CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013484	Vibrio alginolyticus strain ATCC 33787 chromosome I, complete sequence	1 crisprs	cas3,DinG,DEDDh,csa3,RT	2	1	6	0
NZ_CP013485	Vibrio alginolyticus strain ATCC 33787 chromosome II	0 crisprs	csa3,cas3,DEDDh,WYL,RT	0	0	1	1
NZ_CP013486	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence	0 crisprs	cas14j	0	0	8	0
NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	1 crisprs	RT,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	6	42	0	0
NZ_CP013488	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL96, complete sequence	0 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013484_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013484_1

1900707-1900954

Orphan

Consensus_repeat	Method
TAATGCCTCCTTAGCTCAGTAGGTAGAGCAACGGACTGATAATCCGC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP013484_1

>merge|NZ_CP013484|1|1900707-1900954|PILER-CR
TGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTTTTGCCTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGTCGGTGGTTCGATTCCGCCTCGAGGCACCATATCTGGTGCACTTGCTTCATAAGCAAGACACAAAAAAGAATAATTCCTCCTTAGCTCAGTTGGTAGAGCGACGGACTGTTAATCCGC

>NZ_CP013484|1|1|1900707-1900954|PILER-CR
TGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGG	TCACCAGTTCGATTCCGGTAGTCGGCACCATTCTTTTGC
CTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGTCG	GTGGTTCGATTCCGCCTCGAGGCACCATATCTGGTGCACTTGCTTCATAAGCAAGACACAAAAAAGAATAATTC
CTCCTTAGCTCAGTTGGTAGAGCGACGGACTGTTAATCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013484.1\|WP_081048906.1\|1903663_1905100_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
NZ_CP013484.1\|WP_005381064.1\|1916847_1918182_-\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP013484.1\|WP_031777269.1\|1916484_1916796_-\|PTS-lactose/cellobiose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|224364
NZ_CP013484.1\|WP_005381009.1\|1892650_1893253_+\|XTP/dITP-diphosphatase	unknown	unknown	gnl\|CDD\|234648
NZ_CP013484.1\|WP_005381066.1\|1918823_1920107_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200570
NZ_CP013484.1\|WP_005381010.1\|1892100_1892532_+\|DUF4426-domain-containing-protein	unknown	unknown	gnl\|CDD\|379616
NZ_CP013484.1\|WP_064368781.1\|1913272_1914271_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380494
NZ_CP013484.1\|WP_005381001.1\|1898974_1900114_+\|membrane-bound-lytic-murein-transglycosylase-MltC	unknown	unknown	gnl\|CDD\|183271
NZ_CP013484.1\|WP_005381048.1\|1915149_1916472_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_CP013484.1\|WP_005381002.1\|1898624_1898897_+\|oxidative-damage-protection-protein	unknown	unknown	gnl\|CDD\|180059
NZ_CP013484.1\|WP_005381046.1\|1914375_1915131_-\|chitin-disaccharide-deacetylase	unknown	unknown	gnl\|CDD\|235007
NZ_CP013484.1\|WP_005384506.1\|1896605_1897325_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP013484.1\|WP_064368779.1\|1893271_1894450_+\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|235550
NZ_CP013484.1\|WP_005381029.1\|1911888_1913142_-\|HD-GYP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_CP013484.1\|WP_064368780.1\|1901262_1902888_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP013484.1\|WP_064368778.1\|1891681_1891972_+\|YggU-family-protein	unknown	unknown	gnl\|CDD\|179931
NZ_CP013484.1\|WP_005384509.1\|1895559_1896588_-\|DNA-methylase	unknown	unknown	gnl\|CDD\|223971
NZ_CP013484.1\|WP_017635575.1\|1897528_1898605_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|182805
NZ_CP013484.1\|WP_064368782.1\|1918270_1918576_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99906
NZ_CP013484.1\|WP_005381007.1\|1894540_1895461_-\|glutaminase-B	unknown	unknown	gnl\|CDD\|234880

Protein	Function_ID	Function_description	E-value
NZ_CP013484.1\|WP_081048906.1\|1903663_1905100_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NZ_CP013484.1\|WP_005381064.1\|1916847_1918182_-\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	7.08839e-153
NZ_CP013484.1\|WP_031777269.1\|1916484_1916796_-\|PTS-lactose/cellobiose-transporter-subunit-IIA	gnl\|CDD\|224364	COG1447, CelC, Phosphotransferase system cellobiose-specific component IIA [Carbohydrate transport and metabolism].	6.82212e-37
NZ_CP013484.1\|WP_005381009.1\|1892650_1893253_+\|XTP/dITP-diphosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	3.88474e-123
NZ_CP013484.1\|WP_005381066.1\|1918823_1920107_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200570	cd10946, CE4_Mll8295_like, Putative catalytic NodB homology domain of uncharacterized Mll8295 protein encoded from Rhizobium loti and its bacterial homologs. This family is represented by a putative polysaccharide deacetylase Mll8295 encoded from Rhizobium loti. Although its biological function still remains unknown, Mll8295 shows high sequence homology to the catalytic domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), which is an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Both Mll8295 and SpPgdA belong to the carbohydrate esterase 4 (CE4) superfamily. This family also includes many uncharacterized bacterial polysaccharide deacetylases.	3.64002e-70
NZ_CP013484.1\|WP_005381010.1\|1892100_1892532_+\|DUF4426-domain-containing-protein	gnl\|CDD\|379616	pfam14467, DUF4426, Domain of unknown function (DUF4426). Members of this entry are found mostly in g-proteobacteria, especially in Vibrio. Strangely enough, there seems to be one eukaryotic homolog in Nematostella vectensis (NEMVEDRAFT_v1g226006), where the PA0388-like domain is fused with a domain homogous to the Methionine biosynthesis protein MetW (see below). In several Pseudomonas species, but also in Vibrio vulnificus and Azotobacter vinelandii PA0388 homologs are genomic neighbors of Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) and Methionine biosynthesis protein MetW. On the other hand, in most Vibrio species it appears as a part of a conserved operon involved in possible response to stress.	4.01664e-66
NZ_CP013484.1\|WP_064368781.1\|1913272_1914271_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380494	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Transcription of the galactose regulon genes is regulated by Gal iso-repressor (GalS) and Gal repressor (GalR) in different ways, but both repressors recognize the same DNA binding site in the absence of D-galactose. GalS is a dimeric protein like GalR,and its major role is in regulating expression of the high-affinity galactose transporter encoded by the mgl operon, whereas GalR is the exclusive regulator of galactose permease, the low-affinity galactose transporter. GalS and GalR are members of the LacI-GalR family of transcription regulators and both contain the type 1 periplasmic binding protein-like fold. Hence, they are homologous to the periplasmic sugar binding of ABC-type transport systems.	3.21574e-113
NZ_CP013484.1\|WP_005381001.1\|1898974_1900114_+\|membrane-bound-lytic-murein-transglycosylase-MltC	gnl\|CDD\|183271	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC.	8.90498e-147
NZ_CP013484.1\|WP_005381048.1\|1915149_1916472_-\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP013484.1\|WP_005381002.1\|1898624_1898897_+\|oxidative-damage-protection-protein	gnl\|CDD\|180059	PRK05408, PRK05408, oxidative damage protection protein; Provisional.	2.80095e-59
NZ_CP013484.1\|WP_005381046.1\|1914375_1915131_-\|chitin-disaccharide-deacetylase	gnl\|CDD\|235007	PRK02134, PRK02134, chitin disaccharide deacetylase.	2.73111e-124
NZ_CP013484.1\|WP_005384506.1\|1896605_1897325_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	1.04237e-109
NZ_CP013484.1\|WP_064368779.1\|1893271_1894450_+\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|235550	PRK05660, PRK05660, radical SAM family heme chaperone HemW.	0
NZ_CP013484.1\|WP_005381029.1\|1911888_1913142_-\|HD-GYP-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	2.25733e-72
NZ_CP013484.1\|WP_064368780.1\|1901262_1902888_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.69952e-61
NZ_CP013484.1\|WP_064368778.1\|1891681_1891972_+\|YggU-family-protein	gnl\|CDD\|179931	PRK05090, PRK05090, hypothetical protein; Validated.	1.44884e-58
NZ_CP013484.1\|WP_005384509.1\|1895559_1896588_-\|DNA-methylase	gnl\|CDD\|223971	COG1041, COG1041, Predicted DNA modification methylase [DNA replication, recombination, and repair].	8.36224e-09
NZ_CP013484.1\|WP_017635575.1\|1897528_1898605_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|182805	PRK10880, PRK10880, adenine DNA glycosylase.	0
NZ_CP013484.1\|WP_064368782.1\|1918270_1918576_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99906	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include chitobiose/lichenan, ascorbate, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	7.27173e-45
NZ_CP013484.1\|WP_005381007.1\|1894540_1895461_-\|glutaminase-B	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	0

>NZ_CP013484.1|WP_005381001.1|1898974_1900114_+|membrane-bound-lytic-murein-transglycosylase-MltC
MKKIVFIAAALLMAGCSREFVEKIYDVNYEPTNRFANNLAELPGQFEKDTAALDALINSFSGNIQKRWGKKEIKYAGKSNYVKYIDNYLSRAEVDFRKGVITIETVSPTEPQKHLKDAIVTTLLTPDDPAHVDLFSSKGITLEGQPFLYKQVVDQDNKPIQWSWRANRFAEYLIANKIKTKNVDFKKAYYVEIPMVEDHFSTRSYQYADIVRRASKKYDIPEDLIYAIIKTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKLVKKRSGQPSPEYLFNPENNIDTGTAYFYILKNRYLREVRHPTSLEYSMISAYNGGTGGVLNTFHRSDRKRAMQDLNSLQPNQVYWALTKKHPNAEARRYLEKVTNFKKEFNSKQTL
>NZ_CP013484.1|WP_005381002.1|1898624_1898897_+|oxidative-damage-protection-protein
MSRTVFCARLKKEGEGLDFQLYPGELGKRIFDNISKEAWAQWQHKQTMLINEKKLNMMDPEHRKLIETEMVNFLFEGKDVHIEGYTPPSE
>NZ_CP013484.1|WP_017635575.1|1897528_1898605_+|A/G-specific-adenine-glycosylase
MTPFASAILEWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVIDLANAEQDEVLHLWTGLGYYARARNLHKAAQEVASTYNGEFPLDIEKMNALPGIGRSTAAAILSSVYKQPHAILDGNVKRTLSRCFAVAGWPGQKKVENQLWEIAETHTPQTDVDKYNQAMMDMGAMVCTRSKPKCSLCPVADLCVAKQQGNVLDYPGKKPKKDKPIKQTRFVMLHHNTENGHEVWLEQRPQTGIWGGLFCFPQTEHVDAESDIELLLDQRGIQASNIKQKQTLITFRHTFSHYHLDITPILIDLSKQPDVIMEGNKGLWYNLSKPEEVGLAAPVKLLLETLPHELR
>NZ_CP013484.1|WP_005384506.1|1896605_1897325_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSEVTTNEYNEDGKLIRKIRSFVRREGRLTKGQESAMNECWPTMGIDFKAELLDWKEVFGNDNPVVLEIGFGMGASLVEMAKNAPEKNFIGIEVHSPGVGACLADAREAGITNLRVMCHDAVEVFEHMIPNGSLSTLQLFFPDPWHKKRHHKRRIVQLGFAEMVREKLIPNEGIFHMATDWENYAEHMIEVMNQAPGFENIAKDGDFVPRPDDRPLTKFEARGHRLGHGVWDIKYKRIA
>NZ_CP013484.1|WP_005384509.1|1895559_1896588_-|DNA-methylase
MYHYAILANPGHNRIYFDSAMTIACSELKAILASQGVDVTEIGSKDVGLPAALVFSCQEALTDEQARRIAASSIYYALFEVREDGLLRPVQAPVFNTFPESMSQILRYTGKTNEQFTRLMVNIGISASNTGSEQLTLMDPMCGKGTTLFEGLIHGLNVVGVEINAKWVQEIQTFIVKFMKNGRFKHKVSKEKRTAGGKKVADGFVVEAAANKEDYNQGNLQFMKLYSADTRIADQVVKKNSVDVMVSDLPYGVQHGSKNAKDSKLNRSPLELLKEALPAWKVVLKKQGSVVLSFNEFTLKWKDVAALFEEQGWKVLSEEPYIGYLHRVDQSINRNIIVAVKP
>NZ_CP013484.1|WP_005381007.1|1894540_1895461_-|glutaminase-B
MKPTVEILTDILAEVRPLIGQGKVADYIPALAKVPSNKLGIAVYTNEGEVIKAGDADEPFSIQSISKALSLTLAMCLYKQEEIWSRVGKEPSGQAFNSLIQLEMEQGIPRNPFINAGAIVVADLLQTRLSAPRQRLLEFVRQLSGDTHIVYDKVVAASEMMHGDRNAAIAYLMRSFGNFENEVIPVLQNYFHACALKMSCVDLAKTFSYLANKGTSVQTGKPVVSPVQTKQLNALLATCGLYDGAGEFAYRVGMPGKSGVGGGIIAVVPGEMTISVWSPELDPSGNSLAGTKALELLSERIGRSIF
>NZ_CP013484.1|WP_064368779.1|1893271_1894450_+|radical-SAM-family-heme-chaperone-HemW
MLTPPALSLYVHIPWCVQKCPYCDFNSHALKTEIPEEEYISALLEDLDTDIEKYRLNEAPRPLHSIFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVTRISIGVQSFEQQKLERLGRIHGQDEAVNAAQLAHQIGLNSFNLDLMHGLPDQSIEQALADLDKAIELAPPHLSWYQLTIEPNTMFYYKPPTLPDDDDLWDIFELGHQKLAAAGYVQYEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFTDGRIIRTTKVKHPRGYLAAYQNMVKPYLHTEHVVADEDRPFEFFMNRFRLIEACPKQDYVDTTGLPLSTIQETIDWAIEMGYLSETPTHWQITEKGKLFLNDLLEAFMAEESEE
>NZ_CP013484.1|WP_005381009.1|1892650_1893253_+|XTP/dITP-diphosphatase
MKKIVLATGNQGKVREMADLLSDFGFEVLAQSEFNVSEVAETGTTFIENAIIKARHAAQETGLPAIADDSGLEVDFLKGAPGIYSARYAGESASDQENLEKLLAAMEGVPEAERTARFHCVLVLMRHENDPTPIVCHGKWEGRILTEAHGENGFGYDPIFFVPEDNCASAELEPARKKQLSHRGKALKSLFAQLSEQVSQ
>NZ_CP013484.1|WP_005381010.1|1892100_1892532_+|DUF4426-domain-containing-protein
MSKWITALLISLLSLPSFADQFKNMKDIEVHYVAFNSTFLTPKVARSYDIKRNGYLAVVNISVLDRASLGKPALEAKIAGRAKNLIGQTQTLTFREVKEGNAIYYLAELPITHEETFTFDIDVKAGNKGSGKLKFTQKFYVEE
>NZ_CP013484.1|WP_064368778.1|1891681_1891972_+|YggU-family-protein
MSAAVWQDGEDIILKLYIQPKASRDKIIGLHGEELKIAITAPPVDGKANAHLTKFLAKQFKIAKGLVHIEKGELGRHKQIRIESPTQIPTEIKAII
>NZ_CP013484.1|WP_064368780.1|1901262_1902888_+|methyl-accepting-chemotaxis-protein
MKLKTQAYLLSAIILLALLALTATGLWTLRVASNLDNKARVTELFKSAYSILTEVEKIAIEGKMPEDEAKALATRLLRNNIYKDNEYVYVADENMMFIAAPLDPQLHGTSFHDFRDGSGNSVGQLILDVLGHKTGQIIEYTWSQKQADGSIEEKHSIAEKTPHWGWVVGTGIGFNEVNARFWSTAQWQLVLCLIIAGSILSGLIISIRKMLHLLGGEPNDVRKAVQAVAQGDIQTSFDTVAPRGSIYRAVQDMSQSLATMVTNLEKSMHALRAELSAVEARSNTIADLTVSQQQSTAMIATAMTEMASSANHVANSASDTANNTDEADKQSQHTQKLIHNTVENIQGLASQLNTASKAVADLDQDVNNIVKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQDSTKEIQYMISNLQEGSRNAIHTMEICAETSESTVTESKNASEALQQIVTALESITTMSQQIATAAAEQTQVSDDIALRINLIEESGGQLNSVVTESQSSTQSLASLANELEGWVNKFSVKH
>NZ_CP013484.1|WP_081048906.1|1903663_1905100_-|NAD-dependent-succinate-semialdehyde-dehydrogenase
MMQQIKNETLKSVFKQWSSEEGIVVINPATEQELIRLKPSTLDELDDLIGQCKTEQVRWAKLSAKERSRRLMGWYQLLLDNAEDIATIITLEQGKPLAESKGEVMYGASFVEWFSEEAKRAYGEVIPAPTTDRRLSAIRQPVGVCAAITPWNFPIAMITRKVAPALAAGCGMLIKPSELTPLTAIAVVELAYQAGIPKELLSVVVSEQAAEFGQVLSTDPRIQKISFTGSTRVGKILMKQASDSVKAVSMELGGNAPFIVFEDADLDAAAEGLVASKFRNAGQTCVCTNRLYVHKNVKQAFVDKVLSKLSKLKLGNGLEKGVTLGPVITMASKHRLEAVIDQAVQEGASIANSPQRRPGRFMEPVLLDSVTQNMSIVQQELFGPVLPIVTFENDDQVLEMANDTEYGLACYFYTNSLKRIVTFSEGLEYGMVGVNEGIISTEVAPFGGVKESGVGREGAKQGLDEYLETKYICLGGLS
>NZ_CP013484.1|WP_005381029.1|1911888_1913142_-|HD-GYP-domain-containing-protein
MAAIKLTVDRIQPGLHIRLPLKWNDHPFLLNSFKIKDQEQVEMIRHLGVKFVYFNPEQSDAVPLPVDQRQADRVTNEASLDHETQKMWQEKQNRIEKLSAYRRRVIQCEKEFERSLARMRSVMTKIRNRPTAAVDEAKLLIEDIVEKLMCDDNVTLHLMNGKNEFEDIYFHSLNVAVISMMIGRAKGYSAAQLKELSFSALFHDIGKIKIPTAILRKQLPLTEPETNYLKLHTKYGVDLASQIEAFPEVARIVIAQHHELRDGSGYPKGLKGDEINEFAQIIAVANAFDNLCHTPIVSDQKIPYTALSHLYKNCKHLYKEENLNILIKFMGVFPPGTVVQLSNNMVGLVISVNASHLLFPNVLVYDPSVPRTQAPIIDLASKDIKIVNAIHPSKLPDKVKEYLNPRSRISYFFDSDE
>NZ_CP013484.1|WP_064368781.1|1913272_1914271_-|LacI-family-DNA-binding-transcriptional-regulator
MARIKDVAELAGVNRSTVSRIINGEGKFREETRKKVEQAMAQLNYRPSAIARSLATSSSNMVGLLVTYYTGGFFGEMMEQVQTELDIHKKFLITAQGHHSAQGEKEAIQRFNDLRCDGYVLHSRYLSDDDLRELAKQPTPFVLLDRYVEGIEERCVTFNHHHASRIAVEHLLAGGHRKIACIAGPSQRHNSVLRKLGYIDAMKDAGIDIDESWCEEGNYGRQSGYDAMAAILQRHPDVTAVFSCSEEMTVGAMQYLHEHSISVPEQISLTSFDSVDLCESLYPTVSAVHFPISDMARVAVQTLMGLVTDQEVIDKPVFEAKLKIRKADRSLK
>NZ_CP013484.1|WP_005381046.1|1914375_1915131_-|chitin-disaccharide-deacetylase
MKVIFNADDFGLTRGVNNGIVKAHQQGVVHSTTMMVGMDAEQHALELARHNPDLKVGVHLRFTAGVPITKHRNLTNGRAHFINYDELWSKQDFETQVVYDEAKAQVEHFLSLGLELSHLDSHHHAHTHPQILPVIKEVANEYRVPLRGTGLCQESMTIRYIFTDEFYDQKVSLDGLMAHLLSLKADYDLVEVMCHPAEADQALILKSGYALQRELELQVLTSPILKEQLAHHGITVTDYSELVSTNQMVGV
>NZ_CP013484.1|WP_005381048.1|1915149_1916472_-|6-phospho-beta-glucosidase
MSREAIKLAIIGGGSSYTPELVEGVIKRLEYLPVKKIHFVDIESGAEKLEIIKGLAQRMVDKAGAKIEIKAGFDRRAAIKDADFVMTQFRVGGLAARANDERIPIKYDVIGQETTGPGGFAKALRTIPVILDICKDIEELAPNAWMLNFTNPAGLVSEAVSKYTKVKSIGLCNVPVSMEMMIAEMMECEPKELQLEFAGLNHLVWVHKAWLNGEDITQTVLEKVGDGANFSMKNIWEEPWDPAFLKALGAIPCPYHRYFYQTDAMLAEEKQSADEKGTRAEQVMETENALFKLYQDPTLDHKPKELEERGGAYYSDASLNLVDSIYNNRNSIHVVNVLNNGAINGLPDDAVIECSAVIGSWGAKPLAVGELSNNIKGLLHQVKAYEQLTIEAAVEGNYDKALMALTNNPLVPDIGRAKSILDDILAVNAPYLPQFKLTTL
>NZ_CP013484.1|WP_031777269.1|1916484_1916796_-|PTS-lactose/cellobiose-transporter-subunit-IIA
MEQELVVMEIICNAGEARSLSYEALRLSREQDFEAADEKLSQARECINKAHLIQTQLIEEDQGEGKVPMTLVMVHAQDHLMTTILAQEMAVEIVALNKKISNK
>NZ_CP013484.1|WP_005381064.1|1916847_1918182_-|PTS-sugar-transporter-subunit-IIC
MKLYDAIIGAVEKHIAPIAAKVGNQPHVRAMRDGFIVAMPFIIVGSFILIFAFPPFAEDTTFTFGRIWLDFATTHFDTIMMPYNMSMGIMTIFVSLGVAYSLAKAYKMDGITSAVLSLMSFLLIAAPAKDGALSMSHMGGTGIFTAVMCAFFSVELYRFMKKHNITIRMPEQVPPAIARSFEVLLPVLAIFITLYPLSLFVQTQYDMLIPDAVMAIFKPLISASNSLPAIIGALLLCQLLWFAGIHGAAIVVGLLSPIFLTNIGANIEAFVAGEPIPNVFTQPFWDFYIFIGGSGATLALVMLMSFSRSVHLKSIGRMSAVPGFFQINEPVIFGSPVVMNPTLFIPFVFAPVINATIAYFAVHVGFVGMGVATTPWTTPALIGASWGSGWTFAPVLLVIGLLILDLIIYFPFFKMFEKQMLEQELPTTKETKGDTQPSGEGVTA
>NZ_CP013484.1|WP_064368782.1|1918270_1918576_-|PTS-sugar-transporter-subunit-IIB
MKKILLCCSAGMSTSMLVKKMEQVAENKGIECKIDAMSVNAFEDAIKEYDVCLLGPQVRFQLEELRKTAQEHGKNIDAISPQHYGMMKGEEVLEQALELIN
>NZ_CP013484.1|WP_005381066.1|1918823_1920107_+|polysaccharide-deacetylase-family-protein
MKFNKLAIATLVSAALSQHSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFTENLSVLAKYLPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDDLKPWEPGYVCDTSNPSNSVKAAIEVQNILANNGYQTHGWDVDWAPENWGIEMPANSLTEAEAFLGYVDSALNTCAPTTINPINSKAQEFPCGTPLHADKVIVLTHEFLFEDGKRGMGATQNLPKLAKFIQLAKQAGYDFDTMDNYTPNWQVGHNYDAGDYVLHLGTVYQAVTNHTAQQDWAPSPTSSLWTNADPATNWTQNVSYKQGDVVTYQGLRYLVDVPHVSQADWTPNTQNTLFTAL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_CP013484.1	1900397-1900435	0	1.0
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_CP013484.1	2228894-2228932	0	1.0
NZ_CP013484_1	1.2\|1900840\|74\|NZ_CP013484\|PILER-CR	1900840-1900913	74	NZ_CP013484.1	1900483-1900556	15	0.797

1. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to position: 1900397-1900435, mismatch: 0, identity: 1.0

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccattc	Protospacer
***************************************

2. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to position: 2228894-2228932, mismatch: 0, identity: 1.0

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccattc	Protospacer
***************************************

3. spacer 1.2|1900840|74|NZ_CP013484|PILER-CR matches to position: 1900483-1900556, mismatch: 15, identity: 0.797

gtgtcggtggttcgattccgcctcgaggcaccatatctggtgcacttgcttcataagcaa	CRISPR spacer
gtgtcggtggttcgattccgcctcgaggcaccatatttggtgcacttgcttcataagcaa	Protospacer
************************************.***********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	296497-296535	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_LN868946	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence	103819-103857	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	KU052038	Escherichia phage SerU-LTIIb, partial genome	1162-1200	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	KU052038	Escherichia phage SerU-LTIIb, partial genome	3068-3106	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	LN997803	Escherichia coli phage phi467	15126-15164	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	52078-52116	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	52084-52122	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	52089-52127	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	52088-52126	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NC_021742	Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence	35428-35466	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	MH791411	UNVERIFIED: Escherichia phage Ecwhy_1, complete genome	13645-13683	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	MH494197	Escherichia phage CMSTMSU, complete genome	196772-196810	2	0.949
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_CP054057	Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence	85817-85855	3	0.923
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NZ_CP023526	Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence	1925-1963	3	0.923
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	KY653118	Morganella phage IME1369_01, complete genome	698-736	4	0.897
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NC_049942	Escherichia phage JLK-2012, complete sequence	23522-23560	6	0.846
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	LC494302	Escherichia phage SP27 DNA, complete genome	76609-76647	7	0.821
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	NC_027364	Escherichia phage PBECO 4, complete genome	207832-207870	7	0.821
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	LT603033	Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I	17115-17153	7	0.821
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	MK817115	Escherichia phage vB_EcoM_phAPEC6, complete genome	52945-52983	8	0.795
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	MH383160	Escherichia phage UB, complete genome	272124-272162	8	0.795
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	MK327931	Escherichia phage vB_EcoM_G17, complete genome	77929-77967	8	0.795
NZ_CP013484_1	1.1\|1900754\|39\|NZ_CP013484\|PILER-CR	1900754-1900792	39	KM507819	Escherichia phage 121Q, complete genome	77936-77974	9	0.769

1. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatat	Protospacer
************************************* .

2. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NZ_LN868946 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatca	Protospacer
*************************************.

3. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to KU052038 (Escherichia phage SerU-LTIIb, partial genome) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatat	Protospacer
************************************* .

4. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to KU052038 (Escherichia phage SerU-LTIIb, partial genome) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatat	Protospacer
************************************* .

5. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to LN997803 (Escherichia coli phage phi467) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatat	Protospacer
************************************* .

6. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccactt	Protospacer
************************************.*.

7. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccactt	Protospacer
************************************.*.

8. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccactt	Protospacer
************************************.*.

9. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccactt	Protospacer
************************************.*.

10. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagccggcaccaatc	Protospacer
***************************.******** **

11. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to MH791411 (UNVERIFIED: Escherichia phage Ecwhy_1, complete genome) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcacaaatc	Protospacer
********************************** * **

12. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to MH494197 (Escherichia phage CMSTMSU, complete genome) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcacaaatc	Protospacer
********************************** * **

13. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 3, identity: 0.923

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccaaat	Protospacer
************************************  .

14. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NZ_CP023526 (Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.923

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccagaa	Protospacer
************************************

15. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to KY653118 (Morganella phage IME1369_01, complete genome) position: , mismatch: 4, identity: 0.897

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgactccggtagccggcaccatat	Protospacer
******************.********.********* .

16. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 6, identity: 0.846

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
atcaggtcgccagttcgattccggtagccggcaccatat	Protospacer
* .*****.******************.********* .

17. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 7, identity: 0.821

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaaggtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. ******************************* *  .

18. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 7, identity: 0.821

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaaggtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. ******************************* *  .

19. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.821

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaaggtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. ******************************* *  .

20. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to MK817115 (Escherichia phage vB_EcoM_phAPEC6, complete genome) position: , mismatch: 8, identity: 0.795

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaatgtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. * ***************************** *  .

21. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 8, identity: 0.795

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaatgtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. * ***************************** *  .

22. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 8, identity: 0.795

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaatgtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. * ***************************** *  .

23. spacer 1.1|1900754|39|NZ_CP013484|PILER-CR matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 9, identity: 0.769

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaatgtcaccagttcaattccggtagtcggcacaaaat	Protospacer
.. * ***********.***************** *  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

351262 : 404956

Vibrio_phage(22.22%)

capsid,portal,integrase,tail,terminase,tRNA

attL 374590:374607|attR 412465:412482

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005395892.1\|351262_353191_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	5.7e-127	37.3
WP_080276913.1\|353194_353746_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.5e-13	35.1
WP_005377932.1\|353866_354061_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_004727974.1\|354101_354455_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_005377919.1\|354644_354962_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_005377917.1\|355328_356138_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_017821820.1\|356130_356316_-	hypothetical protein	NA	NA	NA	NA
WP_005377913.1\|356586_357375_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_064368095.1\|357625_360004_+	MMPL family transporter	NA	NA	NA	NA
WP_064368097.1\|360022_360814_+	outer membrane lipoprotein-sorting protein	NA	NA	NA	NA
WP_064368098.1\|360824_362000_+	hypothetical protein	NA	NA	NA	NA
WP_005385470.1\|362191_363175_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	4.3e-38	39.9
WP_064368100.1\|363193_365599_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	2.3e-08	26.5
WP_064368103.1\|365813_366695_-	AEC family transporter	NA	NA	NA	NA
WP_005377899.1\|367229_367526_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	2.7e-12	38.9
WP_025766820.1\|367648_368428_-	phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_021707633.1\|368743_369394_+	thiopurine S-methyltransferase	NA	NA	NA	NA
WP_064368105.1\|369466_370642_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_005377892.1\|370785_371673_-	cytidine deaminase	NA	NA	NA	NA
WP_005377888.1\|372103_372781_-	LrgB family protein	NA	NA	NA	NA
WP_005397786.1\|372782_373157_-	CidA/LrgA family protein	NA	NA	NA	NA
WP_064368108.1\|373212_374634_-	exodeoxyribonuclease I	NA	NA	NA	NA
374590:374607	attL	NA	NA	NA	NA
WP_064368110.1\|374814_376011_+\|integrase	site-specific integrase	A0A1U9AJ52	Stx1_converting_phage	1.2e-103	49.3
WP_064368112.1\|376149_376566_+	hypothetical protein	NA	NA	NA	NA
WP_064368114.1\|377153_377546_+	hypothetical protein	NA	NA	NA	NA
WP_064368117.1\|377682_378897_+	SIR2 family protein	NA	NA	NA	NA
WP_064368119.1\|379052_379316_+	hypothetical protein	NA	NA	NA	NA
WP_064368121.1\|379472_380909_+	hypothetical protein	NA	NA	NA	NA
WP_064368123.1\|381012_381318_-	hypothetical protein	NA	NA	NA	NA
WP_020333055.1\|381383_381542_-	hypothetical protein	NA	NA	NA	NA
WP_064368125.1\|381516_381918_-	hypothetical protein	NA	NA	NA	NA
WP_064368127.1\|381914_382157_-	hypothetical protein	NA	NA	NA	NA
WP_025766807.1\|382319_382592_-	hypothetical protein	NA	NA	NA	NA
WP_025766806.1\|382858_383521_-	LexA family transcriptional regulator	K7PLZ5	Enterobacterial_phage	3.3e-42	44.9
WP_025766805.1\|383636_383846_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_053807278.1\|383898_384447_+	hypothetical protein	NA	NA	NA	NA
WP_064368129.1\|385416_386148_+	ATP-binding protein	A0A1W6JP39	Morganella_phage	5.8e-32	37.8
WP_064368131.1\|386148_386730_+	hypothetical protein	NA	NA	NA	NA
WP_064368133.1\|387300_388299_+	hypothetical protein	NA	NA	NA	NA
WP_064368135.1\|388298_389489_+	hypothetical protein	NA	NA	NA	NA
WP_025634229.1\|389490_390156_+	hypothetical protein	NA	NA	NA	NA
WP_064368136.1\|390346_390634_+	hypothetical protein	NA	NA	NA	NA
WP_064368139.1\|390599_391058_+	hypothetical protein	A0A2I7R3H9	Vibrio_phage	7.4e-17	36.1
WP_025766795.1\|391099_391285_+	hypothetical protein	M4M9I7	Vibrio_phage	4.0e-06	48.2
WP_064368140.1\|391612_392827_+\|integrase	tyrosine-type recombinase/integrase	A0A067ZJC5	Vibrio_phage	9.0e-54	32.0
WP_064368144.1\|393275_393845_+\|terminase	terminase small subunit	B0ZSE9	Halomonas_phage	1.8e-25	37.5
WP_081048879.1\|393855_395790_+\|terminase	phage terminase large subunit family protein	A2I2W6	Vibrio_virus	4.9e-211	58.2
WP_064368146.1\|395783_396311_+	hypothetical protein	NA	NA	NA	NA
WP_064368148.1\|396310_397870_+\|portal	phage portal protein	A0A1W6JT60	Escherichia_phage	3.9e-118	44.9
WP_064368151.1\|397835_399809_+\|capsid	phage major capsid protein	A0A1W6JT82	Escherichia_phage	1.7e-163	49.5
WP_025632827.1\|399868_400060_+	hypothetical protein	NA	NA	NA	NA
WP_025766788.1\|400052_400331_+	ATP-binding sugar transporter from pro-phage family protein	NA	NA	NA	NA
WP_064368153.1\|400327_400960_+\|tail	phage tail protein	K7PKQ5	Enterobacteria_phage	5.4e-26	37.3
WP_064368155.1\|400949_401396_+	hypothetical protein	NA	NA	NA	NA
WP_029822208.1\|401398_401902_+\|tail	tail fiber protein	Q687F6	Enterobacteria_phage	9.2e-37	51.7
WP_064368158.1\|401905_402376_+	hypothetical protein	NA	NA	NA	NA
WP_025500496.1\|402441_402726_+\|tail	phage tail protein	NA	NA	NA	NA
WP_064368160.1\|402706_404956_+	hypothetical protein	A0A2I7R469	Vibrio_phage	1.1e-28	25.8
412465:412482	attR	NA	NA	NA	NA

DBSCAN-SWA_2

511211 : 516178

Vibrio_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064368257.1\|511211_511889_-	helix-turn-helix domain-containing protein	A0A1V0E8B5	Vibrio_phage	3.5e-71	59.8
WP_064368258.1\|511991_512216_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_064368259.1\|512235_512700_+	hypothetical protein	K7PJS5	Enterobacterial_phage	1.3e-21	50.0
WP_064368260.1\|512696_512918_+	hypothetical protein	NA	NA	NA	NA
WP_064368262.1\|512993_513953_+	hypothetical protein	A0A1I9KG10	Aeromonas_phage	7.9e-29	39.9
WP_064368264.1\|513952_514606_+	hypothetical protein	B5WZY0	Pseudomonas_phage	4.0e-16	30.8
WP_064368267.1\|514602_514965_+	hypothetical protein	NA	NA	NA	NA
WP_064368269.1\|514957_515608_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	3.2e-21	37.4
WP_064368273.1\|515776_516178_+	recombination protein NinG	A0A2I7R7L7	Vibrio_phage	4.1e-19	46.9

DBSCAN-SWA_3

535604 : 544026

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064368323.1\|535604_537485_+	Ig-like domain-containing protein	A0A2I7RBS5	Vibrio_phage	5.9e-12	29.7
WP_064368325.1\|537474_537891_+	hypothetical protein	NA	NA	NA	NA
WP_064368327.1\|537899_538946_+	hypothetical protein	A0A2D0YKL0	Vibrio_phage	3.5e-14	38.2
WP_064368329.1\|538988_539543_-	hypothetical protein	NA	NA	NA	NA
WP_064368331.1\|539704_540031_+	hypothetical protein	NA	NA	NA	NA
WP_064368333.1\|540031_540886_-	N-6 DNA methylase	A0A2I7RHV5	Vibrio_phage	5.6e-18	32.7
WP_064368334.1\|541218_541497_+	hypothetical protein	NA	NA	NA	NA
WP_064368336.1\|541536_541818_-	hypothetical protein	A0A0N9STP5	Staphylococcus_phage	3.0e-05	35.6
WP_155604202.1\|542055_542229_+	hypothetical protein	NA	NA	NA	NA
WP_064368337.1\|542228_542600_+	type II toxin-antitoxin system death-on-curing family toxin	A0A222YZ88	Escherichia_phage	4.4e-12	33.6
WP_064368340.1\|542949_544026_+	type I restriction enzyme HsdR N-terminal domain-containing protein	A0A1S5SAB0	Streptococcus_phage	7.5e-68	41.0

DBSCAN-SWA_4

1349874 : 1374884

Vibrio_phage(96.88%)

plate,capsid,portal,head,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064368655.1\|1349874_1351515_-	hypothetical protein	A0A160DHT6	Vibrio_phage	1.9e-208	66.0
WP_048625787.1\|1351511_1351985_-	hypothetical protein	R9TPX7	Vibrio_phage	2.5e-36	55.5
WP_064368656.1\|1351978_1352869_-	hypothetical protein	R9TRQ4	Vibrio_phage	7.5e-90	57.5
WP_064368657.1\|1352865_1353267_-	hypothetical protein	NA	NA	NA	NA
WP_064368658.1\|1353270_1355049_-\|tail	phage tail protein	A0A160DJT8	Vibrio_phage	1.0e-85	55.3
WP_042522470.1\|1355055_1355652_-	phage protein	R9TQ05	Vibrio_phage	5.7e-70	67.0
WP_064368659.1\|1355644_1356850_-\|plate	baseplate J/gp47 family protein	R9TRT3	Vibrio_phage	2.4e-160	69.2
WP_017821183.1\|1356846_1357188_-	DUF2590 family protein	R9TMS7	Vibrio_phage	1.0e-34	70.0
WP_064368660.1\|1357177_1359157_-\|tail	phage tail tape measure protein	R9TRA2	Vibrio_phage	2.9e-211	60.2
WP_064368661.1\|1359372_1359654_-	hypothetical protein	A0A160DHS7	Vibrio_phage	4.1e-26	66.3
WP_119184768.1\|1359646_1359901_-	hypothetical protein	U3PCH1	Vibrio_phage	5.3e-25	73.0
WP_064368662.1\|1359857_1360199_-	hypothetical protein	R9TNR2	Vibrio_phage	5.8e-35	69.0
WP_017635441.1\|1360173_1360764_-	lysozyme	A0A2I7RNI5	Vibrio_phage	4.2e-65	59.7
WP_017635442.1\|1360750_1360960_-	hypothetical protein	A0A2I7RNJ2	Vibrio_phage	4.4e-17	58.8
WP_017635443.1\|1360964_1361171_-	TraR/DksA C4-type zinc finger protein	A0A2I7RNJ6	Vibrio_phage	6.5e-13	52.9
WP_017821175.1\|1361191_1361644_-	DUF2597 family protein	U3PCG7	Vibrio_phage	4.4e-54	67.1
WP_064368663.1\|1361647_1362778_-	DUF2586 family protein	U3PB71	Vibrio_phage	1.6e-124	62.5
WP_064368664.1\|1362780_1363440_-	phage virion morphogenesis protein	U3PDG7	Vibrio_phage	6.8e-80	71.6
WP_053808827.1\|1363432_1363921_-\|tail	phage tail protein	R9TRS7	Vibrio_phage	1.6e-46	55.1
WP_042522478.1\|1363917_1364382_-\|head	head completion/stabilization protein	U3PFL1	Vibrio_phage	6.5e-53	69.5
WP_017821172.1\|1364490_1365207_-\|terminase	terminase	A0A2I7RNJ0	Vibrio_phage	8.1e-87	68.7
WP_017821171.1\|1365199_1366222_-\|capsid	phage major capsid protein, P2 family	R9TPZ5	Vibrio_phage	3.4e-110	62.2
WP_064368665.1\|1366221_1367088_-\|capsid	GPO family capsid scaffolding protein	A0A2I7RNH1	Vibrio_phage	1.9e-93	65.7
WP_064368666.1\|1367253_1369041_+\|terminase	terminase	A0A2I7RNI3	Vibrio_phage	6.0e-272	79.8
WP_064368667.1\|1369037_1370069_+\|portal	phage portal protein	A0A2I7RNI9	Vibrio_phage	4.0e-151	76.0
WP_064368668.1\|1370134_1370386_+	ogr/Delta-like zinc finger family protein	R9TNQ2	Vibrio_phage	1.3e-31	77.1
WP_025517538.1\|1370380_1370599_-	hypothetical protein	Q8HA64	Vibrio_phage	1.1e-13	56.9
WP_064368669.1\|1370726_1372607_-	replication endonuclease	A0A218M4H2	Erwinia_phage	3.3e-63	37.7
WP_031821628.1\|1372612_1372849_-	hypothetical protein	NA	NA	NA	NA
WP_064368670.1\|1372845_1373073_-	hypothetical protein	U3PIK2	Vibrio_phage	9.6e-18	52.0
WP_064368671.1\|1373072_1373273_-	hypothetical protein	A0A2I7RNH0	Vibrio_phage	2.6e-11	67.3
WP_064368672.1\|1373301_1373841_-	phage regulatory CII family protein	A0A2I7RNI1	Vibrio_phage	5.8e-53	59.2
WP_045607456.1\|1373955_1374168_-	hypothetical protein	U3PFJ1	Vibrio_phage	3.0e-13	52.9
WP_064368673.1\|1374260_1374884_+	helix-turn-helix domain-containing protein	A0A2I7RNF9	Vibrio_phage	3.9e-37	39.3

DBSCAN-SWA_5

1820285 : 1837460

uncultured_Mediterranean_phage(18.18%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005383801.1\|1820285_1822868_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	5.9e-79	38.1
WP_005383799.1\|1823010_1823478_-	recombination regulator RecX	NA	NA	NA	NA
WP_005380874.1\|1823605_1824649_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	8.1e-112	61.0
WP_017633544.1\|1824849_1825332_-	nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	1.8e-26	48.1
WP_005380877.1\|1825416_1827978_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	7.8e-31	23.5
WP_064368766.1\|1828060_1829047_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	6.9e-36	35.2
WP_017633546.1\|1829127_1830051_-	peptidoglycan DD-metalloendopeptidase family protein	D7RWE0	Brochothrix_phage	4.1e-06	35.2
WP_005380892.1\|1830064_1830691_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.3e-37	54.5
WP_005380894.1\|1830690_1831467_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.3e-66	49.4
WP_064368767.1\|1831466_1832510_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_005380896.1\|1832555_1833032_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_017821625.1\|1833046_1833754_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	A0A2H4UTB4	Bodo_saltans_virus	9.1e-06	23.6
WP_005380907.1\|1833755_1834037_-	cell division protein FtsB	NA	NA	NA	NA
WP_005383785.1\|1834439_1835741_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	4.1e-137	60.6
WP_021034029.1\|1835819_1837460_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.1e-154	52.1

DBSCAN-SWA_6

3092766 : 3099550

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005383771.1\|3092766_3093906_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.5e-63	42.0
WP_064369028.1\|3093923_3095174_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.5e-99	48.5
WP_005381578.1\|3095380_3095830_+	transcriptional regulator NrdR	NA	NA	NA	NA
WP_064369029.1\|3095837_3096965_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	1.2e-44	34.3
WP_005383626.1\|3096973_3097627_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.1e-32	37.0
WP_005381573.1\|3097800_3098910_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.2e-65	39.8
WP_005381572.1\|3099079_3099550_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-32	48.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP013485

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1182462 : 1225278

Vibrio_phage(36.36%)

transposase,tail,plate,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005374094.1\|1182462_1184493_-	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	4.1e-27	30.9
WP_064369436.1\|1186194_1186941_-	LexA family transcriptional regulator	A5X9F5	Aeromonas_virus	1.2e-24	32.7
WP_064369437.1\|1187143_1187362_+	helix-turn-helix domain-containing protein	A0A2I7S995	Vibrio_phage	7.1e-18	63.6
WP_064369438.1\|1187361_1189446_+\|transposase	Mu transposase C-terminal domain-containing protein	M4M9R2	Vibrio_phage	2.9e-60	28.4
WP_064369439.1\|1189449_1190373_+	AAA family ATPase	A0A2P9JZG8	Alteromonadaceae_phage	1.6e-34	30.5
WP_064369440.1\|1190374_1190809_+	hypothetical protein	NA	NA	NA	NA
WP_031427044.1\|1190799_1191045_+	hypothetical protein	NA	NA	NA	NA
WP_064369441.1\|1191072_1191273_+	ANR family transcriptional regulator	NA	NA	NA	NA
WP_064369442.1\|1191269_1191605_+	hypothetical protein	NA	NA	NA	NA
WP_064369443.1\|1191591_1192212_+	DUF3164 family protein	A0A2D1GNM4	Pseudomonas_phage	7.1e-47	46.0
WP_172797325.1\|1192233_1193268_+	nucleoid-associated protein	A0A1V0E8C0	Vibrio_phage	1.4e-55	37.4
WP_064369445.1\|1193264_1193513_+	hypothetical protein	NA	NA	NA	NA
WP_064369446.1\|1193631_1194009_+	hypothetical protein	A0A2I7RZB2	Vibrio_phage	1.3e-35	60.7
WP_064369447.1\|1193998_1194451_+	hypothetical protein	M4MHH2	Vibrio_phage	5.6e-33	46.5
WP_064369448.1\|1194441_1195425_+	hypothetical protein	A0A2I7RWK0	Vibrio_phage	3.2e-17	50.0
WP_064369449.1\|1195421_1195658_+	SEC-C domain-containing protein	NA	NA	NA	NA
WP_064369450.1\|1195654_1195867_+	hypothetical protein	M4MCS5	Vibrio_phage	2.6e-09	51.5
WP_064369451.1\|1195869_1196091_+	hypothetical protein	NA	NA	NA	NA
WP_064369453.1\|1196671_1196878_+	hypothetical protein	NA	NA	NA	NA
WP_155604267.1\|1196862_1197456_+	hypothetical protein	NA	NA	NA	NA
WP_064369455.1\|1197581_1198016_+	regulatory protein GemA	NA	NA	NA	NA
WP_064369456.1\|1198008_1198284_+	hypothetical protein	NA	NA	NA	NA
WP_149150989.1\|1198243_1198429_+	hypothetical protein	NA	NA	NA	NA
WP_155604268.1\|1198482_1198659_-	hypothetical protein	NA	NA	NA	NA
WP_064369457.1\|1198661_1198865_-	hypothetical protein	NA	NA	NA	NA
WP_064369458.1\|1198861_1199758_-	peptidoglycan-binding protein	D6QWP0	uncultured_phage	1.5e-34	56.0
WP_064369459.1\|1199769_1200948_-\|plate	baseplate J/gp47 family protein	A0A2K9V320	Faecalibacterium_phage	1.3e-28	31.0
WP_064369460.1\|1200944_1201967_-	hypothetical protein	A0A0C5AJ59	Bacteriophage	5.5e-12	25.0
WP_064369461.1\|1201954_1202188_-\|tail	tail protein X	NA	NA	NA	NA
WP_064369462.1\|1202190_1202586_-\|tail	phage tail protein	NA	NA	NA	NA
WP_064369463.1\|1202582_1203218_-	hypothetical protein	NA	NA	NA	NA
WP_064369464.1\|1203214_1203853_-	hypothetical protein	NA	NA	NA	NA
WP_064369465.1\|1203986_1204547_+	DUF3486 family protein	NA	NA	NA	NA
WP_064369466.1\|1204556_1204739_+	hypothetical protein	NA	NA	NA	NA
WP_064369467.1\|1204710_1206387_+\|terminase	phage terminase large subunit	A0A0N9RZA7	Paenibacillus_phage	1.1e-25	25.7
WP_081048930.1\|1206389_1207181_+\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_064369468.1\|1207309_1207654_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_064369469.1\|1207721_1209563_+	Ig-like domain-containing protein	A0A1W6JT53	Escherichia_phage	4.9e-27	29.9
WP_064369470.1\|1209565_1210078_+\|tail	phage major tail tube protein	NA	NA	NA	NA
WP_064369471.1\|1210088_1211012_+	hypothetical protein	NA	NA	NA	NA
WP_064369472.1\|1211080_1211476_+	hypothetical protein	NA	NA	NA	NA
WP_064369473.1\|1211475_1212354_+	hypothetical protein	NA	NA	NA	NA
WP_064369474.1\|1212423_1213440_+\|capsid	major capsid protein	NA	NA	NA	NA
WP_024701758.1\|1213442_1213868_+	hypothetical protein	NA	NA	NA	NA
WP_064369475.1\|1213809_1214901_+	DUF935 family protein	F8TVC4	EBPR_siphovirus	2.7e-09	26.1
WP_064369476.1\|1214888_1216214_+\|capsid	minor capsid protein	C9DGN7	Escherichia_phage	6.0e-11	30.4
WP_064369477.1\|1216213_1216606_+	hypothetical protein	NA	NA	NA	NA
WP_064369479.1\|1216993_1217428_-	hypothetical protein	A0A1V0E842	Vibrio_phage	4.2e-54	69.5
WP_155604269.1\|1217493_1217655_-	hypothetical protein	NA	NA	NA	NA
WP_064369480.1\|1217895_1218078_+	site-specific DNA-methyltransferase	A5X9I4	Aeromonas_virus	4.1e-11	55.0
WP_064369481.1\|1218115_1220839_-\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_064369482.1\|1220980_1221424_-	hypothetical protein	NA	NA	NA	NA
WP_081048931.1\|1221544_1223848_+\|tail	phage tail protein I	D5LGZ2	Escherichia_phage	2.3e-13	35.9
WP_064369483.1\|1223850_1225278_+\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	8.2e-14	31.8

Anti-CRISPR protein detection

Acr_ID: NZ_CP013485.1|WP_009705061.1|1182090_1182453_-|ATPase

Click the colored protein region to show detailed information

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage
NZ_CP013485.1\|WP_009705061.1\|1182090_1182453_-\|ATPase	1182090_1182453_- Protein sequences of NZ_CP013485.1\|WP_009705061.1\|1182090_1182453_-\|ATPase >NZ_CP013485.1\|WP_009705061.1\|1182090_1182453_-\|ATPase MKKLTLLSLSAVGATALLAIGLSSSSLANNQGFPLVDERQDQAEQQPARYFVKYHEGKESEVRALLRQHNIEVVDALVKQHVLVVVGEQAEVDKLADHDAVEYTEQEPTRKLLSNGTTLQ	120 aa aa	NA	NA	NA	No	NA

3. NZ_CP013486

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 16192

Escherichia_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064369701.1\|1767_2166_+	hypothetical protein	NA	NA	NA	NA
WP_155604282.1\|2527_2671_+	hypothetical protein	NA	NA	NA	NA
WP_081048945.1\|2684_2933_+	hypothetical protein	NA	NA	NA	NA
WP_064369703.1\|3147_3396_+	hypothetical protein	NA	NA	NA	NA
WP_064369704.1\|3580_4087_+	hypothetical protein	NA	NA	NA	NA
WP_172797329.1\|4152_4326_+	hypothetical protein	NA	NA	NA	NA
WP_155604283.1\|4398_4698_+	hypothetical protein	NA	NA	NA	NA
WP_064369707.1\|4702_5164_+	hypothetical protein	NA	NA	NA	NA
WP_064369708.1\|5342_5765_+	hypothetical protein	NA	NA	NA	NA
WP_155604284.1\|5770_5920_+	hypothetical protein	NA	NA	NA	NA
WP_064369709.1\|6073_6307_-	hypothetical protein	NA	NA	NA	NA
WP_064369710.1\|6543_7341_+	hypothetical protein	NA	NA	NA	NA
WP_064369711.1\|8014_8575_-	molecular chaperone TorD family protein	A0A077SLS7	Escherichia_phage	3.8e-07	29.2
WP_064369712.1\|8574_9375_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_064369713.1\|9401_10202_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_064369714.1\|10203_10827_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.6e-59	55.6
WP_064369715.1\|10823_13190_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	7.0e-143	38.2
WP_064369716.1\|13629_14061_+	hypothetical protein	NA	NA	NA	NA
WP_064369718.1\|14530_16192_+	Eco57I restriction-modification methylase domain-containing protein	R4TFP1	Halovirus	1.0e-15	22.0

DBSCAN-SWA_2

23306 : 24803

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064369726.1\|23306_24803_-	hypothetical protein	Q71T61	Escherichia_phage	3.0e-152	56.9

DBSCAN-SWA_3

27866 : 33882

uncultured_Caudovirales_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064369730.1\|27866_29180_-	PAS domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	9.5e-17	39.9
WP_064369731.1\|29543_29864_+	DUF2623 family protein	NA	NA	NA	NA
WP_025558929.1\|30590_31229_-	hypothetical protein	A0A2I7RNS2	Vibrio_phage	7.3e-55	50.2
WP_064369733.1\|31206_31449_-	hypothetical protein	NA	NA	NA	NA
WP_064369734.1\|31441_31738_-	HU family DNA-binding protein	NA	NA	NA	NA
WP_064369735.1\|31737_32061_-	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	1.7e-07	40.5
WP_064369736.1\|32039_32309_-	hypothetical protein	NA	NA	NA	NA
WP_017634077.1\|32428_33127_-	hypothetical protein	NA	NA	NA	NA
WP_064369737.1\|33153_33882_-	VRR-NUC domain-containing protein	Q71T85	Escherichia_phage	3.7e-18	40.4

DBSCAN-SWA_4

37362 : 37902

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064369743.1\|37362_37902_-	single-stranded DNA-binding protein	R9TR60	Vibrio_phage	3.4e-61	69.1

DBSCAN-SWA_5

43900 : 74868

Escherichia_phage(26.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064369749.1\|43900_44854_-	hypothetical protein	A0A1B0V7I1	Salmonella_phage	6.0e-61	40.5
WP_064369750.1\|44867_46541_-	hypothetical protein	Q71TR7	Escherichia_phage	2.5e-110	40.2
WP_064369751.1\|46922_53642_+	N-6 DNA methylase	Q1MVN7	Enterobacteria_phage	3.9e-292	32.0
WP_054579116.1\|53697_54123_+	hypothetical protein	NA	NA	NA	NA
WP_017634062.1\|54695_54935_+	hypothetical protein	NA	NA	NA	NA
WP_054579117.1\|54938_55712_+	ParA family protein	F0PIG8	Enterococcus_phage	1.4e-12	26.3
WP_064369753.1\|55708_56626_+	ParB/RepB/Spo0J family partition protein	S5VTK0	Leptospira_phage	4.3e-08	30.4
WP_017634059.1\|56647_56980_-	hypothetical protein	NA	NA	NA	NA
WP_064369755.1\|57422_58517_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	2.4e-146	69.6
WP_064369756.1\|58585_58855_-	hypothetical protein	NA	NA	NA	NA
WP_033905424.1\|59530_60214_-	hypothetical protein	NA	NA	NA	NA
WP_064369757.1\|60282_65076_-	hypothetical protein	Q1MVM7	Enterobacteria_phage	1.2e-19	32.9
WP_033905426.1\|65072_65699_-	hypothetical protein	O21969	Escherichia_phage	6.3e-19	37.3
WP_136976912.1\|65691_66105_-	hypothetical protein	A0A077SK09	Escherichia_phage	9.6e-08	35.8
WP_017634052.1\|66101_66425_-	hypothetical protein	Q37876	Escherichia_phage	4.1e-06	36.4
WP_064369758.1\|66826_69454_-	hypothetical protein	A0A0D4DBD6	Vibrio_phage	7.7e-58	54.1
WP_064369759.1\|69548_70667_-	hypothetical protein	A0A1B0XUH9	Freshwater_phage	6.2e-17	32.1
WP_064369760.1\|70738_71998_-	hypothetical protein	X2L0B8	Vibrio_phage	3.3e-06	46.3
WP_033905433.1\|71997_72459_-	hypothetical protein	NA	NA	NA	NA
WP_054579128.1\|72515_73355_-	hypothetical protein	A0A1B0V7F2	Salmonella_phage	1.5e-36	40.3
WP_064369761.1\|73470_74868_-	hypothetical protein	A0A1B0VAD6	Salmonella_phage	4.5e-73	34.6

DBSCAN-SWA_6

78016 : 79604

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033905439.1\|78016_78829_-	hypothetical protein	A0A222YZ63	Escherichia_phage	2.1e-46	39.0
WP_054866402.1\|78828_79344_-	hypothetical protein	A0A222YY05	Escherichia_phage	7.8e-31	40.4
WP_081048946.1\|79355_79604_-	hypothetical protein	Q71TN7	Escherichia_phage	1.7e-12	45.7

DBSCAN-SWA_7

83525 : 95047

Escherichia_phage(55.56%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081048941.1\|83525_84857_+	Fic family protein	A0A1V0E025	Clostridioides_phage	3.9e-26	31.3
WP_064369766.1\|84922_85420_-	hypothetical protein	NA	NA	NA	NA
WP_064369767.1\|85433_86042_-	hypothetical protein	Q1MVJ8	Enterobacteria_phage	6.4e-24	34.2
WP_064369768.1\|86051_86720_-	hypothetical protein	A0A222YXT7	Escherichia_phage	2.6e-10	30.9
WP_064369769.1\|86742_88317_-	hypothetical protein	Q71TB2	Escherichia_phage	1.7e-105	41.9
WP_064369770.1\|88309_88741_-	hypothetical protein	NA	NA	NA	NA
WP_064369771.1\|88787_90437_-	hypothetical protein	A0A222YWC7	Escherichia_phage	1.5e-64	32.0
WP_017635640.1\|90719_91070_-	hypothetical protein	NA	NA	NA	NA
WP_064369772.1\|91069_91621_-	N-acetylmuramoyl-L-alanine amidase	A0A2I7RXW8	Vibrio_phage	1.3e-28	43.9
WP_172797331.1\|91854_92034_-	hypothetical protein	NA	NA	NA	NA
WP_064369774.1\|92246_93002_-	hypothetical protein	NA	NA	NA	NA
WP_064369775.1\|93011_93296_-	PAAR domain-containing protein	Q1MVI7	Enterobacteria_phage	7.3e-07	34.4
WP_064369776.1\|93302_94073_-	hypothetical protein	A0A222YWF1	Escherichia_phage	3.2e-20	38.3
WP_064369777.1\|94069_95047_-	hypothetical protein	A0A222YXZ0	Escherichia_phage	9.2e-33	28.2

DBSCAN-SWA_8

120775 : 128077

Escherichia_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064369805.1\|120775_121246_-	hypothetical protein	A0A1W6UFZ4	Vibrio_phage	3.5e-54	67.3
WP_064369807.1\|121929_122382_+	hypothetical protein	NA	NA	NA	NA
WP_064369809.1\|122978_123557_+	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_064369810.1\|123841_124351_-	hypothetical protein	A0A222YXU3	Escherichia_phage	7.9e-36	46.8
WP_064369811.1\|124347_125499_-	hypothetical protein	Q71T88	Escherichia_phage	5.7e-74	50.2
WP_024703879.1\|125502_125826_-	hypothetical protein	A0A222YYR0	Escherichia_phage	1.4e-14	40.2
WP_064369812.1\|125818_126451_-	hypothetical protein	A0A222YZ79	Escherichia_phage	3.2e-18	29.6
WP_081048944.1\|126548_127214_-	hypothetical protein	A0A222YXV2	Escherichia_phage	1.0e-30	56.1
WP_064369813.1\|127358_127547_-	hypothetical protein	NA	NA	NA	NA
WP_054866672.1\|127543_128077_-	PadR family transcriptional regulator	K7R9C0	Vibrio_phage	1.9e-11	33.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP013487

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013487_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013487_1

157974-159261

TypeI-F

I-F

Consensus_repeat	Method
CTTCTAAGCTGCCTATGCGGCAGTGAAC	CRISPRCasFinder
CTTCTAAGCTGCCTATGCGGCAGTGAAC	CRT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	PILER-CR

21 spacers

RT,cas6f,cas7f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NZ_CP013487_1

>merge|NZ_CP013487|1|157974-159261|CRISPRCasFinder,CRT,PILER-CR
ATTCTAAGCTGCCTATGCGGCAGTGAACTCACCGGTGCCTTTGTCGCGCCACGTTTCTGACTTCTAAGCTGCCTATGCGGCAGTGAACAGATCGCAATTTTGAACAATAGCGGTAATGTGCTTCTAAGCTGCCTATGCGGCAGTGAACATATGAATGGTGATAATCACGCGCTTTGGGGTCTTCTAAGCTGCCTATGCGGCAGTGAACGACTTCTAATTGTTCATCAATGATTGTGCATTCTTCTAAGCTGCCTATGCGGCAGTGAACTAGCCCAGTTCACCCACTTGGTTTGCCAAATTCTTCTAAGCTGCCTATGCGGCAGTGAACCCATGGCCATGATGGTGCCAAGCCTATTGGAACTTCTAAGCTGCCTATGCGGCAGTGAACTCTTTCTCACGAAATCGAACATACTGCTTGGTCTTCTAAGCTGCCTATGCGGCAGTGAACAAGTTATCAAGCGCCTTTAAACCCATTTTAAACTTCTAAGCTGCCTATGCGGCAGTGAACCGGTCTTAACGGTCTTAACGAACGGTCTTAACCTTCTAAGCTGCCTATGCGGCAGTGAACTCACTAGCGTAATTTCTTAGCATCTTCATAGACTTCTAAGCTGCCTATGCGGCAGTGAACAGCTGAACTCGATCACAATGATGATTCGCTATCTTCTAAGCTGCCTATGCGGCAGTGAACTGCTTGAAGTTAACCGCACGGATTGGTTTTGTCTTCTAAGCTGCCTATGCGGCAGTGAACTTTGATTTTCTTGAGCCGTGGCCTTGTCTGATCTTCTAAGCTGCCTATGCGGCAGTGAACGCCAAATTTCTTCGAGTACCGATTCACCATAGCTTCTAAGCTGCCTATGCGGCAGTGAACGAACAATGGCAAGGCTTCGTGTGGTTTGAATTCTTCTAAGCTGCCTATGCGGCAGTGAACATGTAGTCGTTACAGCAACGCTCCACAAGAAACTTCTAAGCTGCCTATGCGGCAGTGAACTATCACCGCGCTTGAATTCAATCGTTAATGATCTTCTAAGCTGCCTATGCGGCAGTGAACACGAACCAAACATTGAAAGTATTGGCGGCTATCTTCTAAGCTGCCTATGCGGCAGTGAACGACGCATAGATTTTAGCAGATTTATCGTCTCTCTTCTAAGCTGCCTATGCGGCAGTGAACATTATGCTGTTTACGAGCATGGTTCTAAGAATCTTCTAAGCTGCCTATGCGGCAGTGAACATAAAGAGATTTCTTATTTTAACCCTCGTAAACTTCTAAGCTGCCTATGCGGCAGTGAAC

>NZ_CP013487|1|1|157974-159261|CRISPRCasFinder
ATTCTAAGCTGCCTATGCGGCAGTGAAC	TCACCGGTGCCTTTGTCGCGCCACGTTTCTGA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	AGATCGCAATTTTGAACAATAGCGGTAATGTG
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ATATGAATGGTGATAATCACGCGCTTTGGGGT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	GACTTCTAATTGTTCATCAATGATTGTGCATT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TAGCCCAGTTCACCCACTTGGTTTGCCAAATT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	CCATGGCCATGATGGTGCCAAGCCTATTGGAA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TCTTTCTCACGAAATCGAACATACTGCTTGGT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	AAGTTATCAAGCGCCTTTAAACCCATTTTAAA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	CGGTCTTAACGGTCTTAACGAACGGTCTTAAC
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TCACTAGCGTAATTTCTTAGCATCTTCATAGA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	AGCTGAACTCGATCACAATGATGATTCGCTAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TGCTTGAAGTTAACCGCACGGATTGGTTTTGT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TTTGATTTTCTTGAGCCGTGGCCTTGTCTGAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	GCCAAATTTCTTCGAGTACCGATTCACCATAG
CTTCTAAGCTGCCTATGCGGCAGTGAAC	GAACAATGGCAAGGCTTCGTGTGGTTTGAATT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ATGTAGTCGTTACAGCAACGCTCCACAAGAAA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TATCACCGCGCTTGAATTCAATCGTTAATGAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ACGAACCAAACATTGAAAGTATTGGCGGCTAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	GACGCATAGATTTTAGCAGATTTATCGTCTCT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ATTATGCTGTTTACGAGCATGGTTCTAAGAAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ATAAAGAGATTTCTTATTTTAACCCTCGTAAA
CTTCTAAGCTGCCTATGCGGCAGTGAAC

>NZ_CP013487|1|1|157974-159261|CRT
ATTCTAAGCTGCCTATGCGGCAGTGAAC	TCACCGGTGCCTTTGTCGCGCCACGTTTCTGA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	AGATCGCAATTTTGAACAATAGCGGTAATGTG
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ATATGAATGGTGATAATCACGCGCTTTGGGGT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	GACTTCTAATTGTTCATCAATGATTGTGCATT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TAGCCCAGTTCACCCACTTGGTTTGCCAAATT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	CCATGGCCATGATGGTGCCAAGCCTATTGGAA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TCTTTCTCACGAAATCGAACATACTGCTTGGT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	AAGTTATCAAGCGCCTTTAAACCCATTTTAAA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	CGGTCTTAACGGTCTTAACGAACGGTCTTAAC
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TCACTAGCGTAATTTCTTAGCATCTTCATAGA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	AGCTGAACTCGATCACAATGATGATTCGCTAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TGCTTGAAGTTAACCGCACGGATTGGTTTTGT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TTTGATTTTCTTGAGCCGTGGCCTTGTCTGAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	GCCAAATTTCTTCGAGTACCGATTCACCATAG
CTTCTAAGCTGCCTATGCGGCAGTGAAC	GAACAATGGCAAGGCTTCGTGTGGTTTGAATT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ATGTAGTCGTTACAGCAACGCTCCACAAGAAA
CTTCTAAGCTGCCTATGCGGCAGTGAAC	TATCACCGCGCTTGAATTCAATCGTTAATGAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ACGAACCAAACATTGAAAGTATTGGCGGCTAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	GACGCATAGATTTTAGCAGATTTATCGTCTCT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ATTATGCTGTTTACGAGCATGGTTCTAAGAAT
CTTCTAAGCTGCCTATGCGGCAGTGAAC	ATAAAGAGATTTCTTATTTTAACCCTCGTAAA
CTTCTAAGCTGCCTATGCGGCAGTGAAC

>NZ_CP013487|1|1|157975-159261|PILER-CR
TTCTAAGCTGCCTATGCGGCAGTGAACT	CACCGGTGCCTTTGTCGCGCCACGTTTCTGAC
TTCTAAGCTGCCTATGCGGCAGTGAACA	GATCGCAATTTTGAACAATAGCGGTAATGTGC
TTCTAAGCTGCCTATGCGGCAGTGAACA	TATGAATGGTGATAATCACGCGCTTTGGGGTC
TTCTAAGCTGCCTATGCGGCAGTGAACG	ACTTCTAATTGTTCATCAATGATTGTGCATTC
TTCTAAGCTGCCTATGCGGCAGTGAACT	AGCCCAGTTCACCCACTTGGTTTGCCAAATTC
TTCTAAGCTGCCTATGCGGCAGTGAACC	CATGGCCATGATGGTGCCAAGCCTATTGGAAC
TTCTAAGCTGCCTATGCGGCAGTGAACT	CTTTCTCACGAAATCGAACATACTGCTTGGTC
TTCTAAGCTGCCTATGCGGCAGTGAACA	AGTTATCAAGCGCCTTTAAACCCATTTTAAAC
TTCTAAGCTGCCTATGCGGCAGTGAACC	GGTCTTAACGGTCTTAACGAACGGTCTTAACC
TTCTAAGCTGCCTATGCGGCAGTGAACT	CACTAGCGTAATTTCTTAGCATCTTCATAGAC
TTCTAAGCTGCCTATGCGGCAGTGAACA	GCTGAACTCGATCACAATGATGATTCGCTATC
TTCTAAGCTGCCTATGCGGCAGTGAACT	GCTTGAAGTTAACCGCACGGATTGGTTTTGTC
TTCTAAGCTGCCTATGCGGCAGTGAACT	TTGATTTTCTTGAGCCGTGGCCTTGTCTGATC
TTCTAAGCTGCCTATGCGGCAGTGAACG	CCAAATTTCTTCGAGTACCGATTCACCATAGC
TTCTAAGCTGCCTATGCGGCAGTGAACG	AACAATGGCAAGGCTTCGTGTGGTTTGAATTC
TTCTAAGCTGCCTATGCGGCAGTGAACA	TGTAGTCGTTACAGCAACGCTCCACAAGAAAC
TTCTAAGCTGCCTATGCGGCAGTGAACT	ATCACCGCGCTTGAATTCAATCGTTAATGATC
TTCTAAGCTGCCTATGCGGCAGTGAACA	CGAACCAAACATTGAAAGTATTGGCGGCTATC
TTCTAAGCTGCCTATGCGGCAGTGAACG	ACGCATAGATTTTAGCAGATTTATCGTCTCTC
TTCTAAGCTGCCTATGCGGCAGTGAACA	TTATGCTGTTTACGAGCATGGTTCTAAGAATC
TTCTAAGCTGCCTATGCGGCAGTGAACA	TAAAGAGATTTCTTATTTTAACCCTCGTAAAC
TTCTAAGCTGCCTATGCGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013487.1\|WP_064369930.1\|161103_161997_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP013487.1\|WP_064369932.1\|163264_166651_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_CP013487.1\|WP_064369927.1\|157369_157942_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP013487.1\|WP_064369933.1\|166647_167625_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP013487.1\|WP_064369700.1\|147467_148940_+\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP013487.1\|WP_081048956.1\|169106_169211_+\|DUF3265-domain-containing-protein	unknown	unknown	gnl\|CDD\|288509
NZ_CP013487.1\|WP_064369926.1\|156145_156865_+\|carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|239398
NZ_CP013487.1\|WP_064369924.1\|153969_155151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013487.1\|WP_064369931.1\|161993_163265_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|378220
NZ_CP013487.1\|WP_064369922.1\|152418_152676_-\|bacteriocin-immunity-protein	unknown	unknown	gnl\|CDD\|319897
NZ_CP013487.1\|WP_064369921.1\|149314_149842_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|226216
NZ_CP013487.1\|WP_064369925.1\|155372_155774_+\|H-NS-histone-family-protein	unknown	unknown	gnl\|CDD\|182380
NZ_CP013487.1\|WP_064369936.1\|170318_170858_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|212669
NZ_CP013487.1\|WP_064369934.1\|168642_169104_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013487.1\|WP_064369929.1\|160060_161092_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP013487.1\|WP_064369855.1\|150025_151066_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP013487.1\|WP_081048955.1\|146483_146906_+\|DUF2913-family-protein	unknown	unknown	gnl\|CDD\|371392
NZ_CP013487.1\|WP_064369928.1\|159412_160051_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	pfam09618_cas6f_CAS-I-F	gnl\|CDD\|187870
NZ_CP013487.1\|WP_064369923.1\|152672_153977_-\|S-type-pyocin-domain-containing-protein	unknown	unknown	gnl\|CDD\|377742
NZ_CP013487.1\|WP_064369935.1\|169262_169772_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013487.1\|WP_064369930.1\|161103_161997_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	6.2263e-159
NZ_CP013487.1\|WP_064369932.1\|163264_166651_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP013487.1\|WP_064369927.1\|157369_157942_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	2.76058e-52
NZ_CP013487.1\|WP_064369933.1\|166647_167625_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	6.87224e-170
NZ_CP013487.1\|WP_064369700.1\|147467_148940_+\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	6.47809e-141
NZ_CP013487.1\|WP_081048956.1\|169106_169211_+\|DUF3265-domain-containing-protein	gnl\|CDD\|288509	pfam11665, DUF3265, Protein of unknown function (DUF3265). This family of proteins with unknown function appear to be restricted to Vibrio.	6.06598e-07
NZ_CP013487.1\|WP_064369926.1\|156145_156865_+\|carbonic-anhydrase-family-protein	gnl\|CDD\|239398	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. Most alpha CAs are monomeric enzymes. The zinc ion is complexed by three histidines. This sub-family includes bacterial carbonic anhydrase alpha, as well as plant enzymes such as tobacco nectarin III and yam dioscorin and, carbonic anhydrases from molluscs, such as nacrein, which are part of the organic matrix layer in shells. Other members of this family may be involved in maintaining pH balance, in facilitating transport of carbon dioxide or carbonic acid, or in sensing carbon dioxide levels in the environment. Dioscorin is the major storage protein of yam tubers and may play a role as an antioxidant. Tobacco Nectarin may play a role in the maintenace of pH and oxidative balance in nectar. Mollusc nacrein may participate in calcium carbonate crystal formation of the nacreous layer. This subfamily also includes three alpha carbonic anhydrases from Chlamydomonas reinhardtii (CAH 1-3). CAHs1-2 are localized in the periplasmic space. CAH1 faciliates the movement of carbon dioxide across the plasma membrane when the medium is alkaline. CAH3 is localized to the thylakoid lumen and provides CO2 to Rubisco.	1.94091e-94
NZ_CP013487.1\|WP_064369923.1\|152672_153977_-\|S-type-pyocin-domain-containing-protein	gnl\|CDD\|377742	pfam06958, Pyocin_S, S-type Pyocin. This family represents a conserved region approximately 180 residues long within bacterial S-type pyocins. Pyocins are polypeptide toxins produced by, and active against, bacteria. S-type pyocins cause cell death by DNA breakdown due to endonuclease activity.	9.52829e-29
NZ_CP013487.1\|WP_064369931.1\|161993_163265_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	2.30742e-125
NZ_CP013487.1\|WP_064369922.1\|152418_152676_-\|bacteriocin-immunity-protein	gnl\|CDD\|319897	cd16363, Col_Im_like, inhibitory immunity (Im) protein of colicin (Col) deoxyribonuclease (DNase) and pyocins. This family contains inhibitory immunity (Im) proteins that bind to colicin endonucleases (DNases) or pyocins with very high affinity and specificity; this is critical for the neutralization of endogenous DNase catalytic activity and for protection against exogenous DNase bacteriocins. The DNase colicin family (ColE2, ColE7, ColE8 and ColE9) in E. coli, and pyocin family (S1, S2, S3 and AP41) in P. aeruginosa, are potent bacteriocins where the immunity proteins (Ims) protect the colicin/pyocin producing (i.e. colicinogenic) bacteria by binding and inactivating colicin nucleases. The binding affinities between cognate and non-cognate nucleases by Im proteins can vary up to 10 orders of magnitude.	8.75083e-38
NZ_CP013487.1\|WP_064369921.1\|149314_149842_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|226216	COG3692, COG3692, Uncharacterized protein conserved in bacteria [Function unknown].	2.47449e-12
NZ_CP013487.1\|WP_064369925.1\|155372_155774_+\|H-NS-histone-family-protein	gnl\|CDD\|182380	PRK10328, PRK10328, DNA-binding protein StpA.	2.46682e-38
NZ_CP013487.1\|WP_064369929.1\|160060_161092_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP013487.1\|WP_064369855.1\|150025_151066_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.92952e-22
NZ_CP013487.1\|WP_081048955.1\|146483_146906_+\|DUF2913-family-protein	gnl\|CDD\|371392	pfam11140, DUF2913, Protein of unknown function (DUF2913). This family of proteins with unknown function appear to be restricted to Gammaproteobacteria.	4.57882e-09
NZ_CP013487.1\|WP_064369928.1\|159412_160051_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	6.71325e-60
NZ_CP013487.1\|WP_064369936.1\|170318_170858_+\|hypothetical-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	0.000117224

>NZ_CP013487.1|WP_064369927.1|157369_157942_+|recombinase-family-protein
MAKVGYARVSSTVQSLDVQLEKLNHVGCQRIYQEKRSGRTSNRPEFQSCMNYLREGDTLVITRLDRLARSVVHLAQLAKRFEKEKINLIVIDQNIDTSTSTGRLMFNMLTSIAEFENDLRTERQAERIAKAKENGVKFGRPTKLNEQICHAIHLRRTEGATIGQLAKEFQLGEATIYRALKIVSSNLPPD
>NZ_CP013487.1|WP_064369926.1|156145_156865_+|carbonic-anhydrase-family-protein
MKKSLLTLSLSFLTLSNAYASEWGYNDDQHGPAHWGTFAQDCSMTKNQSPINIEQSTQATLEVLNISYSGKVIGFTNNGHTLQAQVDGQNTLTIDGKTFELQQFHFHTPSENMIKNHQYPLEAHFVHANDDGELAVISVMFDEAQPNSALTQLIRHIPEKDNTDFFSDGFKIRELLPESAHYYRFNGSLTTPPCSEGVRWFVLKDTQSLSKEQASKLMSVMGQNNRPLQPLNARVVLSN
>NZ_CP013487.1|WP_064369925.1|155372_155774_+|H-NS-histone-family-protein
MLELAKTLLNIRSLRAFARELSFEQLEEALGKFTTVVEERREADELEQLERTEKEEKMVAIAKQIAQQGIDVEELVHALAGEPKPKAKRAPRPAKYKYIDANGKEKTWTGQGRTPTPIQEQLNAGKSLDDFLI
>NZ_CP013487.1|WP_064369924.1|153969_155151_-|hypothetical-protein
MSYKVVLLTNLMTYEFGQTEADFYYLSNSDLSSVLSSQRLSLEQLKEKLRGGHLVLLSSSRSMPLLVYEEDNVGVLAWRVSEAATSRLTPVAQRALNARALLAGKVYPRFTPSLSPSPPMPEYRPEPIVPLESEKKLPLDYEYCFDMACSIDTLEKVVRLDYMLGTTDNESRIENWRENSLASDRTRIQLLGRVEEMKRFYIHEVGRSLGLSSPLWVKMRRRGANVASEGFMPIQPAVQLGMRLGLPTEGFLYHFHGITLLQEYRLVGDGRWFFYVTMTYGNGQRLDPEPRFDGMTSTILVYWKLDGQIVDNQYLVHLDRQITRDELNALDEEWLQNHGVKLDIPILLDVTHEEVLPREEKVAPKPEPYKTHKVQLDPDTGQRETWMKIAEHE
>NZ_CP013487.1|WP_064369923.1|152672_153977_-|S-type-pyocin-domain-containing-protein
MNNAPLNTYYDYTGPLIEGSTLVPIRKSFVRDDVPIVRVRDITPYKVFAKSCTQPEGCIDAGQDEESISNFGPWAFFFAEANANPAAFAVPAIEATQAQMAITASQSVVAGTPDGQAGMTPTQLNHVAGTLKDKLVEGYRWQVEGIASLFALQQTLFNDETQYTDADMRALGQVQSRVRVHITEPEASNQYPVVRAYHMDDTRIPVRYVEVEDNQQYSVILDEASGAKIYWTPSDGGDASWQATPGHDDGFEQEDILVTPIHQEGSNATVTPMPEEQDWRDAILVFPEDSGIAPLYVVYKDSPRDKPGVVTGQGKDVTGVWLAKAGEDLGVPIPSRIAQKMNGKEFSSFDSFRKAFWIEVSRESVLLGQFNTQNQLRIKLSKSPKVRSKDKAGKRKSFELHHIEEVQYGGQVYDLDNIRVNTPQNHINIHRGTK
>NZ_CP013487.1|WP_064369922.1|152418_152676_-|bacteriocin-immunity-protein
MKRTSITDYTESEFLSLVEQIFKENVAETDDVLDELLELFETITEYPDGSDLIYYPESPEDDTPENIVRIVKGWRQSQGLPCFKE
>NZ_CP013487.1|WP_064369855.1|150025_151066_-|IS481-family-transposase
MLHTSNPIIKHKAGLLNLAEELGNVSRACKVMGVSRDTFYRYQELVETGGIDALINQSRRTPNLKNRVDSETEQAVLKYAIDFPAHGQVRTSNELRKLGVFISPSGVRSIWLRNDLENFKKRLIALEKRVAENGIILTDEQVAALERKKHDDDACGEIETAHPGYLGSQDTFYVGNLKGVGRIYQQTFVDTYSKIAFAKLYTTKTPITAADMLNDKVLPFFENHELPMLRILTDRGTEYCGRVDQHDYQLYLAINDIDHTKTKAMSPQTNGICERFHKTILNEFYQVTFRKKLYGSMEELQKDLDEWMDYYNNHRTHQGKMCCGRTPIETLEDGKSIWAEKNLAQI
>NZ_CP013487.1|WP_064369921.1|149314_149842_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MSQLMIKGNVRIGHVYDCLFGQYKKQGGGLTTVRADAALDYNFPIPNEIIKTRLVVVIGKHRGLYIVVPISATKEHAKKETKEPEYQGFHVRLEHTDIPTTPRYPYGVDRWALCNLITTVDGGRLRDLYHSDQKTNVEAQKVSDVTLLKIRKGVIISIGMRDILNVNIDTEGNNN
>NZ_CP013487.1|WP_064369700.1|147467_148940_+|group-II-intron-reverse-transcriptase/maturase
MMISNEISASSDSAQWQSIKWKAVEAQVLKLQMRIAKAIREGKYGKAKALQWILTHSRSAKILAVKRVSQNKGSKTAGIDGIIWNSDSRRMKAVNQLSRQGYKAKPLRRIYIPKKNGKLRPLGIPCMIDRAQQALHLLALEPISETLADPNSYGFRPKRATADAITQCYICLAKKHSPQWILEGDIKACFDKIGHQWLMENIQTDKRMLKQWLQCGFMDKALFYKTEEGTPQGGIISPTLMVLTMSGLEQFLKATIRKKGNKINFIGYADDFIVTGATKELLEHEVKPLITKFLEERGLTLSDEKTRVTHITNGFDFLGFNVRKYNGKFLTKPSKSNVLLFLRNMRELIKKNLATPVNKLISMMNPKLRGWANYYHHSVAQRTFSYVSHQIFLKLWQWAEKRHPKKGKRWIANKYFLNRKGQWQFHGWKKIANLDCQVNLVQIAQTPIRRHVKIRGKATPYDPAYVSYFKMRSQNKRGRNSWFDTSLMPI
>NZ_CP013487.1|WP_081048955.1|146483_146906_+|DUF2913-family-protein
MQIKRDFNYYYNLNTLVTNALLHLLCKVSSTNRYVPTDTRNEILVKYLKPKVADKSLSNIKKDIKLMLNVARKKGGNLEMKLHELNVKASKTTLAGAERLYNLLVHLYDEEGLESRLFEEGDEAEPGILYMIEDVRREAI
>NZ_CP013487.1|WP_064369928.1|159412_160051_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MNYYQEITLLPDADISFGFIWQNVFQQVHLALVDNKVADNQSAIAVSFPEYGKSGFPLGNKLRLFAKEQAGLEKLSIEQWLSRLENYVHIKGIKSVPNDVTYVSFTRKQVKSPERIERDMQKKAELWAAKSGRSLQECLVELEKTKPTSFCSLPFIYLHSQQTKQRSPDKSSRFPLFIEMNDIGIRQEGHFDCYGLNAKLNQQYGLGTVPQF
>NZ_CP013487.1|WP_064369929.1|160060_161092_-|type-I-F-CRISPR-associated-protein-Csy3
MAKNNDTASVLAFEKKLAPSDGYLYGTNWDAKDKATPLVLQEKSVRGTISNRLKAAVQKDPLKLNAEVEKANLQRVDVCALGQEQDTLKLHFTLKILGGLAQPSACNNALFRQSYSAAVNQYISKYGCSELAQRYATNIANARFLWRNRVGAEDIEVQVKALNKGTEQSWTFNAKEYKVHCFDNADEQIKSLADRIAQTLSNESEHLMLQIDCYAKVGNAQEVYPSEELVLDKGNSKIKKSKILYAVNDNAAMHSQKIGNALRSIDTWYPDFSDAEKSAGAIAIEPYGAVTNLGKAFRTPKDKQDFYTFFDKWARGEALSREEDEHYVVAVLVRGGVFGESDK
>NZ_CP013487.1|WP_064369930.1|161103_161997_-|type-I-F-CRISPR-associated-protein-Csy2
MRLLILPHIRIHNANALSSPFTIGFPAMTAWLGFTHALERKLNQASLDELMFGSVAVVSHQFDLQTHKGEGDFVHSIIGTGNPLDKDGSRSAFIEEARCHLEVSLVIEYSGNDDEIESDDFVQRLQDMVATMKIAGGDILSLQTPESQLVTEDNEQETEKLLRQLMPGYVLVERRELMADAMQEGSDALDALLSYLTVNHSCEQLEDESVIWRSQRKASGWIVPIATGFQGISPLGQAKNQRDPTVPHRFAESIVTLGEFVMVHKIKHLDEMFWRYSTDLDNDLYLCQQVNTMNEYQ
>NZ_CP013487.1|WP_064369931.1|161993_163265_-|type-I-F-CRISPR-associated-protein-Csy1
MEVSTVIDPAIKAFFAERKEAWLKKNMSAAMDEQQLREKQQECEQNFSLSNWLPDAAKRAGQISISSHPCTFSHPSARKNKNGYVSSVIAKKCAQTDGFLRSGNVSVEVDALGNAAALDVYKFLSLEMADKRSLLTHIEQGSELAQGLLTQPNTDYQTLREGFLKMIDTDQEAISSSKVKQVYFPVAEGEYHLLSLLTHSGHLFELRQRLDALRFGEEVKQARECRKNGQFHPDGYQEILGLTTIGFGGTKPQNISVLNNKNAGKAHLLASTPPELKPRNLRLPTTDFFKESFTARQAKETLEALHRLFKTDYNNINIRDGRDYRIQEYVDLVIHRMWQVRLFLADYQGELSSNLKPEQKFWLYPEYEQYRLEENEWLEGIIRQISRSLIFNYSKVANYSTALADYELLAIERVVRDNKEALR
>NZ_CP013487.1|WP_064369932.1|163264_166651_-|type-I-F-CRISPR-associated-helicase-Cas3
MMVTFVSQCEKNALKKSRRVLDAFANRIGDNTWQTLITEDGLQTVQKMLRQTASRSTAVSCHWIRSRSRSQFLWVVGNKKKFNLEGYVAVNSTEKDLLNNEYESDWKYLPVIKALTSMAALLHDWGKASLLFQEKLHPDIQTKHKGDPLRHEWISCLLFNQFVTSVTPDGEDKQWLSAIINDGIHSPAINSTSLMAKDKPLAELPTVASLISWLIVSHHRLPLPKEPKLCDNQRDKSNTSLADLLKRITQAWGYENQFDDYQKLLPKCFSFPLGLLSDSSIWNQQIQKRAKDLFHHLPLIEQAVSEGSWRVILHHARLCLMLGDHHYSSQPNDPLWNSSIELYANTDQNTKALKQKLDEHLVNVAKVANDMVKLLPHFESEPLSATELSALAAKPNTPKQFRWQDKAVRKILQWRDITEDKSNGYFVVNMASTGCGKTMANAKIMQALSEDKQSLRFILALGLRTLTLQTGDEYKQRLKLTENDLAVLIGSKAIFELHQSGQQIDKEEKEYQQAESGSESLESLLDENDELRWSGALPEDGLSTVLTNSKERQLLYAPVLACTIDHIMAATETKRGGRYILPCLRLMSSDLVIDEIDDFTDDDLIAIGRLVHLAAMLGRKVMISSATIPPDLALGLYNAYRQGWALFAASRDQISSVNCVYVDEFNTQTELIGCADSDWLQYQAFQQQFITKRVAKLKQQEAKRKADIFACDKHDRLPTEQQYYQHIQQAIIEKHQHHSTCDLVSQTHVSFGVVRVANIQPCVRLTQYLLTCDWPEDTEVRCMAYHSQQVLLLRHEQEKHLDIVLKRKEKDDEVPVAFNEPLIRQHIDNCRTKNLIFILVATPVEEVGRDHDFDWAVIEPSSFRSIIQMAGRVRRHRDGEVAEPNISLLQYNYKGYKGYKGGVERVFNHPGYETERSTQLDTHDLKLLVDEKLLLQSVNAIERIQKRPNLTPRTNLADLEHFATAKTLGVEQINNPPVSSTSRQDRFSRHRRPNPSDSFWNDHLHGHITGYWWMTALPQYFKRFRKSEPSVQLYLVKKHRTTEFCIRDELGGLNTIEQTLNIERQSLTNEQQQRLWLYRDYGALVRQYSSSADDEFKTSVKFGEISFTDRGKQDQYSYNDQLGLVKGK
>NZ_CP013487.1|WP_064369933.1|166647_167625_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MEQFSSSDLKTILHSKRANMFYLEYCRVMQKDGRVLYLTETGKENLYYNIPIANTTVLLLGNGTSITQAAVRMLSQAGVLVGFCGGGGTPLYMANEVEWFTPQSEYRPTEYLQGWLSFWFDDAKRLAAAKMFQNARIDYLQRVWCKDRELALEKFNVQDEIIQQSLDAFHQRTDAASKPSDLLLTEAQLTKSLYKYAANNTGKENFSRQHKSTDKANDFLNHGNYLAYGLAASCLWVLGIPHGFAIMHGKTRRGALVFDVADLIKDAIVLPWAFVCAKENATEQEFRQQILQSFIEHKAMDFMFDTVKQVALQNYSPTEIEEKQL
>NZ_CP013487.1|WP_064369934.1|168642_169104_+|hypothetical-protein
MNLESLNKYWSSFKTKPLYSFFGLFVIICVAVITSFLNGFGQEFGRQLAVDTKEVKAFYQVKLSLGNTWGRQISEIEPQHFNVELVKIDNDNSAQILLNTPEVGKYTWHTYDIDKEFSKAFQSKDYFYLFEILKIDSNAGYIEFKLYKTKQNA
>NZ_CP013487.1|WP_081048956.1|169106_169211_+|DUF3265-domain-containing-protein
MCLRVTRNAWHFCYALRFVFKVDCGSFGIALLTP
>NZ_CP013487.1|WP_064369935.1|169262_169772_+|hypothetical-protein
MKLTDYLAIYAAILSTLVFIWNMLQSKPKIRVDLVYDIEEDGEDLKSGVYIFVRNLSSHQVHLSNVSLMYPYRKVSVKERIIHLWKYKRLPIRIGWVSTSLSNYSIDDGCPICIEPRMSHKVLIIDEKLEKLLEGSINNSVIACTQDQLWNNTYSKVFVNPVLNSEKSV
>NZ_CP013487.1|WP_064369936.1|170318_170858_+|hypothetical-protein
MFNDCSTLFIGYDDGNAQHKISAESVKTSFPTHIQRSTERFAVLDETFSVSSNAPVQTKFTSAVTGNAYTIGEVKQPIPRNDDFSNSEAAQVLLQHGLNQFGDELLNKKYVLCTGMPLRQFFKTDGSVNENNVKQKMLSMQRSFDHLGTDPESKLRKSNIEALLVQRAIVKCGVWRIMQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP013487_1	1.7\|158362\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158362-158393	32	NZ_CP013485.1	1192132-1192163	0	1.0
NZ_CP013487_1	1.28\|158363\|32\|NZ_CP013487\|PILER-CR	158363-158394	32	NZ_CP013485.1	1192132-1192163	0	1.0
NZ_CP013487_1	1.15\|158842\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158842-158873	32	NZ_CP013485.1	1192311-1192342	1	0.969
NZ_CP013487_1	1.36\|158843\|32\|NZ_CP013487\|PILER-CR	158843-158874	32	NZ_CP013485.1	1192311-1192342	1	0.969
NZ_CP013487_1	1.5\|158242\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158242-158273	32	NZ_CP013485.1	1214349-1214380	2	0.938
NZ_CP013487_1	1.26\|158243\|32\|NZ_CP013487\|PILER-CR	158243-158274	32	NZ_CP013485.1	1214349-1214380	2	0.938

1. spacer 1.7|158362|32|NZ_CP013487|CRISPRCasFinder,CRT matches to position: 1192132-1192163, mismatch: 0, identity: 1.0

tctttctcacgaaatcgaacatactgcttggt	CRISPR spacer
tctttctcacgaaatcgaacatactgcttggt	Protospacer
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2. spacer 1.28|158363|32|NZ_CP013487|PILER-CR matches to position: 1192132-1192163, mismatch: 0, identity: 1.0

tctttctcacgaaatcgaacatactgcttggt	CRISPR spacer
tctttctcacgaaatcgaacatactgcttggt	Protospacer
********************************

3. spacer 1.15|158842|32|NZ_CP013487|CRISPRCasFinder,CRT matches to position: 1192311-1192342, mismatch: 1, identity: 0.969

gaacaatggcaaggcttcgtgtggtttgaatt	CRISPR spacer
gaacaatggcaaggcttcgtgtggtttgagtt	Protospacer
*****************************.**

4. spacer 1.36|158843|32|NZ_CP013487|PILER-CR matches to position: 1192311-1192342, mismatch: 1, identity: 0.969

gaacaatggcaaggcttcgtgtggtttgaatt	CRISPR spacer
gaacaatggcaaggcttcgtgtggtttgagtt	Protospacer
*****************************.**

5. spacer 1.5|158242|32|NZ_CP013487|CRISPRCasFinder,CRT matches to position: 1214349-1214380, mismatch: 2, identity: 0.938

tagcccagttcacccacttggtttgccaaatt	CRISPR spacer
tagcccagttcacccattttgtttgccaaatt	Protospacer
****************.** ************

6. spacer 1.26|158243|32|NZ_CP013487|PILER-CR matches to position: 1214349-1214380, mismatch: 2, identity: 0.938

tagcccagttcacccacttggtttgccaaatt	CRISPR spacer
tagcccagttcacccattttgtttgccaaatt	Protospacer
****************.** ************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013487_1	1.1\|158002\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158002-158033	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158002-158033	0	1.0
NZ_CP013487_1	1.2\|158062\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158062-158093	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158062-158093	0	1.0
NZ_CP013487_1	1.3\|158122\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158122-158153	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158122-158153	0	1.0
NZ_CP013487_1	1.4\|158182\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158182-158213	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158182-158213	0	1.0
NZ_CP013487_1	1.5\|158242\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158242-158273	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158242-158273	0	1.0
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158302-158333	0	1.0
NZ_CP013487_1	1.7\|158362\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158362-158393	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158362-158393	0	1.0
NZ_CP013487_1	1.8\|158422\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158422-158453	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158422-158453	0	1.0
NZ_CP013487_1	1.9\|158482\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158482-158513	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158482-158513	0	1.0
NZ_CP013487_1	1.10\|158542\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158542-158573	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158542-158573	0	1.0
NZ_CP013487_1	1.11\|158602\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158602-158633	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158602-158633	0	1.0
NZ_CP013487_1	1.12\|158662\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158662-158693	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158662-158693	0	1.0
NZ_CP013487_1	1.13\|158722\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158722-158753	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158722-158753	0	1.0
NZ_CP013487_1	1.14\|158782\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158782-158813	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158782-158813	0	1.0
NZ_CP013487_1	1.15\|158842\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158842-158873	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158842-158873	0	1.0
NZ_CP013487_1	1.16\|158902\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158902-158933	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158902-158933	0	1.0
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158962-158993	0	1.0
NZ_CP013487_1	1.18\|159022\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	159022-159053	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	159022-159053	0	1.0
NZ_CP013487_1	1.19\|159082\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	159082-159113	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	159082-159113	0	1.0
NZ_CP013487_1	1.20\|159142\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	159142-159173	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	159142-159173	0	1.0
NZ_CP013487_1	1.21\|159202\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	159202-159233	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	159202-159233	0	1.0
NZ_CP013487_1	1.22\|158003\|32\|NZ_CP013487\|PILER-CR	158003-158034	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158002-158033	0	1.0
NZ_CP013487_1	1.23\|158063\|32\|NZ_CP013487\|PILER-CR	158063-158094	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158062-158093	0	1.0
NZ_CP013487_1	1.24\|158123\|32\|NZ_CP013487\|PILER-CR	158123-158154	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158122-158153	0	1.0
NZ_CP013487_1	1.25\|158183\|32\|NZ_CP013487\|PILER-CR	158183-158214	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158182-158213	0	1.0
NZ_CP013487_1	1.26\|158243\|32\|NZ_CP013487\|PILER-CR	158243-158274	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158242-158273	0	1.0
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158302-158333	0	1.0
NZ_CP013487_1	1.28\|158363\|32\|NZ_CP013487\|PILER-CR	158363-158394	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158362-158393	0	1.0
NZ_CP013487_1	1.29\|158423\|32\|NZ_CP013487\|PILER-CR	158423-158454	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158422-158453	0	1.0
NZ_CP013487_1	1.30\|158483\|32\|NZ_CP013487\|PILER-CR	158483-158514	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158482-158513	0	1.0
NZ_CP013487_1	1.31\|158543\|32\|NZ_CP013487\|PILER-CR	158543-158574	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158542-158573	0	1.0
NZ_CP013487_1	1.32\|158603\|32\|NZ_CP013487\|PILER-CR	158603-158634	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158602-158633	0	1.0
NZ_CP013487_1	1.33\|158663\|32\|NZ_CP013487\|PILER-CR	158663-158694	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158662-158693	0	1.0
NZ_CP013487_1	1.34\|158723\|32\|NZ_CP013487\|PILER-CR	158723-158754	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158722-158753	0	1.0
NZ_CP013487_1	1.35\|158783\|32\|NZ_CP013487\|PILER-CR	158783-158814	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158782-158813	0	1.0
NZ_CP013487_1	1.36\|158843\|32\|NZ_CP013487\|PILER-CR	158843-158874	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158842-158873	0	1.0
NZ_CP013487_1	1.37\|158903\|32\|NZ_CP013487\|PILER-CR	158903-158934	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158902-158933	0	1.0
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	158962-158993	0	1.0
NZ_CP013487_1	1.39\|159023\|32\|NZ_CP013487\|PILER-CR	159023-159054	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	159022-159053	0	1.0
NZ_CP013487_1	1.40\|159083\|32\|NZ_CP013487\|PILER-CR	159083-159114	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	159082-159113	0	1.0
NZ_CP013487_1	1.41\|159143\|32\|NZ_CP013487\|PILER-CR	159143-159174	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	159142-159173	0	1.0
NZ_CP013487_1	1.42\|159203\|32\|NZ_CP013487\|PILER-CR	159203-159234	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	159202-159233	0	1.0
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	MH622937	Myoviridae sp. isolate ctcg_2, complete genome	2976-3007	6	0.812
NZ_CP013487_1	1.19\|159082\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	159082-159113	32	DQ079882	Coliphage ID34, complete genome	5321-5352	6	0.812
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	MH622937	Myoviridae sp. isolate ctcg_2, complete genome	2976-3007	6	0.812
NZ_CP013487_1	1.40\|159083\|32\|NZ_CP013487\|PILER-CR	159083-159114	32	DQ079882	Coliphage ID34, complete genome	5321-5352	6	0.812
NZ_CP013487_1	1.4\|158182\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158182-158213	32	NC_041878	Pectobacterium phage CBB, complete genome	112051-112082	7	0.781
NZ_CP013487_1	1.19\|159082\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	159082-159113	32	GU323318	Enterobacteria phage CC31, complete genome	152185-152216	7	0.781
NZ_CP013487_1	1.25\|158183\|32\|NZ_CP013487\|PILER-CR	158183-158214	32	NC_041878	Pectobacterium phage CBB, complete genome	112051-112082	7	0.781
NZ_CP013487_1	1.40\|159083\|32\|NZ_CP013487\|PILER-CR	159083-159114	32	GU323318	Enterobacteria phage CC31, complete genome	152185-152216	7	0.781
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	NZ_CP047266	Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence	90955-90986	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	MT080590	UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome	10351-10382	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	KY779848	Staphylococcus phage qdsa001, complete genome	72411-72442	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	KX532239	Staphylococcus phage StAP1, complete genome	52430-52461	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	LC492751	Staphylococcus phage KSAP7 genomic DNA, compelete genome	39081-39112	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	JX194239	Staphylococcus phage SA11, complete genome	83820-83851	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	LC492752	Staphylococcus phage KSAP11 genomic DNA, compelete genome	38901-38932	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	MT080584	UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome	125519-125550	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	MT080587	UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome	73986-74017	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	AP019522	Staphylococcal phage MR003 DNA, complete genome	74824-74855	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	NC_022090	Staphylococcus phage vB_SauM_Remus, complete genome	38784-38815	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	LC576631	Staphylococcus phage vB_SauH_DELF3 DNA, complete sequence	73149-73180	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	KP881332	Staphylococcus phage Stau2, complete genome	44678-44709	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	MT080588	UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome	50209-50240	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	MT080595	UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome	31461-31492	8	0.75
NZ_CP013487_1	1.17\|158962\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158962-158993	32	NC_020877	Staphylococcus phage vB_SauM_Romulus, complete genome	38784-38815	8	0.75
NZ_CP013487_1	1.21\|159202\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	159202-159233	32	NZ_CP021442	Bacillus thuringiensis strain C15 plasmid pBMB8874, complete sequence	5859-5890	8	0.75
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	NZ_CP047266	Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence	90955-90986	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	MT080590	UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome	10351-10382	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	KY779848	Staphylococcus phage qdsa001, complete genome	72411-72442	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	KX532239	Staphylococcus phage StAP1, complete genome	52430-52461	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	LC492751	Staphylococcus phage KSAP7 genomic DNA, compelete genome	39081-39112	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	JX194239	Staphylococcus phage SA11, complete genome	83820-83851	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	LC492752	Staphylococcus phage KSAP11 genomic DNA, compelete genome	38901-38932	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	MT080584	UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome	125519-125550	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	MT080587	UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome	73986-74017	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	AP019522	Staphylococcal phage MR003 DNA, complete genome	74824-74855	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	NC_022090	Staphylococcus phage vB_SauM_Remus, complete genome	38784-38815	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	LC576631	Staphylococcus phage vB_SauH_DELF3 DNA, complete sequence	73149-73180	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	KP881332	Staphylococcus phage Stau2, complete genome	44678-44709	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	MT080588	UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome	50209-50240	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	MT080595	UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome	31461-31492	8	0.75
NZ_CP013487_1	1.38\|158963\|32\|NZ_CP013487\|PILER-CR	158963-158994	32	NC_020877	Staphylococcus phage vB_SauM_Romulus, complete genome	38784-38815	8	0.75
NZ_CP013487_1	1.42\|159203\|32\|NZ_CP013487\|PILER-CR	159203-159234	32	NZ_CP021442	Bacillus thuringiensis strain C15 plasmid pBMB8874, complete sequence	5859-5890	8	0.75
NZ_CP013487_1	1.2\|158062\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158062-158093	32	NZ_CP050185	Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence	9907-9938	9	0.719
NZ_CP013487_1	1.4\|158182\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158182-158213	32	MN694673	Marine virus AFVG_250M602, complete genome	18179-18210	9	0.719
NZ_CP013487_1	1.4\|158182\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158182-158213	32	KY921761	Bacillus phage BeachBum, complete genome	11994-12025	9	0.719
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	937652-937683	9	0.719
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	550492-550523	9	0.719
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	730085-730116	9	0.719
NZ_CP013487_1	1.7\|158362\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158362-158393	32	NZ_CP040642	Agrobacterium sp. T29 plasmid unnamed2, complete sequence	209889-209920	9	0.719
NZ_CP013487_1	1.23\|158063\|32\|NZ_CP013487\|PILER-CR	158063-158094	32	NZ_CP050185	Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence	9907-9938	9	0.719
NZ_CP013487_1	1.25\|158183\|32\|NZ_CP013487\|PILER-CR	158183-158214	32	MN694673	Marine virus AFVG_250M602, complete genome	18179-18210	9	0.719
NZ_CP013487_1	1.25\|158183\|32\|NZ_CP013487\|PILER-CR	158183-158214	32	KY921761	Bacillus phage BeachBum, complete genome	11994-12025	9	0.719
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	937652-937683	9	0.719
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	550492-550523	9	0.719
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	730085-730116	9	0.719
NZ_CP013487_1	1.28\|158363\|32\|NZ_CP013487\|PILER-CR	158363-158394	32	NZ_CP040642	Agrobacterium sp. T29 plasmid unnamed2, complete sequence	209889-209920	9	0.719
NZ_CP013487_1	1.2\|158062\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158062-158093	32	HQ634148	Synechococcus phage S-CBS4, * SEQUENCING IN PROGRESS *, 2 unordered pieces	19448-19479	10	0.688
NZ_CP013487_1	1.5\|158242\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158242-158273	32	NC_008607	Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence	14537-14568	10	0.688
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	LR811967	Salmonella phage Se_EM1 genome assembly, chromosome: 1	156036-156067	10	0.688
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	NC_016073	Salmonella phage SFP10, complete genome	123588-123619	10	0.688
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	MT074476	Salmonella phage kage, complete genome	12160-12191	10	0.688
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	MT074474	Salmonella phage aagejoakim, complete genome	12199-12230	10	0.688
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	KY000003	Salmonella phage STP07, complete genome	147414-147445	10	0.688
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	LR811969	Salmonella phage Se_EM3 genome assembly, chromosome: 1	152606-152637	10	0.688
NZ_CP013487_1	1.6\|158302\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158302-158333	32	NC_031045	Salmonella phage GG32, complete genome	5262-5293	10	0.688
NZ_CP013487_1	1.23\|158063\|32\|NZ_CP013487\|PILER-CR	158063-158094	32	HQ634148	Synechococcus phage S-CBS4, * SEQUENCING IN PROGRESS *, 2 unordered pieces	19448-19479	10	0.688
NZ_CP013487_1	1.26\|158243\|32\|NZ_CP013487\|PILER-CR	158243-158274	32	NC_008607	Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence	14537-14568	10	0.688
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	LR811967	Salmonella phage Se_EM1 genome assembly, chromosome: 1	156036-156067	10	0.688
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	NC_016073	Salmonella phage SFP10, complete genome	123588-123619	10	0.688
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	MT074476	Salmonella phage kage, complete genome	12160-12191	10	0.688
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	MT074474	Salmonella phage aagejoakim, complete genome	12199-12230	10	0.688
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	KY000003	Salmonella phage STP07, complete genome	147414-147445	10	0.688
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	LR811969	Salmonella phage Se_EM3 genome assembly, chromosome: 1	152606-152637	10	0.688
NZ_CP013487_1	1.27\|158303\|32\|NZ_CP013487\|PILER-CR	158303-158334	32	NC_031045	Salmonella phage GG32, complete genome	5262-5293	10	0.688
NZ_CP013487_1	1.1\|158002\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158002-158033	32	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	821569-821600	11	0.656
NZ_CP013487_1	1.1\|158002\|32\|NZ_CP013487\|CRISPRCasFinder,CRT	158002-158033	32	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	263939-263970	11	0.656
NZ_CP013487_1	1.22\|158003\|32\|NZ_CP013487\|PILER-CR	158003-158034	32	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	821569-821600	11	0.656
NZ_CP013487_1	1.22\|158003\|32\|NZ_CP013487\|PILER-CR	158003-158034	32	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	263939-263970	11	0.656

1. spacer 1.1|158002|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tcaccggtgcctttgtcgcgccacgtttctga	CRISPR spacer
tcaccggtgcctttgtcgcgccacgtttctga	Protospacer
********************************

2. spacer 1.2|158062|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

agatcgcaattttgaacaatagcggtaatgtg	CRISPR spacer
agatcgcaattttgaacaatagcggtaatgtg	Protospacer
********************************

3. spacer 1.3|158122|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

atatgaatggtgataatcacgcgctttggggt	CRISPR spacer
atatgaatggtgataatcacgcgctttggggt	Protospacer
********************************

4. spacer 1.4|158182|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

gacttctaattgttcatcaatgattgtgcatt	CRISPR spacer
gacttctaattgttcatcaatgattgtgcatt	Protospacer
********************************

5. spacer 1.5|158242|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tagcccagttcacccacttggtttgccaaatt	CRISPR spacer
tagcccagttcacccacttggtttgccaaatt	Protospacer
********************************

6. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ccatggccatgatggtgccaagcctattggaa	Protospacer
********************************

7. spacer 1.7|158362|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tctttctcacgaaatcgaacatactgcttggt	CRISPR spacer
tctttctcacgaaatcgaacatactgcttggt	Protospacer
********************************

8. spacer 1.8|158422|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

aagttatcaagcgcctttaaacccattttaaa	CRISPR spacer
aagttatcaagcgcctttaaacccattttaaa	Protospacer
********************************

9. spacer 1.9|158482|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

cggtcttaacggtcttaacgaacggtcttaac	CRISPR spacer
cggtcttaacggtcttaacgaacggtcttaac	Protospacer
********************************

10. spacer 1.10|158542|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tcactagcgtaatttcttagcatcttcataga	CRISPR spacer
tcactagcgtaatttcttagcatcttcataga	Protospacer
********************************

11. spacer 1.11|158602|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

agctgaactcgatcacaatgatgattcgctat	CRISPR spacer
agctgaactcgatcacaatgatgattcgctat	Protospacer
********************************

12. spacer 1.12|158662|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tgcttgaagttaaccgcacggattggttttgt	CRISPR spacer
tgcttgaagttaaccgcacggattggttttgt	Protospacer
********************************

13. spacer 1.13|158722|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tttgattttcttgagccgtggccttgtctgat	CRISPR spacer
tttgattttcttgagccgtggccttgtctgat	Protospacer
********************************

14. spacer 1.14|158782|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

gccaaatttcttcgagtaccgattcaccatag	CRISPR spacer
gccaaatttcttcgagtaccgattcaccatag	Protospacer
********************************

15. spacer 1.15|158842|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

gaacaatggcaaggcttcgtgtggtttgaatt	CRISPR spacer
gaacaatggcaaggcttcgtgtggtttgaatt	Protospacer
********************************

16. spacer 1.16|158902|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

atgtagtcgttacagcaacgctccacaagaaa	CRISPR spacer
atgtagtcgttacagcaacgctccacaagaaa	Protospacer
********************************

17. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
tatcaccgcgcttgaattcaatcgttaatgat	Protospacer
********************************

18. spacer 1.18|159022|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

acgaaccaaacattgaaagtattggcggctat	CRISPR spacer
acgaaccaaacattgaaagtattggcggctat	Protospacer
********************************

19. spacer 1.19|159082|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

gacgcatagattttagcagatttatcgtctct	CRISPR spacer
gacgcatagattttagcagatttatcgtctct	Protospacer
********************************

20. spacer 1.20|159142|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

attatgctgtttacgagcatggttctaagaat	CRISPR spacer
attatgctgtttacgagcatggttctaagaat	Protospacer
********************************

21. spacer 1.21|159202|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

ataaagagatttcttattttaaccctcgtaaa	CRISPR spacer
ataaagagatttcttattttaaccctcgtaaa	Protospacer
********************************

22. spacer 1.22|158003|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tcaccggtgcctttgtcgcgccacgtttctga	CRISPR spacer
tcaccggtgcctttgtcgcgccacgtttctga	Protospacer
********************************

23. spacer 1.23|158063|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

agatcgcaattttgaacaatagcggtaatgtg	CRISPR spacer
agatcgcaattttgaacaatagcggtaatgtg	Protospacer
********************************

24. spacer 1.24|158123|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

atatgaatggtgataatcacgcgctttggggt	CRISPR spacer
atatgaatggtgataatcacgcgctttggggt	Protospacer
********************************

25. spacer 1.25|158183|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

gacttctaattgttcatcaatgattgtgcatt	CRISPR spacer
gacttctaattgttcatcaatgattgtgcatt	Protospacer
********************************

26. spacer 1.26|158243|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tagcccagttcacccacttggtttgccaaatt	CRISPR spacer
tagcccagttcacccacttggtttgccaaatt	Protospacer
********************************

27. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ccatggccatgatggtgccaagcctattggaa	Protospacer
********************************

28. spacer 1.28|158363|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tctttctcacgaaatcgaacatactgcttggt	CRISPR spacer
tctttctcacgaaatcgaacatactgcttggt	Protospacer
********************************

29. spacer 1.29|158423|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

aagttatcaagcgcctttaaacccattttaaa	CRISPR spacer
aagttatcaagcgcctttaaacccattttaaa	Protospacer
********************************

30. spacer 1.30|158483|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

cggtcttaacggtcttaacgaacggtcttaac	CRISPR spacer
cggtcttaacggtcttaacgaacggtcttaac	Protospacer
********************************

31. spacer 1.31|158543|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tcactagcgtaatttcttagcatcttcataga	CRISPR spacer
tcactagcgtaatttcttagcatcttcataga	Protospacer
********************************

32. spacer 1.32|158603|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

agctgaactcgatcacaatgatgattcgctat	CRISPR spacer
agctgaactcgatcacaatgatgattcgctat	Protospacer
********************************

33. spacer 1.33|158663|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tgcttgaagttaaccgcacggattggttttgt	CRISPR spacer
tgcttgaagttaaccgcacggattggttttgt	Protospacer
********************************

34. spacer 1.34|158723|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tttgattttcttgagccgtggccttgtctgat	CRISPR spacer
tttgattttcttgagccgtggccttgtctgat	Protospacer
********************************

35. spacer 1.35|158783|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

gccaaatttcttcgagtaccgattcaccatag	CRISPR spacer
gccaaatttcttcgagtaccgattcaccatag	Protospacer
********************************

36. spacer 1.36|158843|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

gaacaatggcaaggcttcgtgtggtttgaatt	CRISPR spacer
gaacaatggcaaggcttcgtgtggtttgaatt	Protospacer
********************************

37. spacer 1.37|158903|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

atgtagtcgttacagcaacgctccacaagaaa	CRISPR spacer
atgtagtcgttacagcaacgctccacaagaaa	Protospacer
********************************

38. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
tatcaccgcgcttgaattcaatcgttaatgat	Protospacer
********************************

39. spacer 1.39|159023|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

acgaaccaaacattgaaagtattggcggctat	CRISPR spacer
acgaaccaaacattgaaagtattggcggctat	Protospacer
********************************

40. spacer 1.40|159083|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

gacgcatagattttagcagatttatcgtctct	CRISPR spacer
gacgcatagattttagcagatttatcgtctct	Protospacer
********************************

41. spacer 1.41|159143|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

attatgctgtttacgagcatggttctaagaat	CRISPR spacer
attatgctgtttacgagcatggttctaagaat	Protospacer
********************************

42. spacer 1.42|159203|32|NZ_CP013487|PILER-CR matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 0, identity: 1.0

ataaagagatttcttattttaaccctcgtaaa	CRISPR spacer
ataaagagatttcttattttaaccctcgtaaa	Protospacer
********************************

43. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to MH622937 (Myoviridae sp. isolate ctcg_2, complete genome) position: , mismatch: 6, identity: 0.812

tatcaccgc-gcttgaattcaatcgttaatgat	CRISPR spacer
-aaaagcgcagcatgaattcaatcgtgaatgat	Protospacer
 *  * *** ** ************* ******

44. spacer 1.19|159082|32|NZ_CP013487|CRISPRCasFinder,CRT matches to DQ079882 (Coliphage ID34, complete genome) position: , mismatch: 6, identity: 0.812

gacgcatagattttagcagatttatcgtctct	CRISPR spacer
cgcgcataaatttgagcagatttatcgtcaca	Protospacer
 .******.**** *************** *

45. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to MH622937 (Myoviridae sp. isolate ctcg_2, complete genome) position: , mismatch: 6, identity: 0.812

tatcaccgc-gcttgaattcaatcgttaatgat	CRISPR spacer
-aaaagcgcagcatgaattcaatcgtgaatgat	Protospacer
 *  * *** ** ************* ******

46. spacer 1.40|159083|32|NZ_CP013487|PILER-CR matches to DQ079882 (Coliphage ID34, complete genome) position: , mismatch: 6, identity: 0.812

gacgcatagattttagcagatttatcgtctct	CRISPR spacer
cgcgcataaatttgagcagatttatcgtcaca	Protospacer
 .******.**** *************** *

47. spacer 1.4|158182|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NC_041878 (Pectobacterium phage CBB, complete genome) position: , mismatch: 7, identity: 0.781

gacttctaattgttcatcaatgattgtgcatt	CRISPR spacer
gacttctaattgttcatcagttatttcaactt	Protospacer
*******************.* *** ..  **

48. spacer 1.19|159082|32|NZ_CP013487|CRISPRCasFinder,CRT matches to GU323318 (Enterobacteria phage CC31, complete genome) position: , mismatch: 7, identity: 0.781

gacgcatagattttagcagatttatcgtctct	CRISPR spacer
gccgagtagatattaccagatttatcgtcttc	Protospacer
* ** .***** *** **************..

49. spacer 1.25|158183|32|NZ_CP013487|PILER-CR matches to NC_041878 (Pectobacterium phage CBB, complete genome) position: , mismatch: 7, identity: 0.781

gacttctaattgttcatcaatgattgtgcatt	CRISPR spacer
gacttctaattgttcatcagttatttcaactt	Protospacer
*******************.* *** ..  **

50. spacer 1.40|159083|32|NZ_CP013487|PILER-CR matches to GU323318 (Enterobacteria phage CC31, complete genome) position: , mismatch: 7, identity: 0.781

gacgcatagattttagcagatttatcgtctct	CRISPR spacer
gccgagtagatattaccagatttatcgtcttc	Protospacer
* ** .***** *** **************..

51. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP047266 (Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence) position: , mismatch: 8, identity: 0.75

ccatggccatgatggtgccaagcctattggaa--	CRISPR spacer
ccatgtccatgatggtgcccagc--agcagcaac	Protospacer
***** ************* ***  * ..* *

52. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to MT080590 (UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

53. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to KY779848 (Staphylococcus phage qdsa001, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

54. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to KX532239 (Staphylococcus phage StAP1, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

55. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to LC492751 (Staphylococcus phage KSAP7 genomic DNA, compelete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

56. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to JX194239 (Staphylococcus phage SA11, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

57. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to LC492752 (Staphylococcus phage KSAP11 genomic DNA, compelete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

58. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to MT080584 (UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

59. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to MT080587 (UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

60. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to AP019522 (Staphylococcal phage MR003 DNA, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

61. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NC_022090 (Staphylococcus phage vB_SauM_Remus, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

62. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to LC576631 (Staphylococcus phage vB_SauH_DELF3 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

63. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to KP881332 (Staphylococcus phage Stau2, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

64. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to MT080588 (UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

65. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to MT080595 (UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

66. spacer 1.17|158962|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NC_020877 (Staphylococcus phage vB_SauM_Romulus, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

67. spacer 1.21|159202|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP021442 (Bacillus thuringiensis strain C15 plasmid pBMB8874, complete sequence) position: , mismatch: 8, identity: 0.75

ataaagagatttcttattttaaccctcgtaaa	CRISPR spacer
atgatttaatttcttattttaacagtcgtaat	Protospacer
**.*   .***************  ******

68. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to NZ_CP047266 (Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence) position: , mismatch: 8, identity: 0.75

ccatggccatgatggtgccaagcctattggaa--	CRISPR spacer
ccatgtccatgatggtgcccagc--agcagcaac	Protospacer
***** ************* ***  * ..* *

69. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to MT080590 (UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

70. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to KY779848 (Staphylococcus phage qdsa001, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

71. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to KX532239 (Staphylococcus phage StAP1, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

72. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to LC492751 (Staphylococcus phage KSAP7 genomic DNA, compelete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

73. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to JX194239 (Staphylococcus phage SA11, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

74. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to LC492752 (Staphylococcus phage KSAP11 genomic DNA, compelete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

75. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to MT080584 (UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

76. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to MT080587 (UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

77. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to AP019522 (Staphylococcal phage MR003 DNA, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

78. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to NC_022090 (Staphylococcus phage vB_SauM_Remus, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

79. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to LC576631 (Staphylococcus phage vB_SauH_DELF3 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

80. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to KP881332 (Staphylococcus phage Stau2, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

81. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to MT080588 (UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

82. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to MT080595 (UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

83. spacer 1.38|158963|32|NZ_CP013487|PILER-CR matches to NC_020877 (Staphylococcus phage vB_SauM_Romulus, complete genome) position: , mismatch: 8, identity: 0.75

----tatcaccgcgcttgaattcaatcgttaatgat	CRISPR spacer
ttcataata----gcttgaattaaatcgttaataat	Protospacer
    ** .*    ********* **********.**

84. spacer 1.42|159203|32|NZ_CP013487|PILER-CR matches to NZ_CP021442 (Bacillus thuringiensis strain C15 plasmid pBMB8874, complete sequence) position: , mismatch: 8, identity: 0.75

ataaagagatttcttattttaaccctcgtaaa	CRISPR spacer
atgatttaatttcttattttaacagtcgtaat	Protospacer
**.*   .***************  ******

85. spacer 1.2|158062|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP050185 (Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence) position: , mismatch: 9, identity: 0.719

agatcgcaattttgaacaatagcggtaatgtg	CRISPR spacer
tgatcgctattttgtacaatagcgtttgttaa	Protospacer
 ****** ****** ********* * .*  .

86. spacer 1.4|158182|32|NZ_CP013487|CRISPRCasFinder,CRT matches to MN694673 (Marine virus AFVG_250M602, complete genome) position: , mismatch: 9, identity: 0.719

gacttctaattgttcatcaatgattgtgcatt	CRISPR spacer
attttctaattgttcatcaagtattgtttgtg	Protospacer
. .*****************  ***** ..*

87. spacer 1.4|158182|32|NZ_CP013487|CRISPRCasFinder,CRT matches to KY921761 (Bacillus phage BeachBum, complete genome) position: , mismatch: 9, identity: 0.719

gacttctaattgttcatcaatgattgtgcatt	CRISPR spacer
accttctaattgttcattaatgctttccactt	Protospacer
. ***************.**** ** .   **

88. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 9, identity: 0.719

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
gagtatccatgagggtgacaagcctattggcg	Protospacer
  .*. ****** **** ************ .

89. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
gagtatccatgagggtgacaagcctattggcg	Protospacer
  .*. ****** **** ************ .

90. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
gagtatccatgagggtgacaagcctattggcg	Protospacer
  .*. ****** **** ************ .

91. spacer 1.7|158362|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP040642 (Agrobacterium sp. T29 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tctttctcacgaaatcgaacatactgcttggt	CRISPR spacer
gccgaataccgaaatccaacatactgctcggt	Protospacer
 *.   *  ******* ***********.***

92. spacer 1.23|158063|32|NZ_CP013487|PILER-CR matches to NZ_CP050185 (Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence) position: , mismatch: 9, identity: 0.719

agatcgcaattttgaacaatagcggtaatgtg	CRISPR spacer
tgatcgctattttgtacaatagcgtttgttaa	Protospacer
 ****** ****** ********* * .*  .

93. spacer 1.25|158183|32|NZ_CP013487|PILER-CR matches to MN694673 (Marine virus AFVG_250M602, complete genome) position: , mismatch: 9, identity: 0.719

gacttctaattgttcatcaatgattgtgcatt	CRISPR spacer
attttctaattgttcatcaagtattgtttgtg	Protospacer
. .*****************  ***** ..*

94. spacer 1.25|158183|32|NZ_CP013487|PILER-CR matches to KY921761 (Bacillus phage BeachBum, complete genome) position: , mismatch: 9, identity: 0.719

gacttctaattgttcatcaatgattgtgcatt	CRISPR spacer
accttctaattgttcattaatgctttccactt	Protospacer
. ***************.**** ** .   **

95. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 9, identity: 0.719

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
gagtatccatgagggtgacaagcctattggcg	Protospacer
  .*. ****** **** ************ .

96. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
gagtatccatgagggtgacaagcctattggcg	Protospacer
  .*. ****** **** ************ .

97. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
gagtatccatgagggtgacaagcctattggcg	Protospacer
  .*. ****** **** ************ .

98. spacer 1.28|158363|32|NZ_CP013487|PILER-CR matches to NZ_CP040642 (Agrobacterium sp. T29 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tctttctcacgaaatcgaacatactgcttggt	CRISPR spacer
gccgaataccgaaatccaacatactgctcggt	Protospacer
 *.   *  ******* ***********.***

99. spacer 1.2|158062|32|NZ_CP013487|CRISPRCasFinder,CRT matches to HQ634148 (Synechococcus phage S-CBS4, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces) position: , mismatch: 10, identity: 0.688

agatcgcaattttgaacaatagcggtaatgtg	CRISPR spacer
ccatcgcaattttcaacaacagcggaagcaat	Protospacer
  *********** *****.***** *...

100. spacer 1.5|158242|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NC_008607 (Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence) position: , mismatch: 10, identity: 0.688

tagcccagttcacccacttggtttgccaaatt	CRISPR spacer
cctgccaattcacccagttggtttgcctgttc	Protospacer
.   ***.******** ********** . *.

101. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to LR811967 (Salmonella phage Se_EM1 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

102. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NC_016073 (Salmonella phage SFP10, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

103. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to MT074476 (Salmonella phage kage, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

104. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to MT074474 (Salmonella phage aagejoakim, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

105. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to KY000003 (Salmonella phage STP07, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

106. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to LR811969 (Salmonella phage Se_EM3 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

107. spacer 1.6|158302|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NC_031045 (Salmonella phage GG32, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

108. spacer 1.23|158063|32|NZ_CP013487|PILER-CR matches to HQ634148 (Synechococcus phage S-CBS4, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces) position: , mismatch: 10, identity: 0.688

agatcgcaattttgaacaatagcggtaatgtg	CRISPR spacer
ccatcgcaattttcaacaacagcggaagcaat	Protospacer
  *********** *****.***** *...

109. spacer 1.26|158243|32|NZ_CP013487|PILER-CR matches to NC_008607 (Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence) position: , mismatch: 10, identity: 0.688

tagcccagttcacccacttggtttgccaaatt	CRISPR spacer
cctgccaattcacccagttggtttgcctgttc	Protospacer
.   ***.******** ********** . *.

110. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to LR811967 (Salmonella phage Se_EM1 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

111. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to NC_016073 (Salmonella phage SFP10, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

112. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to MT074476 (Salmonella phage kage, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

113. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to MT074474 (Salmonella phage aagejoakim, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

114. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to KY000003 (Salmonella phage STP07, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

115. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to LR811969 (Salmonella phage Se_EM3 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

116. spacer 1.27|158303|32|NZ_CP013487|PILER-CR matches to NC_031045 (Salmonella phage GG32, complete genome) position: , mismatch: 10, identity: 0.688

ccatggccatgatggtgccaagcctattggaa	CRISPR spacer
ggggcgaaatgatggtgccaagtatattggag	Protospacer
  .  *  **************. *******.

117. spacer 1.1|158002|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 11, identity: 0.656

tcaccggtgcctttgtcgcgccacgtttctga	CRISPR spacer
atcccggtgcctttgtcgcgcaccgtgagccg	Protospacer
 . ******************  ***   . .

118. spacer 1.1|158002|32|NZ_CP013487|CRISPRCasFinder,CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 11, identity: 0.656

tcaccggtgcctttgtcgcgccacgtttctga	CRISPR spacer
atcccggtgcctttgtcgcgcaccgtgagccg	Protospacer
 . ******************  ***   . .

119. spacer 1.22|158003|32|NZ_CP013487|PILER-CR matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 11, identity: 0.656

tcaccggtgcctttgtcgcgccacgtttctga	CRISPR spacer
atcccggtgcctttgtcgcgcaccgtgagccg	Protospacer
 . ******************  ***   . .

120. spacer 1.22|158003|32|NZ_CP013487|PILER-CR matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 11, identity: 0.656

tcaccggtgcctttgtcgcgccacgtttctga	CRISPR spacer
atcccggtgcctttgtcgcgcaccgtgagccg	Protospacer
 . ******************  ***   . .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP013488

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

25314 : 64905

Sodalis_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064370063.1\|25314_26259_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	8.2e-71	52.3
WP_081048979.1\|26603_27848_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_045500498.1\|27866_28172_-	hypothetical protein	NA	NA	NA	NA
WP_064370064.1\|28495_28786_+	ANR family transcriptional regulator	NA	NA	NA	NA
WP_172797337.1\|28700_29015_-	hypothetical protein	NA	NA	NA	NA
WP_064368933.1\|29164_30403_+\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	6.1e-90	46.5
WP_081048980.1\|30805_35980_-	Ig-like domain-containing protein	NA	NA	NA	NA
WP_064370069.1\|35983_37060_-	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_064368933.1\|37418_38657_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	6.1e-90	46.5
WP_172797338.1\|38888_39287_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_081048982.1\|39319_40939_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_064370077.1\|41594_42179_-	transglutaminase-like cysteine peptidase	NA	NA	NA	NA
WP_064370001.1\|42257_42707_-	hypothetical protein	NA	NA	NA	NA
WP_064370080.1\|42831_43788_-	hypothetical protein	NA	NA	NA	NA
WP_064370003.1\|43797_44256_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_064370004.1\|44252_44702_-	hypothetical protein	NA	NA	NA	NA
WP_064370005.1\|44709_45333_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_064370006.1\|45325_45568_-	hypothetical protein	NA	NA	NA	NA
WP_064370007.1\|45564_45900_-	hypothetical protein	NA	NA	NA	NA
WP_064370082.1\|45900_48081_-	hypothetical protein	NA	NA	NA	NA
WP_064370010.1\|48689_50018_-	TonB-dependent receptor	NA	NA	NA	NA
WP_155604309.1\|50605_53707_-	Ig-like domain-containing protein	NA	NA	NA	NA
WP_081048967.1\|53762_54800_-	hypothetical protein	NA	NA	NA	NA
WP_081048974.1\|54765_55488_-	hypothetical protein	NA	NA	NA	NA
WP_081048947.1\|55504_58306_-	CS1-pili formation C-terminal domain-containing protein	NA	NA	NA	NA
WP_064369818.1\|58329_58839_-	hypothetical protein	NA	NA	NA	NA
WP_064369819.1\|58930_59473_-	hypothetical protein	NA	NA	NA	NA
WP_064370087.1\|62264_63113_+	hypothetical protein	NA	NA	NA	NA
WP_064370088.1\|63960_64905_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	4.1e-70	52.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage