPGTTSIELGQVFPGFLTQIMRQGFQEFGKSMKGYFTNEAILHAPESRTSSPVRIPREDYTLEHPQIKGLYPCGEGAGYAGGIVSAAIDGEKCAIMCVESMQ
>NZ_CP013690.1|WP_058699796.1|3828438_3830202_+|ABC-transporter-ATP-binding-protein
MSKVQTNKSSSFIGILSNLIKAAGPMDGRLRMSLILILLSSVFQGAAYTCFYPIFMNIGKGKPEQVWFYIWIALGFVVISAICRWIGQDYDYGGFSSQAQYDLRKRQGEKLREMPLEFLSNKRSGKWSAVISNNVDEVISYTITVSSLMMYGVITPISVGLMTFFFDWKIAIVILILFPVIIPLYRWRKPAYDRGMYYLNEVHSELNAESIEFIQGLPVLKASNGIERIVVRLNKSIDKVREVQIFGHGKGSTPNLIITSALEVGMLVSLGLGILFVLKADSNMMVMTALMIIVIRFSELISSFVPMTMIFSLMEAGYKQITAMLTAPVLEVKTPQAKPTSYGIEFKEVDFYYEDAQEKTLSNINLSIAPKSIVALVGPSGSGKTTLARMIMRYADCQKGSISIGGVDIANLSQNDLLSMISVVFQEVYLFDDTIGNNIRMAKPTATQEEIIDAAKRAQCHDFISQLPKGYDTPIGDMGNTLSGGERQRISIARALLKNSPIVILDEPTSSLDSLSELAVQRAIDELVKEKIVIIIAHRLSTVRGADKICVLEKGQIVEEGTHEALMIKQGKYCDLWEAEKQIEALF
>NZ_CP013690.1|WP_006258819.1|3846279_3847449_-|IS4-family-transposase
MVNITLFSQIIAKLDRSKFKKIVKEKQTDKHNKGFNSWSHLVSMLFCHFARSKSVRDISNGLRSATGNLNHLGIDRAPSKSSVSYQNINRTHKLFKEYYFVLLQSLGQHPKFKQVKFRIKSKILLLDSTTISLCLSIFDWAKYKTNKGAVKMHTLLDFDGNLPAYINITNGKTADNKGAYDIPLLKGSVIVADRFYNDFSLLNVWDSKQVFFVIRHKDNLKFETIKELELPENRHQNILKDEIITLTNSNSKQLYPNKLRRVAVWDQENEQVIELITNQFTWTANTISELYKSRWMVEIFFRDLKQLLHIKSFIGTSENAVMIQIWTALITILILKALRAQSQFGWHLSNLVAFIRLNLFVKIELQKWLDNPINEVEKPPPKLIQGVLF
>NZ_CP013690.1|WP_006258351.1|3848887_3849778_-|DMT-family-transporter
MEQSGILNATTKSSNGWLNGFIGVLLFAGSMPATKMAVKDLDPIFATAARAVIAALLALACVIALREKRPTKEQMWPLIKVAIGGVIGFPLLTAMALEYITSAHSLVFMGMLPLSTAIFAVFIGKEKPKPIFWLFSLIGSALVIGFAFSQGVSSNPIGDILMILAIILCGQSYAEGAKLSKTLGGYQVISWACIISLPLTVPIMIYTVPTDLVLVSGESWFGLFYISVVSMFLAYIFWYKGLAQGGIATVGQIQLLQPLLGMILAATVLNEKVSPTMLYVTFGVILCVAASKKFAK
>NZ_CP013690.1|WP_006258350.1|3849866_3851312_+|PLP-dependent-aminotransferase-family-protein
MNMSKTFLYSEIAENIASQIRSGNIREGEKLPSLRGLCAEYEISMNTARRVFLELESLSLIYSKPQSGYFVSKLSYKNLPLPEESNPILLANHCEPNDILQKVYANIGREDLLLLSYTVAYGDMLPIAKLKKEIVQATRDLPTGGVQYERLEGNANLRRMIALRSSGWGANLQEEDLITTNGGMNAVALCLTALSKPGDTVAIESPCYPGILQLALGLGLKVFELPTNPNTGIKVEALREVVSEIDICILISNYNTPVGSCMPDENKKEVVELLAQHDIPLIEDDVYGDLCFEGHRPTCCKTFDKTGNVLWCSSISKTLAPGFRVGWVAPGKYKDKVQNIKLIQSISSSSLEQEAVANFLRSGKYDKHLRKLRRKLYQNYQNYARVIQQSFPKNIKISQPQGGLSLWIEFSEEIDTIELYDLAMKKGISIAPGRMFTLQNQYNNSMRLCFGLPWDVQLEGKIKQIGLLARQLQNLKTVNTE
>NZ_CP013690.1|WP_006258349.1|3851436_3852072_+|LysE-family-translocator
MIPLHDLMLFAIAAVVLAITPGPNMLYLITRTLSQGKRAGFISLMGVICGFLFHIILVSFGLTAILFTIPYAYAILKWTGALYLVFLAFQALKPNAKNIFDVEQSVKVDSPSKLFSIGFLTNVLNPKVAVFYLSLFPQFIKPAYGSVLVQSLTLGTTQLLVSFINNFLIVLFAAKMASFFQRQPLWVKVQKWFMGSVLLFLAFKMAISKGK
>NZ_CP013690.1|WP_016649053.1|3852130_3852619_+|PaaI-family-thioesterase
MSINRTRTFSWEDPNKTLEEAKKLNGYEFLMQVLEGNLPMAPIQETISSRVVSVEKGQVIFELKGEEFHYNPIGSVHGGIISTVLDSAIGCSLLSTLEVGESFTSLDLKVNFLRRITADTPPLTTKTKIIHKGRTTAYLECELLDAEGKLYAHAVSNCMIFR
>NZ_CP013690.1|WP_025124246.1|3852781_3853411_+|hypothetical-protein
MKKRYFILIMIGVIITLGVVFSETIVLRLVGVQELEVFSQKDYEESLVKLKEKYPERAQFLISTQEQFISYSSLVEKDKQYILTKPIQLLYFKEDSLVSIHSSCNVPINYWTWKLDWNIDNRFEQFPPLSSTSTLDIKLKQIQDVYGFRRENTSENTLIVFWSRMMEKQVYGALETVIYNKRLSNKKEKLNTIFINVDHAFLGKIVLDE
>NZ_CP013690.1|WP_006258345.1|3854116_3855820_+|dihydroxy-acid-dehydratase
MNVLNKYSRVITQDQTQPAAQAMLYGIGLSEEDLDKAQVGVVSMGYEGNTCNMHLNDLAKYVKQGVKQSGLVGLIFNTIGVSDGISNGTEGMKYSLVSRDIIADSIETVVNAQWYDSVIAIPGCDKNMPGAIIAMGRLNRPAIMVYGGTIHSGKYKDESLNIVSAFEALGKKFSNSISEEDYKGVIKNACPGAGACGGMYTANTMASAIEALGMSLPHSSSYPALSSEKKQECLEVGQALRNLLEKDIKPSDIMTREAFENAMTMVITLGGSTNAVLHLIAMAHAVDIEITLKDFQEISDRVPVLADLKPSGKYLMEDLHKIGGVPAIMKHLLDQGLLHGDCLTVTGKTVRENLSLAKDLTKDQDIIVDITTPIKESGHLQFLYGNLAEKGSVAKISGKEGTFFKGKARVFNDEYAVIASVSAQEVQPGEVIVIRYCGPKGGPGMPEMLKPTSAIMGAGLGKSVALITDGRFSGGTHGFVVGHITPEAYDGGTIALVENGDIISIDVENRKLELLVDQKVLEARREKWQKPALKFKKGVLYKYSNCVADASEGCITDRIKNVYPSGN
>NZ_CP013690.1|WP_006258344.1|3856144_3857839_+|biosynthetic-type-acetolactate-synthase-large-subunit
MQQEKLTGAQAVISSLLCEGVETIFGYPGGAIMPIYDALYDKMDELEHILVRHEQGAIHAAQGFARASGKVGVVFATSGPGATNLITGLADAYIDSTPVVCIIGQVTSQLLGTDAFQETDVIGISMPITKWNYQVTKASEIAPTIAKAFYLAKAGRPGPVVIDITKDAQFGMTAFEYKPCSEVRSYAPEPSVDLERFHQAADLINKAKKPYLLVGQGVLLSHAEQELKAFVEKTDIPTASTLLGLGALPSNHSHFCGMLGMHGDYAANVKTNECDVLIAIGMRFDDRVTGDVSRYAKQAKVIHIDIDAAELNKIIKADIGIQSDAKKALNTLIELVEQRTHKDWLSEFKQGKAYEVEQLKVHKQQVNADKIMMEDAVKLLTELTKGEVVIVTDVGQHQMITARHYQYNSPKTNITSGGLGTMGFALPAAVGAKLGNPQQTVVAIAGDAGFQMNIQELGTIMQSNIGVKMIILNNSFLGMVRQWQQMFFEKRYSFTEMNNPNFVGIAQSYNIKGNKVEHATDLRHALEEMLVHPGAYLLEIVVEKEENVYPMIPTGASVSDVLLN
>NZ_CP013690.1|WP_006258343.1|3857851_3858364_+|acetolactate-synthase-small-subunit
MKEEFTLSVFTENSIGMLTRITNVFTRRHINLDSLTVSESEIKQVFKYTVVFKSTQEQVDKLIGQLERLVEVFKVFAHKNSDIIYQELALYKVKTNLLSNTQVEQIIRANQARILSVDKDFIAIEKTGYIEEIENLFTQLSSYGVLEFTRSGRVAITKPMNYEELYLIKN
>NZ_CP013690.1|WP_006258342.1|3858698_3859745_+|ketol-acid-reductoisomerase
MGQINFGGTLENVVTREEFTLDKAREVLKNEVLAVIGYGVQGPGQAQNLRDNKINVIVGQRKNSTSWDKAVADGWVEGETLFDIEEACQRGTIIMNLLSDAGQIHTWETVKGNLSAGKALYFSHGFGVAFHQKTNIIPPAGIDVFLVAPKGSGTSLRTLFLEGCGLNSSYAIFQDATGRAQERALAVGIAIGSGYLFETTFEREAYSDLTGERGVLMGAIAGIFEAQYNVLRAKGHTPSEAFNETVEELTQSLMPLVADRGMDWMYANCSTTAQRGALDWKDKFRDATTPVFKELYESVASGREAEIVIKANSEKDYRAKLEEELKELRESELWQTGAEVRKLRPSQS

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Crispr_ID: NZ_CP013690_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013690_6

3847529-3848812

TypeI-B

Consensus_repeat	Method
CTTTTAACTGCACCATATAGGTATTGAAAT	CRT
CTTTTAACTGCACCATATAGGTATTGAAAT	CRISPRCasFinder
GCTTTTAACTGCACCATATAGGTATTGAAAT	PILER-CR
CACCATATAGGTATTGAAA	PILER-CR

19 spacers

cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NZ_CP013690_6

>merge|NZ_CP013690|6|3847529-3848812|CRT,CRISPRCasFinder,PILER-CR,PILER-CR
AAATGTTTAGGACGCTATTGGTATTGAAATATAAAAGAGGAGAGAGGATATAATGAAGATTTGCTAACTTTTAACTGCACCATATAGGTATTGAAATTTTATCGCATGATCCTTTATGTTATACTGTTTATACTTTTAACTGCACCATATAGGTATTGAAATACTATACAGTTGACTTTGATGGTAAGATTTACCCAGCTTTTAACTGCACCATATAGGTATTGAAATTTTATCGCATGATCCTTTATGTTATACTGTTTATACTTTTAACTGCACCATATAGGTATTGAAATACTATACAGTTGACTTTGATGGTAAGATTTACCCAGCTTTTAACTGCACCATATAGGTATTGAAATTCAGTCAATGGATAACAATATACTTATAACAGTTGCTTTTAACTGCACCATATAGGTATTGAAATATAGGTACACCATGTGAACCTTTTCTTAGCATCCCCTCTTTTAACTGCACCATATAGGTATTGAAATTTATAATATTTATAAAGGATATATAAATTATAACGGCTTTTAACTGCACCATATAGGTATTGAAATTTATAATATTTATAAAGGATATATAAATTATAACGGCTTTTAACTGCACCATATAGGTATTGAAATTTAGGTTTCATATTAGGAATAGCAAAACTTTTATCTGCTTTTAACTGCACCATATAGGTATTGAAATACTACTGCTTTTATAAAAGTTGTTCCTTTAGTCCTCTTTTAACTGCACCATATAGGTATTGAAATAACTGTAGAGATTGGAGAATTAAAAGACAAGAAAACTTTTAACTGCACCATATAGGTATTGAAATTTGATATATTGTCAAATCCAATGCAGTCAGTACCGTTCTTTTAACTGCACCATATAGGTATTGAAATGTAAGAATATCAGCTACTATCCCAAGGTCCTCACCACTTTTAACTGCACCATATAGGTATTGAAATGGAGTTGAACTGACTTTACAAGATATTTATATTGAGCTTTTAACTGCACCATATAGGTATTGAAATACATACTTTCCATAATGCTCCATTAATATCTCAATCCTTTTAATCGCACCATATAGGAATTGAAAGACATTATAAGGAAGTTTAAACTTCCCTGCTGGAGAACTTCTAATCACACCATATAGGAATTGAAAGAGTATAACTACTTCAGTATTATCAAGCTTAACATTACTTCTAATCACACCATATAGGAATTGAAAAGAGTATAACTACTTCAGTATTATCAAGCTTAACATTACTTCTAATCGCACCATATAGGAAACAAAAA

>NZ_CP013690|6|2|3847529-3848812|CRT
AAATGTTTAGGACGCTATTGGTATTGAAAT	ATAAAAGAGGAGAGAGGATATAATGAAGATTTGCTAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTATCGCATGATCCTTTATGTTATACTGTTTATA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTATACAGTTGACTTTGATGGTAAGATTTACCCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTATCGCATGATCCTTTATGTTATACTGTTTATA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTATACAGTTGACTTTGATGGTAAGATTTACCCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAGTCAATGGATAACAATATACTTATAACAGTTG
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAGGTACACCATGTGAACCTTTTCTTAGCATCCCCT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTATAATATTTATAAAGGATATATAAATTATAACGG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTATAATATTTATAAAGGATATATAAATTATAACGG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAGGTTTCATATTAGGAATAGCAAAACTTTTATCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTACTGCTTTTATAAAAGTTGTTCCTTTAGTCCT
CTTTTAACTGCACCATATAGGTATTGAAAT	AACTGTAGAGATTGGAGAATTAAAAGACAAGAAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGATATATTGTCAAATCCAATGCAGTCAGTACCGTT
CTTTTAACTGCACCATATAGGTATTGAAAT	GTAAGAATATCAGCTACTATCCCAAGGTCCTCACCA
CTTTTAACTGCACCATATAGGTATTGAAAT	GGAGTTGAACTGACTTTACAAGATATTTATATTGAG
CTTTTAACTGCACCATATAGGTATTGAAAT	ACATACTTTCCATAATGCTCCATTAATATCTCAATC
CTTTTAATCGCACCATATAGGAATTGAAAG	ACATTATAAGGAAGTTTAAACTTCCCTGCTGGAGAA
CTTCTAATCACACCATATAGGAATTGAAAG	AGTATAACTACTTCAGTATTATCAAGCTTAACATTA
CTTCTAATCACACCATATAGGAATTGAAAA	GAGTATAACTACTTCAGTATTATCAAGCTTAACATTA
CTTCTAATCGCACCATATAGGAAACAAAAA

>NZ_CP013690|6|6|3847596-3848812|CRISPRCasFinder
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTATCGCATGATCCTTTATGTTATACTGTTTATA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTATACAGTTGACTTTGATGGTAAGATTTACCCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTTATCGCATGATCCTTTATGTTATACTGTTTATA
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTATACAGTTGACTTTGATGGTAAGATTTACCCAG
CTTTTAACTGCACCATATAGGTATTGAAAT	TCAGTCAATGGATAACAATATACTTATAACAGTTG
CTTTTAACTGCACCATATAGGTATTGAAAT	ATAGGTACACCATGTGAACCTTTTCTTAGCATCCCCT
CTTTTAACTGCACCATATAGGTATTGAAAT	TTATAATATTTATAAAGGATATATAAATTATAACGG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTATAATATTTATAAAGGATATATAAATTATAACGG
CTTTTAACTGCACCATATAGGTATTGAAAT	TTAGGTTTCATATTAGGAATAGCAAAACTTTTATCTG
CTTTTAACTGCACCATATAGGTATTGAAAT	ACTACTGCTTTTATAAAAGTTGTTCCTTTAGTCCT
CTTTTAACTGCACCATATAGGTATTGAAAT	AACTGTAGAGATTGGAGAATTAAAAGACAAGAAAA
CTTTTAACTGCACCATATAGGTATTGAAAT	TTGATATATTGTCAAATCCAATGCAGTCAGTACCGTT
CTTTTAACTGCACCATATAGGTATTGAAAT	GTAAGAATATCAGCTACTATCCCAAGGTCCTCACCA
CTTTTAACTGCACCATATAGGTATTGAAAT	GGAGTTGAACTGACTTTACAAGATATTTATATTGAG
CTTTTAACTGCACCATATAGGTATTGAAAT	ACATACTTTCCATAATGCTCCATTAATATCTCAATC
CTTTTAATCGCACCATATAGGAATTGAAAG	ACATTATAAGGAAGTTTAAACTTCCCTGCTGGAGAA
CTTCTAATCACACCATATAGGAATTGAAAG	AGTATAACTACTTCAGTATTATCAAGCTTAACATTA
CTTCTAATCACACCATATAGGAATTGAAAA	GAGTATAACTACTTCAGTATTATCAAGCTTAACATTA
CTTCTAATCGCACCATATAGGAAACAAAAA

>NZ_CP013690|6|2|3847726-3847952|PILER-CR
GCTTTTAACTGCACCATATAGGTATTGAAAT	TTTATCGCATGATCCTTTATGTTATACTGTTTAT
ACTTTTAACTGCACCATATAGGTATTGAAAT	ACTATACAGTTGACTTTGATGGTAAGATTTACCCA
GCTTTTAACTGCACCATATAGGTATTGAAAT	TCAGTCAATGGATAACAATATACTTATAACAGTT
GCTTTTAACTGCACCATATAGGTATTGAAATATAGGTACACCATGTGAACCTTTTCTTAGCATCCCCTCTTTTAACTGCACCATATAGGTATTGAAATTTATAATATTTATAAAGGATATATAAATTATAACGGCTTTTAACTGCACCATATAGGTATTGAAATTTATAATATTTATAAAGGATATATAAATTATAACGGCTTTTAACTGCACCATATAGGTATTGAAATTTAGGTTTCATATTAGGAATAGCAAAACTTTTATCTGCTTTTAACTGCACCATATAGGTATTGAAA	TACTACTGCTTTTATAAAAGTTGTTCCTTTAGTCCTCTTTTAACTG
CACCATATAGGTATTGAAA	TAACTGTAGAGATTGGAGAATTAAAAGACAAGAAAACTTTTAACTG
CACCATATAGGTATTGAAA	TTTGATATATTGTCAAATCCAATGCAGTCAGTACCGTTCTTTTAACTG
CACCATATAGGTATTGAAA	TGTAAGAATATCAGCTACTATCCCAAGGTCCTCACCACTTTTAACTG
CACCATATAGGTATTGAAA	TGGAGTTGAACTGACTTTACAAGATATTTATATTGAGCTTTTAACTG
CACCATATAGGTATTGAAA	TACATACTTTCCATAATGCTCCATTAATATCTCAATCCTTTTAATCG
CACCATATAGGAATTGAAA	GACATTATAAGGAAGTTTAAACTTCCCTGCTGGAGAACTTCTAATCA
CACCATATAGGAATTGAAA	GAGTATAACTACTTCAGTATTATCAAGCTTAACATTACTTCTAATCA


>NZ_CP013690|6|3|3848199-3848744|PILER-CR
	TTTATCGCATGATCCTTTATGTTATACTGTTTAT
ACTTTTAACTGCACCATATAGGTATTGAAAT	ACTATACAGTTGACTTTGATGGTAAGATTTACCCA
GCTTTTAACTGCACCATATAGGTATTGAAAT	TCAGTCAATGGATAACAATATACTTATAACAGTT
GCTTTTAACTGCACCATATAGGTATTGAAATATAGGTACACCATGTGAACCTTTTCTTAGCATCCCCTCTTTTAACTGCACCATATAGGTATTGAAATTTATAATATTTATAAAGGATATATAAATTATAACGGCTTTTAACTGCACCATATAGGTATTGAAATTTATAATATTTATAAAGGATATATAAATTATAACGGCTTTTAACTGCACCATATAGGTATTGAAATTTAGGTTTCATATTAGGAATAGCAAAACTTTTATCTGCTTTTAACTGCACCATATAGGTATTGAAA	TACTACTGCTTTTATAAAAGTTGTTCCTTTAGTCCTCTTTTAACTG
CACCATATAGGTATTGAAA	TAACTGTAGAGATTGGAGAATTAAAAGACAAGAAAACTTTTAACTG
CACCATATAGGTATTGAAA	TTTGATATATTGTCAAATCCAATGCAGTCAGTACCGTTCTTTTAACTG
CACCATATAGGTATTGAAA	TGTAAGAATATCAGCTACTATCCCAAGGTCCTCACCACTTTTAACTG
CACCATATAGGTATTGAAA	TGGAGTTGAACTGACTTTACAAGATATTTATATTGAGCTTTTAACTG
CACCATATAGGTATTGAAA	TACATACTTTCCATAATGCTCCATTAATATCTCAATCCTTTTAATCG
CACCATATAGGAATTGAAA	GACATTATAAGGAAGTTTAAACTTCCCTGCTGGAGAACTTCTAATCA
CACCATATAGGAATTGAAA	GAGTATAACTACTTCAGTATTATCAAGCTTAACATTACTTCTAATCA
CACCATATAGGAATTGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013690.1\|WP_006258819.1\|3846279_3847449_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|372999
NZ_CP013690.1\|WP_006258363.1\|3841355_3841619_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP013690.1\|WP_006258345.1\|3854116_3855820_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|234861
NZ_CP013690.1\|WP_006258364.1\|3840348_3841356_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP013690.1\|WP_006258349.1\|3851436_3852072_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP013690.1\|WP_058699797.1\|3836276_3837047_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_CP013690.1\|WP_006258341.1\|3859741_3860986_+\|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl\|CDD\|236318
NZ_CP013690.1\|WP_025124246.1\|3852781_3853411_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006258369.1\|3833381_3835322_+\|hypothetical-protein	cas8b1	mkCas0106_cas8b1_CAS-I-B	unknown
NZ_CP013690.1\|WP_006258342.1\|3858698_3859745_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|273093
NZ_CP013690.1\|WP_006258365.1\|3839826_3840336_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP013690.1\|WP_016649053.1\|3852130_3852619_+\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_CP013690.1\|WP_006258371.1\|3830558_3832118_+\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|225307
NZ_CP013690.1\|WP_006258344.1\|3856144_3857839_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|181601
NZ_CP013690.1\|WP_006258343.1\|3857851_3858364_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NZ_CP013690.1\|WP_006258350.1\|3849866_3851312_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP013690.1\|WP_006258366.1\|3837030_3839817_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP013690.1\|WP_006258351.1\|3848887_3849778_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP013690.1\|WP_006258368.1\|3835334_3836231_+\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP013690.1\|WP_006258370.1\|3832584_3833379_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|224499

Protein	Function_ID	Function_description	E-value
NZ_CP013690.1\|WP_006258819.1\|3846279_3847449_-\|IS4-family-transposase	gnl\|CDD\|372999	pfam14294, DUF4372, Domain of unknown function (DUF4372). This domain family is found in bacteria, and is approximately 80 amino acids in length. The family is found in association with pfam01609. There is a single completely conserved residue G that may be functionally important.	9.42499e-24
NZ_CP013690.1\|WP_006258363.1\|3841355_3841619_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.22247e-30
NZ_CP013690.1\|WP_006258345.1\|3854116_3855820_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP013690.1\|WP_006258364.1\|3840348_3841356_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	7.49967e-168
NZ_CP013690.1\|WP_006258349.1\|3851436_3852072_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	1.86215e-46
NZ_CP013690.1\|WP_058699797.1\|3836276_3837047_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	5.38734e-26
NZ_CP013690.1\|WP_006258341.1\|3859741_3860986_+\|threonine-ammonia-lyase-IlvA	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NZ_CP013690.1\|WP_006258342.1\|3858698_3859745_+\|ketol-acid-reductoisomerase	gnl\|CDD\|273093	TIGR00465, Ketol-acid_reductoisomerase, ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway [Amino acid biosynthesis, Pyruvate family].	2.16475e-102
NZ_CP013690.1\|WP_006258365.1\|3839826_3840336_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.53524e-51
NZ_CP013690.1\|WP_016649053.1\|3852130_3852619_+\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	7.43543e-33
NZ_CP013690.1\|WP_006258371.1\|3830558_3832118_+\|FAD-binding-protein	gnl\|CDD\|225307	COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only].	7.29427e-109
NZ_CP013690.1\|WP_006258344.1\|3856144_3857839_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|181601	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed.	0
NZ_CP013690.1\|WP_006258343.1\|3857851_3858364_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	7.07402e-28
NZ_CP013690.1\|WP_006258350.1\|3849866_3851312_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.13817e-115
NZ_CP013690.1\|WP_006258366.1\|3837030_3839817_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.10934e-37
NZ_CP013690.1\|WP_006258351.1\|3848887_3849778_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	2.28148e-12
NZ_CP013690.1\|WP_006258368.1\|3835334_3836231_+\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.59715e-43
NZ_CP013690.1\|WP_006258370.1\|3832584_3833379_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|224499	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	7.62485e-16

>NZ_CP013690.1|WP_006258819.1|3846279_3847449_-|IS4-family-transposase
MVNITLFSQIIAKLDRSKFKKIVKEKQTDKHNKGFNSWSHLVSMLFCHFARSKSVRDISNGLRSATGNLNHLGIDRAPSKSSVSYQNINRTHKLFKEYYFVLLQSLGQHPKFKQVKFRIKSKILLLDSTTISLCLSIFDWAKYKTNKGAVKMHTLLDFDGNLPAYINITNGKTADNKGAYDIPLLKGSVIVADRFYNDFSLLNVWDSKQVFFVIRHKDNLKFETIKELELPENRHQNILKDEIITLTNSNSKQLYPNKLRRVAVWDQENEQVIELITNQFTWTANTISELYKSRWMVEIFFRDLKQLLHIKSFIGTSENAVMIQIWTALITILILKALRAQSQFGWHLSNLVAFIRLNLFVKIELQKWLDNPINEVEKPPPKLIQGVLF
>NZ_CP013690.1|WP_006258363.1|3841355_3841619_+|CRISPR-associated-endonuclease-Cas2
MYVILVYDIGERRVGKMLKLCRRYLNWIQNSVFEGEISEVKLKALLAEAKEIMNKEEDSVIIFKSREERWLEKQVVGKEKNELDNFL
>NZ_CP013690.1|WP_006258364.1|3840348_3841356_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTYYLFNPGRLSRKDNTLKFVPTDANGSEGTPKYIPIEGVADLFCFGSLDANSALYTFLGKQGIAVHFFDYYEHYSGSFMPKEYLLAGKMQIEQTKNYIDKKKRLVLARKFVSGASFNMVKNLRYYINRDRDLQDIQDAIERYSSLIEGSNEVDELMGVEGNIRQMYYSAFNDIITSDFTMDTRSKRPPQNEINALISFGNMMCYSLCLSQIYHTQLNPTISFLHEPGYRRYSLALDLAEIFKPLLVDRLIFRLLNKKEIQANDFDHKLNSCTLKESGRKIFVRAWEEKISETFKHPVLKRNVSYKHLIKLECYKLSKHILGIEEYKPFKARW
>NZ_CP013690.1|WP_006258365.1|3839826_3840336_+|CRISPR-associated-protein-Cas4
MLINATHINLYHVCKRELWLHYHGIRMEYNSDLVAEGKLLGELSYPERSEKYTELQLGNVKIDYYDARNKVVHEVKKSDKVEQAHKAQVKYYLYRLLQAGVEGATGIIEYPSLRQREYVTLDLGDIDIIKKWEQEIQEICEGDKCPKTIHAKICRSCSYCDFCYIEEED
>NZ_CP013690.1|WP_006258366.1|3837030_3839817_+|CRISPR-associated-helicase/endonuclease-Cas3
MYNSYKTIQQILMEVPSLRSYLRDEDTYYAHRDRNGLKAPETLVEHIELVEKYFLQLIRDHHLDEVIDTLISDYLKVVGVDNNSVGEEIKRQFVCVIRFHDHGKVNENFQADSTKMNNANFYGMEIKDSVLSTTHSSLGAFIFLVDQFESILKMVKPKEIYCLVFTAYVFSYSIFKHHSSSINDNVEDTLNMDTLFNNEREKVLEFMSKYLPLFGYKIRKELIAYVGNKNLLRNIFKDFNKSDAMYSLLKLNFSLLTASDYLATNEYCNSYKNVPVKSILDNGVFSFDRINEIYQNVTTKEKLVNNKEKVNFNSKTYSDLEGYILSNPRTLSGDNLNVLRKEMGIEVINNIRKNIDKNLFYIEAPTGGGKTNLSALAAIELLKAHKGKINKVFYVFPFTTLITQTKASLKETLGLTEDEIIELHSKASFTEKSEHDDTYGKDKLNYITNLFVHYPMCLLSHIGFFDIIKSNRKENNYLFHRLANSVVVIDELQSYNPSQWDKVIYFINHFAKAFNIKFILMSATLPKLDKLDFLKEKVNDFVYLVPDAKEKYFRNPNFCERIAFNFEYFEKRVSLSELADRLVEESKQYATFDYGKAKPKDSVYTIIEFIYKQSATDFYDLLKECDFFDEVFVLSGTILEHRRQYIINFLKDNDNRHKKILLITTQVVEAGVDIDMDLGFKDRSLIDSDEQLAGRINRNVNKKNCKLFLFDYNKESAVYGSDLRYKLTKEKITPKLYKEILEKKDFDQLYDLVINNRNQWSAKPMVENVKDYITHLKELRFESVANDFKLIDSNNISCFIPLEIPINIGDTSFFTQKELDFLVLYNIKPTKENKICGVKVFDLYTDIICNRVDFISQKIREKQLQSIMSKYVFSVFATKNIENQLAHYNNPDKSKFGYEYIERWNVFYTEAGGMDTMSLNGIEESQFL
>NZ_CP013690.1|WP_058699797.1|3836276_3837047_+|type-I-B-CRISPR-associated-protein-Cas5
MKIVSIDLCSDFGFFRKPDTNNTINLSYNMIHKPAVLGLLGAILGLGGYKKKDVLPDYYLKLKDLKIAIEPLMHDKGNFAKTAIKYTNTVGYANKGNNFLTEELTLVKPAYRIYLLLDESNELESKLLEYLKNANAEFVPYFGKNEFTAWWTKESFKEYSFEIPIEDLEHEVAIKSLFLKSMNVKDNKETPYPVFGSMEMVENTFVYFERLPDGFNEELMQYNLEDFAYTNFLIKNSKILDNLYCLKELDAYVQFI
>NZ_CP013690.1|WP_006258368.1|3835334_3836231_+|type-I-CRISPR-associated-protein-Cas7
MSTSFKNRVYGAVVIKSINSNYNADFSGQPRKLPNGVVYATDKALKYSIRNYWKNALGESVFYFKSLNENLAPRDLKETYEVKYKDIKNDKVDVLANLLQSIDVRLFGGTFAVKSVNLSLHGTCQITHGVNKFSENVIYTEQILSPFRNSNKEDADNSTLGSQSRLEEGHYVHHFSVNPKNIEEDAERVKSAGVLVEDIAKLKEGMCKGASYYDSAAKSGTENELLLWVELKEGSKVVLPSFVNLIDINDSREIDLQKVQALLKEEHIAKDVLKIELFYNKTLTKVINEPIGATVLAI
>NZ_CP013690.1|WP_006258369.1|3833381_3835322_+|hypothetical-protein
MIKEIVNFMRLLPDDFKTMGSQPKEGLHILLHQKVDRDQICSIDLVNFEYEMYSKKDEEVSPFLEECKIRHQNAWCIDTNKCFDLPIKAIHSCSPFMVAFKREHLKGGTKYLANAGGKKKQIYERFVDYFEKAFALFDNDNEKHKYEVYRNFFTQEQFVTIIERIERNFDIERSNLLTKKEEINELLKKTIDKVEKENIKLELKKLDQSLLKLRDLSDGEYLIFYLDLPVDQYKSVHKKYLDDKLFNTDKYNTPPDESGIIYGTSNFMNGFNSNMPFLMHQSASFDITGRITNEEAKLLHEFKGVLPNKVLPNPLPLFVYKDELNGDMVRILRENGFKLGYQEIIQKMVNEKNSDLSNYYLLYWQNTKDGLVFKDYDFISNFEYKFGTIDSNKLCVENLFEAYDDKKLKGNVVITDVFHLENVVFKPLIGNKYHKVDCFSDLNTDGYEILPNTFVSYSKYRKVVYDYVYKSQRQVIDYNVFYEMVFNSIKDSIKNGYINSVKEKLNIWYSVQHHFNQQNKEYMGSKLKEYQSFVNELISEEGLQMKANDEHFAFTAGMVISYILNKSKSADNSYLLLEPYLQQAKCSEFKKAIANDFARYKHENFSRSFERAAAFVLSYETEVNLKKLMPEILSGVFAKNQLYSSK
>NZ_CP013690.1|WP_006258370.1|3832584_3833379_+|CRISPR-associated-endoribonuclease-Cas6
MRFRIKLEAIDKERIIPANYQYPLSAAIYKIISKGDNDYATFLHQEGYGKGLKLFCFSDIKCPFVIEGDRLLLQQNELEVQVAFHLPEAMQHFVQGLFASEKINISDKKSRQDFRVKTIERINNKLSVYKENEIVSICVRPISPLVIGLKREDWSYEYLNPEHSRYQEMFVYSWREKIKAAYGEEEADNAFLAMEVKFYDKPYRSRLVTIKQGTPQQTKIKGYVNFKIEVKGERRFIDLLLNAGGGVYNAQGLGFLEIVEEKKI
>NZ_CP013690.1|WP_006258371.1|3830558_3832118_+|FAD-binding-protein
MPQELQLQVLPEVAGTADLLTQYVANHVKCSPKDIKHITILKRSIDARQRTVKINLKVAVFFADEDVVHRHIDFPEYKNVKDAPRVIVVGAGPAGYFAALQLIELGVKPIVVERGKDVRGRRRDLKAINIDHIVDPDSNYCFGEGGAGTYSDGKLYTRSKKRGDVNRILELLVAFGASQDILVEAHPHIGTNKLPKIMQDMRAKIEEFGGEVLFEKRVVDFVIKGNEIEGVKLHNGDLIEAKKIILATGHSARDIYELLNRKKVLIEAKPFALGVRAEHPQTLIDKIQYSCDYRGEFLPPAPYSIVKQVNGRGMYSFCMCPGGVIAPCATAPGEVVTNGWSPSKRDQATANSGIVVELRLEDFKPFEKFGALAGMEFQKSIEQQAYRVAGETQRVPAQRMVDFSQSKVSESIPKTSYLPGTTSIELGQVFPGFLTQIMRQGFQEFGKSMKGYFTNEAILHAPESRTSSPVRIPREDYTLEHPQIKGLYPCGEGAGYAGGIVSAAIDGEKCAIMCVESMQ
>NZ_CP013690.1|WP_006258351.1|3848887_3849778_-|DMT-family-transporter
MEQSGILNATTKSSNGWLNGFIGVLLFAGSMPATKMAVKDLDPIFATAARAVIAALLALACVIALREKRPTKEQMWPLIKVAIGGVIGFPLLTAMALEYITSAHSLVFMGMLPLSTAIFAVFIGKEKPKPIFWLFSLIGSALVIGFAFSQGVSSNPIGDILMILAIILCGQSYAEGAKLSKTLGGYQVISWACIISLPLTVPIMIYTVPTDLVLVSGESWFGLFYISVVSMFLAYIFWYKGLAQGGIATVGQIQLLQPLLGMILAATVLNEKVSPTMLYVTFGVILCVAASKKFAK
>NZ_CP013690.1|WP_006258350.1|3849866_3851312_+|PLP-dependent-aminotransferase-family-protein
MNMSKTFLYSEIAENIASQIRSGNIREGEKLPSLRGLCAEYEISMNTARRVFLELESLSLIYSKPQSGYFVSKLSYKNLPLPEESNPILLANHCEPNDILQKVYANIGREDLLLLSYTVAYGDMLPIAKLKKEIVQATRDLPTGGVQYERLEGNANLRRMIALRSSGWGANLQEEDLITTNGGMNAVALCLTALSKPGDTVAIESPCYPGILQLALGLGLKVFELPTNPNTGIKVEALREVVSEIDICILISNYNTPVGSCMPDENKKEVVELLAQHDIPLIEDDVYGDLCFEGHRPTCCKTFDKTGNVLWCSSISKTLAPGFRVGWVAPGKYKDKVQNIKLIQSISSSSLEQEAVANFLRSGKYDKHLRKLRRKLYQNYQNYARVIQQSFPKNIKISQPQGGLSLWIEFSEEIDTIELYDLAMKKGISIAPGRMFTLQNQYNNSMRLCFGLPWDVQLEGKIKQIGLLARQLQNLKTVNTE
>NZ_CP013690.1|WP_006258349.1|3851436_3852072_+|LysE-family-translocator
MIPLHDLMLFAIAAVVLAITPGPNMLYLITRTLSQGKRAGFISLMGVICGFLFHIILVSFGLTAILFTIPYAYAILKWTGALYLVFLAFQALKPNAKNIFDVEQSVKVDSPSKLFSIGFLTNVLNPKVAVFYLSLFPQFIKPAYGSVLVQSLTLGTTQLLVSFINNFLIVLFAAKMASFFQRQPLWVKVQKWFMGSVLLFLAFKMAISKGK
>NZ_CP013690.1|WP_016649053.1|3852130_3852619_+|PaaI-family-thioesterase
MSINRTRTFSWEDPNKTLEEAKKLNGYEFLMQVLEGNLPMAPIQETISSRVVSVEKGQVIFELKGEEFHYNPIGSVHGGIISTVLDSAIGCSLLSTLEVGESFTSLDLKVNFLRRITADTPPLTTKTKIIHKGRTTAYLECELLDAEGKLYAHAVSNCMIFR
>NZ_CP013690.1|WP_025124246.1|3852781_3853411_+|hypothetical-protein
MKKRYFILIMIGVIITLGVVFSETIVLRLVGVQELEVFSQKDYEESLVKLKEKYPERAQFLISTQEQFISYSSLVEKDKQYILTKPIQLLYFKEDSLVSIHSSCNVPINYWTWKLDWNIDNRFEQFPPLSSTSTLDIKLKQIQDVYGFRRENTSENTLIVFWSRMMEKQVYGALETVIYNKRLSNKKEKLNTIFINVDHAFLGKIVLDE
>NZ_CP013690.1|WP_006258345.1|3854116_3855820_+|dihydroxy-acid-dehydratase
MNVLNKYSRVITQDQTQPAAQAMLYGIGLSEEDLDKAQVGVVSMGYEGNTCNMHLNDLAKYVKQGVKQSGLVGLIFNTIGVSDGISNGTEGMKYSLVSRDIIADSIETVVNAQWYDSVIAIPGCDKNMPGAIIAMGRLNRPAIMVYGGTIHSGKYKDESLNIVSAFEALGKKFSNSISEEDYKGVIKNACPGAGACGGMYTANTMASAIEALGMSLPHSSSYPALSSEKKQECLEVGQALRNLLEKDIKPSDIMTREAFENAMTMVITLGGSTNAVLHLIAMAHAVDIEITLKDFQEISDRVPVLADLKPSGKYLMEDLHKIGGVPAIMKHLLDQGLLHGDCLTVTGKTVRENLSLAKDLTKDQDIIVDITTPIKESGHLQFLYGNLAEKGSVAKISGKEGTFFKGKARVFNDEYAVIASVSAQEVQPGEVIVIRYCGPKGGPGMPEMLKPTSAIMGAGLGKSVALITDGRFSGGTHGFVVGHITPEAYDGGTIALVENGDIISIDVENRKLELLVDQKVLEARREKWQKPALKFKKGVLYKYSNCVADASEGCITDRIKNVYPSGN
>NZ_CP013690.1|WP_006258344.1|3856144_3857839_+|biosynthetic-type-acetolactate-synthase-large-subunit
MQQEKLTGAQAVISSLLCEGVETIFGYPGGAIMPIYDALYDKMDELEHILVRHEQGAIHAAQGFARASGKVGVVFATSGPGATNLITGLADAYIDSTPVVCIIGQVTSQLLGTDAFQETDVIGISMPITKWNYQVTKASEIAPTIAKAFYLAKAGRPGPVVIDITKDAQFGMTAFEYKPCSEVRSYAPEPSVDLERFHQAADLINKAKKPYLLVGQGVLLSHAEQELKAFVEKTDIPTASTLLGLGALPSNHSHFCGMLGMHGDYAANVKTNECDVLIAIGMRFDDRVTGDVSRYAKQAKVIHIDIDAAELNKIIKADIGIQSDAKKALNTLIELVEQRTHKDWLSEFKQGKAYEVEQLKVHKQQVNADKIMMEDAVKLLTELTKGEVVIVTDVGQHQMITARHYQYNSPKTNITSGGLGTMGFALPAAVGAKLGNPQQTVVAIAGDAGFQMNIQELGTIMQSNIGVKMIILNNSFLGMVRQWQQMFFEKRYSFTEMNNPNFVGIAQSYNIKGNKVEHATDLRHALEEMLVHPGAYLLEIVVEKEENVYPMIPTGASVSDVLLN
>NZ_CP013690.1|WP_006258343.1|3857851_3858364_+|acetolactate-synthase-small-subunit
MKEEFTLSVFTENSIGMLTRITNVFTRRHINLDSLTVSESEIKQVFKYTVVFKSTQEQVDKLIGQLERLVEVFKVFAHKNSDIIYQELALYKVKTNLLSNTQVEQIIRANQARILSVDKDFIAIEKTGYIEEIENLFTQLSSYGVLEFTRSGRVAITKPMNYEELYLIKN
>NZ_CP013690.1|WP_006258342.1|3858698_3859745_+|ketol-acid-reductoisomerase
MGQINFGGTLENVVTREEFTLDKAREVLKNEVLAVIGYGVQGPGQAQNLRDNKINVIVGQRKNSTSWDKAVADGWVEGETLFDIEEACQRGTIIMNLLSDAGQIHTWETVKGNLSAGKALYFSHGFGVAFHQKTNIIPPAGIDVFLVAPKGSGTSLRTLFLEGCGLNSSYAIFQDATGRAQERALAVGIAIGSGYLFETTFEREAYSDLTGERGVLMGAIAGIFEAQYNVLRAKGHTPSEAFNETVEELTQSLMPLVADRGMDWMYANCSTTAQRGALDWKDKFRDATTPVFKELYESVASGREAEIVIKANSEKDYRAKLEEELKELRESELWQTGAEVRKLRPSQS
>NZ_CP013690.1|WP_006258341.1|3859741_3860986_+|threonine-ammonia-lyase-IlvA
MNLLTKVYQAQQNIARVVVQTPLMKNLNLSTVYQADIYLKREDLQPVRSYKLRGAYNKVITLTPDEQSGGVVCASAGNHAQGVAFACHHLDIHATIFMPITTPKQKIDQVKLFGRDKVNIVLKGDTFDACYAEASLYCKENKAVFIHPFDDEEVIAGQGTVALEVLQAMKEPIDYVFVPIGGGGLAAGVSTVFKHLSPHTHIVGVEPAGAASMQTSIQENVNTALNTVDTFVDGAAVKRVGDLNFAICKESLHDVITVAEGKVCTTILKLYNEEALVVEPAGALSIAALDLYKDKLVGKKVVCVVSGSNNDITRTEEIKERSLLYEGLKHYFIVNFPQRPGALKEFVNEVLGKDDDITYFQFSKKNNRERGPAVVGIELANRLDYDHLIKQLEKHNFNYQYLNDNEALFTHLVG

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Crispr_ID: NZ_CP013690_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013690_7

4043548-4043642

Orphan

Consensus_repeat	Method
CCAGTTCGCGCGGATTTGCAATCCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013690_7

>merge|NZ_CP013690|7|4043548-4043642|CRISPRCasFinder
CCAGTTCGCGCGGATTTGCAATCCGTCCAGAGTATGTAGAAGTGTATCGTATATGTCCAACAACCTATACCAGTTTGCGCGGATTTGCAATCCGT

>NZ_CP013690|7|7|4043548-4043642|CRISPRCasFinder
CCAGTTCGCGCGGATTTGCAATCCGT	CCAGAGTATGTAGAAGTGTATCGTATATGTCCAACAACCTATA
CCAGTTTGCGCGGATTTGCAATCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013690.1\|WP_058699835.1\|4039513_4040344_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP013690.1\|WP_058699838.1\|4047363_4048764_+\|UDP-glucose-6-dehydrogenase	unknown	unknown	gnl\|CDD\|177986
NZ_CP013690.1\|WP_058699840.1\|4049866_4050724_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl\|CDD\|130274
NZ_CP013690.1\|WP_006258148.1\|4038885_4039203_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006258143.1\|4043742_4043934_-\|cold-shock-domain-containing-protein	unknown	unknown	gnl\|CDD\|239905
NZ_CP013690.1\|WP_081048739.1\|4034495_4034675_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699832.1\|4034745_4035249_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699831.1\|4033024_4034305_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|273109
NZ_CP013690.1\|WP_058699842.1\|4051514_4053575_+\|tetratricopeptide-repeat-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP013690.1\|WP_006258146.1\|4040580_4041465_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006258153.1\|4035314_4035479_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699836.1\|4042156_4042399_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006258140.1\|4044399_4045512_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP013690.1\|WP_058699837.1\|4046012_4047014_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006258141.1\|4043946_4044375_-\|cold-shock-domain-containing-protein	unknown	unknown	gnl\|CDD\|239905
NZ_CP013690.1\|WP_006258130.1\|4053663_4054293_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP013690.1\|WP_058699841.1\|4051226_4051484_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699839.1\|4048765_4049815_+\|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|187557
NZ_CP013690.1\|WP_058699833.1\|4035605_4036436_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_CP013690.1\|WP_058699834.1\|4037318_4038257_-\|Dyp-type-peroxidase	unknown	unknown	gnl\|CDD\|367887

Protein	Function_ID	Function_description	E-value
NZ_CP013690.1\|WP_058699835.1\|4039513_4040344_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.40249e-13
NZ_CP013690.1\|WP_058699838.1\|4047363_4048764_+\|UDP-glucose-6-dehydrogenase	gnl\|CDD\|177986	PLN02353, PLN02353, probable UDP-glucose 6-dehydrogenase.	0
NZ_CP013690.1\|WP_006258143.1\|4043742_4043934_-\|cold-shock-domain-containing-protein	gnl\|CDD\|239905	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. CSP expression is up-regulated by an abrupt drop in growth temperature. CSP's are also expressed under normal condition at lower level. The function of cold-shock proteins is not fully understood. They preferentially bind poly-pyrimidine region of single-stranded RNA and DNA. CSP's are thought to bind mRNA and regulate ribosomal translation, mRNA degradation, and the rate of transcription termination. The human Y-box protein, which contains a CSD, regulates transcription and translation of genes that contain the Y-box sequence in their promoters. This specific ssDNA-binding properties of CSD are required for the binding of Y-box protein to the promoter's Y-box sequence, thereby regulating transcription.	1.36109e-21
NZ_CP013690.1\|WP_058699840.1\|4049866_4050724_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl\|CDD\|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	3.53694e-167
NZ_CP013690.1\|WP_006258130.1\|4053663_4054293_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.9938e-14
NZ_CP013690.1\|WP_058699831.1\|4033024_4034305_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|273109	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin].	0
NZ_CP013690.1\|WP_058699842.1\|4051514_4053575_+\|tetratricopeptide-repeat-containing-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.60195e-24
NZ_CP013690.1\|WP_006258140.1\|4044399_4045512_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	5.91591e-147
NZ_CP013690.1\|WP_006258141.1\|4043946_4044375_-\|cold-shock-domain-containing-protein	gnl\|CDD\|239905	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. CSP expression is up-regulated by an abrupt drop in growth temperature. CSP's are also expressed under normal condition at lower level. The function of cold-shock proteins is not fully understood. They preferentially bind poly-pyrimidine region of single-stranded RNA and DNA. CSP's are thought to bind mRNA and regulate ribosomal translation, mRNA degradation, and the rate of transcription termination. The human Y-box protein, which contains a CSD, regulates transcription and translation of genes that contain the Y-box sequence in their promoters. This specific ssDNA-binding properties of CSD are required for the binding of Y-box protein to the promoter's Y-box sequence, thereby regulating transcription.	4.35752e-14
NZ_CP013690.1\|WP_058699839.1\|4048765_4049815_+\|dTDP-glucose-4,6-dehydratase	gnl\|CDD\|187557	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs. This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP013690.1\|WP_058699833.1\|4035605_4036436_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	3.82882e-21
NZ_CP013690.1\|WP_058699834.1\|4037318_4038257_-\|Dyp-type-peroxidase	gnl\|CDD\|367887	pfam04261, Dyp_perox, Dyp-type peroxidase family. This family of dye-decolourising peroxidases lack a typical heme-binding region.	1.78092e-90

>NZ_CP013690.1|WP_058699836.1|4042156_4042399_+|hypothetical-protein
MKKLRQINFLFVVLALLLVNCSRSKKLNGTDYDQLYAVWYSDDYRDSLAETLKPSIKKALSLKNTPDNRVFIDSVLNQLR
>NZ_CP013690.1|WP_006258146.1|4040580_4041465_+|hypothetical-protein
MNKNLQKYITLDQSYFFDIDEVYCGAEIIVQRLINYDLYQRLHSEECKNYTQQELCDYYEKAIQTEQVVLDKGGYIIDNSFFHGEFCVGEFGLLDGECKLRSKVNGSIFDLTFVKGVAVEGSVKEEDIVTSRFSLEDRIFTVEGFESGKLVSKQVIHFDLELDYNTIFYSYYEDESVESIEDNINQAHKVYYRNGNIQKIKDVLNERTQFFDNRGVLTEEFFIEKGYRCSLTYQDGVLTDKTCIGEEDKYFYFYKEGKLDFYEVLDKATDTISVYKSSGELVQQDSLIQLGFTS
>NZ_CP013690.1|WP_058699835.1|4039513_4040344_-|IS5-family-transposase
MYQVLHKDSIELDIVPHLPLPKRGFKSKAPLYEIVSAILYKLKTGIQWSYLIVQALFSTQILSHKTVFGHFRNWCKAGVWQSCWTELLKKNKSLIDLSSGDLDGSHTTALRGGEQVAYQGRKKRKTTNSLYFTDRQGLPLAMSEPIAGNHNDLFDIEIYFEDITDQLTKAEIPLSGLFINADAGFDSQKLRKIFSDKEIIANICPNKRNGQNNEDDYFDEQLYKERYAIERTNAWIDSFRSLLNRFDTTLSSWMAWNFMAFIVIGLKKFQKTKKSR
>NZ_CP013690.1|WP_006258148.1|4038885_4039203_+|hypothetical-protein
MEIVLWVIVSLVFLGSLVMFVPSLMSLASPRAKELKGMYYWNSIVSKTFCVLVMLYPLVFLIAVLFYFFLQSPVLSWLVSYAILVVLLFAMWNRLDKKVNGGKKN
>NZ_CP013690.1|WP_058699834.1|4037318_4038257_-|Dyp-type-peroxidase
MSQKAQNVTDYPNNNTIFSVWKFKEGAEIKQAFEALCGLVNNLNNSFKVRVNAGPTSCILGVSHNAWLKLDLPTPMPKELKVFEEIKGDKHTAVSTDADLHLHLSAINPAICYDMAMAISKVLLPVADCIDEVQGFKYWDGRAIIGFVDGTENPIGEDRDYFGIVGNEEPQYKGGSYLFVQKYIHFMKDWDNLSTEEQEKVIGRYKATDIEMEEEKKPANSHTALTAIEDENGNELKIIRANMPYANPSKGQAGTYFISYASTFSTTEKMLKNMFIGEPAGNYDRILDFSKAISGTLFFVPSLDILDDYSAE
>NZ_CP013690.1|WP_058699833.1|4035605_4036436_+|AraC-family-transcriptional-regulator
MNVKYCLPRKELRGIVSRFWHGEVDLIEGEGLYRIIASGNTGIIIQLFQNRSVLYNKENQKALPKSFIYGQKSDNPCLNYFAHKATVLGVDLHPTAFKKIFGFHTTELTNTLADAEDLLPSEVCRQLYESTSTQEAIKILENHFLRYAITSSNQEIEYIIQKLNKTCELANTTSLAEEVNISRRSFQRKFKEVVGIDAYTYSRIMRFQKALHFMQNSQATSLTQVAYEVGYADQSHFGREFRVFVGESPKAFLQNSHFMDTSQIDISIPFRIIGVE
>NZ_CP013690.1|WP_006258153.1|4035314_4035479_+|hypothetical-protein
MKIIGWGIIAIAVLFLGMCIGGLNGNTPEEFLVLLALLGVILGAYLIYKSQHKE
>NZ_CP013690.1|WP_058699832.1|4034745_4035249_+|hypothetical-protein
MKQIILLFASMTLLLFACKKSAGSHGFTIYGESDYYKDGVYCAEVMYENPYTKSSSTYQVSVEVKDGNLVHINWPSEGWLDDVNFSTQNITDGECSFMSERGYRYTITLGGLGGECYDDSEELQNHVNEDTAQATCPECGEMRAIQEKHCVYYANSVILENNWDRHF
>NZ_CP013690.1|WP_081048739.1|4034495_4034675_+|hypothetical-protein
MINSSLLIGVSVLSMLVFAGNYSSVTYATCTGSSNCKACKNCKYCKHCSQKGNSCGVCK
>NZ_CP013690.1|WP_058699831.1|4033024_4034305_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MKNRQENLIERDYAVNWHPYTQMKTAQNIIPIVRGEGSYLYDANGKRYIDAVSSWWVTLHGHSHPYIAQKMTEQLTTLEQVIFAGFTHQPAIELSERLLALLPSNQTKTFYTDNGSTAIEVALKMAIQANYNKGGKKNKVIAFKNGYHGDTFGAMSVSGRGIWTDPFGDMLFEVLFIDVPTAENLESIKKTIDTHAEETICFIYEPLVQGAGGMLMHKAEHLSALMSHCKERDILLIQDEIFVGFGRTGQLFAANHLSESPDIMCFSKGLTGGTLPLGITTCTEDLYQAFYADDKTKALFHGHSFTASPLACTAALASMDLLLSKDTQDHINRIVEQHKGFIQQLKQHPKVQDARQCGTIFAMEWKTTECTSYFSDMHDILYPFFLERGVLMRPLGNIIYLVPPYCTNDEDLAYIYSCILEALEMI
>NZ_CP013690.1|WP_006258143.1|4043742_4043934_-|cold-shock-domain-containing-protein
MQEGTVKFFNETKGFGFITPNDGGQDIFVHTTGLNERVRENDAVVYEVEKGKKGLNAVNVRRA
>NZ_CP013690.1|WP_006258141.1|4043946_4044375_-|cold-shock-domain-containing-protein
MADSFSKKEKNKKKAQKRQEKALKREDRKVNNNKGKDLEDMLVYVDYNGNLTDVPPEEQDIEAAKRELEERLAAASAPDTECTGVVTYFSSKGFGFITEDDSKENIFVHSSQSNQPLQQGDKVTFKKERTPRGLSAVEVNKI
>NZ_CP013690.1|WP_006258140.1|4044399_4045512_-|DEAD/DEAH-box-helicase
MNFKDLALTQEIQTALTKIGYSTATEIQQKAIPPILEGKDVIGTAQTGTGKTAAFAIPILQKLHSTPKSTKGIRALILVPTRELAIQVKDSFLDYSTELPLKTVTLFGGVPLPPQVRALKQHPEIIVATPGRLLDLINQKIVKLSNLEILVLDEADQMLDMGFIHDLKKILKFVPTKRQSLFFSATMPKEIEQFARTIVYKPVKIEVAAEVITATTIEQQVYYTEKKDKKTLLHTILKENTESTLVFTRTKYEANNLVKYLQKVNMVAMAIHGNKSQSARVKALDDFKNKKINILIATDIAARGIDISKLPFVINYDIPDKPETYVHRIGRTGRAGVQGVAMCFCTPEQRKELKDIQRFTGIKMQVKQEI
>NZ_CP013690.1|WP_058699837.1|4046012_4047014_+|hypothetical-protein
MKTISWLTIVQQHNDLVRRWFICCCVLMSSLLWGQQVDEDQVSVVKLWRDLNGENSLYIKVGATCNNYDSKGIFAKNGYESIISIELINEENKVSVNYGERLPDNQMLMFYDEGIWFEEHDDIQAVFIPVFYCRPYFGSQMPLTYIVLYNGKRYMYHFDYYCQSDILGTCSLPYSKSKVQKRVSDLPKELAKKFTNYLTKVYTHREDLFPNHLIFRTEKYSNTYRPYDLATAYHASYPYVLLDKVNGYLEEKKYSLATTYLNEFEYIYVREELTVNVAGFYVQDRTISQKAETYRSRLHTEREQLLEEAKFLTRRNQYQEAYLIYRVMLEEEG
>NZ_CP013690.1|WP_058699838.1|4047363_4048764_+|UDP-glucose-6-dehydrogenase
MKNIQKICCVGAGYVGGPTMAVIAQKNPHIQITVVDLNEARIQAWNDEDLSKLPIYEPGLDVIVGEARGRNLFFDTNVDKAIDEADMIFISVNTPTKTYGKGKGMAADLKYIELCARQIARVAKTDKIVVEKSTLPVRTAQAIKRILDQTGNGVEFQILSNPEFLAEGTAIQDLMNPDRVLIGGAETKEGQEAIEALAAIYGAWVPQERILRTNVWSSELSKLTANAFLAQRVSSINAISELCEVSGADVAEVSRAIGTDSRIGNKFLKASVGFGGSCFQKDILNLVYIAKSYGLDAVADYWEQVIIMNDHQKRRFAENIVTTLFNTVNDKKIAFLGWAFKKDTNDTRESAAIYVANDLIEEEAQIHVYDPKVTEQQMLSDLDYLATREVALNQKHLTVHADPYAALEGAHGIAVLTEWDEFKAYDWQRIYDKMQKPAFVFDGRNILDRQALEEIGFEVYTIGRGK
>NZ_CP013690.1|WP_058699839.1|4048765_4049815_+|dTDP-glucose-4,6-dehydratase
MKKIVITGGAGFIGSHVVRQFVNKYPEYHIYNLDALTYAGNLENLIEVQSASNYTFVKGDITDEAFINALFQKEKFEAVIHLAAESHVDRSITDPLAFVKTNVMGTVHLLQAFRTLWQDNWDGKRFYHISTDEVYGTLGEVGLFTEATAYDPNSPYSASKASSDHFVRAYGETYGMPYVVSNCSNNYGPNHFPEKLIPLCIHNIIHNKPLPIYGDGKYTRDWLYVLDHARAIDDVFHRGVNAETYNIGGFNEWQNIDLVKELCKQMDVVLDRTAGESERLITYVKDRPGHDLRYAIDATKINKELGWSPSVTFPEGLAKTIQWYMNNQEWLENVTSGAYQEYYRQQYQK
>NZ_CP013690.1|WP_058699840.1|4049866_4050724_-|glucose-1-phosphate-thymidylyltransferase-RfbA
MKGIILAGGSGTRLHPLTLAVSKQLMPVYDKPMIYYPLSTLMLAGINEILIISTPTDLPNFQKLLGDGSQIGCSFTYAIQEEPNGLAQAFIIGEEFIGKDHVALILGDNIFYGSGMSKLLQACVKKAEPTIFAYSVTDPQRYGVVEFDQHKNVLSIEEKPLEPKSNFVVPGLYFYDNDVVNIAKAIQPSKRGEYEITDINKEYLRQGKLKVGILDRGTAWLDTGTFASLMKAGQFVQVIEERQGLKIGAIEEVAYRMGYITKEQLHHLAKPLCKSGYGEYLMTIE
>NZ_CP013690.1|WP_058699841.1|4051226_4051484_+|hypothetical-protein
MKKIYFMMGLVTLSTMVVSCSNDDNLQQDIEVKQREKQAEAQGVLTIKDETEIETKSFSNDNMSDRGDFDLDKDKTKREGKGKGK
>NZ_CP013690.1|WP_058699842.1|4051514_4053575_+|tetratricopeptide-repeat-containing-sensor-histidine-kinase
MQYNKAIHLWIALLFWRYKRIVMRFSLLLFLFCFLSCNGLVEKKAKETNYFEGYSKAIDKEVYLDSIASLIIKRPNDSLTREALLRLANRYEWIKQDKKVKKNLEKLYTYSKQQGDTAHIAKTYWYLGDYYDRRQILDSAYFYYLKAEKLYALQKDSINWAKMLSYKAGVLHDTGVYTESETTIAQVLQVLSKQKNTRLIYEANFQMASVLKELKEYRGALEYYVKIPELLNRLEEEGYDRYNLQRSWLSYYNNIGGYYQEVGNLEEAKNYFQTALRNQYVDSFPRLKAMVLNNYGYNQMLLCDDPLVIQPTLESALDIRKQINHKQGIVASKIRIAELNLLKKDTIGALVLMKEAYTMAAEDKNLYELIESLKFLSEYDVNDKEVYTTIYLRTQDSIRTLERQTRNKFARIEYETGEIEKRNDLLKQRNTYLGGVILLVVLLSIVFFIVLSLQMKNKKLLYQQKDQQAIHQIQALLLQQQSITYKAKNKQRKQIAKDLHDSIINRVFTVRINLGQLSTDQTKEKEKLIDQLTQIEAQTRALSHNMHKTLFNQEQDFSLVLENLILSQKNPFQTVFECSIDRLINWDFYTWYQKAQLYLIVQVLLQNVNKHAHASKCLVIILLSEQHIVVKIHDNGIGIDTKKINKGLGFKNIRHRLQSLQGKMTISTLNQMTTISLEIPYSEKEV
>NZ_CP013690.1|WP_006258130.1|4053663_4054293_+|response-regulator-transcription-factor
MTILLADDHFMTLEGYISILNNESNTYIKAQNCEELYKQILGLEQLDVAIIDYDMPIYKEQNISSGLDCTTLIKERFPKCNIILITAHEEALILYSIYRNKTIDALIVKSDFSAKTLQDLILNDKGPELFYSPIAKESIKKVIAKNTLLDPKNREILMYLSHGYKITQLESFVFLSTSAIQKRISKMLHEFNVTDYQELIQIIKHNQLL

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Crispr_ID: NZ_CP013690_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013690_8

4077206-4077281

Orphan

Consensus_repeat	Method
TTTTAAATCTAGCAACAAAGATTAA	CRISPRCasFinder

1 spacers

PD-DExK

The CRISPR arrays of NZ_CP013690_8

>merge|NZ_CP013690|8|4077206-4077281|CRISPRCasFinder
TTTTAAATCTAGCAACAAAGATTAATTAAAGTGTGAGTTTTGTTGTTACTTTTTTAAATCTAGTAACAAAGATTAA

>NZ_CP013690|8|8|4077206-4077281|CRISPRCasFinder
TTTTAAATCTAGCAACAAAGATTAA	TTAAAGTGTGAGTTTTGTTGTTACTT
TTTTAAATCTAGTAACAAAGATTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013690.1\|WP_006261438.1\|4077434_4078316_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NZ_CP013690.1\|WP_006258106.1\|4071827_4072577_-\|HipA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377920
NZ_CP013690.1\|WP_058699849.1\|4081380_4082166_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP013690.1\|WP_058699848.1\|4080438_4080750_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699846.1\|4066106_4066442_-\|HipA-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|274416
NZ_CP013690.1\|WP_058700052.1\|4080769_4081396_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699845.1\|4065187_4066114_-\|HipA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377920
NZ_CP013690.1\|WP_006258107.1\|4071497_4071635_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_002992043.1\|4066441_4066645_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|213767
NZ_CP013690.1\|WP_006258094.1\|4083679_4084084_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_036496715.1\|4073026_4074040_-\|DUF1016-family-protein	PD-DExK	COG4804_PD-DExK_CAS-I:CAS-III	gnl\|CDD\|377634
NZ_CP013690.1\|WP_058700053.1\|4082158_4082809_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP013690.1\|WP_036496846.1\|4074135_4075401_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271185
NZ_CP013690.1\|WP_131540958.1\|4082966_4083683_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|225995
NZ_CP013690.1\|WP_058699847.1\|4079391_4080243_-\|RteC-domain-containing-protein	unknown	unknown	gnl\|CDD\|378161
NZ_CP013690.1\|WP_157159100.1\|4084111_4084480_+\|transposase	unknown	unknown	gnl\|CDD\|225995
NZ_CP013690.1\|WP_006261442.1\|4069886_4070234_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376540
NZ_CP013690.1\|WP_006258112.1\|4068063_4069233_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379049
NZ_CP013690.1\|WP_059051141.1\|4067269_4067554_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_006258101.1\|4079074_4079290_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013690.1\|WP_006261438.1\|4077434_4078316_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	9.05741e-16
NZ_CP013690.1\|WP_006258106.1\|4071827_4072577_-\|HipA-domain-containing-protein	gnl\|CDD\|377920	pfam07804, HipA_C, HipA-like C-terminal domain. The members of this family are similar to a region close to the C-terminus of the HipA protein expressed by various bacterial species. This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis. When expressed alone, it is toxic to bacterial cells, but it is usually tightly associated with HipB, and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products.	2.43338e-39
NZ_CP013690.1\|WP_058699849.1\|4081380_4082166_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.90196e-31
NZ_CP013690.1\|WP_058699846.1\|4066106_4066442_-\|HipA-N-terminal-domain-containing-protein	gnl\|CDD\|274416	TIGR03071, couple_hipA, HipA N-terminal domain. Although Pfam models pfam07805 and pfam07804 currently are called HipA-like N-terminal domain and HipA-like C-terminal domain, respectively, those models hit the central and C-terminal regions of E. coli HipA but not the N-terminal region. This model hits the N-terminal region of HipA and its homologs, and also identifies proteins that lack match regions for pfam07804 and pfam07805.	5.12539e-34
NZ_CP013690.1\|WP_131540958.1\|4082966_4083683_+\|ISL3-family-transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	6.08351e-15
NZ_CP013690.1\|WP_058699845.1\|4065187_4066114_-\|HipA-domain-containing-protein	gnl\|CDD\|377920	pfam07804, HipA_C, HipA-like C-terminal domain. The members of this family are similar to a region close to the C-terminus of the HipA protein expressed by various bacterial species. This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis. When expressed alone, it is toxic to bacterial cells, but it is usually tightly associated with HipB, and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products.	8.16975e-60
NZ_CP013690.1\|WP_002992043.1\|4066441_4066645_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|213767	TIGR03070, couple_hipB, transcriptional regulator, y4mF family. Members of this family belong to a clade of helix-turn-helix DNA-binding proteins, among the larger family pfam01381 (HTH_3; Helix-turn-helix). Members are similar in sequence to the HipB protein of E. coli. Genes for members of the seed alignment for this protein family were found to be closely linked to genes encoding proteins related to HipA. The HibBA operon appears to have some features in common with toxin-antitoxin post-segregational killing systems. [Regulatory functions, DNA interactions].	7.12463e-17
NZ_CP013690.1\|WP_036496715.1\|4073026_4074040_-\|DUF1016-family-protein	gnl\|CDD\|377634	pfam06250, DUF1016, Protein of unknown function (DUF1016). Family of uncharacterized proteins found in viruses, archaea and bacteria.	1.80352e-76
NZ_CP013690.1\|WP_058700053.1\|4082158_4082809_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.15751e-42
NZ_CP013690.1\|WP_157159100.1\|4084111_4084480_+\|transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.16925e-20
NZ_CP013690.1\|WP_058699847.1\|4079391_4080243_-\|RteC-domain-containing-protein	gnl\|CDD\|378161	pfam09357, RteC, RteC protein. Human colonic Bacteroides species harbor a family of large conjugative transposons, called tetracycline resistance (Tcr) elements. Activities of these elements are enhanced by pregrowth of bacteria in medium containing tetracycline, indicating that at least some Tcr element genes are regulated by tetracycline. An insertional disruption in the rteC gene abolished self-transfer of the Tcr element to Bacteroides recipients, indicating that the gene was essential for self-transfer.	9.70557e-66
NZ_CP013690.1\|WP_006261442.1\|4069886_4070234_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	6.29217e-07
NZ_CP013690.1\|WP_006258112.1\|4068063_4069233_-\|ATP-binding-protein	gnl\|CDD\|379049	pfam13173, AAA_14, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	9.39628e-38
NZ_CP013690.1\|WP_036496846.1\|4074135_4075401_-\|site-specific-integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.62864e-51

>NZ_CP013690.1|WP_036496846.1|4074135_4075401_-|site-specific-integrase
MKNCEYGNDKKSTFKVLFYLKKNAPKKNGKVVIMCRVTVNGKQSAFSTKLDISATNWDLKYGRVLGKSREAQEVNGKLDKIRLGIEECYSKILKNEETVNSTKLKNTFLGMGSGELTFFKFYEQFIADFEKKVNSGLRVQGTNSRYKTLLKHLQNFALVKYGYTDITFNDLTSEFVQDFDYYLRNDLSIGHNTIWVYMIGFTTLCRLAMSRKHLAFNPFSEYKNTKKDKDRGYLLRNELEQLVTFNCEKKKDELVKDLFVFSCFTGLSYSDIKGLKNSNIQEFFDGNQWIIVRRRKTATSSNVMLLDIPKIIIEKYAGLSKDDRVFPVPSNSFCNDRLKVISQQIDCLKEKKVTFHLARHTFATLFLSEGVPLESLSKMLGHKNIATTQIYAKILNEKVGKDMQKVSHKFKGLERSFVAQL
>NZ_CP013690.1|WP_036496715.1|4073026_4074040_-|DUF1016-family-protein
MLINQSIITDIKAIIAQSKDKAIRAVDHQRTLMYWHIGKRIFEEEQEGKERADYGTFLIKYLSEQLQPEFGSGFSTRQINLYRQFYRTFENVHTLYAQLSWSQYKLLLSVDSQDKREFYIAETIKNNWTVRQLERQIYSSLYERLLLSNDKESVLAVAKNEKQPSDAKEIIKDPMYLEFLGLKRETSYYERDLESAIITHLQEFLLELGNGFSFVARQKRIHIEGDEFFVDLVFYNRILQCFVIIEIKTTKLTHQDIGQLQMYVNYYDRIEKLPYENPTIGILLCANKNDAVVKFTLPENQKQIIASQYELYLPSEQQLLEEVNKELESFEEREDKK
>NZ_CP013690.1|WP_006258106.1|4071827_4072577_-|HipA-domain-containing-protein
MTNEIESGHYILKPISDLPKNREFAPANEHLTMQIAKQIFKIKTAENVLIFFEDGSPGYLTKRFDYDGNGNKLAIEDFASLLGKSPATDGEQYKYEANYLELFDALKRYVPAWKVEAPKLFTLIVFNYLFSNGEAHLKNFSLIETQQGDFKLSPAYDLLNTKIHIHNADFALKEAILPKSISKGKIIDQLMVLGAKAGITEKLIAKVLQNLTSKEEQVVDLIERSFLSEKLKRNYLQDYQRRLKKLRND
>NZ_CP013690.1|WP_006258107.1|4071497_4071635_+|hypothetical-protein
MIIDKTRNKFKEITTPVFLFFDPKQEYREEVLAINEPDFKVEFTL
>NZ_CP013690.1|WP_006261442.1|4069886_4070234_+|helix-turn-helix-transcriptional-regulator
MNDIIDITALSDKAILQKLGFFIQQTRIKENLTQEDLAQQAAISRTTLSLLERGENISLINLIKILRILNALYVLNSFDVLEELSPIELAKGEKQKRQRASKAPNQQQDNSDLGW
>NZ_CP013690.1|WP_006258112.1|4068063_4069233_-|ATP-binding-protein
MERLFEYSNKLINEANTDFFRYIYNQINWENRMIGLIGPRGVGKTTLVLQYIKQNLSPTETLYITAEDFYFVDNKIIELVDTFVKFGGKYLFIDEIHKYPDWAKDLKLIYDYHKNLKVVFTGSSVLDIKKGASDLSRRAIIYNMQGLSFREYLKLFHNISAKTYTLQEVLQHKVNIPEIERPLLYYTDYLKKGYYPFALEQDFDIRLAQIINQTLENDIPMYANMNVATGRKLKQLLAIVSQSAPFKPNMSKIAEMLSVSRNNIADYCLYIEEAGLITQLRNNTGGIRGLGKVDKIYLDNTNLIYNLASDSSNIGNIRETFFLNQTRVKHNVISSADSDFLIENITFEIGGKNKSQKQIKNIENSYVVKDDIETGFLNVIPLWQFGLLY
>NZ_CP013690.1|WP_059051141.1|4067269_4067554_+|hypothetical-protein
MTKGSQREIKVGNRKINFKRTVPKNLMIKDDLLHLVVQAFKEKGQREITDSFLNAIKLAVDKIDQQVVESQLKFAPVWIQKEIKKLYYKQEYVD
>NZ_CP013690.1|WP_002992043.1|4066441_4066645_-|helix-turn-helix-transcriptional-regulator
MDSIQVFVKQKRKELKLTQEDLALNAGVGLRFVRDLEQGKKTLRLDKVNDVLALFGKEVGVIDQTRE
>NZ_CP013690.1|WP_058699846.1|4066106_4066442_-|HipA-N-terminal-domain-containing-protein
MARQAKIYFQDQLAGYLLEGDDGYSFYYNQDYLRTPHPHPISLTLPLSEETYHSNVLFPFFDGLIPEGWLLDIGERHWKLNPRDRFELLINLCRDTIGAVSIYPMEAANHE
>NZ_CP013690.1|WP_058699845.1|4065187_4066114_-|HipA-domain-containing-protein
MNNCLFCYKPVETGDYHPTCSKKFFDTTKVPILELDKEKLDKLAQITVNERLALTGVQPKISLSLNSENGSKRLTLVSLWGDYILKPQSPNFAFMLQVEDLTMHLAKLFKIETAQHALIRTSTGELAYITKRFDRVKNKKIHVEDLCQLSELLTEQKYKSSYERVGKIIKRYATNSGLDTIKYFRLVLFSFITGNNDMHLKNFSLMHTDKGILFSPAYDLLNLNLVFPDEKEDLALTLSGRKKKIKQVNFDELAMSLGITAIVRNNIYKDFSKQANKVYDLIDRSFLTDEYKEEYKTIFTKKLKQIGL
>NZ_CP013690.1|WP_006261438.1|4077434_4078316_-|helix-turn-helix-domain-containing-protein
MNKLPLEPFLHRFNNRLYINCKDVNKLVQIRNQHLFYPHKLTFFCIHLFLEGQGTYYLDSVSIDVAPKRVLIVSKNQVEQYCQPINYKSEILMFTEEFFCIDELHFQFFYNTKLFDLTDHLQSIDISGQYEELTLLFTLIKKELNKSFYPKQQYILNNYLFNTLLILENAIDKSTTQQLNISHDKLIVSNFKHLVNNKIDKSMTVKMYASELKLSVRSIEYAFKKTDNITPYAWVSERMIMEIKRLLLYKDLHINEISFKLKFKEANHLTVFFKRKTGLTPLQFRNKYKENGD
>NZ_CP013690.1|WP_006258101.1|4079074_4079290_+|hypothetical-protein
MLYNSYFIDHKNKQEVSISQRTFKYTKKVWKASELVYEQTGCESLISIEQEKQRLKQVYNTNSVFADITYS
>NZ_CP013690.1|WP_058699847.1|4079391_4080243_-|RteC-domain-containing-protein
MNQTTTTKNALSQIIKKEAELGALESVSISSTLEMIEFLKAVLKQIKKQVLVYGFTSQEQEIDFFKNIKPLILGKLIFYNKLYGFKCESPSDIVSAKIYFQEKLKQLHSEYKKYHLYSDIYKYYKTKASHRDIEYFTTGHINKTHLVNSFSFEINPKFSTFYDYKIARIITYELLSAYLNNKTTSYNSLIGTATQNAITWSESNSALIELIYALYVTKSVNHGKVKIKKLSKALGQVFQINISDNIHHTFHRMKTRSYSRTMFLDKLKQSLEDYMDQDQPYKG
>NZ_CP013690.1|WP_058699848.1|4080438_4080750_+|hypothetical-protein
MKISNQSGQVITKQKAIEYITEFKAQYPDAINSYYLGIDKLQALLSQTNCIGMRIYPGLNKQTALTNMVLVGVDQKGQDISDGIILEELITCPPACSYDNTLG
>NZ_CP013690.1|WP_058700052.1|4080769_4081396_+|hypothetical-protein
MGVIVLTLLFGIIPFCLYLYKRQKGINCDKAYLGIVLLFFIASLYETIASLILKINVLVWFQVYSLLEFIALFYLFINLLNRKPKAYFYLSLGLFVIVYLFSLRFLTNHHFLVSKTINKVFVMIFVIVSSFIVINQNFIQKTSLRLFKRADFYMVIGLFVYYSVTIPLFVLCSYRVDNKLYFLDYWLINILGSLTLRIVISIGIWKIK
>NZ_CP013690.1|WP_058699849.1|4081380_4082166_+|sensor-histidine-kinase
MENKITLIFWLATISATALCGVVIAIVILYQKNLKEYQIKLLNNRLSIILEAEHKERARISRELHDGVCNELACVLSYLQIIKLYQDKKTKKDALKQIKKITLNTYSQLQELSYHLSPPYIEDNPLESILSDYINRINKTSSIEFSYHYEPVSFELDQNVKLIFYRVVQELIQNIIKHSGASKVSLRLLWDKGKFILLISDNGIGYDSDIKSDNAKKGIGLSNIHARLKQINADFRHIREENSNAIGIYYAKQNNKSSNSG
>NZ_CP013690.1|WP_058700053.1|4082158_4082809_+|response-regulator-transcription-factor
MDDHTVFRDGFELIISRISSVEVVLKSSNGLKLLQGLKTVEVDIVFLDIQMPKMDGYQTVAELNKIYPSLKVIILSSFYDHHSIARMLKFNISGYLSKKAKSKDIEKAILTVNKSLEYFGKRVRKVLIKLSFDIENTTCVFSQRELEIITLSARQLSSSEIADILHISCRTVEKHKEGLLEKTGSYNFTGVVLYAISMHYIKKQDFINSYKTSKRK
>NZ_CP013690.1|WP_131540958.1|4082966_4083683_+|ISL3-family-transposase
MEICVAKQTKPTTPYTKYSKLPSSKLHSYYIRKIVDLPIFGKQTLIKLKARKFYCSTLECPLKIFTERFKSIFSSYQRRSDRLTKKLLNLVILTGGRPIEKICAEFSVTISDTSLLRIIAKQELPTTTNVTHLGVDDWAIRKRERYGSILIDLNTNKPIGLLKDREENTFYHWLTQNKQVQLISRDRFINYQRASTQGAPQALQVADRWHLLKNLGETVRKILDREYAVIQKMRKKIL
>NZ_CP013690.1|WP_006258094.1|4083679_4084084_+|hypothetical-protein
MTIQPENKRQKTKTSNHQLQRFTQVKELLAQSKSHREISKLLHMSRVTVKKYELYDELPTIHCQSSTGIEKHLEYIESRIIQEPTILLKTLHFELKNRGYTGAYNTLSDSLKRFQISIGKAARNKVILPSNLVF
>NZ_CP013690.1|WP_157159100.1|4084111_4084480_+|transposase
MTKKERINKAQKHILDQFYELSPTLRFTLEVVREFRCMMFEQKCSDYFYTWIDKINLSGIPEFQSFSKGLLKDTNAIKNAIDLPWSNGPVEGNVNKLKTLKRQMYGRCSIDLLEKRLVLSID

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Crispr_ID: NZ_CP013690_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013690_9

4175953-4176659

TypeVI-B2,TypeVI-B1

Consensus_repeat	Method
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	CRISPRCasFinder
GTTGGTACTGTACACGTNTTTGGTGTGCAATCACAAC	CRT
TTTGGTGTGCAATCACAA	PILER-CR

10 spacers

cas13b,Csx27

The CRISPR arrays of NZ_CP013690_9

>merge|NZ_CP013690|9|4175953-4176659|CRISPRCasFinder,CRT,PILER-CR
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAACCATTTGTAAGTAAATAAATCATAAGCATTCGTTGGTACTGTACACGTTTTTGGTGTGCAATCACAACCATTTGTAAGTAAATAAATCATAAGCATTCGTTGGTACTGTACACGTTTTTGGTGTGCAATCACAACTTGTTGTTAAGTTACGTAAAAAATCAAATAGTTGGTACTGTACACGTTTTTGGTGTGCAATCACAACACTCTGAATGCGCCTAACTGTGACGCTGTGGTTGGTACTGTACACGTTTTTGGTGTGCAATCACAACTTGCGTTTCTAAATTCCATGATCTTAAATTGTTGGTACTGTACATAGATTTGGTGTGCAATCACAATGTTTTATTAGTAGTATTACTATATACCAAGGTTGGTACTGTACACGTTTTTGGTGTGCAATCACAATCGCTTGCATCCTTTTTAACCCCGTCCGTAAGTTGGTACTGTACATAGATTTGGTGTGCAATCACAACGCTATATCTTCATTTGTGCCTTCTTCTAACGTTGGTACTGTACATAGATTTGGTGTGCAATCACAACTAGTAACCCATTCTTCTGCTTTAGTCCAATGTTGGTACTGTACACGTATTTGGTGTGTAATCACAACATTAACAAGTTCTATCTGATCGATGAATACGTTGGTACTGTACACGTATCTGGTGTGCAATCACAAC

>NZ_CP013690|9|9|4175953-4176659|CRISPRCasFinder
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	CATTTGTAAGTAAATAAATCATAAGCATTC
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	CATTTGTAAGTAAATAAATCATAAGCATTC
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	TTGTTGTTAAGTTACGTAAAAAATCAAATA
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	ACTCTGAATGCGCCTAACTGTGACGCTGTG
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	TTGCGTTTCTAAATTCCATGATCTTAAATT
GTTGGTACTGTACATAGATTTGGTGTGCAATCACAAT	GTTTTATTAGTAGTATTACTATATACCAAG
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAT	CGCTTGCATCCTTTTTAACCCCGTCCGTAA
GTTGGTACTGTACATAGATTTGGTGTGCAATCACAAC	GCTATATCTTCATTTGTGCCTTCTTCTAAC
GTTGGTACTGTACATAGATTTGGTGTGCAATCACAAC	TAGTAACCCATTCTTCTGCTTTAGTCCAAT
GTTGGTACTGTACACGTATTTGGTGTGTAATCACAAC	ATTAACAAGTTCTATCTGATCGATGAATAC
GTTGGTACTGTACACGTATCTGGTGTGCAATCACAAC

>NZ_CP013690|9|3|4175953-4176659|CRT
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	CATTTGTAAGTAAATAAATCATAAGCATTC
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	CATTTGTAAGTAAATAAATCATAAGCATTC
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	TTGTTGTTAAGTTACGTAAAAAATCAAATA
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	ACTCTGAATGCGCCTAACTGTGACGCTGTG
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC	TTGCGTTTCTAAATTCCATGATCTTAAATT
GTTGGTACTGTACATAGATTTGGTGTGCAATCACAAT	GTTTTATTAGTAGTATTACTATATACCAAG
GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAT	CGCTTGCATCCTTTTTAACCCCGTCCGTAA
GTTGGTACTGTACATAGATTTGGTGTGCAATCACAAC	GCTATATCTTCATTTGTGCCTTCTTCTAAC
GTTGGTACTGTACATAGATTTGGTGTGCAATCACAAC	TAGTAACCCATTCTTCTGCTTTAGTCCAAT
GTTGGTACTGTACACGTATTTGGTGTGTAATCACAAC	ATTAACAAGTTCTATCTGATCGATGAATAC
GTTGGTACTGTACACGTATCTGGTGTGCAATCACAAC

>NZ_CP013690|9|4|4176105-4176658|PILER-CR
TTTGGTGTGCAATCACAA	CTTGTTGTTAAGTTACGTAAAAAATCAAATAGTTGGTACTGTACACGTT
TTTGGTGTGCAATCACAA	CACTCTGAATGCGCCTAACTGTGACGCTGTGGTTGGTACTGTACACGTT
TTTGGTGTGCAATCACAA	CTTGCGTTTCTAAATTCCATGATCTTAAATTGTTGGTACTGTACATAGA
TTTGGTGTGCAATCACAA	TGTTTTATTAGTAGTATTACTATATACCAAGGTTGGTACTGTACACGTT
TTTGGTGTGCAATCACAA	TCGCTTGCATCCTTTTTAACCCCGTCCGTAAGTTGGTACTGTACATAGA
TTTGGTGTGCAATCACAA	CGCTATATCTTCATTTGTGCCTTCTTCTAACGTTGGTACTGTACATAGA
TTTGGTGTGCAATCACAA	CTAGTAACCCATTCTTCTGCTTTAGTCCAATGTTGGTACTGTACACGTA
TTTGGTGTGTAATCACAA	CATTAACAAGTTCTATCTGATCGATGAATACGTTGGTACTGTACACGTA
TCTGGTGTGCAATCACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013690.1\|WP_058699900.1\|4179683_4180802_-\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP013690.1\|WP_058699894.1\|4159016_4160105_+\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379135
NZ_CP013690.1\|WP_006259958.1\|4177541_4179122_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129794
NZ_CP013690.1\|WP_058699896.1\|4160906_4161494_-\|DUF3347-domain-containing-protein	unknown	unknown	gnl\|CDD\|378730
NZ_CP013690.1\|WP_058699907.1\|4190350_4191589_+\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_CP013690.1\|WP_058699898.1\|4163332_4164811_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|367035
NZ_CP013690.1\|WP_006259953.1\|4169390_4169819_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_039851757.1\|4179171_4179546_-\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|274132
NZ_CP013690.1\|WP_058699903.1\|4183495_4184044_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274376
NZ_CP013690.1\|WP_058699901.1\|4180980_4182300_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP013690.1\|WP_058699899.1\|4165220_4169036_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226220
NZ_CP013690.1\|WP_058699895.1\|4160395_4160845_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013690.1\|WP_058699904.1\|4184309_4185230_+\|FecR-family-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP013690.1\|WP_058699893.1\|4156155_4159005_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273804
NZ_CP013690.1\|WP_058699906.1\|4188653_4190330_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
NZ_CP013690.1\|WP_006261415.1\|4171662_4172343_+\|hypothetical-protein	Csx27	-	unknown
NZ_CP013690.1\|WP_058699897.1\|4161745_4163329_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|379862
NZ_CP013690.1\|WP_058699905.1\|4185226_4188643_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
NZ_CP013690.1\|WP_058699902.1\|4182415_4183258_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_CP013690.1\|WP_058700060.1\|4172356_4175836_+\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380476

Protein	Function_ID	Function_description	E-value
NZ_CP013690.1\|WP_058699894.1\|4159016_4160105_+\|tyrosine-protein-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	1.39219e-84
NZ_CP013690.1\|WP_058699900.1\|4179683_4180802_-\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	7.72026e-63
NZ_CP013690.1\|WP_058699896.1\|4160906_4161494_-\|DUF3347-domain-containing-protein	gnl\|CDD\|378730	pfam11827, DUF3347, Protein of unknown function (DUF3347). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 169 to 570 amino acids in length.	4.76177e-47
NZ_CP013690.1\|WP_058699907.1\|4190350_4191589_+\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	1.62015e-17
NZ_CP013690.1\|WP_058699898.1\|4163332_4164811_-\|TolC-family-protein	gnl\|CDD\|367035	pfam02321, OEP, Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.	1.94436e-12
NZ_CP013690.1\|WP_006259958.1\|4177541_4179122_-\|hypothetical-protein	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.74944e-10
NZ_CP013690.1\|WP_039851757.1\|4179171_4179546_-\|four-helix-bundle-protein	gnl\|CDD\|274132	TIGR02436, S23_ribosomal_protein, four helix bundle protein. This family describes a protein of unknown function whose structure is a bundle of four long alpha helices. Some of the first members of this family were found encoded in the (atypically large) intervening sequence (IVS) of Leptospira 23S RNA, a region often present in the rRNA gene and removed during rRNA processing without re-ligation. However, this location is not conserved, and naming this protein as a 23S RNA protein is both confusing and inaccurate.	8.28686e-32
NZ_CP013690.1\|WP_058699903.1\|4183495_4184044_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	5.88583e-33
NZ_CP013690.1\|WP_058699901.1\|4180980_4182300_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.14133e-35
NZ_CP013690.1\|WP_058699899.1\|4165220_4169036_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	1.08753e-158
NZ_CP013690.1\|WP_058699904.1\|4184309_4185230_+\|FecR-family-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	1.89032e-21
NZ_CP013690.1\|WP_058699893.1\|4156155_4159005_+\|TonB-dependent-receptor	gnl\|CDD\|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	1.28322e-135
NZ_CP013690.1\|WP_058699906.1\|4188653_4190330_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	2.63384e-37
NZ_CP013690.1\|WP_058699897.1\|4161745_4163329_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|379862	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion. HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.	3.0273e-91
NZ_CP013690.1\|WP_058699905.1\|4185226_4188643_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP013690.1\|WP_058699902.1\|4182415_4183258_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	4.34277e-15
NZ_CP013690.1\|WP_058700060.1\|4172356_4175836_+\|hypothetical-protein	gnl\|CDD\|380476	cd20478, Cas13b_Bz-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Bergeyella zoohelcum and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0

>NZ_CP013690.1|WP_058700060.1|4172356_4175836_+|hypothetical-protein
MKDILTTDTTEKQNRFYSHKIADKYFFGGYFNLASNNIYEVFEEVNKRNTFGKLAKRDNGNLKNYIIHVFKDELSISDFEKRVAIFASYFPILETVDKKSIKERNRTIDLTLSQRIRQFREMLISLVTAVDQLRNFYTHYHHSDIVIENKVLDFLNSSFVSTALHVKDKYLKTDKTKEFLKETIAAELDILIEAYKKKQIEKKNTRFKANKREDILNAIYNEAFWSFINDKDKDKDKETVVAKGADAYFEKNHHKSNDPDFALNISEKGIVYLLSFFLTNKEMDSLKANLTGFKGKVDRESGNSIKYMATQRIYSFHTYRGLKQKIRTSEEGVKETLLMQMIDELSKVPNVVYQHLSTTQQNSFIEDWNEYYKDYEDDVETDDLSRVTHPVIRKRYEDRFNYFAIRFLDEFFDFPTLRFQVHLGDYVHDRRTKQLGKVESDRIIKEKVTVFARLKDINSAKASYFHSLEEQDKEELDNKWTLFPNPSYDFPKEHTLQHQGEQKNAGKIGIYVKLRDTQYKEKAALEEARKSLNPKERSATKASKYDIITQIIEANDNVKSEKPLVFTGQPIAYLSMNDIHSMLFSLLTDNAELKKTPEEVEAKLIDQIGKQINEILSKDTDTKILKKYKDNDLKETDTDKITRDLARDKEEIEKLILEQKQRADDYNYTSSTKFNIDKSRKRKHLLFNAEKGKIGVWLANDIKRFMFKESKSKWKGYQHIELQKLFAYFDTSKSDLELILSNMVMVKDYPIELIDLVKKSRTLVDFLNKYLEARLEYIENVITRVKNSIGTPQFKTVRKECFTFLKKSNYTVVSLDKQVERILSMPLFIERGFMDDKPTMLEGKSYKQHKEKFADWFVHYKENSNYQNFYDTEVYEITTEDKREKAKVTKKIKQQQKNDVFTLMMVNYMLEEVLKLSSNDRLSLNELYQTKEERIVNKQVAKDTQERNKNYIWNKVVDLQLCDGLVHIDNVKLKDIGNFRKYENDSRVKEFLTYQSDIVWSAYLSNEVDSNKLYVIERQLDNYESIRSKELLKEVQEIECSVYNQVANKESLKQSGNENFKQYVLQGLLPIGMDVREMLILSTDVKFKKEEIIQLGQAGEVEQDLYSLIYIRNKFAHNQLPIKEFFDFCENNYRSISDNEYYAEYYMEIFRSIKEKYAN
>NZ_CP013690.1|WP_006261415.1|4171662_4172343_+|hypothetical-protein
MDKLSLYELFSFVIPGGIALHLLNWCSVNVLSTGTLFNLSDLSNSLIALVFALLIGVTLHIITFNILLKCGSYRQIIYKSVQEIKLDDYIQQVIPFLNQEYFHNKKHEVAANTNNAVPAENLFDYAYYYLEVNGKNAQAKNFQSLYFFFRNMFTLGIVSIVILIIALVYSTITSVGKDVLSEIVFKIAFFAVIIGIAVPVANWLRKKMIITVFGCYYADRVHQTNK
>NZ_CP013690.1|WP_006259953.1|4169390_4169819_-|hypothetical-protein
MKKHLSILFLFLSFLVTASPIIEWSCTEEVMTCGMEISNDGGMSCCGGDMEQGSRSMDMNMPCCTVASRVLVTIAELKVQTPKVVQDTKAKTANIKSQWFNSNYLEDLKSIDLVSVSPLSVSVSGFKYKDIDPLSYICIYRI
>NZ_CP013690.1|WP_058699899.1|4165220_4169036_-|efflux-RND-transporter-permease-subunit
MLNKIIKYFLHNRVITLLLLVVVIVWGLITAPFNWHQNMLPSDPVPVDAIPDIGENQQIVATEWMGRSPKDIQEQITYPLTTSLLGIPGVKTVRSSSMFGMSFIYIIFEENVEFYWSRSRILEKLNSLPAGTLPEGVIPSLGPDATALGQVYWYTLEGRNPETGEPTGGWDPDELRTVQDFYTKYNLSAAEGVSEVASIGGYVKEYQVEVNPDAMRAYNVSVMDVMSAIQKSNLDIGAETIEINKAEYLVRGLGYIKNVKDLEDAVVTVRNNVPVKIKDVAFVNLGPATRRGGLDKEGIEAVGGVVVARYGANPMHVISNVKAKIKEMEAGLPQKTLADGTISKVTVVPFYDRSGLIQETIGTLETALAHEILICIIVVIVLVINLRASVIISSILPIGVLATFIIMKYMGIEANIVALSGIAIAIGVMVDVGVVFVESIIRYMEEEKAQGIQSKGIAFVNLITKAVSEVSGALSTAMLTTIISFLPVFAMEAQEGKLFKPLAYTKTFALLSAFILGIIVLPTIAYYVYSIKIDKQKVRKIANYILAVVGIGLWIYTGEFIAVTLTLVAINNLFTPGWKTDTIANYINVALTLLVALYYLTVEWLPLGTQQSTGLNFVFVLLAIGSILGVLWLLVIYYEQILRWALTHRWKFMSIPILTLVFGMLVWLGADKSFGFVAKGFETVGWKSFRETAFWQKSTETFPGIGQEFMPSLNEGSFLLMPTSMPHTGIEQNLQFIGTLDRRISNIPEVELTVGKWGRVNSALDPAPTQMFENTINYRSEYILDDNGHRQRFKVNKKGEFELINGTTYNVEDGFRLIPRDSLIIDKDGKFFRQWRPEIKKADDIWQEIVNVSHLPGLTSAPKLQPIEARLVMLSTGMRAPMGLKVSGPDLESIEAGGKALETALKDIPSIMPSTVFYDRAVGAPYVEIHLNRHNMARYGITVSDLQDVIGAAIGGMALTTTVEGRERFPVRLRYPRELRDNPEELAKMLIPTATGAQIPLSEVADIEYAKGSQMIQSENTFLLGYVIFDKIEGKAEVDVVHEADKLLQAKLASGELTLPKGVTYKFAGNYEQQERASQRLLYIVPLSLLAILLILYFQFKTIAASLIHFSGVFVAFAGGFILLWLYGQPWFMNFSVGDMNMRDLFQMHNINLSIAVWVGFIALFGLATNDGVLMGTYIHDTFEARDPKTKEEIREAVVYAGLKRVRPAAMTTATALIALLPVMTSTGKGAEIMVPMAIPTFGGMLIQSMTMFVVPVFQCWWREWAIKRSA
>NZ_CP013690.1|WP_058699898.1|4163332_4164811_-|TolC-family-protein
MNKNKTYIYLASAFLAVTSFTATAVAQQQPKDSLSSYLNVAIENNPGIKAQKFAHEAFLQKIPQAGAFQDPELSMDFYTEPMDIVGGRSIGNVSIMQMLPWFGTRKSARIEAGHMANMQNEQYKEVVDNITLQVHTQWYAMQKLNEQLRNNEENKKLLQQLEQLALRKFSAPSNTAKPSATPQVNTKTASTPSASASAGMGSMSMGGGATASSAPAMSSSMGSGGGMSEMGSSSASGMSDVLRIGLELIEIENNIESLHSQLKAEKAKFNALLNREANHEVVLGEIEKTSFIYGEQDALLAIEANNPMLSMITEEGLAYKAKAEMDKKMSYPMIGLGLQYMVIGKTNDKMLAMGDMNGKDMIMPMVTVSLPIFRKKYKAQQEEGKLWWKSSDQKFEDTYNTLKSEYYGYKSQLDDAERIVTLYEKQTTLAETTYNLIIKEFVTGKSDLTNVIQVQRQLLDYQLKKAEAIANYNTMVASIKKLLAIRDNTQNI
>NZ_CP013690.1|WP_058699897.1|4161745_4163329_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MDKIRNIFKNNIVRYSAILLVGLLLGWMVFGGAGSHQHNTEPATTEEGNTVWTCSMHPQIKMDKPGKCPLCAMDLIPLKSSDGGDDAIDDQAIQMSKEAVALANIQTTVVGHQDAVKDIQLYGTIQVDERLQQSQTSHVNGRIEKLYVNFTGEAVKQGQLIATIYSPDLLTAQQELLEAAKLKDLQPLLLDAAKEKLRIWKMSEAQINKVLSTENVSPYVSVHANTSGIVVAKNVNQGDYISQGTVLYNISNLSKLWAVFDAYENDLPFIKEGDVLEYTLQSLPGEVFKGKIAFINPIIDATSRTAKVRVETDNRNNNLKPEMYASAKISAPLKQYNKEMVIPKSSVLWTGKRSVIYVKQPNTATPAFKLREIVLGPSLGENYVVMSGLENGEEIVTNGVFTVDASAQLEGKRSMMNNDNAPAATGHEGHANHGTTASANLEHAMLKVKGNCDLCKERIETAAKKVKGVSTASWDVKEKVLHLNFDKKLTSKAAISKAVAKVGHDTELDKATDADYKALHSCCQFER
>NZ_CP013690.1|WP_058699896.1|4160906_4161494_-|DUF3347-domain-containing-protein
MKKVILSFAVLAFTLTACNDKKQETTAPTTEEHTGHDHDDHTTASAAEKVTTVNESNVLQSTLDAYFLVKKALQEDNQAEAATASKTLVTNLNAVVTEDATAKELVKELVETATKIDAADIKVQREEFEDLTEDLVKLINTVGTDRVVFEQYCPMYNNGEGGQWLSDVEDLSNPLYGSSMLKCGANQNKITFETK
>NZ_CP013690.1|WP_058699895.1|4160395_4160845_+|hypothetical-protein
MRKLMVLFVVVIVSLSCSSDNNEVNESEIVDGISTSIKIQTPKWLQGNWRISGGGTSPFVPGFSISSNELCFISLTTECFQEIINQAYRTNPDAVKVEQEYKEGLQQGYYRLSIYLNNTTTEFIFTEKSNSEVRYTMGNVKGTLFKVYE
>NZ_CP013690.1|WP_058699894.1|4159016_4160105_+|tyrosine-protein-phosphatase
MTRFKNVFTVVTVVAVLSATKGYTQEYKRTLTEEILVSGTKDKVQISFAEKGNYTIYSGTSKQTIDWGKPIHLKSQQMYEVDKDSRRPYYAVVSSVQDTIYVAERKIPFDKVHNFRDIGGIKTKDGRVVNWGRFYRADALATIQDSEFDLFNDLGITKVFDLRGTHEVEKAPNNQPKQVKYIHVPVFNEVNAEYFKEIERKFMSGDFSLEDADQMLLDANRDFASLYTDKFKDLVHQILEEDTPIVYHCSAGKDRTGFTSALLLSILNVDRATILDEYEMTNFYTQHTIEDNIEKMSKLMPGVKKINKEAFRSMMGVKKEFLQMAFDTIDQKYGGMDNYIKNQLGISDQERKALIKRYTYKM
>NZ_CP013690.1|WP_058699893.1|4156155_4159005_+|TonB-dependent-receptor
MKQIYTLMFVAVTMIAQAQNKGRIYGSVADDYGNLPGAIVRIDALSIGTSTDLQGTFNFTNLPAGDYTLAFSYIGHQEITKTVTIVEGQAMNLGQVMFLNEGKDNELEGIVITSYQAPSQAKAFSIQKNAAGIMNVIATDNIGKLPDRNAAEAVQRISGVSLEKDHGEGRYVSVRGTPLQWNSTLINGTRMPTSEGTSDGSSGTRTSPLDVFPSEMIEYIQLSKAITPDIEGDAIGGSVNFITKTAPTKQTLQVSAGGGYNDQARKGSYTGSFLYGDKVADGKIGFVLGGSYWKRNWGTDNLEMTYDIEDKSIDNLQLRDYNGVRRTAGLNGGFEYQINDNHKLYARGIYTDFQDDERAIEGTYEFAKGSYMQRTRRGVTGISLYGAELGGAHESHNGMWKLDWKGGGYATDMETRNPSGSKAKNKAYQMAFFESDVNYTNLAPDGKMYLDIDAPQGYIGASYKHLKPTTTQEIHPNMLGLDMLYAMQTQSYERDWLGEFNLEYKPSEKVKIKAGGKFKTKYLERGAPFSIYSYTGKDPLYMGSLDLQSFPHNGGFLTELRDTYKTMVQPGITFNQLDRLFTKENLNNGSYYPMVMDAQNPSSAASFYNGTEDVYAGYVMGDVAVSDKFSIIGGLRYERTQLTYRGNKVIEKEDGTKAVESNKSSNGYNALLPMIHFKYQVQDNMNLRMAYTRTFARANFSDLNPTESVSMITTPYSISRGNINLKPTFSNNIDLLGEYFFDDIGIVNAGVFYKALENVIYSSQRYTTLNNQLYKVIQPENSKKGWLAGMELGLSKRLTFLPGFWSGFGIDANYTYTHSEMDVPVYRAGENNETVESIEKQALPNQAKHLFNVALSYEKGKTAIRLAGNYKGKSLALIQGNPENYRWYDKNFTVDLSAQYKLTDRLTIYVELNNLTNEPMRYFHGQSNRPEQVEYYSFKGMMGINFNIL
>NZ_CP013690.1|WP_006259958.1|4177541_4179122_-|hypothetical-protein
MYNKGLFHSWVPKPVMLLLIVIIAAVFCSISGIYTTNITNIVGSTGSMTEYYLWANYAYAIGLGTVMPLIVRIKARFRTKELLVTSLTMCGLLYLVQSTTHQPYIIIASSYLIGVFKMMGMMEVVLPLMMLLSVGGNRGIFYSIYYSALLVITQLSGYFVAKVSFIFSWQISYMNLAIMCFGAALICIVFQHNQRFMRKVPFIYIDWISILLFNVTFMTLAYILAFGKQQAWFDSEIIRYASLLFGILLFIFVIRQQLIRRPFLPLNAFKKNNVRHGTIMLLCLGMYLATATIQNIFAVGILGYNPMTNASLNLLLIPGLITAAVVCYYWYKNEIPIRMLVFSGFSAFLMYSMMMYLAMATEFSYSMWYLPMFFKGYGMGVIFVTTWYYTLDKLDLASMLGLIGFAILWRTFIAVGMFSALYSWTQYQFQIQSLNNLAVYLDDAMLLRSGSGINLSLVQLNGILAATKTVYGYINIAGIGVLLYVLFHHYGRIRTLKTRVYINKLGNLMMSKKDKESIENQLPNNI
>NZ_CP013690.1|WP_039851757.1|4179171_4179546_-|four-helix-bundle-protein
MKNENIVQIKSYAFAIRMVNTYKHLTTTKKEFILSKQLLRSGTSIGANIEEAIGGQSDKDFYAKLYIAYKEARESHYWIRLLTDTDYLTTKQSTSLLADIDELLKIIGSILKTIKENEKIINHT
>NZ_CP013690.1|WP_058699900.1|4179683_4180802_-|HlyD-family-secretion-protein
MEKKENTTTEQPVQAPVEQVVEDKAKKEKKKKTKILLVNTLTFAVIGIAFFWLLTKYFHINDRDYTESAQVEEFINPINTRVSAYIKEIKFIEHQQVKKGDTLVILDNREILTQVEQAEAAYLSALAAKKVTNSSIHTASNNIGVFSSNIEGAKARLWNAEQNNKRYENLLQAEAVTQQQYDQVKTEYQAAKSAYESLIKQQNTTKLSVSEIETRLALNEADIKRTKAMLDMAQLNLSYTVITAPYDGVMGRRLISEGQLLSPSQQITTIVKDNEKWVTANFLESQMNNIQIGSIIDMTADAVKGIRFQGKVTAISAATGSRYSSMPTDNSTGNFVKVQQRIPVRIEFTDTNDIENIANLKAGMNMNIQLAN
>NZ_CP013690.1|WP_058699901.1|4180980_4182300_-|TolC-family-protein
MKRNIHKYFCGLGLLLLSYTSIYSQVSDQTLSIEQAVNLAMQNHQQLKVSALNKNISQQQTQLIKQQRLPNLAFTANASYIGDALILDRDFSKVMTKDMPHFGNSYAIQASELLYKGGAINKNIELAEIGEQLASLDLVQDQQSIKFLVISNYLDVYKLIHQEQVYQNNKKLAQIRLENVNRYYKEGMMTRNEVIRGELVLQNMDQALLSVDNNLSILNYNLAIALGLPTSTKITPNEALVHRPLEGDYNYYLDLAYTQHPMIQRVEKGVEAAQKKIEIANTDKYPALAAVGGYNMSRPITTSNPVMDMYSNAWQVGVSLTYNIDNLYKTPKKVKLEKLQKNKAEESLTLVQQQLEMGVNAAYTKYDEAIQNANLLKKSQQLAQENYKIIEAKYLNQLAIQAEMTDATNAKLEAELQYANAEINVLYQYYNLLKSTGTL
>NZ_CP013690.1|WP_058699902.1|4182415_4183258_-|AraC-family-transcriptional-regulator
MLQGNIQTANSSFIHVQIYDQQNIFDHANFGHPYRPTRSSFLFVKKGRLRIREQINEFEIIENSIFLIDVKYVYEILEISPDAELRLLSYDRNFLETASFKLHRLKVYRDLKTQLQRNFHISKQELEMFWTNVESLGYYLEHFKEIEYGQYIIENYFNIILYHLVSVATPRSEDSINQMTSQQKITYKFVMLVSDYYLETKSVQFYADKLQLSIRHLSTVVKETSGKTPLEIINEFIFNEAKAQLSTTTLPIKQLATKLQFSDQYAFAHFFKKHQGISPT
>NZ_CP013690.1|WP_058699903.1|4183495_4184044_+|sigma-70-family-RNA-polymerase-sigma-factor
MALSRDQWVDINYYKYWDILYYLSCNITRDKDLSADIVQDVFVNIWNNYSNLIIDNSKAYLIQSVRNKSLKAISTTNFNTVQLKEVYNVLVDNEILSKEEEIMFKEQLVNMIYSKAQEVLPEKCYQIFVLRYSNKLSYKEIALKLGISESTVDNQINKALKSIKSSLPYLVDYIIVIGYLIG
>NZ_CP013690.1|WP_058699904.1|4184309_4185230_+|FecR-family-protein
MQNKFKHFLNKYLLGTSDLTEKKVVEDFSDNLQKRPLIELKIIQENSKLRSSIYNSIKYKTRERKRRKNYRLLSIGFSLLLVVGLTIYQKNISVNNQELTYSTSNELAKHIILPDGTAVTLSSNSTLIVSNEFNQSNREIKLLGEAYFQVAKDASRPFIISSDNFETQVLGTSFWVKRNIVEVSTGRVKVSNLLDRENYVILTAEQKALLKDHRLYKNTIDVFSCISSTSSYLMMNNITLTQWKQIIEKEFDIQIHFLEDIISTKEFIQADFRNSTLADIVQSVSYMYGFDYKYENKTIIINNTKK
>NZ_CP013690.1|WP_058699905.1|4185226_4188643_+|TonB-dependent-receptor
MRLNYYCRLRVETYLFCLSLLSTGVYATNQTISDKVGVHVYVSNSSETVKSLFEKIEAQTAYKVVYSPSTLDTSIALRFTSKERELEKLLEDIALRTGSTYNISDKFITFKSQYVIPKGDKVNTGQQNNKTVLKGVVKDIHGLALPGATVKIKESTEAVATDLDGSFMLEVVQNKPIILVIEYIGYDTKEIKVENPEYTSIVLEEDARSLEEIVITGYTTESKRNITAAISTINVDGIKDVPKADVAEMLQGRASGVQVMSDNSPGGGNSIRIRGFSTINNNEPLVIVDGVPVANGLNSINSNDIASMQVLKDAASSSIYGSRAANGVILITTKSGGRNEKISIDVSSFTGVQSAFNLPKMLDAQQYGDMLWQAYKNDGVAPKHDIYGNDPTGATIPLYLNKDKTIKSGNVDWVKEIFNPATIQSHNISLAKGGEHSSQLFSLGYFDQQGIIKDTYFKRFSGRFNSDYRFFDGILTIGENLNASYTENVGIGTNAALGSIVYNAFMYPSIVPVYNELGEFSGNPLNDIQNPRGRLDRNKNNKTKELRLLGNLFGELKLSDFTFRSSIGLDYVNINGRNFSPKFNEILVINPVNSLSTRNSFNYQFTFTNTLSYKKQLGNHNFDVLLGQEAVEYYYEGFSASRQNFMYEDPNYWFLDYGTANQLNGGNANGWSLNSFFGKVHYNYDGKYIVSATMRRDGTSRLANHKWDTFPAVSLGWRIDKEDFFDLGDTFTSFLLRGGWGVTGNQQVPSYSTIKSYSSNSYNSNYDINGGQSSVETGLIQSRVPNPELKWETTTQSSLGVDLGFFNDKLSVTADIYNKKTKDILVYKSLPLTYGGTNDGQWVNDGEMTNRGLELNLSYQDNIKDLHYNINFNFTTYKNQLTALNSVNYLGIPSSSLHSVNFGQEISRSAIGQPIGSFFGYVNDGIFKSQQQIDQYKLQPNAKPGDLIFRDVNNDGVIDDNDRTFIGSPHPDFILGFNVDLKYKGFDLSMFFNGSFGNKIYNLTKYNSHFFNQSAYNKSSDVLGAWTPDNPNASIPRLSLDDTNNNIRPSSYYVEDGSYFKLNNLQLGYSFGEKLHKKLKMRVYLQATNVFTITNYSGLTPEVGLQSYSKSNKNLDIGIDRGLYPPARTFSMGLSINY
>NZ_CP013690.1|WP_058699906.1|4188653_4190330_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKRYISNKTYKILFVTTIMAGVMSSCSKDFLDETTYGEVSPDKMTDPKNVERVIIGAYKMLNGQMDNASNAMNSPASNWSFGDVTSDDAYKGGGGTGDQGQIHRMELYQTDPTVIDIERKWSALYEGIKRVNDALRLLNQSVAFDPELKKQRQGELFFLRGHYYFELKKIYNRIPYIDEKVVNVEDYNRSNVEFTSEQLWQKIATDFDNASKVLPSKQAQIGRPTSIAAKAYLMKTMIYQKKWQEAYTISEEVMSSQYKLLSNFEDVFLPENDNSLEVIFAVQHSINDGDPNNYNGSIGDRLTAPGGPFYPQYGFHRPSQNLVNAFKTDANGLPVKDNVDVNSQDFVDPRLDYTIGRPGITYKGLGVTYDASWARDVATYGVYAPKKRIVSAKSPYYGATWPYVSALNYYIIRYAEVMLWKAEAAVELGKLEEARSIVNAIRKRAKESKYVMALDGKSYAANYKIGLYNDSWSNVNKAREAVQLESRLELAMEGERFFNLVRWGIADKVINQEYLEAEKHKRSFLTNAHFTKGKNEYFPIPQRYVDGATSKVEQNPNY
>NZ_CP013690.1|WP_058699907.1|4190350_4191589_+|YdcF-family-protein
MKKIVVGFLLAVCTFSFGQRGENKSVTLLRNSNFYFLDQLSKQPSLVKLLNDNKTFTEIKHNRLDLISKLVNGETFPKSEELVHSYIFTDDQIKSISDELVALNNKEKKVETFFEELKQSKKYINYNEMNQKDFISNVVKLNFSGLNHTLKVYGLGEKPFYPNIDSVSYDKNSRYFKRAILFWAKHLANESDYSKASFFEPMLDYGLYLMYMNHRDEGIRYEPLAELYNKSAIEYAKRIDFKKYEYNALIVLGDGPENYRDPLGALGKLNLKLAVEQYRQGKAPFIIVSGGHVHPNRTETCEAIEMKKELIGLYNIPEEVIIVEPYARHTTTNLRNATRLMIEYGFDIKQKSMIVSYELHTKSIADKKFLERFMRELGYLPGKIVKQKKGELLDFYPSELLLQINPLEPLDP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013690_8	8.1\|4077231\|26\|NZ_CP013690\|CRISPRCasFinder	4077231-4077256	26	NZ_CP045340	Vibrio sp. THAF190c plasmid pTHAF190c_b, complete sequence	215388-215413	5	0.808
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	NC_016565	Staphylococcus phage S24-1, complete genome	9084-9113	6	0.8
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	AB626962	Staphylococcus phage S24-1 DNA, complete genome	9084-9113	6	0.8
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	AY954949	Bacteriophage 66, complete genome	9111-9140	6	0.8
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	NC_007046	Staphylococcus phage 66, complete genome	9111-9140	6	0.8
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	NC_048107	Staphylococcus phage Pabna, complete genome	9210-9239	6	0.8
NZ_CP013690_9	9.6\|4176325\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176325-4176354	30	MT774409	CrAssphage cr131_1, complete genome	21898-21927	6	0.8
NZ_CP013690_9	9.8\|4176459\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176459-4176488	30	MH598802	Pelagibacter phage HTVC201P, complete genome	7917-7946	6	0.8
NZ_CP013690_9	9.1\|4175990\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4175990-4176019	30	MN855975	Siphoviridae sp. isolate 45, complete genome	5906-5935	7	0.767
NZ_CP013690_9	9.1\|4175990\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4175990-4176019	30	MN694483	Marine virus AFVG_250M1031, complete genome	14193-14222	7	0.767
NZ_CP013690_9	9.2\|4176057\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176057-4176086	30	MN855975	Siphoviridae sp. isolate 45, complete genome	5906-5935	7	0.767
NZ_CP013690_9	9.2\|4176057\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176057-4176086	30	MN694483	Marine virus AFVG_250M1031, complete genome	14193-14222	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	MF001367	Staphylococcus phage SA4, partial genome	6940-6969	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	MN150710	Staphylococcus phage vB_SauP-436A1, complete genome	8876-8905	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	MT926124	Staphylococcus phage vB_SauP_EBHT, complete genome	8537-8566	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	NC_031008	Staphylococcus phage SLPW, complete genome	8637-8666	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	KJ210330	Staphylococcus phage GRCS, complete genome	9183-9212	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	HF937074	Staphylococcus phage PSa3 complete sequence	8490-8519	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	NC_047788	Staphylococcus phage SCH1, complete genome	8876-8905	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	EU136189	Staphylococcus phage SAP-2, complete genome	8859-8888	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	KY000085	Staphylococcus phage SCH111, complete genome	8873-8902	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	AB626963	Staphylococcus phage S13' DNA, complete genome	9084-9113	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	MH107118	Staphylococcus phage CSA13, complete genome	8537-8566	7	0.767
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	MN098325	Staphylococcus phage Portland, complete genome	8828-8857	7	0.767
NZ_CP013690_9	9.8\|4176459\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176459-4176488	30	NZ_CP034112	Staphylococcus epidermidis strain CDC120 plasmid pSTA491, complete sequence	19964-19993	7	0.767
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	20835-20870	8	0.778
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	197643-197678	8	0.778
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	207417-207452	8	0.778
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	149947-149982	8	0.778
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	17439-17474	8	0.778
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	88987-89022	8	0.778
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	230548-230583	8	0.778
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	209623-209658	8	0.778
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	232201-232236	8	0.778
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	20835-20870	8	0.778
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	197643-197678	8	0.778
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	207417-207452	8	0.778
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	149947-149982	8	0.778
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	17439-17474	8	0.778
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	88987-89022	8	0.778
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	230548-230583	8	0.778
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	209623-209658	8	0.778
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	232201-232236	8	0.778
NZ_CP013690_9	9.1\|4175990\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4175990-4176019	30	MW149095	Microvirus sp. isolate gila33, complete genome	1837-1866	8	0.733
NZ_CP013690_9	9.1\|4175990\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4175990-4176019	30	MN693014	Marine virus AFVG_117M46, complete genome	19681-19710	8	0.733
NZ_CP013690_9	9.1\|4175990\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4175990-4176019	30	MN694411	Marine virus AFVG_250M1188, complete genome	34979-35008	8	0.733
NZ_CP013690_9	9.1\|4175990\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4175990-4176019	30	MN693004	Marine virus AFVG_117M22, complete genome	34948-34977	8	0.733
NZ_CP013690_9	9.2\|4176057\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176057-4176086	30	MW149095	Microvirus sp. isolate gila33, complete genome	1837-1866	8	0.733
NZ_CP013690_9	9.2\|4176057\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176057-4176086	30	MN693014	Marine virus AFVG_117M46, complete genome	19681-19710	8	0.733
NZ_CP013690_9	9.2\|4176057\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176057-4176086	30	MN694411	Marine virus AFVG_250M1188, complete genome	34979-35008	8	0.733
NZ_CP013690_9	9.2\|4176057\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176057-4176086	30	MN693004	Marine virus AFVG_117M22, complete genome	34948-34977	8	0.733
NZ_CP013690_9	9.3\|4176124\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176124-4176153	30	NZ_CP042608	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence	13847-13876	8	0.733
NZ_CP013690_9	9.6\|4176325\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176325-4176354	30	MK448727	Streptococcus phage Javan291, complete genome	27049-27078	8	0.733
NZ_CP013690_9	9.8\|4176459\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176459-4176488	30	MK170447	Methanosarcina virus MetMV, complete genome	2644-2673	8	0.733
NZ_CP013690_9	9.8\|4176459\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176459-4176488	30	MK170447	Methanosarcina virus MetMV, complete genome	61773-61802	8	0.733
NZ_CP013690_9	9.10\|4176593\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176593-4176622	30	NZ_CP023721	Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence	73466-73495	8	0.733
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_MG710483	Bacillus thuringiensis serovar israelensis strain Bti-UFT6.51 plasmid pBtiUFT6.51.2, complete sequence	1418-1453	9	0.75
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_CP015182	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB8291, complete sequence	692-727	9	0.75
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NC_018881	Bacillus thuringiensis Bt407 plasmid BTB_8p, complete sequence	7622-7657	9	0.75
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_CP004865	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB8240, complete sequence	692-727	9	0.75
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NC_020242	Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT8_2, complete sequence	1245-1280	9	0.75
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_MG710483	Bacillus thuringiensis serovar israelensis strain Bti-UFT6.51 plasmid pBtiUFT6.51.2, complete sequence	1418-1453	9	0.75
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_CP015182	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB8291, complete sequence	692-727	9	0.75
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NC_018881	Bacillus thuringiensis Bt407 plasmid BTB_8p, complete sequence	7622-7657	9	0.75
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_CP004865	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB8240, complete sequence	692-727	9	0.75
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NC_020242	Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT8_2, complete sequence	1245-1280	9	0.75
NZ_CP013690_9	9.6\|4176325\|30\|NZ_CP013690\|CRISPRCasFinder,CRT	4176325-4176354	30	MN693940	Marine virus AFVG_250M588, complete genome	6386-6415	9	0.7
NZ_CP013690_5	5.56\|3845477\|35\|NZ_CP013690\|PILER-CR,CRISPRCasFinder,CRT	3845477-3845511	35	NZ_CP018878	Bacillus megaterium strain JX285 plasmid 5, complete sequence	34770-34804	10	0.714
NZ_CP013690_5	5.56\|3845477\|35\|NZ_CP013690\|PILER-CR,CRISPRCasFinder,CRT	3845477-3845511	35	NZ_CP041067	Bacillus megaterium strain KNU-01 plasmid pKNU_01_3, complete sequence	99087-99121	10	0.714
NZ_CP013690_6	6.12\|3848284\|35\|NZ_CP013690\|CRT,CRISPRCasFinder	3848284-3848318	35	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	39950-39984	10	0.714
NZ_CP013690_6	6.12\|3848284\|35\|NZ_CP013690\|CRT,CRISPRCasFinder	3848284-3848318	35	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	173586-173620	10	0.714
NZ_CP013690_6	6.12\|3848284\|35\|NZ_CP013690\|CRT,CRISPRCasFinder	3848284-3848318	35	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	40164-40198	10	0.714
NZ_CP013690_6	6.22\|3847888\|34\|NZ_CP013690\|PILER-CR	3847888-3847921	34	AP014087	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C3-MedDCM-OCT-S46-C100, * SEQUENCING IN PROGRESS *	27460-27493	10	0.706
NZ_CP013690_5	5.62\|3845873\|34\|NZ_CP013690\|PILER-CR,CRISPRCasFinder,CRT	3845873-3845906	34	MH791414	UNVERIFIED: Aeromonas phage Aswh_1, complete genome	173272-173305	11	0.676
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NC_018490	Bacillus thuringiensis HD-771 plasmid p08, complete sequence	1097-1132	11	0.694
NZ_CP013690_6	6.8\|3848020\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848020-3848055	36	NZ_CP010099	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB8, complete sequence	2001-2036	11	0.694
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NC_018490	Bacillus thuringiensis HD-771 plasmid p08, complete sequence	1097-1132	11	0.694
NZ_CP013690_6	6.9\|3848086\|36\|NZ_CP013690\|CRT,CRISPRCasFinder	3848086-3848121	36	NZ_CP010099	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB8, complete sequence	2001-2036	11	0.694
NZ_CP013690_6	6.12\|3848284\|35\|NZ_CP013690\|CRT,CRISPRCasFinder	3848284-3848318	35	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	329354-329388	11	0.686

1. spacer 8.1|4077231|26|NZ_CP013690|CRISPRCasFinder matches to NZ_CP045340 (Vibrio sp. THAF190c plasmid pTHAF190c_b, complete sequence) position: , mismatch: 5, identity: 0.808

ttaaagtgtgagttttgttgttactt	CRISPR spacer
ataaagtgtgagtgttgttggtacca	Protospacer
 ************ ****** ***.

2. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to NC_016565 (Staphylococcus phage S24-1, complete genome) position: , mismatch: 6, identity: 0.8

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaaatcaatca	Protospacer
. * ************** ******** .*

3. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to AB626962 (Staphylococcus phage S24-1 DNA, complete genome) position: , mismatch: 6, identity: 0.8

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaaatcaatca	Protospacer
. * ************** ******** .*

4. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to AY954949 (Bacteriophage 66, complete genome) position: , mismatch: 6, identity: 0.8

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaaatcaatca	Protospacer
. * ************** ******** .*

5. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to NC_007046 (Staphylococcus phage 66, complete genome) position: , mismatch: 6, identity: 0.8

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaaatcaatca	Protospacer
. * ************** ******** .*

6. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to NC_048107 (Staphylococcus phage Pabna, complete genome) position: , mismatch: 6, identity: 0.8

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaaatcaatca	Protospacer
. * ************** ******** .*

7. spacer 9.6|4176325|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MT774409 (CrAssphage cr131_1, complete genome) position: , mismatch: 6, identity: 0.8

gttttattagtagtattactatataccaag	CRISPR spacer
ggtttactattagtattactatatacacaa	Protospacer
* ****.** ****************  *.

8. spacer 9.8|4176459|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MH598802 (Pelagibacter phage HTVC201P, complete genome) position: , mismatch: 6, identity: 0.8

gctatatcttcatttgtgccttcttctaac	CRISPR spacer
gacatatcttcttttctgccttcttctact	Protospacer
* .******** *** ************ .

9. spacer 9.1|4175990|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN855975 (Siphoviridae sp. isolate 45, complete genome) position: , mismatch: 7, identity: 0.767

catttgtaagtaaataaatcataagcattc	CRISPR spacer
atgttgtaaataaataaatcaaaagcatgt	Protospacer
   ******.*********** ****** .

10. spacer 9.1|4175990|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN694483 (Marine virus AFVG_250M1031, complete genome) position: , mismatch: 7, identity: 0.767

catttgt-----aagtaaataaatcataagcattc	CRISPR spacer
-----gtaggagaagcaaataaatcataagcattt	Protospacer
     **     ***.******************.

11. spacer 9.2|4176057|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN855975 (Siphoviridae sp. isolate 45, complete genome) position: , mismatch: 7, identity: 0.767

catttgtaagtaaataaatcataagcattc	CRISPR spacer
atgttgtaaataaataaatcaaaagcatgt	Protospacer
   ******.*********** ****** .

12. spacer 9.2|4176057|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN694483 (Marine virus AFVG_250M1031, complete genome) position: , mismatch: 7, identity: 0.767

catttgt-----aagtaaataaatcataagcattc	CRISPR spacer
-----gtaggagaagcaaataaatcataagcattt	Protospacer
     **     ***.******************.

13. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MF001367 (Staphylococcus phage SA4, partial genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaaatccatca	Protospacer
. * ************** ****** * .*

14. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN150710 (Staphylococcus phage vB_SauP-436A1, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaagtcaatca	Protospacer
. * ************** ***.**** .*

15. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MT926124 (Staphylococcus phage vB_SauP_EBHT, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaagtcaatca	Protospacer
. * ************** ***.**** .*

16. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to NC_031008 (Staphylococcus phage SLPW, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaagtcaatca	Protospacer
. * ************** ***.**** .*

17. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to KJ210330 (Staphylococcus phage GRCS, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaagtcaatca	Protospacer
. * ************** ***.**** .*

18. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to HF937074 (Staphylococcus phage PSa3 complete sequence) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaagtcaatca	Protospacer
. * ************** ***.**** .*

19. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to NC_047788 (Staphylococcus phage SCH1, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaagtcaatca	Protospacer
. * ************** ***.**** .*

20. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to EU136189 (Staphylococcus phage SAP-2, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaaatccatca	Protospacer
. * ************** ****** * .*

21. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to KY000085 (Staphylococcus phage SCH111, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaagtcaatca	Protospacer
. * ************** ***.**** .*

22. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to AB626963 (Staphylococcus phage S13' DNA, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaaatccatca	Protospacer
. * ************** ****** * .*

23. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MH107118 (Staphylococcus phage CSA13, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgtacaaaatccatca	Protospacer
. * ************** ****** * .*

24. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN098325 (Staphylococcus phage Portland, complete genome) position: , mismatch: 7, identity: 0.767

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
caggtgttaagttacgcacaaaatcaatca	Protospacer
. * ************.* ******** .*

25. spacer 9.8|4176459|30|NZ_CP013690|CRISPRCasFinder,CRT matches to NZ_CP034112 (Staphylococcus epidermidis strain CDC120 plasmid pSTA491, complete sequence) position: , mismatch: 7, identity: 0.767

gctatatcttcatttgtgccttctt--ctaac	CRISPR spacer
tgtatatcttcaatggtgccttcttggtta--	Protospacer
  ********** * **********  .**

26. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

27. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

28. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

29. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

30. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

31. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

32. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

33. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

34. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

35. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

36. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

37. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

38. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

39. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

40. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

41. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

42. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

43. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 8, identity: 0.778

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
ttttgttgttaaaaaaggatatataaattataacaa	Protospacer
** *. *.** * *********************..

44. spacer 9.1|4175990|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MW149095 (Microvirus sp. isolate gila33, complete genome) position: , mismatch: 8, identity: 0.733

catttgtaagtaaataaatcataagcattc	CRISPR spacer
tatttgtaaataaataactcataaatcacc	Protospacer
.********.******* ******..  .*

45. spacer 9.1|4175990|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN693014 (Marine virus AFVG_117M46, complete genome) position: , mismatch: 8, identity: 0.733

catttgta-----agtaaataaatcataagcattc	CRISPR spacer
-----ataggtctagttaataaatcataagcatta	Protospacer
     .**     *** *****************

46. spacer 9.1|4175990|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN694411 (Marine virus AFVG_250M1188, complete genome) position: , mismatch: 8, identity: 0.733

catttgtaagtaaataaatcataagcattc	CRISPR spacer
gagctgtaagtaaataaaccataaccagga	Protospacer
 * .**************.***** **

47. spacer 9.1|4175990|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN693004 (Marine virus AFVG_117M22, complete genome) position: , mismatch: 8, identity: 0.733

catttgtaagtaaataaatcataagcattc	CRISPR spacer
gagctgtaagtaaataaaccataaccagga	Protospacer
 * .**************.***** **

48. spacer 9.2|4176057|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MW149095 (Microvirus sp. isolate gila33, complete genome) position: , mismatch: 8, identity: 0.733

catttgtaagtaaataaatcataagcattc	CRISPR spacer
tatttgtaaataaataactcataaatcacc	Protospacer
.********.******* ******..  .*

49. spacer 9.2|4176057|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN693014 (Marine virus AFVG_117M46, complete genome) position: , mismatch: 8, identity: 0.733

catttgta-----agtaaataaatcataagcattc	CRISPR spacer
-----ataggtctagttaataaatcataagcatta	Protospacer
     .**     *** *****************

50. spacer 9.2|4176057|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN694411 (Marine virus AFVG_250M1188, complete genome) position: , mismatch: 8, identity: 0.733

catttgtaagtaaataaatcataagcattc	CRISPR spacer
gagctgtaagtaaataaaccataaccagga	Protospacer
 * .**************.***** **

51. spacer 9.2|4176057|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN693004 (Marine virus AFVG_117M22, complete genome) position: , mismatch: 8, identity: 0.733

catttgtaagtaaataaatcataagcattc	CRISPR spacer
gagctgtaagtaaataaaccataaccagga	Protospacer
 * .**************.***** **

52. spacer 9.3|4176124|30|NZ_CP013690|CRISPRCasFinder,CRT matches to NZ_CP042608 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence) position: , mismatch: 8, identity: 0.733

ttgttgttaagttacgtaaaaaatcaaata	CRISPR spacer
gagtttttaagtgacgtaaaaaatcgtgtt	Protospacer
  *** ****** ************. .*

53. spacer 9.6|4176325|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MK448727 (Streptococcus phage Javan291, complete genome) position: , mismatch: 8, identity: 0.733

gttttattagtagtattactatataccaag---	CRISPR spacer
gttctattagtagtattacta---atggggtga	Protospacer
***.*****************   *. ..*

54. spacer 9.8|4176459|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MK170447 (Methanosarcina virus MetMV, complete genome) position: , mismatch: 8, identity: 0.733

gctatatcttcatttgtgccttcttctaac	CRISPR spacer
tttatatcttcatctgtgacttcttttttt	Protospacer
 .***********.**** ******.*  .

55. spacer 9.8|4176459|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MK170447 (Methanosarcina virus MetMV, complete genome) position: , mismatch: 8, identity: 0.733

gctatatcttcatttgtgccttcttctaac	CRISPR spacer
tttatatcttcatctgtgacttcttttttt	Protospacer
 .***********.**** ******.*  .

56. spacer 9.10|4176593|30|NZ_CP013690|CRISPRCasFinder,CRT matches to NZ_CP023721 (Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

attaacaagttctatctgatcgatgaatac	CRISPR spacer
gtggccaagttccatctgatcgttgaatca	Protospacer
.* . *******.********* *****

57. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_MG710483 (Bacillus thuringiensis serovar israelensis strain Bti-UFT6.51 plasmid pBtiUFT6.51.2, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

58. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP015182 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB8291, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

59. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_018881 (Bacillus thuringiensis Bt407 plasmid BTB_8p, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

60. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP004865 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB8240, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

61. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_020242 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT8_2, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

62. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_MG710483 (Bacillus thuringiensis serovar israelensis strain Bti-UFT6.51 plasmid pBtiUFT6.51.2, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

63. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP015182 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB8291, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

64. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_018881 (Bacillus thuringiensis Bt407 plasmid BTB_8p, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

65. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP004865 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB8240, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

66. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_020242 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT8_2, complete sequence) position: , mismatch: 9, identity: 0.75

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
tattatgatttataaagtttatataaattataaaac	Protospacer
*  **  **********  ************** .

67. spacer 9.6|4176325|30|NZ_CP013690|CRISPRCasFinder,CRT matches to MN693940 (Marine virus AFVG_250M588, complete genome) position: , mismatch: 9, identity: 0.7

gttttattagtagtattactatataccaag	CRISPR spacer
actttattattagtattattatatatatta	Protospacer
..******* ********.******.   .

68. spacer 5.56|3845477|35|NZ_CP013690|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018878 (Bacillus megaterium strain JX285 plasmid 5, complete sequence) position: , mismatch: 10, identity: 0.714

tctgttaactgatctttaatttcaaaatatgtttg	CRISPR spacer
gatgttaactgatgtttaaattcaaaattaaaatc	Protospacer
  *********** ***** ********  .  *

69. spacer 5.56|3845477|35|NZ_CP013690|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041067 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_3, complete sequence) position: , mismatch: 10, identity: 0.714

tctgttaactgatctttaatttcaaaatatgtttg	CRISPR spacer
gatgttaactgatgtttaaattcaaaattaaaatc	Protospacer
  *********** ***** ********  .  *

70. spacer 6.12|3848284|35|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 10, identity: 0.714

aactgtagagattggagaattaaaagacaagaaaa	CRISPR spacer
ttcaaaaataattggagaattaacagagaagaaaa	Protospacer
  * . *. .************* *** *******

71. spacer 6.12|3848284|35|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 10, identity: 0.714

aactgtagagattggagaattaaaagacaagaaaa	CRISPR spacer
ttcaaaaataattggagaattaacagagaagaaaa	Protospacer
  * . *. .************* *** *******

72. spacer 6.12|3848284|35|NZ_CP013690|CRT,CRISPRCasFinder matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 10, identity: 0.714

aactgtagagattggagaattaaaagacaagaaaa	CRISPR spacer
ttcaaaaataattggagaattaacagagaagaaaa	Protospacer
  * . *. .************* *** *******

73. spacer 6.22|3847888|34|NZ_CP013690|PILER-CR matches to AP014087 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C3-MedDCM-OCT-S46-C100, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.706

tcagtcaatggataacaatatacttataacagtt	CRISPR spacer
ctatgtattgaataacaatatacatataacagaa	Protospacer
..*  .* **.************ ********

74. spacer 5.62|3845873|34|NZ_CP013690|PILER-CR,CRISPRCasFinder,CRT matches to MH791414 (UNVERIFIED: Aeromonas phage Aswh_1, complete genome) position: , mismatch: 11, identity: 0.676

gaagaaagagaaatgggtaagatggctaaacgat	CRISPR spacer
actttaaaagaaatgggtaagatggctcaaattg	Protospacer
.    **.******************* **

75. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_018490 (Bacillus thuringiensis HD-771 plasmid p08, complete sequence) position: , mismatch: 11, identity: 0.694

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
cattgtgatttataaagtttatataaattataaaac	Protospacer
.  *.  **********  ************** .

76. spacer 6.8|3848020|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP010099 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB8, complete sequence) position: , mismatch: 11, identity: 0.694

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
cattgtgatttataaagtttatataaattataaaac	Protospacer
.  *.  **********  ************** .

77. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NC_018490 (Bacillus thuringiensis HD-771 plasmid p08, complete sequence) position: , mismatch: 11, identity: 0.694

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
cattgtgatttataaagtttatataaattataaaac	Protospacer
.  *.  **********  ************** .

78. spacer 6.9|3848086|36|NZ_CP013690|CRT,CRISPRCasFinder matches to NZ_CP010099 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB8, complete sequence) position: , mismatch: 11, identity: 0.694

ttataatatttataaaggatatataaattataacgg	CRISPR spacer
cattgtgatttataaagtttatataaattataaaac	Protospacer
.  *.  **********  ************** .

79. spacer 6.12|3848284|35|NZ_CP013690|CRT,CRISPRCasFinder matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.686

aactgtagagattggagaattaaaagacaagaaaa-------	CRISPR spacer
ggctgtagagaatggagaaataaaag-------aatcttctt	Protospacer
..********* ******* ******       **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1006370 : 1016112

Bacillus_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006259878.1\|1006370_1009517_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	2.3e-08	21.3
WP_006259879.1\|1009628_1010234_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	4.5e-62	58.5
WP_006259880.1\|1010398_1011829_-	pyruvate kinase	NA	NA	NA	NA
WP_006259881.1\|1011833_1012322_-	IPExxxVDY family protein	NA	NA	NA	NA
WP_006259882.1\|1012419_1013166_-	ribonuclease III	M1HR51	Paramecium_bursaria_Chlorella_virus	2.9e-18	32.9
WP_006259883.1\|1013181_1014504_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_002988156.1\|1014636_1014873_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	1.8e-06	38.1
WP_006259885.1\|1015069_1015630_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.8e-18	33.1
WP_006259886.1\|1015638_1016112_+	ribonuclease HI	A0A2I7QI15	Vibrio_phage	3.1e-26	45.0

DBSCAN-SWA_2

2388335 : 2401449

Leptospira_phage(66.67%)

integrase,transposase

attL 2392451:2392510|attR 2398641:2399932

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005807145.1\|2388335_2389244_-\|transposase	IS1595-like element ISBbi1 family transposase	NA	NA	NA	NA
WP_050427871.1\|2389263_2389863_-	hypothetical protein	NA	NA	NA	NA
WP_008651082.1\|2390055_2391222_-	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_167343487.1\|2391661_2392450_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.4e-33	30.7
WP_058699401.1\|2392428_2393526_+\|transposase	IS91 family transposase	NA	NA	NA	NA
2392451:2392510	attL	NA	NA	NA	NA
WP_010256763.1\|2393877_2394507_+	type B chloramphenicol O-acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	4.3e-23	33.5
WP_004295324.1\|2394711_2395536_-	class D beta-lactamase OXA-347	NA	NA	NA	NA
WP_058699402.1\|2395709_2396534_-	class D beta-lactamase	NA	NA	NA	NA
WP_141113035.1\|2396717_2396879_-	DUF4197 domain-containing protein	NA	NA	NA	NA
WP_041321170.1\|2396909_2397359_-	hypothetical protein	NA	NA	NA	NA
WP_167343487.1\|2397851_2398640_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.4e-33	30.7
WP_058699401.1\|2398618_2399716_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_058699403.1\|2399925_2400471_-	hypothetical protein	NA	NA	NA	NA
2398641:2399932	attR	NA	NA	NA	NA
WP_057281936.1\|2400540_2401449_-\|transposase	IS1595-like element ISBbi1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

3225918 : 3292474

Bacillus_phage(28.57%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058699576.1\|3225918_3226905_-\|transposase	transposase	NA	NA	NA	NA
WP_006260368.1\|3226891_3227245_-	hypothetical protein	NA	NA	NA	NA
WP_058699577.1\|3227257_3228436_-\|protease	aspartyl protease family protein	NA	NA	NA	NA
WP_006258851.1\|3228624_3229236_+	bifunctional nicotinamidase/pyrazinamidase	A0A1V0SL12	Klosneuvirus	1.5e-17	30.1
WP_006258850.1\|3229239_3229782_+	hypothetical protein	NA	NA	NA	NA
WP_006258849.1\|3229871_3230453_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_058699578.1\|3230517_3231285_-	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
WP_039851692.1\|3232120_3232780_+	hypothetical protein	NA	NA	NA	NA
WP_006258845.1\|3232895_3234179_+	hypothetical protein	NA	NA	NA	NA
WP_006258844.1\|3234210_3235230_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_006258843.1\|3235312_3236128_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_006258842.1\|3236220_3236883_-	thiamine diphosphokinase	NA	NA	NA	NA
WP_006261228.1\|3237006_3237315_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_006258840.1\|3237672_3238551_+	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	1.6e-15	28.5
WP_006258839.1\|3238664_3240068_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-46	29.3
WP_006258838.1\|3240213_3240789_+	hypothetical protein	NA	NA	NA	NA
WP_006258837.1\|3240910_3241312_+	hypothetical protein	NA	NA	NA	NA
WP_006258836.1\|3241311_3241863_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_006258835.1\|3241975_3242770_+	hypothetical protein	NA	NA	NA	NA
WP_006258834.1\|3242756_3243131_+	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_006258833.1\|3243132_3244914_+	ATPase	NA	NA	NA	NA
WP_006258832.1\|3244922_3245606_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_006258831.1\|3245623_3246451_+	4,5-DOPA dioxygenase extradiol	NA	NA	NA	NA
WP_006258830.1\|3246453_3247308_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_058699579.1\|3247297_3248341_-	nitronate monooxygenase	NA	NA	NA	NA
WP_006258828.1\|3248352_3249498_-	serine hydrolase	G1FGA1	Mycobacterium_phage	1.1e-05	24.8
WP_058699580.1\|3249597_3250713_-	aminopeptidase	NA	NA	NA	NA
WP_006258825.1\|3250784_3251624_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_006258824.1\|3252373_3252676_+	hypothetical protein	NA	NA	NA	NA
WP_006258823.1\|3252801_3253713_+	1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA	NA	NA	NA
WP_006258821.1\|3253724_3254411_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_006258820.1\|3254413_3255457_+	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_006263614.1\|3255516_3256386_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_058699581.1\|3256624_3257491_+	transporter	NA	NA	NA	NA
WP_016649375.1\|3257527_3258436_-	phospholipase A	NA	NA	NA	NA
WP_058699582.1\|3258447_3261090_-	DNA gyrase/topoisomerase IV subunit A	A0A172JHV7	Bacillus_phage	2.9e-41	30.8
WP_006265332.1\|3261094_3262945_-	type IIA DNA topoisomerase subunit B	A0A172JHT4	Bacillus_phage	9.5e-71	31.4
WP_016649373.1\|3263022_3263943_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_006258810.1\|3264171_3265266_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_006258809.1\|3265543_3265840_-	hypothetical protein	NA	NA	NA	NA
WP_006258808.1\|3265934_3266909_-	deoxyhypusine synthase family protein	NA	NA	NA	NA
WP_006261249.1\|3266948_3268346_-	decarboxylase	NA	NA	NA	NA
WP_058699583.1\|3268720_3269788_-	3-dehydroquinate synthase	NA	NA	NA	NA
WP_006258819.1\|3270008_3271178_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_006258805.1\|3271507_3271738_+	hypothetical protein	NA	NA	NA	NA
WP_058699584.1\|3271727_3272054_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_058699585.1\|3272184_3273780_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.1e-67	36.5
WP_081048718.1\|3273829_3274168_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_058699130.1\|3274167_3274458_-	hypothetical protein	NA	NA	NA	NA
WP_155601818.1\|3274586_3275318_-	hypothetical protein	NA	NA	NA	NA
WP_058699587.1\|3275393_3275738_-	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_058699588.1\|3276615_3278574_-	OmpA family protein	NA	NA	NA	NA
WP_006258801.1\|3278603_3279536_-	type IX secretion system membrane protein PorP/SprF	NA	NA	NA	NA
WP_058699589.1\|3279544_3280837_-	gliding motility-associated C-terminal domain-containing protein	NA	NA	NA	NA
WP_058699590.1\|3280853_3283436_-	hypothetical protein	NA	NA	NA	NA
WP_006265340.1\|3283395_3283902_-	hypothetical protein	NA	NA	NA	NA
WP_058699591.1\|3283904_3290843_-	hypothetical protein	NA	NA	NA	NA
WP_155601819.1\|3291272_3292166_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_016361605.1\|3292159_3292474_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

3297308 : 3361196

Acidithiobacillus_phage(12.5%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006256854.1\|3297308_3297623_+\|transposase	transposase	NA	NA	NA	NA
WP_131540847.1\|3297616_3298510_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_006260108.1\|3300225_3301773_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.7e-81	34.2
WP_006260107.1\|3301798_3302551_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	4.2e-17	25.8
WP_058699595.1\|3303452_3304688_-	GTP-binding protein	A0A1V0SGC3	Hokovirus	3.6e-34	26.8
WP_006265356.1\|3304707_3305610_-	sulfate adenylyltransferase subunit 2	NA	NA	NA	NA
WP_025126046.1\|3305630_3306338_-	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
WP_073144814.1\|3306403_3306820_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_006265358.1\|3307377_3308067_-	hypothetical protein	NA	NA	NA	NA
WP_006260390.1\|3308181_3308511_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_006261282.1\|3308577_3308823_+	DUF2132 domain-containing protein	NA	NA	NA	NA
WP_006260392.1\|3308910_3309165_-	hypothetical protein	NA	NA	NA	NA
WP_058699596.1\|3309224_3309533_-	hypothetical protein	NA	NA	NA	NA
WP_006263641.1\|3309891_3311565_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_006260167.1\|3311699_3311999_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_058699597.1\|3312068_3313034_+	LLM class oxidoreductase	NA	NA	NA	NA
WP_006260165.1\|3313710_3314898_+	calcium:proton antiporter	NA	NA	NA	NA
WP_006261287.1\|3315218_3315968_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_006261288.1\|3315922_3316804_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_006260162.1\|3316797_3318534_-	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
WP_058699598.1\|3318543_3321801_-	TonB-dependent receptor	Q2PGD7	Norovirus	1.4e-08	25.3
WP_006260160.1\|3322507_3323350_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_006260159.1\|3323351_3324242_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_006265368.1\|3324231_3325089_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_006260157.1\|3325078_3325825_+	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.6e-19	31.9
WP_081048730.1\|3325926_3326178_-	hydroxyacid dehydrogenase	NA	NA	NA	NA
WP_058699600.1\|3326263_3326812_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_058699601.1\|3326815_3327421_-	hypothetical protein	NA	NA	NA	NA
WP_006265371.1\|3327429_3328650_-	hypothetical protein	NA	NA	NA	NA
WP_006263651.1\|3328828_3329512_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_006265372.1\|3329501_3330191_-	hypothetical protein	NA	NA	NA	NA
WP_006265373.1\|3330373_3330928_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	2.4e-38	45.7
WP_058700039.1\|3331143_3332142_+	OmpA family protein	NA	NA	NA	NA
WP_006265375.1\|3332318_3333083_-	hypothetical protein	NA	NA	NA	NA
WP_006258819.1\|3333288_3334458_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_006263660.1\|3334566_3334704_-	hypothetical protein	NA	NA	NA	NA
WP_006260145.1\|3334792_3335611_-	GLPGLI family protein	NA	NA	NA	NA
WP_006261303.1\|3335828_3336617_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_006265376.1\|3336635_3337166_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_006260142.1\|3337268_3337637_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_006263662.1\|3337647_3337896_-	hypothetical protein	NA	NA	NA	NA
WP_006263663.1\|3338067_3339090_-	c-type cytochrome	NA	NA	NA	NA
WP_006260139.1\|3339169_3340036_-	hypothetical protein	NA	NA	NA	NA
WP_006261307.1\|3340061_3342050_-	TonB-dependent receptor	NA	NA	NA	NA
WP_006265377.1\|3342055_3342952_-	hypothetical protein	NA	NA	NA	NA
WP_006260135.1\|3343378_3343708_-	hypothetical protein	NA	NA	NA	NA
WP_006265378.1\|3344192_3344720_+	hypothetical protein	NA	NA	NA	NA
WP_006265379.1\|3344808_3346608_-	WG repeat-containing protein	NA	NA	NA	NA
WP_058699602.1\|3346604_3347951_-	hypothetical protein	NA	NA	NA	NA
WP_006265381.1\|3348074_3349091_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_006260127.1\|3349229_3349946_+	hypothetical protein	NA	NA	NA	NA
WP_006265382.1\|3350104_3350872_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_006265383.1\|3351112_3352330_-	tetracycline resistance MFS efflux pump	A0A2H4UVM2	Bodo_saltans_virus	3.0e-09	22.0
WP_058699603.1\|3352409_3353285_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_058699604.1\|3353391_3353742_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_058699605.1\|3353827_3354343_+	dihydrofolate reductase	NA	NA	NA	NA
WP_058700040.1\|3354569_3355979_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_058699606.1\|3356130_3357435_-	serine hydroxymethyltransferase	G9I092	Helicoverpa_zea_nudivirus	7.1e-89	46.7
WP_058699608.1\|3359967_3360549_-	hypothetical protein	NA	NA	NA	NA
WP_006263319.1\|3360542_3361196_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_5

3366017 : 3437407

Leptospira_phage(50.0%)

integrase,transposase

attL 3405421:3405480|attR 3429271:3430255

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006260108.1\|3366017_3367565_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.7e-81	34.2
WP_038987545.1\|3370954_3374134_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	3.7e-91	25.0
WP_038987543.1\|3375247_3376573_-	TolC family protein	NA	NA	NA	NA
WP_058699612.1\|3376589_3377198_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_038987541.1\|3377524_3378223_-	response regulator transcription factor	NA	NA	NA	NA
WP_081048731.1\|3378219_3379290_-	histidine kinase	NA	NA	NA	NA
WP_058699614.1\|3379355_3380366_-	hypothetical protein	NA	NA	NA	NA
WP_115283946.1\|3381770_3382004_-	GTP-binding protein	NA	NA	NA	NA
WP_162264447.1\|3382010_3382133_-	cobalamin biosynthesis protein CobW	NA	NA	NA	NA
WP_144964311.1\|3382692_3383001_-	hypothetical protein	NA	NA	NA	NA
WP_058699616.1\|3383727_3384783_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_058699617.1\|3385252_3385507_+	DNA-binding protein	NA	NA	NA	NA
WP_058699618.1\|3385511_3385820_+	hypothetical protein	NA	NA	NA	NA
WP_058699619.1\|3385826_3387149_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	4.6e-27	30.8
WP_058699620.1\|3387556_3388237_-	protein phosphatase 2C domain-containing protein	Q9YVV7	Melanoplus_sanguinipes_entomopoxvirus	6.5e-09	27.4
WP_058699621.1\|3388237_3393646_-	ATP-binding protein	NA	NA	NA	NA
WP_058699622.1\|3393655_3394207_-	hypothetical protein	NA	NA	NA	NA
WP_005807145.1\|3394314_3395223_+\|transposase	IS1595-like element ISBbi1 family transposase	NA	NA	NA	NA
WP_001043260.1\|3395294_3396110_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_058699623.1\|3396650_3398648_+	N-6 DNA methylase	A0A142K7G3	Mycobacterium_phage	2.2e-33	28.6
WP_058699624.1\|3398650_3400012_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_058699625.1\|3400002_3404451_+	protein kinase	M1I1A9	Paramecium_bursaria_Chlorella_virus	1.2e-15	31.2
WP_058699626.1\|3404453_3405425_+	hypothetical protein	NA	NA	NA	NA
3405421:3405480	attL	NA	NA	NA	NA
WP_057281936.1\|3405433_3406342_-\|transposase	IS1595-like element ISBbi1 family transposase	NA	NA	NA	NA
WP_050427871.1\|3406361_3406961_-	hypothetical protein	NA	NA	NA	NA
WP_008651082.1\|3407153_3408320_-	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_073028679.1\|3408633_3409536_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.4e-35	31.3
WP_058699628.1\|3409514_3410612_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_009040233.1\|3410991_3412218_+	EreD family erythromycin esterase	NA	NA	NA	NA
WP_073028679.1\|3412519_3413422_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.4e-35	31.3
WP_058699629.1\|3413400_3414498_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003013318.1\|3414732_3415596_-	aminoglycoside 6-adenylyltransferase AadS	NA	NA	NA	NA
WP_081048747.1\|3415923_3416826_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.0e-35	31.4
WP_058699630.1\|3416804_3417902_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003013318.1\|3418136_3419000_-	aminoglycoside 6-adenylyltransferase AadS	NA	NA	NA	NA
WP_073028679.1\|3419328_3420231_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.4e-35	31.3
WP_058699629.1\|3420209_3421307_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003013318.1\|3421541_3422405_-	aminoglycoside 6-adenylyltransferase AadS	NA	NA	NA	NA
WP_005938297.1\|3422575_3423433_-	class D beta-lactamase	NA	NA	NA	NA
WP_058699631.1\|3423627_3424062_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024568394.1\|3424649_3425114_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004295324.1\|3425300_3426125_-	class D beta-lactamase OXA-347	NA	NA	NA	NA
WP_081048734.1\|3426468_3427371_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	4.1e-35	31.0
WP_058699633.1\|3427349_3428447_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_005807148.1\|3428668_3429214_-	hypothetical protein	NA	NA	NA	NA
WP_057281936.1\|3429283_3430192_-\|transposase	IS1595-like element ISBbi1 family transposase	NA	NA	NA	NA
WP_058699634.1\|3430248_3431091_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
3429271:3430255	attR	NA	NA	NA	NA
WP_058699635.1\|3431080_3432067_-	hypothetical protein	NA	NA	NA	NA
WP_058699636.1\|3432257_3432812_-\|transposase	transposase	NA	NA	NA	NA
WP_058699637.1\|3433310_3433745_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_155601820.1\|3434250_3434496_+	hypothetical protein	NA	NA	NA	NA
WP_058699639.1\|3434497_3434914_+	hypothetical protein	NA	NA	NA	NA
WP_058699640.1\|3434981_3435452_-	JAB domain-containing protein	A0A1B2LRS6	Wolbachia_phage	5.8e-09	33.3
WP_058699642.1\|3436205_3436520_+\|transposase	transposase	NA	NA	NA	NA
WP_155601821.1\|3436513_3437407_+\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

3440611 : 3504695

Leptospira_phage(46.15%)

integrase,transposase

attL 3447579:3447595|attR 3502134:3502150

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058699129.1\|3440611_3442186_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.1e-67	36.5
WP_081048718.1\|3442235_3442574_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_058699130.1\|3442573_3442864_-	hypothetical protein	NA	NA	NA	NA
WP_058699645.1\|3443372_3443771_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_058699646.1\|3443937_3445515_+	SIR2 family protein	A0A1S5SA14	Streptococcus_phage	2.2e-23	28.1
WP_058699647.1\|3445624_3445879_+	hypothetical protein	NA	NA	NA	NA
WP_058699648.1\|3445988_3447308_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.1e-28	31.0
3447579:3447595	attL	NA	NA	NA	NA
WP_058699649.1\|3447744_3449016_+\|integrase	tyrosine-type recombinase/integrase	H7BUI8	unidentified_phage	3.3e-14	26.3
WP_058699650.1\|3449012_3449915_+	hypothetical protein	NA	NA	NA	NA
WP_006260872.1\|3450129_3450429_+	DUF3853 family protein	NA	NA	NA	NA
WP_058699651.1\|3450525_3451761_+	hypothetical protein	NA	NA	NA	NA
WP_058699652.1\|3451980_3452931_+	toprim domain-containing protein	NA	NA	NA	NA
WP_058700042.1\|3453026_3453326_+	hypothetical protein	NA	NA	NA	NA
WP_058699653.1\|3453328_3454243_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_058699654.1\|3454246_3454735_+	hypothetical protein	NA	NA	NA	NA
WP_058699655.1\|3455110_3456763_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-40	27.2
WP_058699656.1\|3456762_3457119_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_058699657.1\|3457166_3457772_-	mercuric transport protein MerTP	NA	NA	NA	NA
WP_058699658.1\|3457768_3458146_-	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	1.4e-08	30.2
WP_081048747.1\|3458579_3459482_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.0e-35	31.4
WP_058699630.1\|3459460_3460558_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003013318.1\|3460792_3461656_-	aminoglycoside 6-adenylyltransferase AadS	NA	NA	NA	NA
WP_006258819.1\|3462121_3463291_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_073028679.1\|3465097_3466000_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.4e-35	31.3
WP_058699629.1\|3465978_3467076_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003013318.1\|3467310_3468174_-	aminoglycoside 6-adenylyltransferase AadS	NA	NA	NA	NA
WP_081048747.1\|3468501_3469404_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.0e-35	31.4
WP_058699630.1\|3469382_3470480_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003013318.1\|3470714_3471578_-	aminoglycoside 6-adenylyltransferase AadS	NA	NA	NA	NA
WP_073028679.1\|3471905_3472808_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.4e-35	31.3
WP_058699629.1\|3472786_3473884_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003013318.1\|3474118_3474982_-	aminoglycoside 6-adenylyltransferase AadS	NA	NA	NA	NA
WP_005938297.1\|3475152_3476010_-	class D beta-lactamase	NA	NA	NA	NA
WP_058699631.1\|3476204_3476639_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024568394.1\|3477226_3477691_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_081048734.1\|3479040_3479943_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	4.1e-35	31.0
WP_155601822.1\|3483367_3483580_-	hypothetical protein	NA	NA	NA	NA
WP_081048754.1\|3483593_3483908_-	hypothetical protein	NA	NA	NA	NA
WP_058699662.1\|3483918_3484563_-	hypothetical protein	NA	NA	NA	NA
WP_058699663.1\|3484956_3485226_-	hypothetical protein	NA	NA	NA	NA
WP_058699498.1\|3488635_3488935_-	DUF3853 family protein	NA	NA	NA	NA
WP_058699497.1\|3489324_3489831_-	hypothetical protein	NA	NA	NA	NA
WP_058699496.1\|3489883_3490654_-	hypothetical protein	NA	NA	NA	NA
WP_058699495.1\|3490711_3491596_-	hypothetical protein	NA	NA	NA	NA
WP_058699494.1\|3491592_3492864_-\|integrase	tyrosine-type recombinase/integrase	H7BUI8	unidentified_phage	1.9e-17	27.7
WP_006260074.1\|3493299_3494619_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	9.9e-30	31.0
WP_006260075.1\|3494730_3494985_-	DNA-binding protein	NA	NA	NA	NA
WP_006260076.1\|3495200_3495608_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016361611.1\|3495747_3496431_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_006260078.1\|3496470_3496788_+	hypothetical protein	NA	NA	NA	NA
WP_006260080.1\|3497515_3497764_-	hypothetical protein	NA	NA	NA	NA
WP_006260081.1\|3497769_3498219_-	hypothetical protein	NA	NA	NA	NA
WP_006260082.1\|3498431_3498692_+	hypothetical protein	NA	NA	NA	NA
WP_006260084.1\|3499485_3500466_+	hypothetical protein	NA	NA	NA	NA
WP_006260085.1\|3500574_3500850_+	hypothetical protein	NA	NA	NA	NA
WP_006260086.1\|3501164_3501797_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_058699664.1\|3502280_3503267_-\|transposase	transposase	NA	NA	NA	NA
3502134:3502150	attR	NA	NA	NA	NA
WP_006260368.1\|3503253_3503607_-	hypothetical protein	NA	NA	NA	NA
WP_058699665.1\|3503708_3504695_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

4317407 : 4357005

Leptospira_phage(40.0%)

tRNA,integrase,transposase

attL 4344752:4344767|attR 4361002:4361017

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006261325.1\|4317407_4318619_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_006265446.1\|4318633_4319575_+	nitronate monooxygenase	NA	NA	NA	NA
WP_006261323.1\|4319710_4321621_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	4.1e-85	38.1
WP_006263693.1\|4321728_4321926_-	hypothetical protein	NA	NA	NA	NA
WP_058699981.1\|4321939_4323301_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
WP_058699982.1\|4323393_4323777_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_006260067.1\|4323968_4324235_+	DUF4834 family protein	NA	NA	NA	NA
WP_058699983.1\|4324368_4326810_+	YfhO family protein	NA	NA	NA	NA
WP_058699984.1\|4327051_4328347_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_058699985.1\|4328553_4331367_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	3.1e-230	46.6
WP_006260071.1\|4332114_4332702_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_006260072.1\|4332997_4333669_-	endonuclease III	NA	NA	NA	NA
WP_058699986.1\|4335906_4337226_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	2.9e-29	30.7
WP_002985535.1\|4337336_4337591_-	DNA-binding protein	NA	NA	NA	NA
WP_058699987.1\|4337717_4339310_-	hypothetical protein	NA	NA	NA	NA
WP_058699988.1\|4339488_4339887_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_058699989.1\|4339967_4341464_+	FRG domain-containing protein	NA	NA	NA	NA
WP_058699990.1\|4341590_4341878_-	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_081048746.1\|4341877_4342312_-	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_058699991.1\|4342828_4344850_+	ATP-binding protein	NA	NA	NA	NA
4344752:4344767	attL	NA	NA	NA	NA
WP_058699992.1\|4344964_4347034_+	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_058699993.1\|4347030_4347729_+	DUF2290 domain-containing protein	NA	NA	NA	NA
WP_058699994.1\|4347870_4348074_+	hypothetical protein	NA	NA	NA	NA
WP_058699629.1\|4348509_4349607_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_073028679.1\|4349585_4350488_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.4e-35	31.3
WP_006258819.1\|4352293_4353463_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_003013318.1\|4353928_4354792_+	aminoglycoside 6-adenylyltransferase AadS	NA	NA	NA	NA
WP_058699630.1\|4355026_4356124_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_081048747.1\|4356102_4357005_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.0e-35	31.4
4361002:4361017	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP013691

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

42258 : 54227

Leptospira_phage(50.0%)

transposase,integrase

attL 46361:46420|attR 53152:54450

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005807145.1\|42258_43167_-\|transposase	IS1595-like element ISBbi1 family transposase	NA	NA	NA	NA
WP_050427871.1\|43186_43786_-	hypothetical protein	B5WZL1	Staphylococcus_phage	1.4e-07	37.5
WP_008651082.1\|43978_45145_-	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_081048758.1\|45457_46360_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	2.2e-33	29.9
WP_058700111.1\|46338_47436_+\|transposase	IS91 family transposase	NA	NA	NA	NA
46361:46420	attL	NA	NA	NA	NA
WP_010256763.1\|47799_48429_+	type B chloramphenicol O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	1.1e-23	41.6
WP_081048759.1\|48904_49807_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	7.0e-35	30.7
WP_058700113.1\|49785_50883_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003013318.1\|51106_51970_-	aminoglycoside 6-adenylyltransferase AadS	E4ZFP8	Streptococcus_phage	1.3e-27	28.7
WP_081048761.1\|52248_53151_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	2.2e-33	29.9
WP_058700111.1\|53129_54227_+\|transposase	IS91 family transposase	NA	NA	NA	NA
53152:54450	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013690

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP013691

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection