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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012184 Pseudonocardia sp. EC080619-01 chromosome, complete genome 7 crisprs csa3,WYL,DinG,cas3,DEDDh,cas4 1 1 1 0
NZ_CP012186 Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence 0 crisprs NA 0 0 2 0
NZ_CP012185 Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence 0 crisprs WYL,csa3 0 0 3 0

Results visualization

1. NZ_CP012184
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012184_1 1511958-1512062 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012184_2 1679662-1679820 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012184_5 2815060-2815203 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012184_3 2814490-2814634 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012184_4 2814820-2814964 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012184_6 3777747-3777827 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012184_7 4028596-4028682 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP012184_7 7.1|4028622|35|NZ_CP012184|CRISPRCasFinder 4028622-4028656 35 NZ_CP012184.1 4028683-4028717 1 0.971

1. spacer 7.1|4028622|35|NZ_CP012184|CRISPRCasFinder matches to position: 4028683-4028717, mismatch: 1, identity: 0.971

gccgcaccccgtggcgggcgtcacgcaccccgtcg	CRISPR spacer
gccgcaccccgtggtgggcgtcacgcaccccgtcg	Protospacer
**************.********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP012184_3 3.1|2814514|36|NZ_CP012184|CRISPRCasFinder 2814514-2814549 36 NZ_CP042999 Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence 8631-8666 9 0.75

1. spacer 3.1|2814514|36|NZ_CP012184|CRISPRCasFinder matches to NZ_CP042999 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence) position: , mismatch: 9, identity: 0.75

gcccgcgagtgcggccaggtcctcccgggtgcgcgc	CRISPR spacer
ggccgcgaacgcggccaggtcctcccggtagtggtg	Protospacer
* ******..******************  *.*   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4254485 : 4306730 49 Rhodococcus_phage(10.0%) transposase,protease,integrase attL 4265342:4265358|attR 4304081:4304097
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP012186
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 20513 : 55620 37 Mycobacterium_phage(33.33%) transposase NA
DBSCAN-SWA_2 66345 : 148001 56 Mycobacterium_phage(37.5%) transposase,integrase attL 61449:61508|attR 78996:82251
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP012185
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 287635 : 343745 52 Mycobacterium_phage(37.5%) transposase,integrase attL 331194:331211|attR 348672:348689
DBSCAN-SWA_2 369220 : 394731 22 Mycobacterium_phage(28.57%) transposase NA
DBSCAN-SWA_3 621097 : 688980 56 Enterobacteria_phage(25.0%) transposase,integrase attL 618326:618342|attR 686027:686043
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage