CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP023489	Klebsiella pneumoniae subsp. pneumoniae strain ST101:960186733 plasmid p19-10_02, complete sequence	0 crisprs	RT,csa3	0	0	8
NZ_CP023488	Klebsiella pneumoniae subsp. pneumoniae strain ST101:960186733 plasmid p19-10_01, complete sequence	0 crisprs	RT,csa3,cas3	0	0	2
NZ_CP023487	Klebsiella pneumoniae subsp. pneumoniae strain ST101:960186733 chromosome, complete genome	5 crisprs	cas3,csa3,RT,DEDDh,DinG,WYL	2	2	10

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

27671 : 66335

Macacine_betaherpesvirus(17.65%)

holin,integrase,transposase

attL 36227:36243|attR 67017:67033

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094686393.1\|27671_28818_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.6e-145	91.5
WP_000019441.1\|29086_30067_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
WP_001568060.1\|30390_30765_-	hypothetical protein	NA	NA	NA	NA
WP_001568059.1\|30820_31147_-	hypothetical protein	NA	NA	NA	NA
WP_001568058.1\|31143_31872_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_055316681.1\|31868_32300_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_047066591.1\|32344_34402_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	2.6e-21	25.4
WP_001568055.1\|34471_34720_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_021314431.1\|34768_35311_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.0e-49	75.8
WP_004152756.1\|36139_36703_-	methyltransferase	M4M9L8	Vibrio_phage	1.7e-18	42.0
36227:36243	attL	NA	NA	NA	NA
WP_013054814.1\|36750_38106_-	DUF3560 domain-containing protein	NA	NA	NA	NA
WP_001568051.1\|38157_38388_-	hypothetical protein	NA	NA	NA	NA
WP_001568050.1\|38479_38707_-	hypothetical protein	NA	NA	NA	NA
WP_001568049.1\|39386_39707_-	hypothetical protein	NA	NA	NA	NA
WP_032421353.1\|39741_39996_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.6e-11	50.7
WP_004118478.1\|40232_40658_-	antirestriction protein	NA	NA	NA	NA
WP_004152753.1\|41178_41409_-	hypothetical protein	NA	NA	NA	NA
WP_004178082.1\|41642_43130_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004178083.1\|43532_43958_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.3e-31	49.6
WP_004152715.1\|43957_45229_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.6e-155	63.7
WP_004152062.1\|48008_48980_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	4.1e-150	86.6
WP_000523813.1\|48979_50146_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	1.4e-224	97.7
WP_004152063.1\|50897_51908_+	replication initiation protein	J9Q7H0	Salmonella_phage	8.8e-87	55.9
WP_001515717.1\|52624_53365_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	5.4e-25	58.6
WP_004152065.1\|54508_55456_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.8e-12	30.6
WP_071527918.1\|55482_55794_-	EAL domain-containing protein	NA	NA	NA	NA
WP_011977741.1\|55813_56782_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.5e-184	98.1
WP_004197688.1\|57454_57712_-	hypothetical protein	NA	NA	NA	NA
WP_080895248.1\|58331_59768_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004152070.1\|60750_62028_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_004178088.1\|62090_64088_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9
WP_085955172.1\|65127_66335_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
67017:67033	attR	NA	NA	NA	NA

DBSCAN-SWA_2

105511 : 181904

Escherichia_phage(25.0%)

protease,bacteriocin,integrase,transposase

attL 124013:124072|attR 137907:138727

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020314316.1\|105511_106858_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_004152113.1\|108700_109663_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_009483782.1\|109649_110399_-	phosphate-starvation-inducible PsiE family protein	NA	NA	NA	NA
WP_004152115.1\|110636_110834_-	hypothetical protein	NA	NA	NA	NA
WP_004152116.1\|110833_113629_-	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	5.2e-129	41.0
WP_004152117.1\|113743_114313_-	small heat shock protein sHSP20	NA	NA	NA	NA
WP_004152118.1\|114347_114629_-	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
WP_004118208.1\|114872_115136_-	hypothetical protein	NA	NA	NA	NA
WP_004118209.1\|115150_115414_+\|transposase	transposase	NA	NA	NA	NA
WP_000019473.1\|116615_117596_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004152692.1\|118804_119674_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152693.1\|119667_120678_-	phosphonate dehydrogenase PtxD	A0A1V0SBV6	Catovirus	1.4e-15	25.1
WP_004152694.1\|120686_121514_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_004152695.1\|121522_122386_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004153729.1\|122382_123210_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
124013:124072	attL	NA	NA	NA	NA
WP_001067855.1\|124065_124770_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001749967.1\|125176_125383_+	hypothetical protein	NA	NA	NA	NA
WP_072094655.1\|125794_127198_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	9.0e-106	50.6
WP_004098817.1\|127231_128446_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001389365.1\|128706_129471_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001144737.1\|129613_129880_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004201280.1\|130100_130574_-	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_000845048.1\|130729_131743_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001067855.1\|132332_133037_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000842134.1\|134056_135166_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	2.8e-33	30.2
WP_001039466.1\|135260_136445_-	tetracycline efflux MFS transporter Tet(D)	NA	NA	NA	NA
WP_000113282.1\|136540_137197_+	tetracycline resistance transcriptional repressor TetR(D)	NA	NA	NA	NA
WP_001067855.1\|137208_137913_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004201164.1\|138221_139034_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
137907:138727	attR	NA	NA	NA	NA
WP_004201167.1\|139037_139403_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_015058923.1\|139407_140067_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_162270619.1\|140679_140919_+	hypothetical protein	NA	NA	NA	NA
WP_004193231.1\|140893_141769_+	LysR family transcriptional regulator AmpR	NA	NA	NA	NA
WP_025999322.1\|141772_142138_-	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
WP_052238321.1\|142030_142366_+	ethidium bromide resistance protein	NA	NA	NA	NA
WP_000259031.1\|142359_143199_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000050481.1\|143603_145145_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000359986.1\|146543_147317_+	ArmA family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA
WP_077252464.1\|147297_147579_-	hypothetical protein	NA	NA	NA	NA
WP_002026779.1\|147798_147984_-	hypothetical protein	NA	NA	NA	NA
WP_002001451.1\|148032_149217_+\|transposase	IS4-like element ISEc29 family transposase	A0A0F7LAS3	uncultured_marine_virus	4.5e-50	35.4
WP_000052512.1\|149615_151091_+	ABC-F type ribosomal protection protein Msr(E)	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
WP_000155092.1\|151146_152031_+	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_004896925.1\|152389_152932_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|153816_154521_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001044210.1\|154526_154667_+	hypothetical protein	NA	NA	NA	NA
WP_001446887.1\|155152_155890_+	recombinase family protein	NA	NA	NA	NA
WP_000743213.1\|155886_156111_+	hypothetical protein	NA	NA	NA	NA
WP_000480972.1\|156832_157669_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082320.1\|157668_158472_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_001043260.1\|158532_159348_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_000954592.1\|159677_159854_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_000427619.1\|160035_161040_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_004152284.1\|161443_162454_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_004152286.1\|162914_163997_+	DNA-binding transcriptional repressor LacI	C6ZCU4	Enterobacteria_phage	6.8e-186	96.4
WP_004152287.1\|164118_167193_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.7
WP_003846917.1\|167244_168498_+	lactose permease	NA	NA	NA	NA
WP_000421673.1\|170203_172513_+	TerB N-terminal domain-containing protein	NA	NA	NA	NA
WP_004152291.1\|172516_173833_+	ATP-binding protein	NA	NA	NA	NA
WP_000093087.1\|173829_176025_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_013023768.1\|177472_178330_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_004171450.1\|178322_178400_-	RepA leader peptide Tap	NA	NA	NA	NA
WP_004099069.1\|178616_178895_-	replication regulatory protein RepA	NA	NA	NA	NA
WP_064762441.1\|179214_179694_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.4e-18	33.1
WP_099459485.1\|179995_180253_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_031944116.1\|180365_181904_-\|transposase	IS66-like element ISKpn24 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.2e-282	94.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP023489

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 9430

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004098982.1\|1222_2098_-	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	5.6e-82	56.4
WP_004197646.1\|2509_3781_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.2e-153	64.0
WP_001568036.1\|3780_4212_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
WP_004178082.1\|4617_6105_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_001568038.1\|6353_7325_+	hypothetical protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
WP_001568039.1\|7327_7999_+	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_001568040.1\|8061_8292_+	hypothetical protein	NA	NA	NA	NA
WP_001568041.1\|8728_9430_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2

DBSCAN-SWA_2

12977 : 13232

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057190393.1\|12977_13232_+	DNA polymerase III subunit theta	Q71T70	Escherichia_phage	8.5e-15	57.1

DBSCAN-SWA_3

16369 : 20654

Thalassomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152645.1\|16369_16933_+	methyltransferase	A8HNV9	Thalassomonas_phage	1.3e-18	34.1
WP_004152644.1\|17708_18251_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	6.0e-50	76.7
WP_004152643.1\|18299_18548_+	DUF905 domain-containing protein	NA	NA	NA	NA
WP_004178066.1\|18617_20654_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	9.0e-22	26.0

DBSCAN-SWA_4

24966 : 25788

Cronobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004178064.1\|24966_25788_+	DUF945 domain-containing protein	K4F5L3	Cronobacter_phage	2.6e-44	40.4

DBSCAN-SWA_5

59944 : 67643

Xanthomonas_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013023834.1\|59944_60670_+	type-F conjugative transfer system pilin acetylase TraX	A0A1D6ZIU7	Xanthomonas_phage	1.2e-05	28.3
WP_055316667.1\|60741_61335_+	fertility inhibition protein FinO	NA	NA	NA	NA
WP_013023836.1\|61495_62098_+	hypothetical protein	NA	NA	NA	NA
WP_004153014.1\|62147_62792_+	hypothetical protein	NA	NA	NA	NA
WP_014343480.1\|62847_63498_+	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_004152383.1\|63494_63803_+	hypothetical protein	K7PKY8	Enterobacterial_phage	1.1e-08	31.7
WP_014343478.1\|63978_64458_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	2.7e-17	31.7
WP_013609506.1\|64575_64845_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_014386216.1\|65076_65154_+	RepA leader peptide Tap	NA	NA	NA	NA
WP_004099067.1\|65146_66004_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_040119813.1\|66968_67643_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	9.7e-82	61.3

DBSCAN-SWA_6

75545 : 112216

Escherichia_phage(46.15%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040119823.1\|75545_77084_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-10	26.5
WP_040119807.1\|77080_77749_+	cysteine hydrolase	NA	NA	NA	NA
WP_040119806.1\|77785_78505_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001067855.1\|78740_79445_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_077267240.1\|81754_82162_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_044257535.1\|82525_83458_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_032489965.1\|83648_84455_+	ABC transporter permease	NA	NA	NA	NA
WP_072193875.1\|84492_85260_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-28	37.3
WP_085955172.1\|87617_88825_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
WP_044257530.1\|90053_90551_+	DinB family protein	NA	NA	NA	NA
WP_001067855.1\|90829_91534_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001549940.1\|91686_92589_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_024194857.1\|93079_93271_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|93373_94078_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001549941.1\|94296_95259_-	carbamate kinase	NA	NA	NA	NA
WP_001549942.1\|95255_96677_-	DUF1116 domain-containing protein	NA	NA	NA	NA
WP_055316428.1\|96686_98237_-	acyl-CoA synthetase FdrA	NA	NA	NA	NA
WP_044257108.1\|98332_99211_-	DUF2877 domain-containing protein	NA	NA	NA	NA
WP_100160450.1\|99408_100719_-	purine permease	Q9KX94	Enterobacteria_phage	4.4e-30	27.2
WP_001549947.1\|100834_101938_-	ring-opening amidohydrolase	NA	NA	NA	NA
WP_001549948.1\|101990_103226_-	hypothetical protein	NA	NA	NA	NA
WP_100160451.1\|103673_104642_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	6.3e-183	97.8
WP_016947617.1\|104888_105869_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	98.8
WP_000780222.1\|106146_106428_-	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
WP_000493286.1\|106408_106738_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2
WP_001572362.1\|107783_108806_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001067855.1\|108958_109663_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001137910.1\|110270_110591_+	DUF134 domain-containing protein	NA	NA	NA	NA
WP_000626969.1\|110565_111027_+	hypothetical protein	NA	NA	NA	NA
WP_016241611.1\|111187_111625_+	PaaI family thioesterase	NA	NA	NA	NA
WP_000043177.1\|111739_112216_+	DNA starvation/stationary phase protection protein	G0X506	Salmonella_phage	6.7e-05	28.7

DBSCAN-SWA_7

117744 : 118449

Escherichia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001572363.1\|117744_118449_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.0e-139	99.6

DBSCAN-SWA_8

122697 : 123492

Macacine_betaherpesvirus(100.0%)

integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004197635.1\|122697_123492_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.5e-52	88.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP023487

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023487_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023487_1

1655425-1655533

Orphan

Consensus_repeat	Method
TGTCCCACCCTGTACCACTTTTTTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023487_1

>merge|NZ_CP023487|1|1655425-1655533|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTAAACCAAATTCTGTAATGTGGGACGCTGAAACCCGCGCCAGCTCTGCGTGTACCACTTGTCCCACCCTGTACCACCTTTTTTTA

>NZ_CP023487|1|1|1655425-1655533|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTAA	ACCAAATTCTGTAATGTGGGACGCTGAAACCCGCGCCAGCTCTGCGTGTACCACT
TGTCCCACCCTGTACCACCTTTTTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023487.1\|WP_032418451.1\|1653863_1654385_-\|PTS-glucitol/sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
NZ_CP023487.1\|WP_032418458.1\|1657656_1657872_-\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP023487.1\|WP_032418453.1\|1654497_1654782_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|372675
NZ_CP023487.1\|WP_032418449.1\|1653492_1653867_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|226254
NZ_CP023487.1\|WP_002914160.1\|1666330_1666672_-\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|183190
NZ_CP023487.1\|WP_004174799.1\|1666819_1668481_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|236781
NZ_CP023487.1\|WP_123836165.1\|1648811_1649357_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_002914164.1\|1664914_1665397_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP023487.1\|WP_032418445.1\|1650201_1650360_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_032418459.1\|1658353_1662157_-\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_032418456.1\|1655551_1657621_-\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NZ_CP023487.1\|WP_032418447.1\|1651491_1652505_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP023487.1\|WP_071549035.1\|1665507_1665984_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
NZ_CP023487.1\|WP_032418448.1\|1652515_1653496_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NZ_CP023487.1\|WP_087757875.1\|1654876_1655233_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP023487.1\|WP_032418461.1\|1662994_1664242_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|170049
NZ_CP023487.1\|WP_032418460.1\|1662345_1662993_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_032418444.1\|1649378_1649828_-\|phage-virion-morphogenesis-protein	unknown	unknown	gnl\|CDD\|368274
NZ_CP023487.1\|WP_071844617.1\|1650844_1651051_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_004145682.1\|1665973_1666264_+\|RnfH-family-protein	unknown	unknown	gnl\|CDD\|234982

Protein	Function_ID	Function_description	E-value
NZ_CP023487.1\|WP_032418451.1\|1653863_1654385_-\|PTS-glucitol/sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	6.94718e-79
NZ_CP023487.1\|WP_032418453.1\|1654497_1654782_-\|transcriptional-regulator	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	1.06433e-37
NZ_CP023487.1\|WP_032418449.1\|1653492_1653867_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	3.73192e-58
NZ_CP023487.1\|WP_002914160.1\|1666330_1666672_-\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|183190	PRK11548, PRK11548, outer membrane protein assembly factor BamE.	5.2573e-82
NZ_CP023487.1\|WP_004174799.1\|1666819_1668481_-\|DNA-repair-protein-RecN	gnl\|CDD\|236781	PRK10869, PRK10869, recombination and repair protein; Provisional.	0
NZ_CP023487.1\|WP_032418458.1\|1657656_1657872_-\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	5.83127e-21
NZ_CP023487.1\|WP_087757875.1\|1654876_1655233_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.98259e-09
NZ_CP023487.1\|WP_032418456.1\|1655551_1657621_-\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
NZ_CP023487.1\|WP_032418447.1\|1651491_1652505_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.08412e-65
NZ_CP023487.1\|WP_071549035.1\|1665507_1665984_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	3.17506e-105
NZ_CP023487.1\|WP_032418448.1\|1652515_1653496_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.71362e-173
NZ_CP023487.1\|WP_002914164.1\|1664914_1665397_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	5.43734e-87
NZ_CP023487.1\|WP_032418461.1\|1662994_1664242_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	7.36952e-145
NZ_CP023487.1\|WP_032418444.1\|1649378_1649828_-\|phage-virion-morphogenesis-protein	gnl\|CDD\|368274	pfam05069, Phage_tail_S, Phage virion morphogenesis family. Protein S of phage P2 is thought to be involved in tail completion and stable head joining.	6.12186e-39
NZ_CP023487.1\|WP_004145682.1\|1665973_1666264_+\|RnfH-family-protein	gnl\|CDD\|234982	PRK01777, PRK01777, RnfH family protein.	7.65271e-47

>NZ_CP023487.1|WP_087757875.1|1654876_1655233_+|helix-turn-helix-transcriptional-regulator
MPEDGCCPERDNSCIFRCRVAIVIGKRLKISRVRADLTQAELGVLAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGRTLLFSPNP
>NZ_CP023487.1|WP_032418453.1|1654497_1654782_-|transcriptional-regulator
MKKSTTKDWHPADIIAALHKRGTSLAKLSREAGLASSTLSNTLTRAWPKGEWLIAIALDVHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>NZ_CP023487.1|WP_032418451.1|1653863_1654385_-|PTS-glucitol/sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTIRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSKRGNVP
>NZ_CP023487.1|WP_032418449.1|1653492_1653867_-|PTS-glucitol/sorbitol-transporter-subunit-IIA
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLMLAGHDYLVTAVGKGAQQALFELGHLTLVFNGDLNPCHTGTVHLSGPVPNLRDLHGNLVIEEGRP
>NZ_CP023487.1|WP_032418448.1|1652515_1653496_-|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEIVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAHFITEENYVSDVTMEQLVLVDTAEAPDSEPEITPEPALRVITTPPPPRGAEKLVRMVEQTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHAMTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>NZ_CP023487.1|WP_032418447.1|1651491_1652505_-|Gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGVIGYTRLDVLLQEEAIDVVSVATPDPYHTESILTALRHGKHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDLAVMRIKAELEKPEAGRILRGHISMDDVISVPTEWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWVVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHLGLEITTPGMTLTPNSYFINYRNGIASGFGIDPINDFVRAVRNRSPYPVTAVDGLAVSRICEAVHRSLKSGKPEKI
>NZ_CP023487.1|WP_071844617.1|1650844_1651051_-|hypothetical-protein
MESEHEAINIALTIENGVVTNVRQIRKDEHIASLETFLWIVKRAGYEVVPPQESTQDPENIKVLAEVE
>NZ_CP023487.1|WP_032418445.1|1650201_1650360_-|hypothetical-protein
MPGSDPTTNGDLSADIRQLVSALEGCALQVRTVKNCQDKIDVQAKESAKSLN
>NZ_CP023487.1|WP_032418444.1|1649378_1649828_-|phage-virion-morphogenesis-protein
MNDFKPFDDKLAGLIAALSPTARRKMAADIAKPLRARQQRRIKTQKAPDGTPYAARKRQPVKAKKDRVKREMFAKLRISRFMKATAGNDVAVVEFTGKVQRMVNVHQYGLKDKPSPNSGSVEYPARILLGFSPSDIDFASTKIVNYLSE
>NZ_CP023487.1|WP_123836165.1|1648811_1649357_-|hypothetical-protein
MRKLSKGNEGAIDKKIELMIKVIIRTDSYLNSANTKSTILLSLSSALLVALSVNFKNITGMVIVDSDKAVLAVLISLMIFLLITSIVFSLRGITPYIKPSTVSNTFSFVDISINFHELHLYKERFNSVSKLEYLNELISLNHNLSKALVAKYNKQITAITCIEATAYVLCFSVYMIIIANC
>NZ_CP023487.1|WP_032418456.1|1655551_1657621_-|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRIWRKDPEREDDVPPVVLGPDELADLDNLTIIRPDTLYVRVLRTGDIREEELLKIAVKLAHAGVQMARLMSPDGELLEDWSGQLARLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDDSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTYISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPGGDNIILQGSHYLTGGFAQAGTLAEWQGQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERLYAGMDVRMVQIPSDTGNHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQTALMPENAGNQVQRIVARFALLAVAGEMATLQGITGWQEGTAYGAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMVGFRRVEKDPLTGEEYTLFHILPEGWREMCRGFSPARAARLCLEAECLLPGSDGKYQSQVRLPEIGKARVYRLTSRILSI
>NZ_CP023487.1|WP_032418458.1|1657656_1657872_-|AlpA-family-transcriptional-regulator
MKTRADNNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRAAIR
>NZ_CP023487.1|WP_032418459.1|1658353_1662157_-|DNA-binding-protein
MALLDKIKSLISANETATQNIEEESVYDTLTPKIITDSSVKHYFDALDFAFSKQDVKNIAITGPYGAGKSTVIQSYLKTHLNREFINVSLADFSLSGKSDEAPLENSEIELSILQQILYKENKDNLPDSRIDRIQNRNKKHISSLFLTVLSVVAPLLLLAITIFPKYFFSLFGATEPTINVIVNMFPERFFVSIIMGLLCLFFIVRVASKAGIFDKKIKLSKIAFLQGSADMASQESSSLLNNCLDEIVYFFSRSQYKIVVFEDLDRLGNAEVFVKLREINQIVNNNLQSEPVRFIYACRDDIFLGADIRTKFFDFILPVIPVMDARNAYTHLKNKLYDFPENEQPLLKQMSLYISDMRSLQNIVNEFNLFKKVVDDNTNQAKIFALIFYKNIYAQDYNLTDKKSGVLYSFIHNYRLRKLHENHFKLLDQRLEELNNKLVKIRKESVSTDAELRKQIISRFISPELWPIVYFIKDTGNYHQRYIKFSAESFYNSEHEFINYFEQNSSLYIGYPFNGNQHQLAKIDSTSIIEEYKQRNILISSNRDDAYKKTTKEIEELKENIRTRNAISLANLLKIIGWENFRTIAEEYIATCDDRTIIDPEQLETIRNGFRFGGFEALYYLLTNGYIMQDFMMFRSIFNQGTISANDNDYIKAVGRYIGCEEANQTFLLDNSKDVLAELVGQHYQYREGALHHQIIAFLLDSQDNQDHKTLSAMIAMIFRQPASVIIAIFKILEDRFINVDYFTRLVVSSLSENKYLDKMISVLKEQEHNAISKSIASKMIALVSPDISTDQKNYQKFIEDLGFSLVSEVEPNNLQYFLHNIEQLQVIYHDIYLPVTPNEMKALNFIGDHQMYPLDRATYRVVVAGLLQSDNVTCEMVDDLPWSLLDKHQLSKIKVYVNDNINIFVKDIFIDSKESSNAIVSVITHSDLSDELKILILEKMQFTVTGLNEFPEYIDVDGNELSYHDLFYRYDHVTPGWEALLAYICEECNLEILTQYIENYADVLSQEAINLMEGDRYDLLYMKVICNDNLSDSAYAAILEPVYINTHHWDERMSLKNLYRLIKNRKIELDPETFKQAIQYFISNNDLKRIEPFVLWFSQFKDNFFPNIEYYLCVNQDDVFFKESLIGINNSHVFTLQEKSSILFKCREHYELSLFEELTISNEGLIALVNTSTDDNFTIYVIIKLLKNGYRSRTEIAHFVSRLEEKEYTKIFYQKSATLNLDKPQEAELFLSALQQANLIKKWTLRDVGKYYVQCRYEEDESYLD
>NZ_CP023487.1|WP_032418460.1|1662345_1662993_-|hypothetical-protein
MTSPIRQNLFERECDMPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPPEIKARSLKAVMKLSRNSRGRKWLKTLGDDALPDLTTSAQPSQRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDRILRKLRALAQERELPSDGLGRGTFYEVLKMGRERKYR
>NZ_CP023487.1|WP_032418461.1|1662994_1664242_-|tyrosine-type-recombinase/integrase
MPKQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKVWHFEYYHPITKKRTKTSLGPYPVVTLAMARETRTQYRRLLYQGIDPRQHLAGIAEEKRIQTECTLEKVAGQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGSTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLTLQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSIARTAGAGHFPREVLESALAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGEEEPLRIVEGE
>NZ_CP023487.1|WP_002914164.1|1664914_1665397_-|SsrA-binding-protein-SmpB
MTKKKAHKPGSATIALNKRARHEYFIEDEYEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAFLFGANFTPMAVASTHYVCDPTRTRKLLLNQRELDTLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRTDLKDREWALDKARIMKHAGR
>NZ_CP023487.1|WP_071549035.1|1665507_1665984_+|type-II-toxin-antitoxin-system-RatA-family-toxin
MILFALCLNVEPAMPQISRTALVPFSAEQMYQLVNDVKSYPDFLPGCTGSRVLEFGPTQMTAAVDVSKAGISKTFTTRNTLTSNQSILMSLVDGPFKKLIGGWKFIPLSPEACKIEFHLDFEFTNKLIEMAFGRVFKELAANMVQAFTSRAKEVYSAS
>NZ_CP023487.1|WP_004145682.1|1665973_1666264_+|RnfH-family-protein
MPANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPVKLHDEVHDGDRVEIYRPLIADPKELRRQRAEKSAAK
>NZ_CP023487.1|WP_002914160.1|1666330_1666672_-|outer-membrane-protein-assembly-factor-BamE
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLAPNDVAKIRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQEPGHQKVTQQTLTLTFNSGGVLTNIDNKPALTSQ
>NZ_CP023487.1|WP_004174799.1|1666819_1668481_-|DNA-repair-protein-RecN
MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGATRADLCARFALKDTPAAQRWLEENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMAEHYRQWHQSCRELAQHQQQSQERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEANLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFELEQRISRQIALARKHQVMPEELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALETARQLHALRQASADELTQLITESMHSLSMPHGVFAIEVAFDERHLTADGADHIEFRVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA

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Crispr_ID: NZ_CP023487_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023487_2

2216947-2217209

Orphan

Consensus_repeat	Method
AGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTGA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP023487_2

>merge|NZ_CP023487|2|2216947-2217209|PILER-CR
AGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTGATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCAGTGTGGCGGCTGCGTCTGACCCGGCCTGGATTATACGGTGGGTGTGATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTCA

>NZ_CP023487|2|1|2216947-2217209|PILER-CR
AGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTGA	TACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGA
AGCGCCATCAGGCAGTGTGGCGGCTGCGTCTGACCCGGCCTGGATTATACGGTGGGTGTGA	TACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGA
AGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023487.1\|WP_032418662.1\|2221062_2221692_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|214471
NZ_CP023487.1\|WP_032418660.1\|2212636_2213485_+\|DNA-3-methyladenine-glycosylase-2	unknown	unknown	gnl\|CDD\|236671
NZ_CP023487.1\|WP_020324291.1\|2222238_2222361_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_102097631.1\|2228477_2229485_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_004151141.1\|2208284_2208986_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP023487.1\|WP_032419447.1\|2209000_2210857_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP023487.1\|WP_001741945.1\|2219779_2220670_+\|GalU-regulator-GalF	unknown	unknown	gnl\|CDD\|182252
NZ_CP023487.1\|WP_032418664.1\|2222651_2224085_+\|capsule-assembly-Wzi-family-protein	unknown	unknown	gnl\|CDD\|379441
NZ_CP023487.1\|WP_004180531.1\|2214943_2216791_+\|outer-membrane-assembly-protein-AsmA	unknown	unknown	gnl\|CDD\|236772
NZ_CP023487.1\|WP_004151147.1\|2217430_2219014_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP023487.1\|WP_032418667.1\|2225820_2227989_+\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|183173
NZ_CP023487.1\|WP_032418658.1\|2205631_2206906_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|224220
NZ_CP023487.1\|WP_162900877.1\|2225362_2225806_+\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|182256
NZ_CP023487.1\|WP_032418666.1\|2224229_2225363_+\|polysaccharide-export-protein	unknown	unknown	gnl\|CDD\|237903
NZ_CP023487.1\|WP_004151143.1\|2211146_2212499_-\|molecular-chaperone	unknown	unknown	gnl\|CDD\|236954
NZ_CP023487.1\|WP_009483956.1\|2207179_2207791_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|197715
NZ_CP023487.1\|WP_002912442.1\|2213599_2214241_+\|uridine-kinase	unknown	unknown	gnl\|CDD\|235492
NZ_CP023487.1\|WP_004146563.1\|2207906_2208047_-\|small-membrane-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_004151145.1\|2214331_2214913_+\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|274062
NZ_CP023487.1\|WP_077261140.1\|2229520_2230588_+\|glycoside-hydrolase-family-99-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|211420

Protein	Function_ID	Function_description	E-value
NZ_CP023487.1\|WP_032418662.1\|2221062_2221692_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|214471	smart00014, acidPPc, Acid phosphatase homologues.	9.62171e-17
NZ_CP023487.1\|WP_032418660.1\|2212636_2213485_+\|DNA-3-methyladenine-glycosylase-2	gnl\|CDD\|236671	PRK10308, PRK10308, 3-methyl-adenine DNA glycosylase II; Provisional.	1.93566e-179
NZ_CP023487.1\|WP_032418664.1\|2222651_2224085_+\|capsule-assembly-Wzi-family-protein	gnl\|CDD\|379441	pfam14052, Caps_assemb_Wzi, Capsule assembly protein Wzi. Many bacteria are covered in a layer of surface-associated polysaccharide called the capsule. These capsules can be divided into four groups depending upon the organisation of genes responsible for capsule assembly, the assembly pathway and regulation. This family plays a role in group 1 capsule biosynthesis. It is likely to be involved in the later stages of capsule assembly. It is likely to consist of a beta-barrel structure.	1.13171e-133
NZ_CP023487.1\|WP_004151141.1\|2208284_2208986_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.98041e-36
NZ_CP023487.1\|WP_032419447.1\|2209000_2210857_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.38058e-41
NZ_CP023487.1\|WP_001741945.1\|2219779_2220670_+\|GalU-regulator-GalF	gnl\|CDD\|182252	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF.	0
NZ_CP023487.1\|WP_004180531.1\|2214943_2216791_+\|outer-membrane-assembly-protein-AsmA	gnl\|CDD\|236772	PRK10833, PRK10833, putative assembly protein; Provisional.	0
NZ_CP023487.1\|WP_004151147.1\|2217430_2219014_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	9.01248e-99
NZ_CP023487.1\|WP_032418667.1\|2225820_2227989_+\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|183173	PRK11519, PRK11519, tyrosine-protein kinase Wzc.	0
NZ_CP023487.1\|WP_032418658.1\|2205631_2206906_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|224220	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion].	5.58793e-108
NZ_CP023487.1\|WP_032418666.1\|2224229_2225363_+\|polysaccharide-export-protein	gnl\|CDD\|237903	PRK15078, PRK15078, polysaccharide export protein Wza; Provisional.	0
NZ_CP023487.1\|WP_004151143.1\|2211146_2212499_-\|molecular-chaperone	gnl\|CDD\|236954	PRK11678, PRK11678, putative chaperone; Provisional.	0
NZ_CP023487.1\|WP_009483956.1\|2207179_2207791_-\|response-regulator-transcription-factor	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	0.00203687
NZ_CP023487.1\|WP_002912442.1\|2213599_2214241_+\|uridine-kinase	gnl\|CDD\|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	1.7406e-147
NZ_CP023487.1\|WP_162900877.1\|2225362_2225806_+\|protein-tyrosine-phosphatase	gnl\|CDD\|182256	PRK10126, PRK10126, low molecular weight protein-tyrosine-phosphatase Wzb.	2.45736e-66
NZ_CP023487.1\|WP_004151145.1\|2214331_2214913_+\|dCTP-deaminase	gnl\|CDD\|274062	TIGR02274, Probable_deoxycytidine_triphosphate_deaminase, deoxycytidine triphosphate deaminase. Members of this family include the Escherichia coli monofunctional deoxycytidine triphosphate deaminase (dCTP deaminase) and a Methanocaldococcus jannaschii bifunctional dCTP deaminase (3.5.4.13)/dUTP diphosphatase (EC 3.6.1.23), which has the EC number 3.5.4.30 for the overall operation. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	1.60713e-93
NZ_CP023487.1\|WP_077261140.1\|2229520_2230588_+\|glycoside-hydrolase-family-99-like-domain-containing-protein	gnl\|CDD\|211420	cd11579, Glyco_tran_WbsX, Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases. Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.	4.85027e-35

>NZ_CP023487.1|WP_004180531.1|2214943_2216791_+|outer-membrane-assembly-protein-AsmA
MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQLSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAVRDSSAPVVPHDNTLPLAPEDRGWSYDVRQLQVADSVLFFQHENGEQVTVRDIRLQMEQDENHRATVDFSGRVNRDQRDLALNFSATVQGGDYPHSLKADFTQLSWQLRGAELPPDGINGQGSLQASWQEDDKTLRFDNLNLMANRSTVTGSGSVVLGDRPDWSLDLHATTLDLDSLLAQRSPATDSSASQQGQSQTRPLRPVIADSDEREDYQSLRGFNGRMALSADQLQWRGLNFTQVQSEISNQQGLLTVSKMQGNLDGGQLSLPGTLDARGDTPLATFQPALQNVEIGSLIKAFNYSLNLTGKLSLSGEFSGTRIDADDFRRHWQGQAQLQMADTRTEGLNFQQLVQQAVERSTNVRAQENYDNATRLDSVSSRLTLDNGLVTLNRLQGQSDVMAMTGEGQLDLQKENCDMRFNVRVLGGWKGEGKLIDRLKQTAIPLRIYGEWQSLSYSLQVDQILRKQLQDEAKQRLNDWVERNKGSKDGNDAKKLLDKL
>NZ_CP023487.1|WP_004151145.1|2214331_2214913_+|dCTP-deaminase
MRLCDRDIEAWLDEGRLAINPRPPVERINGATVDVRLGNKFRTFRGHTAPFIDLSGPKAEVSAALDRVMSEEIVLPEGEAFFLHPGELALAVTYESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMPIGALSFEPLSGPAARPYNRREDAKYRDQQGAVASRIDKD
>NZ_CP023487.1|WP_002912442.1|2213599_2214241_+|uridine-kinase
MTDMSHQCVIVGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEERVKTNYDHPSSMDHSLLFQHLQMLKSGQPIELPVYSYVEHTRTPNTIHVEPKKVIILEGILLLTDARLRNELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
>NZ_CP023487.1|WP_032418660.1|2212636_2213485_+|DNA-3-methyladenine-glycosylase-2
MVLLPWTPPYDWAWMVGFLQARAVAGVERFHDGGYSRSFGVEGHRGLIHLAPDEEAQGLRVTLSPGLQPVAEICYARIGQLFDLACDPRQVARTLGDLPQARPGLRLPGALDAFEQAVRAVLGQLVSVAMAARLTAKVAAGWGEPLAEAPGYVLFPTPEALSRADPQALKALGMPLRRAEALIHLARAALNGELPLTAPADIDAGLRQLQTLPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAAIARYARRWQPMRSYALLHIWYTDDWAPAAE
>NZ_CP023487.1|WP_004151143.1|2211146_2212499_-|molecular-chaperone
MFIGFDYGTANCSVAVMRENTPQLLTLENGSALLPSMLCAPTREAVSEWLYRHHDVPTHSDENQALLRRAIAANRDEDIEVLRNSVQFGLASLQQYVEDPEEVYFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIKLQAESQLPEQIDQAVIGRPINFQGLGGDEANAQAQGILERAAHRAGFRDVVFQFEPVAAGLDFEATLSEEKRVLVVDIGGGTTDCSLLLMGPQWRERADRQQSLLGHSGCRIGGNDLDIALAFKCLMPLLGMGGETEKGTALPILPWWNAVAINDVPAQSDFYSTANGRLLNDLLRSARDADKVALLLKVWRQRLSYRLVRSAEESKIALSSAASVETALPFIQDDLATAIAQQGLEAALDQPLTRIMEQVRLALDSSQTTPDVIYLTGGSARSPLIKKALAAQLPGIPLAGGDDFGSVTAGLARWAQVVFR
>NZ_CP023487.1|WP_032419447.1|2209000_2210857_-|sensor-histidine-kinase
MLLVAPQAQAATRQVGIDIPVQWYADASGQMTLDRFAALPTDQLATTRQIPSFGYSRKTWWLRSELPGTWFAGEPRWLQLGPSFVDHLTIYYRPLGSDAPWAQRTFGDRDGARESDLHYRESVLILPPPPTAAGYEVVFRLQSTSTLILLASLSSPQEFVQRATADTAFWSFYFGLAAVASGVALWLALALRRRLLWGICLFSLNYPLVAALHGFPEWFFGHAALPFQDFMISSLSLFSYATALWLHSEIFDLKKNMPRLHQLLIAAVILNLVLQVSIPLGFYGFAMQIEGVVFIIITPVLLFTSWWLWRKKAIDRTTLLLGLLPPFYVVAAVLVQLSIHGIIPFHMAIYSLWQYALIVHIITVLIIAILRVRAENRQLEQKQRLARELQIEREASFHQRQFMGMVAHEFRTPLAVIQAALENLRLSAASTSQEARFDRIGRAATRLVQLTDNCLADARLASHDLHVERQQTALLTVINMAASVVAISHDHYLNIRQHGAVESPQLQADAGLLCIAIANLLDNAVKYSPPGEIAIDIHSDAGQTELRIRDHGPGLPAGQAELIFERYRRGEHTSPVPGGTGLGLYVARQIVQAHDGKLWLAEHGPDGCTFILTLPTVA
>NZ_CP023487.1|WP_004151141.1|2208284_2208986_-|response-regulator-transcription-factor
MALRLAIIEDNADLLDELLAWLGYRGFEVWGTRSAEAFWRQLHSHPVDIVLVDIGLPGEDGFSVLNYLHELGHYGLVVVSARGQQQDKLQALSLGADAYLIKPVNFAHLAETLTALGARLRQDRPAAPPAEAIGTPPAVSPGSWRLQEDKLISPDARTLELTQQEYRLVELLMRNRNEVCSKLDLHACLFSHESEPDLHRIDVVVSRLRHKARQQGIHLPVRAIFGKGLAFIS
>NZ_CP023487.1|WP_004146563.1|2207906_2208047_-|small-membrane-protein
MAMQTWLVLLLCIFFFSISVYSFISYLKDRRRQKFTFNDKRSMRRK
>NZ_CP023487.1|WP_009483956.1|2207179_2207791_-|response-regulator-transcription-factor
MRNINVTINTRNAFVRESLVAMVNDLTRGDLRARFSWRNTDLSAEDIIICEVIPGEIYLCNTLIKNRKRGSSLIILHSYDQLPEDEFMINCLKGVIFVSLKTASIPQLLTIIKSELQHCMTPTATDAAGRELSCASCPHRVLSRSQTAVVHGILEGLDMSKIAALQRVSPRTAAYHKNKIMEKYSLNNNHEFFQFMNLLRERW
>NZ_CP023487.1|WP_032418658.1|2205631_2206906_+|dicarboxylate/amino-acid:cation-symporter
MANANKLTLFIVIFMLMGILSGAAIHAYATPTTISAWADNITLLTDLFLRLIKMVIAPLVFSTLTVGIMRLGETATIGRVGGKAMVWFITSSVLSILVGLVIVTFQHPGAGLNLAVPKEAVDTGLAVSGMSLKGFLSHTIPTSITEAMANNEILQIVVFSMFFGIAGASLGEKFNAPLVAALNVVSHIMLKVTGYVMYVAPLAIFAAISSVIASQGLGILLNYASFIGGYYLAVLLTSSVLIAVGYMVLKKEVFRLLNMLKDPVLVAFTTSSSEAAYPKTLERLVKFGCSRNIVSFVLPIGYSFNLVGSMVYCSFAAMFIAQAYNVPLSFSEITVMMLTLMLASKGIAGVPRSALVVLAATIPSFNIPVAGILLLMGIDHFLDMGRSAINVLGNGIATAMLSKNEGLLTDEEAQPDWEVEKAEA
>NZ_CP023487.1|WP_004151147.1|2217430_2219014_-|TerC-family-protein
MEWIADPSIWAGLVTLVVIELVLGIDNLVFIAILAEKLPPAQRDRARITGLMLAMVMRLLLLASISWLVTLTKPLIVFHDFSFSARDLIMLFGGLFLLFKATVELNERLEGKDSDNPTQRKGAKFWAVVAQIVVLDAIFSLDSVITAVGMVDHLAVMMAAVVIAISLMLMASKALTRFVNSHPTIVILCLSFLLMIGFSLIAEGFSFIIPKGYLYAAIGFSVMIEALNQLAQFNRRRFLSANMTLRQRTTEAVMNLLSGQKEKAELDADTASLVADQDQHPLFNPQERLMIERVLNLNQRSVSSIMTSRHDIERINLSAPEEEIRSLVEKNQHTRLVVTGGKDNEDLLGVVHVIDLLQQSLRQEPLDLQALVRQPLVFPEGLPLLSALEQFRQARTHFAFVVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQHHQDGSWTVNGHMPLEDLVQYVPLPLDDKREYHTVAGLLMEYLQHVPQVGETIEIDGYTLRTLQVDSHRVQKVQIVPPVKQDELDYEV
>NZ_CP023487.1|WP_001741945.1|2219779_2220670_+|GalU-regulator-GalF
MANLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEIVLVTHSSKNAVENHFDTSYELEALLEQRVKRQLLAEVQAICPPGVTIMNVRQAQPLGLGHSILCARPVVGDNPFVVVLPDIILDGGTADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPMVAEGQVARIVEFIEKPDEPQTLDSDLMAVGRYVLSADIWAELERTEPGAWGRIQLTDAIAELAKKQSVDAMLMTGESYDCGKKMGYMQAFVTYGMRNLKEGAKFRESIKKLLA
>NZ_CP023487.1|WP_032418662.1|2221062_2221692_+|phosphatase-PAP2-family-protein
MNWQLISFFGDSTVLLPSAAALFIVLMLRKTSRLLAWQWGLLFGITGAIVCASKLAFMGWGLGIRELDYTGFSGHSALSAAFWPIFLWLLSARFSVGLRKAAVITGYVLAAVVGYSRLVIHAHSVSEVIAGLLLGAAGSALFLVLQKRTSDPESVNISWGGVACLVMVPLILLHSGSKAPTQSLLGQIATAVGPLDKPFTRTDLHKQVW
>NZ_CP023487.1|WP_020324291.1|2222238_2222361_-|hypothetical-protein
MMIILTGSIFTAVEENLCAAASGFSDATAPGLTATSALTT
>NZ_CP023487.1|WP_032418664.1|2222651_2224085_+|capsule-assembly-Wzi-family-protein
MIKIARIAATLGLLSSLGAQAYAAGLVVNDNDLRNDLAWLSDRGVIHLSLSTWPLSQEEISRALKKAKPSYSSEQVVLARINQRLSALKADFRVTGYTSTDQPGTPQGFGQTQPADNSLGLAFNNSGEWWDVHLQGNVEGDERISNGSRFNANGAYGAVKFWNQWLSFGQMPEWWGPGYEGSLIRGDAMRPMTGFLMQRAEQAAPETWWLRWVGPWQYQISASQMNQYTAVPHAKIIGGRFTFSPFQSLELGASRIMQWGGEGRPQSFSSFWDGFTGKDNTGTDNEPGNQLAGFDFKFKLEPTLGWPVSFYGQMIGEDESGYLPSANMFLGGVEGHHGWGKDAVNWYVEAHDTRSNMSRTDYIYTHHIYKDGYYQQGYPLGDAMGGDGQLIAGKVELITEDNQRWSTRIVYAKVNPENQSINKAFPHADTLKGVQLGWSGDVYQSVRLNTSLWYTNADNSDRDDVGASAGIEIPFSL
>NZ_CP023487.1|WP_032418666.1|2224229_2225363_+|polysaccharide-export-protein
MKKKIVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLIDQLRPETVLARPNPQLDNLLRSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNSDGTIFYPYIGKLQVAGKTISQVRQDIASRLTTYIESPQVDVSIAAFRSQKTYVTGEVVKSGQQPITNIPLTVMDAINNAGGLAPDADWRNVVLTHNGKDTKISLYALMQKGDLSQNHLLYPGDILFVPRNDDLKVFVMGEVVKQATMKMDRSGMTLAEALGNAEGISQEMSDATGVFVIRQLKDDKQGKIANIYQLNAQDASAMVLGTEFQLQPYDIVYVTTAPLVRWNRVISQLVPTITGVHDMTETGKFIRTW
>NZ_CP023487.1|WP_162900877.1|2225362_2225806_+|protein-tyrosine-phosphatase
MAMLNSILVVCTGNICRSPIAERFLRQGLPNMKIDSAGTGALIGHEADESAVKIAAFHGLSLDGHKGQQFTSSLGRHYDLILVMEKKHLEQISQISPEARGKTMLFGHWLGSRDIPDPYHKSEEAFSSVYQLIEQSGLRWIEKIGAK
>NZ_CP023487.1|WP_032418667.1|2225820_2227989_+|polysaccharide-biosynthesis-tyrosine-autokinase
MSSVNNKLITNDADEIDLGRLLGELVDHRKLIIAVTSLFTLCALIYALFATPIYQADALIQVEQKQANAILSNLSQMLPDSQPQSEPEIALLKSRMILGKTVDDLNLQAVIKPKYFPIFGRGWQRLSGKKDGELVVSRLYLPTSEDIDVPKVELTVKDNEHFVVKGDDFTFNGKVGELLDDKGISIKVDKIDAEPGSKFTISYITRLEAITKLQEVLSVADQGKDTGILVLSITGDNPELITNIIDSISNNYLSQNIARQAAQDAKSLEFLSNQLPKVRNDLDVAEDKLNEYRRKNDSVDLSLEAKSVLEQIVNVDNQLNDLTFRESEISQLYTKEHPNYKALMEKRKTLQEEKAKLNKRVSVMPETQQEILRLSRDVESGRAVYMQLLNRQQELNIAKSSAIGNVRIIDNAVAQTKPVKPKKIVIILIGFIFGSVVAIGIVLLRVFLRRGIESPEQLEELGINVYASIPVSEAFANNAVKKASWKNKNYDIKQAFLAVENPADLAIEAIRGLRTSLHFAMMESRNNILMISGASPNAGKTFVSTNLAAVIAQSGKKVLFIDTDMRKGYTHNLFNVENTKGLSDILSGKMTVERAIQPLSMAGFDFIARGAVPPNPAELLMHKNFDALLSWASQNYEIVVLDTPPILAVTDAAIIGNYVGTTLLVARFEQNTAKEIEVSVRRFEQSGVIVKGCILNGIIKKASSYYSYGYNHYGYTYTDNKK
>NZ_CP023487.1|WP_102097631.1|2228477_2229485_+|hypothetical-protein
MAKDNSISRIILDWRDTVAPVLIMYLMVRTNVINFDDGDRILHFIALMVVGNSIIAIIDYYNFNGIAESSWRYDFLIDLNLKTDSDYESRMVVYQIVRNGNLRSSGLFVSALQYSYIAGMFCFYFYLKLLNSLKWLNFSGLALSLISMIICLAGVYVSQVRTAFLIIIFNILFYHLCLSYKNNFSFKPKLTMSLAVICSVVMFYAIYYLGESADASSYGRLAQYAIMISDFNPLGAGLGAYKGLFDSFYVYIILTLGAPSIYFIYFFVKRYIYIFSRKNIEIDKKYIPFVGVCFTAFPVMMLAMSFQHVAGSIYYTLNFLTFFISMRYLTNVSVK
>NZ_CP023487.1|WP_077261140.1|2229520_2230588_+|glycoside-hydrolase-family-99-like-domain-containing-protein
MIRLFLSQPRVFFIFIFFLISQAKAGSLDVGVYYYPGWNKPGVEVWEPIKKYPEREPILGWYQDGDDNIIQKQLAWMEKYGVTYIAYDWYWDENTGVKNRTFAIDAYLRNSQATNVKFALLWANHTNTPKNSKEFDNIVNYWIDNYFKSSKYFTINRRPVVFVFSPQRLEMDGHKFNMDVPSLLKRARLLGNKKGLKDIYFVASTGYDENNNLIYKYPPNSYDAVSAYNYHIGISNGIPKKNSYSYQELIAGYKYTWNKILSDSDLPYIIPVSSGWDRRPWGGSIPPEHDMSYGNPKEFGNMLSEAKEEIKLHQDKALNNIIICCWNEYGEGSYIEPSKKYGFKFLDEIQKNKNF

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Crispr_ID: NZ_CP023487_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023487_3

2630918-2631013

Orphan

Consensus_repeat	Method
TTGTGCCAACAGAATGCCAACAGAGTGCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023487_3

>merge|NZ_CP023487|3|2630918-2631013|CRISPRCasFinder
TTGTGCCAACAGAATGCCAACAGAGTGCCAACGCAAACCCAGTAACCACGCTGCGTACCGGCGGGGTTGTGCCAACAGAATGCCAACAAAGTGCCA

>NZ_CP023487|3|2|2630918-2631013|CRISPRCasFinder
TTGTGCCAACAGAATGCCAACAGAGTGCCA	ACGCAAACCCAGTAACCACGCTGCGTACCGGCGGGG
TTGTGCCAACAGAATGCCAACAAAGTGCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023487.1\|WP_055316555.1\|2635555_2635786_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_014837641.1\|2635328_2635517_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_032453660.1\|2628986_2629676_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP023487.1\|WP_074184647.1\|2631427_2632843_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP023487.1\|WP_004201105.1\|2627529_2627814_-\|host-nuclease-inhibitor-GamL	unknown	unknown	unknown
NZ_CP023487.1\|WP_048281026.1\|2626126_2626609_-\|siphovirus-Gp157-family-protein	unknown	unknown	gnl\|CDD\|368503
NZ_CP023487.1\|WP_032419324.1\|2630384_2630531_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_055316552.1\|2635831_2636089_+\|DNA-polymerase-III-subunit-theta	unknown	unknown	gnl\|CDD\|368909
NZ_CP023487.1\|WP_071888999.1\|2628308_2628533_-\|cell-division-inhibitor-protein	unknown	unknown	gnl\|CDD\|236900
NZ_CP023487.1\|WP_055316544.1\|2626605_2627520_-\|recombinase-RecT	unknown	unknown	gnl\|CDD\|236628
NZ_CP023487.1\|WP_023304898.1\|2630077_2630299_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP023487.1\|WP_055316550.1\|2636290_2636758_+\|recombination-protein-NinB	unknown	unknown	gnl\|CDD\|368607
NZ_CP023487.1\|WP_048983288.1\|2633614_2633875_+\|DUF4752-family-protein	unknown	unknown	gnl\|CDD\|339554
NZ_CP023487.1\|WP_004151299.1\|2629803_2630037_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP023487.1\|WP_023283338.1\|2634499_2634712_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_004243010.1\|2636738_2636906_+\|NinE-family-protein	unknown	unknown	gnl\|CDD\|182029
NZ_CP023487.1\|WP_004219883.1\|2628525_2628651_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_045326713.1\|2627884_2628319_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371662
NZ_CP023487.1\|WP_012542626.1\|2632842_2633136_+\|protein-ren	unknown	unknown	gnl\|CDD\|238042
NZ_CP023487.1\|WP_055316560.1\|2633132_2633618_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023487.1\|WP_032453660.1\|2628986_2629676_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	1.97806e-27
NZ_CP023487.1\|WP_074184647.1\|2631427_2632843_+\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	1.28805e-155
NZ_CP023487.1\|WP_048281026.1\|2626126_2626609_-\|siphovirus-Gp157-family-protein	gnl\|CDD\|368503	pfam05565, Sipho_Gp157, Siphovirus Gp157. This family contains both viral and bacterial proteins which are related to the Gp157 protein of the Streptococcus thermophilus SFi bacteriophages. It is thought that bacteria possessing the gene coding for this protein have an increased resistance to the bacteriophage.	3.48851e-37
NZ_CP023487.1\|WP_055316552.1\|2635831_2636089_+\|DNA-polymerase-III-subunit-theta	gnl\|CDD\|368909	pfam06440, DNA_pol3_theta, DNA polymerase III, theta subunit. DNA polymerase III (EC 2.7.7.7) is comprised of three tightly associated subunits, alpha, epsilon and theta. This family contains the theta subunit. The structure of the theta subunit shows that the N-terminal two thirds is comprised of three helices while the C-terminal third is disordered. The function of the theta subunit is poorly understood, but the interaction of the theta subunit with the epsilon subunit is thought to enhance the 3' to 5' exonucleolytic proofreading activity of epsilon.	6.15872e-33
NZ_CP023487.1\|WP_071888999.1\|2628308_2628533_-\|cell-division-inhibitor-protein	gnl\|CDD\|236900	PRK11354, kil, FtsZ inhibitor protein; Reviewed.	1.47798e-15
NZ_CP023487.1\|WP_055316544.1\|2626605_2627520_-\|recombinase-RecT	gnl\|CDD\|236628	PRK09846, recT, recombination protein RecT.	1.90798e-25
NZ_CP023487.1\|WP_023304898.1\|2630077_2630299_+\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	7.34699e-10
NZ_CP023487.1\|WP_055316550.1\|2636290_2636758_+\|recombination-protein-NinB	gnl\|CDD\|368607	pfam05772, NinB, NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	2.75017e-48
NZ_CP023487.1\|WP_048983288.1\|2633614_2633875_+\|DUF4752-family-protein	gnl\|CDD\|339554	pfam15944, DUF4752, Domain of unknown function (DUF4752). This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 90 and 105 amino acids in length. There is a conserved GLA sequence motif.	3.71938e-41
NZ_CP023487.1\|WP_004151299.1\|2629803_2630037_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	9.32854e-22
NZ_CP023487.1\|WP_004243010.1\|2636738_2636906_+\|NinE-family-protein	gnl\|CDD\|182029	PRK09689, PRK09689, prophage protein NinE; Provisional.	3.07364e-21
NZ_CP023487.1\|WP_045326713.1\|2627884_2628319_-\|hypothetical-protein	gnl\|CDD\|371662	pfam11672, DUF3268, zinc-finger-containing domain. This is a family of bacterial and plasmid sequences that carry at least one zinc-finger towards the N-terminus and a possible second at the C-terminus.	1.20175e-41
NZ_CP023487.1\|WP_012542626.1\|2632842_2633136_+\|protein-ren	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	0.000892927

>NZ_CP023487.1|WP_032419324.1|2630384_2630531_+|hypothetical-protein
MPKSNRFYQAQTHKNVTRDRFIRSVNPVVGMKMRAILEELKRKESGRE
>NZ_CP023487.1|WP_023304898.1|2630077_2630299_+|hypothetical-protein
MESSTTRNKVEARRIESWLHSQIAELGTTNIAKVAGVNKSTVSRWRENLLPNMSLLLAILISNRPGEKGDFEA
>NZ_CP023487.1|WP_004151299.1|2629803_2630037_+|helix-turn-helix-domain-containing-protein
MKNPAVEKAISIAGSQKELAKRCGKAQSTICDWLNGKKRISPVHVPDLVAAVNGEIKAYEFRPDLPSIFPPPNNSAA
>NZ_CP023487.1|WP_032453660.1|2628986_2629676_-|helix-turn-helix-transcriptional-regulator
MDFSERLARAMSLAGYTQGRLAKEVGMAQSSVNKLLNGANGSRKTVEIASVLGVRPEWLSTGAGEMLADSIQITEVQTPVTPKNGIYRVDVLDVKASAGPGALITNDFIETIRAIEYTSEQARSLFGNRPAHHIKVITVTGDSMDTTISPGDEIFVDISVTHFDSDGVYVFVFGKTLHVKRLQMQRDRLAVISDNPIYEKWYVEPGDEDQFYVMARVLLRQSIEYKRFA
>NZ_CP023487.1|WP_004219883.1|2628525_2628651_-|hypothetical-protein
MLGWQMSKQGIRSLIYCLLICGVIWTALIIKILHVTGVFNG
>NZ_CP023487.1|WP_071888999.1|2628308_2628533_-|cell-division-inhibitor-protein
MVSHHYGTQTVNRGAVLPGMLVKHRESTWTASANKRGRLYLHRGIERTYTTDLLVEVYLNGLGHALRSGGKGGN
>NZ_CP023487.1|WP_045326713.1|2627884_2628319_-|hypothetical-protein
MEIKTPSNPSRKATARVKNPLPVPTICHLCDSRIKIATHEEVYGRNYSDWPYMYLCEGCGAYVGLHPFTAIPLGTLADKRTREARKLCKEPFERIWRTGVMSRSEAYEWLASKMGIPQQECHFGWFTAEQCNLAMAHCNDLFKR
>NZ_CP023487.1|WP_004201105.1|2627529_2627814_-|host-nuclease-inhibitor-GamL
MNAYRAYDAIEERKWAEQSLTEEKQKWIDDRAQEIIDSLPKEPSGLFRFSVPMDKSPYEGLRSDAAGEAYNDLISAVAYAQAEYDWDHRTGCPF
>NZ_CP023487.1|WP_055316544.1|2626605_2627520_-|recombinase-RecT
MSFDLIQFVKQQESLFNGALTDQSLTWAKECQFAIQLFQRNDKLAQTAISNPVSAQNAIINVAAVGISLNPASKLAYLVPRDGMVCLDISYMGLLHIAQSAGVIKWGQCKLVHACDAYETVGLDKAPAHKYNPFATPEERGAVIGGYCTVKTSDGDYLTEEMSLAEIEEIRKVSKAGTSPKGPWVNFWSEMARKTIVKRAYKYWPRADRLDNAVDMLNESEGIFTEPVMQYTPESEVIQSEENAEQELINSVHSLCEDMRQAANMHALKTHFQAAYKMTAGMRLQQEVQAVYAKCKAKFEEVTQ
>NZ_CP023487.1|WP_048281026.1|2626126_2626609_-|siphovirus-Gp157-family-protein
MTALYQIANDFAKLTDSGMEPEMIADTLDGIEWELEAKVEQILAICKNESAYAEALKEESKCLAERAKAAESKVASMKDYVAKSLETAGKKSLKAGIHQVTVRAPSKSVEITDASILPPQFVEYETNIKPDKLAIKHQIEAGVEVPGAQIKLGKPSLIIK
>NZ_CP023487.1|WP_074184647.1|2631427_2632843_+|AAA-family-ATPase
MTPPHSIEAEQSVLGGLLLDADNSERTQKVLSILKPESFYARQHQVIFAEMRQMYRDHKPVDLLTLFDALDSKGLTETVGGFAYLAEMSKNTPSAANIVAYAMRVRETAMERYGIEKTTKAIELLYARNGMTAEQKFDAIQGLFTEITEHVKTGRRTGLRTFYDAVTDWSAEFDERLKPDGRSRGLSTGIRSLDELLGVKRIVRGSLFVIGARPKMGKTTLYTQMGINCATVENEPALMFSLEMPEGQMVEKITAQKGRISPNLFYPDMTKDDYGYRGDWNGDLKKATGVMGALIDTNNLLIDDTPGISLAHVMAESRRIKRERGKVGMILVDYLTLMTADKAERNDLAYGLITKGLKTLAKELDCVVVLLTQLNRDLEKRTNKRPLPSDSRDTGQIEQDCDYWLAIYREGAYDENANQSDTELLLRLNRHGETGVVYCEQRHGAIYDCDQEAASQRRREKEEKPTKRGGF
>NZ_CP023487.1|WP_012542626.1|2632842_2633136_+|protein-ren
MTGKDAILNYLKTHKTCSSPDVAAASGMTHTCINQAANILAKQGVLVAEARVWRTVYYRLATEEEISGRKSTNQIFNECRQSPAMKRVLAVYGRTSA
>NZ_CP023487.1|WP_055316560.1|2633132_2633618_+|hypothetical-protein
MTITLEAVNELIASLESAGELSIREQKFLKLAKAYQQLAAENVALKAAFNKPDAWLSCHSIPPTYQEPDRGGEYLAVHQQPGEKNDDGSDSWPVYAKPEIETPATDRIVAGIKADGVEEFIGRLQQHVDEGDFVGDEVAVIVGAIDCGKEFFEQLREGADK
>NZ_CP023487.1|WP_048983288.1|2633614_2633875_+|DUF4752-family-protein
MSIATYLNTGLAILGWAYIMVKTGQWVTKNALRQWDKRRKESRRQKAVNEFYDAFELNSLEPGSTVRLATKGDLTIMMFRSEGDDK
>NZ_CP023487.1|WP_023283338.1|2634499_2634712_+|hypothetical-protein
MGITEGFCADLYCDCDGCQSGKIYPQGQADFIGRNMTDISQQARKAGWRISKDRQRCYAPGHKISRGANQ
>NZ_CP023487.1|WP_014837641.1|2635328_2635517_+|hypothetical-protein
MAYIFLIFVISSNTSNMQVVPMQSMEQCKAAIKAMKVADDKRSWDDVSPSVDNIQCVEVKGA
>NZ_CP023487.1|WP_055316555.1|2635555_2635786_+|hypothetical-protein
MENKPEWQQQAEKLAELYGASFVIFRNGKEPECVDPTKVVLSFDEESKRRFEESREAMRQEHAMASRLTKHRFNPK
>NZ_CP023487.1|WP_055316552.1|2635831_2636089_+|DNA-polymerase-III-subunit-theta
MSQWNIAAKSKDEQDKVNVDLAASGVAYKERLNMPVVAEVVAREQPEHLREYFLERVRYYREQSIQLPRASDPRYLEMAEQNAKK
>NZ_CP023487.1|WP_055316550.1|2636290_2636758_+|recombination-protein-NinB
MKQQFCLINDHVKHNVVRFIQSLPVDHRSPLIIEAREESRTDKQNRLMWPLLKDLSDQVIWHGEKLEPAEWKDLITVLVSQMQNPEREQKSAPGINGGRVYFGVRTSQSSKRYMVEVIEAIYWFGTEHNVKFSEKSSSRIAWAQEWRASHAQPAR
>NZ_CP023487.1|WP_004243010.1|2636738_2636906_+|NinE-family-protein
MHSLLAKVMERGIFRVPARRKRKVEVKPSDIPTFHYTAHLADVRWLRRAARRKIA

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Crispr_ID: NZ_CP023487_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023487_4

2730829-2730930

Orphan

Consensus_repeat	Method
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023487_4

>merge|NZ_CP023487|4|2730829-2730930|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGACAGCAGAACAGGTGGCTGAGAGAGTGCAGGAATGTGTAGCCTCGCTAAGCGAAGCGCGAGCGAGGAGA

>NZ_CP023487|4|3|2730829-2730930|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	CAGCAGAACAGGTGGCTGAGAGAGTGCAGGAATG
TGTAGCCTCGCTAAGCGAAGCGCGAGCGAGGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023487.1\|WP_014907381.1\|2722391_2722505_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_002910198.1\|2718126_2718777_-\|two-component-system-response-regulator-NarL	unknown	unknown	gnl\|CDD\|182619
NZ_CP023487.1\|WP_004145401.1\|2737367_2737499_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_002910105.1\|2735513_2736416_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|184021
NZ_CP023487.1\|WP_002910193.1\|2726411_2727947_+\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063
NZ_CP023487.1\|WP_032103886.1\|2741024_2741210_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_002910103.1\|2736537_2736945_-\|DNA-binding-transcriptional-regulator-H-NS	unknown	unknown	gnl\|CDD\|182858
NZ_CP023487.1\|WP_002910108.1\|2733310_2734213_+\|patatin-like-phospholipase-RssA	unknown	unknown	gnl\|CDD\|182352
NZ_CP023487.1\|WP_032418823.1\|2722671_2726415_+\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
NZ_CP023487.1\|WP_002910191.1\|2727943_2728654_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|185014
NZ_CP023487.1\|WP_004189450.1\|2729327_2730224_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP023487.1\|WP_002910107.1\|2734302_2735316_+\|two-component-system-response-regulator-RssB	unknown	unknown	gnl\|CDD\|182652
NZ_CP023487.1\|WP_004175566.1\|2718787_2720566_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	unknown	unknown	gnl\|CDD\|182581
NZ_CP023487.1\|WP_004152249.1\|2730331_2730775_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP023487.1\|WP_002910097.1\|2738271_2740947_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_CP023487.1\|WP_004175568.1\|2720877_2722266_+\|NarK-family-nitrate/nitrite-MFS-transporter	unknown	unknown	gnl\|CDD\|184994
NZ_CP023487.1\|WP_002910189.1\|2728653_2729331_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
NZ_CP023487.1\|WP_055316409.1\|2737506_2738124_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NZ_CP023487.1\|WP_004151854.1\|2731854_2732697_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
NZ_CP023487.1\|WP_002910109.1\|2732739_2733198_-\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|234966

Protein	Function_ID	Function_description	E-value
NZ_CP023487.1\|WP_055316409.1\|2737506_2738124_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	4.2837e-115
NZ_CP023487.1\|WP_002910198.1\|2718126_2718777_-\|two-component-system-response-regulator-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.26442e-140
NZ_CP023487.1\|WP_002910105.1\|2735513_2736416_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
NZ_CP023487.1\|WP_002910109.1\|2732739_2733198_-\|YchJ-family-protein	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	7.51559e-107
NZ_CP023487.1\|WP_002910103.1\|2736537_2736945_-\|DNA-binding-transcriptional-regulator-H-NS	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	2.61324e-79
NZ_CP023487.1\|WP_002910108.1\|2733310_2734213_+\|patatin-like-phospholipase-RssA	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
NZ_CP023487.1\|WP_032418823.1\|2722671_2726415_+\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
NZ_CP023487.1\|WP_002910191.1\|2727943_2728654_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	1.14838e-83
NZ_CP023487.1\|WP_004189450.1\|2729327_2730224_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	3.2204e-15
NZ_CP023487.1\|WP_002910107.1\|2734302_2735316_+\|two-component-system-response-regulator-RssB	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
NZ_CP023487.1\|WP_004175566.1\|2718787_2720566_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
NZ_CP023487.1\|WP_004152249.1\|2730331_2730775_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.05574e-32
NZ_CP023487.1\|WP_002910097.1\|2738271_2740947_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_CP023487.1\|WP_004175568.1\|2720877_2722266_+\|NarK-family-nitrate/nitrite-MFS-transporter	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
NZ_CP023487.1\|WP_002910189.1\|2728653_2729331_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	2.8765e-130
NZ_CP023487.1\|WP_004151854.1\|2731854_2732697_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	4.09997e-176
NZ_CP023487.1\|WP_002910193.1\|2726411_2727947_+\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0

>NZ_CP023487.1|WP_004152249.1|2730331_2730775_+|Lrp/AsnC-family-transcriptional-regulator
MNDVLDEIDRAILTCLTQDARVSLKVLSARVGLTSPSTAERVKRLEERGVIQGYGARVNLAALGYSLQALVRVRPLPGLLQKVDKYIQAMPECIESDKVTGEDCFVMRLVVRDIAQLDTLLDGLAEYAQCNTSVVKSSPVKRRLPPL
>NZ_CP023487.1|WP_004189450.1|2729327_2730224_-|DMT-family-transporter
MQLTRGVWQMSLAMIISGSIGAFVLLSGLPVTDVVFWRCLIGALTLLVFIVLSRQPFSRLTRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGERVSAVKWGWLLLAFGGVVILLSSELMPAHEEGLTTGVLLALGAAFFYALTAIIARKLHPLPAQHIAFIQVLVGVVMLLPLVHAPELTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPTPVTGSLSFIYPLVAMVVDYLVFHHALSAVQLLGGMLILFAAAGNNLGWGEKKPRRGGVSEQSRAS
>NZ_CP023487.1|WP_002910189.1|2728653_2729331_+|respiratory-nitrate-reductase-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPIDVKQKMAMIAGGACGVMTLVGGLLLLKRRLLSPRVRATTTGADILILSLLMVQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGVAFIFRVHLVLGMTLFLLFPFSRLVHIWSAPVEYLTRKYQIVRARR
>NZ_CP023487.1|WP_002910191.1|2727943_2728654_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MIELVIVSRLLEYPDAALWQHQQEMFEALASSEKLSKEDAHALGVFLRDLVAQDPLDAQAAYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYERHGLLLDSHELPDHLPLYLEYLAQLPEEEALGGLRDVAPILGLLSARLQQRESRYAVLFELLLKLANTQVDSQKVAEKIADEARDDTPQALDAVWEEEQVKFFADQGCGESEISAHQRRFAGAVAPQYLNISNGGQQ
>NZ_CP023487.1|WP_002910193.1|2726411_2727947_+|nitrate-reductase-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDYDYQNLHNAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFDNMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIESGMPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFLDPNDPKVIEQALKDGVPQGVIEAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGVVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHREQAREAFPEKNGCGFSFGDGCHGSDSQFNLFNSRRIDAIDVTSKTEPHA
>NZ_CP023487.1|WP_032418823.1|2722671_2726415_+|nitrate-reductase-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKVQHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAITPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDKPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRTLRASDLVDSLGQENNPEWKTVAFDEKGDMTVPNGSLGFRWGDKGKWNLEQRDGKTGEEIELRLSLLGSHDEVANVGFPYFGGEGSEHFNKVDLENILLHKLPAKRLQLADGSTALVTTVYDLTMANYGLERGLNDDNCAAGYDEVKAYTPAWAEKITGVSRAHIIRTAREFADNADKTHGRSMIIVGAGLNHWFHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGVNPLRIADEAKKAGMTPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTENGIQGKDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIAKKFSEVCMGHLGKETDVVTLPIQHDSAAEMAQPLDVKDWKKGECDLIPGKTAPHIIPVERDYPATYERFTSIGPLLETIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPKLETAIDAAEMILTLAPETNGQVAVKAWQALSEITGREHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLTGRQSLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGEKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSEADAKDLGIEDNDWIEVFNANGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYGHLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>NZ_CP023487.1|WP_014907381.1|2722391_2722505_+|hypothetical-protein
MGLPVKWLYPLIPPLLTNPGEAPLFEVKIIKKQQVKK
>NZ_CP023487.1|WP_004175568.1|2720877_2722266_+|NarK-family-nitrate/nitrite-MFS-transporter
MSQSSLPEKANRSVITDWRPEDPEFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLNKVGFQFTTDQLFMLTALPALSGALLRVPYAFMVPLFGGRRWTAFSTGIMIVPCVWLGFAVQDTSTPFSIFVIISLLCGFAGANFASSMANISFFFPKAKQGGALGVNGGLGNMGVSVMQLVAPLVVSISIFAVFGGNGSEQPDGSMLYLENAAWIWVPFLIIFTLAAWFFMNDLSASKASLSEQLPVLKRLHLWIMALLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSMGGAISDRLGGTRVTLVNFVVMAVFCALLFLTLPTNGQGGNFIAFFAVFMVLFLTAGLGSASTFQMISVIFRKLTMDRVKAQGGSEAQAMREAATDTAAALGFISAIGAIGGFFIPKAFGISLDLTGSPAGAMKVFLVFYIACVVITWAVYGRKRQ
>NZ_CP023487.1|WP_004175566.1|2718787_2720566_-|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX
MLKRLFTPLTLVNQLALIVLLATIIGVAGMAISARLVNGVQGSAHAINKAGSLRMQSYRLLAAIPLNENDQKLVADMTATVFSPELQNSARRDGQEIQLKALQQYWQLALAPGMQRAVNQAEVAQDVADFVDRIDQLVTAFDHTTEQRIERVVWIHRILAIGMALLLIFTIIWLRARLLRPWKQLLSMARAVSQRDFTQRAHISGRNEMATLGMALNNMSEELAESYAVLERRVQEKTAGLEQKNEILAFLWQANRRLHSSAPLCERISPVLNGLQGLTLLRDIEVRVYDLEDEDNHQEFTCHSDDDCDDKGCYLCPRNLPPLPDGGTTLKWRLSDAHSQYGILLATLPVGRHLSHDQQQLVDTLVEQLTSTLALDRHQEKQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPTESRQLLGQIRNELNTSWAQLRELLTTFRLQLTEPGLRPALEASCQEYSAHFGFTVQLDYQLPPRFVPSHQAIHLLQIAREALSNALKHASATEVTVTVSQRDNQVRLVVADNGRGVPDHAERSNHYGLIIMRDRAQSLRGDCQVRRRETGGTEVIVTFIPEKTFSIQ
>NZ_CP023487.1|WP_002910198.1|2718126_2718777_-|two-component-system-response-regulator-NarL
MSQQERATILLIDDHPMLRTGVKQLISMAPDIQVIGEASNGAQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRVVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATSDRDISQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>NZ_CP023487.1|WP_004151854.1|2731854_2732697_-|formyltetrahydrofolate-deformylase
MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDATLLADLDSALPEGSIRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVDIAAVIGNHDTLRSLVERFGIPFELVSHEGLSREEHDQRMGDAIAAHEPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>NZ_CP023487.1|WP_002910109.1|2732739_2733198_-|YchJ-family-protein
MSQLCPCGSALEYSSCCQRYLSGAELAPGPSQLMRSRYSAFVMKDADYLIKTWHPSCQAQQFRAELEKGFSQTEWLGLTLFASDEGRAPNEGFVSFVARFNDNNRPGAIIERSRFLKENGQWYYIDGTRPLIGRNDPCPCGSGKKFKKCCGQ
>NZ_CP023487.1|WP_002910108.1|2733310_2734213_+|patatin-like-phospholipase-RssA
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALESWVCSFSNWDVLKLMDLSWRRGGLLRGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGRELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQVLENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV
>NZ_CP023487.1|WP_002910107.1|2734302_2735316_+|two-component-system-response-regulator-RssB
MTQPLAGKQILIVEDEPVFRSLLHGWLTSLGATTFQAEDGKDALHKMTEVHPDLMICDISMPRMNGLELVETLRNRGEQLPILMISATENMADIAKALRLGVQDVLLKPVKDFDRLRETVYACLYPAMFSSRVEEEERLFEDWDALVSNPIAASRLLQELQPPVQQEMSHCRIHYRQLVSADKPGLVLDIAPLSENDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQGQRLPEMGSLLKQVNQLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNGTLNTGEHQIQISNGVPLGTLGDAYLNQISQRCTSWQCQIWGAGGRLRLMLSAE
>NZ_CP023487.1|WP_002910105.1|2735513_2736416_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MAALNSKVRKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSRDNLAEMISRFDETGASQIMVEPVEDVTAYGVVDCKGESLKPGESVPMVGVVEKPKADVAPSNLAVVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHKTLGDDFKAWLETAVAK
>NZ_CP023487.1|WP_002910103.1|2736537_2736945_-|DNA-binding-transcriptional-regulator-H-NS
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEIEERTRKLQQYREMLIADGIDPNELLSTMAAVKAGTKTKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLI
>NZ_CP023487.1|WP_004145401.1|2737367_2737499_-|hypothetical-protein
MTPIKVFYRGDDCTIFYAHSRAFSRGIVAKLKGLQTERIKKMN
>NZ_CP023487.1|WP_055316409.1|2737506_2738124_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPARLYNPQTSLFDDIAAEHQLKPIHCVLVDESQFLTREQVHELSEVVDTLDIPVLCYGLRTDFRGELFTGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQEGRPYNEGEQVVIGGNERYVSVCCKHYKEALSVGSLTKVQNQHRPC
>NZ_CP023487.1|WP_002910097.1|2738271_2740947_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAVTNIAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYLLQGKELKAVQDIILKNGALNAAIVGQPAAKIAELAGFTVPATTKILIGEVTNVDESEPFAHEKLSPTLAMYRAKDFEDAVAKAEKLVAMGGIGHTSCLYTDQDNQPARVAYFGQMMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLTIVRKGADLANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMVAITTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLAHVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGREFVEGEAGAKAEVAPVKAEKKAKKSA
>NZ_CP023487.1|WP_032103886.1|2741024_2741210_+|hypothetical-protein
MHVNVYVEKSGRCFTDLLKKLYLFRFQVLLPSTLLVSSRLLTSEYKLRDLDQVLSLLIPFS

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Crispr_ID: NZ_CP023487_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023487_5

4668376-4668471

Orphan

Consensus_repeat	Method
TGGCACTTTGTTGGCATTCTGTTGGCACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023487_5

>merge|NZ_CP023487|5|4668376-4668471|CRISPRCasFinder
TGGCACTTTGTTGGCATTCTGTTGGCACAACCTCGCCGGTACGCAGCGTGGTTACTGGGTTTGCGTTGGCACTTTGTTGGCATTCTGTTGGCACAA

>NZ_CP023487|5|4|4668376-4668471|CRISPRCasFinder
TGGCACTTTGTTGGCATTCTGTTGGCACAA	CCTCGCCGGTACGCAGCGTGGTTACTGGGTTTGCGT
TGGCACTTTGTTGGCATTCTGTTGGCACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023487.1\|WP_055314349.1\|4661760_4662357_-\|DUF1367-family-protein	unknown	unknown	gnl\|CDD\|369209
NZ_CP023487.1\|WP_009308001.1\|4665159_4665744_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379158
NZ_CP023487.1\|WP_055314351.1\|4666252_4666546_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238042
NZ_CP023487.1\|WP_099184339.1\|4663187_4664258_-\|DUF551-domain-containing-protein	unknown	unknown	gnl\|CDD\|367946
NZ_CP023487.1\|WP_024622729.1\|4671949_4672153_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_074437728.1\|4666545_4667961_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP023487.1\|WP_055314350.1\|4664450_4665170_-\|ead/Ea22-like-family-protein	unknown	unknown	gnl\|CDD\|379401
NZ_CP023487.1\|WP_004139615.1\|4669089_4669311_-\|bacteriophage-CII-family-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP023487.1\|WP_004178811.1\|4669350_4669584_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP023487.1\|WP_055314356.1\|4672862_4673831_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP023487.1\|WP_004151298.1\|4668857_4669004_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_074183191.1\|4672462_4672588_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_164486760.1\|4663017_4663188_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_048328157.1\|4664262_4664451_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_048273548.1\|4662521_4662749_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176519
NZ_CP023487.1\|WP_024622727.1\|4669688_4670378_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP023487.1\|WP_032717012.1\|4672580_4672775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023487.1\|WP_055314354.1\|4670636_4671476_+\|protein-rexA	unknown	unknown	gnl\|CDD\|374261
NZ_CP023487.1\|WP_055314355.1\|4671491_4671920_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|292590
NZ_CP023487.1\|WP_064760000.1\|4665740_4666256_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023487.1\|WP_055314349.1\|4661760_4662357_-\|DUF1367-family-protein	gnl\|CDD\|369209	pfam07105, DUF1367, Protein of unknown function (DUF1367). This family consists of several highly conserved, hypothetical phage proteins of around 200 residues in length. The function of this family is unknown. Some proteins are annotated as IrsA (intracellular response to stress).	9.86933e-79
NZ_CP023487.1\|WP_009308001.1\|4665159_4665744_-\|HNH-endonuclease	gnl\|CDD\|379158	pfam13392, HNH_3, HNH endonuclease. This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases.	2.43742e-15
NZ_CP023487.1\|WP_055314351.1\|4666252_4666546_-\|hypothetical-protein	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	0.00163514
NZ_CP023487.1\|WP_099184339.1\|4663187_4664258_-\|DUF551-domain-containing-protein	gnl\|CDD\|367946	pfam04448, DUF551, Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	7.47181e-09
NZ_CP023487.1\|WP_074437728.1\|4666545_4667961_-\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	1.77685e-156
NZ_CP023487.1\|WP_055314350.1\|4664450_4665170_-\|ead/Ea22-like-family-protein	gnl\|CDD\|379401	pfam13935, Ead_Ea22, Ead/Ea22-like protein. This family contains phage proteins and bacterial proteins that are likely to represent integrated phage proteins. This family includes the Lambda phage Ea22 early protein as well as the Bacteriophage P22 Ead protein.	0.00157969
NZ_CP023487.1\|WP_004139615.1\|4669089_4669311_-\|bacteriophage-CII-family-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	2.45228e-09
NZ_CP023487.1\|WP_055314356.1\|4672862_4673831_+\|hypothetical-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	1.23862e-06
NZ_CP023487.1\|WP_004178811.1\|4669350_4669584_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	1.28068e-24
NZ_CP023487.1\|WP_055314354.1\|4670636_4671476_+\|protein-rexA	gnl\|CDD\|374261	pfam15969, RexA, Intracellular sensor of Lambda phage, Abi component. RexA is a family of bacterial anti-phage proteins. It forms one partner in the two-component abortive infection system, Abi, of E. coli in partnership with RexB, a membrane-anchored ion- channel. Two RexA are needed to activate one RexB, and activation causes opening of the channel, the efflux of cations, a drop in cellular levels of ATP and subsequent death of the host cell and abortion of the phage infecting process which requires ATP.	4.94972e-86
NZ_CP023487.1\|WP_048273548.1\|4662521_4662749_-\|hypothetical-protein	gnl\|CDD\|176519	cd08577, PI-PLCc_GDPD_SF_unchar3, Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.	0.00432847
NZ_CP023487.1\|WP_024622727.1\|4669688_4670378_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	5.57279e-29
NZ_CP023487.1\|WP_055314355.1\|4671491_4671920_+\|hypothetical-protein	gnl\|CDD\|292590	pfam15968, RexB, Membrane-anchored ion channel, Abi component. RexB is a family of anti-lambda phage inner-membrane ion-channels with four transmembrane domains. On infection by phage, a phage protein-DNA complex is produced as a replication or recombination intermediate which activates RexA. RexA is an intracellular sensor that activates the membrane-anchored RexB. At least two RexA proteins are needed to activate one RexB protein. Activation opens the ion-channel leading to a drop in membrane potential, the outcome of which is the death of the host cell but also the cessation or abortion of the phage infection. RexA-RexB is one of the most well characterized bacterial abortive infection systems, or Abis.	2.31621e-61

>NZ_CP023487.1|WP_074437728.1|4666545_4667961_-|AAA-family-ATPase
MTPPHSIEAEQSVLGGLLLDDDNSERTQKVLSILKPESFYARQHQVIFAEMRQMYRDHKPVDLLTLFDALDSKGLTETVGGFAYLAEMSKNTPSAANIVAYAMRVRETAMERYGIEKTTKAIELLYARNGMTAEQKFDAIQGLFTEITDHVKTGRRTGLRTFYDAVTDWSAEFDERLKPDGRSRGLSTGIRSLDELLGVKRIVRGSLFVIGARPKMGKTTLYTQMGVNCATVENEPALMFSLEMPEGQMVEKITAQKGRISPNLFYPDMTKDDYGYRGDWNGDLKKATGVMGALIDTNNLLIDDTPGISLAHVMAESRRIKRERGKVGMILVDYLTLMTADKAERNDLAYGLITKGLKTLAKELDCVVVLLTQLNRELEKRTNKRPLPSDSRDTGQIEQDCDYWLAIYREGAYDENANQSDTELLLRLNRHGETGVVYCEQRHGAIYDCDQEAASQRRREKEEKPTKRGGF
>NZ_CP023487.1|WP_055314351.1|4666252_4666546_-|hypothetical-protein
MTGKDAILNYLKTHKTCSSPDVATASGMTHTCINQAANILAKQGVLVAEARVWRTVYYRLATEEEISGRKSTNQIFNECRQSPAMKRVLAVYGRTSA
>NZ_CP023487.1|WP_064760000.1|4665740_4666256_-|hypothetical-protein
MTITLQAVNELIASLESAGELSIREQKFLKLAKAYQQLAAENVTMRETIEAVRGVADNSSGIAGWHLNGEIAQWSEILPEIDDIETPATDCIVAGIKADGVEEFLKGSQLPYQIATVLADYDNADDETLLHVIWSGQPPEPEGDVWHLEYVSRGNAIVREVLKQLRDGADK
>NZ_CP023487.1|WP_009308001.1|4665159_4665744_-|HNH-endonuclease
MSKVNHSIAAKPINKEMIETYLHFDGLDFYWKERPLHMFKSEASCISWNKRFAGKKASHTSCKGYQEIRLLGSVYKAHRFVWCMHNGDIPKEMSIDHINHDRSDNRIENLRLVTQAENKRNATVRKDNSSHAVGVHFRRDIRKWTAYIFDGEKKKHLGTFLERKDAESARLNAEKQLGFHPNHGKAKCEAHYDN
>NZ_CP023487.1|WP_055314350.1|4664450_4665170_-|ead/Ea22-like-family-protein
MTTDITELAQSLKAAANTTADAIDRLKAFPGDELIDLSQHEGEQVDIDIATLNQWYELSSPDNILALVEALEKANRYIERLREWNAGLAQESCERQQLISELEPIRAAAEKLVRCKGRYHSEQNYRALAALFGVKTPDLPPLVHENVHYADAAEMEIEALRQRIAELEESNAQVIQSRDHYKRMTEEGLKQLAEARTVKLPDLRQIVSGDRYVWSDGVYNYSQDVKVALAAAGIKVEAE
>NZ_CP023487.1|WP_048328157.1|4664262_4664451_-|hypothetical-protein
MKMGEHMEPVIELLEELNGNNTDAKLKLLALVISEYMLNADVTGFEVTAGKMKVSVDISVEE
>NZ_CP023487.1|WP_099184339.1|4663187_4664258_-|DUF551-domain-containing-protein
MTKSTITRERMEEIRDCCWMDDLGLSMDELSELARMALAAMDSSESVELPLDYLQGHKDGLEWASQLAEANHPDTGDWLYDDPIELAKAIRKGPDMPPVQPVADSEPDRNPVLAYADSYRDMAKQGVESVPIWSVITDLERNIAPLYRHAQQPVVPAELHPDTQKLVIDFCTVLAEKLYKAQLKYGYDADWKQDGWPTQCQAHFHQHIAKGDPRDVAAYCAFMWYHGWKTEATQPVTEVPKPISDRQAIVALESAGAVTPIGRAYKMDWNVCRAAMLAAAPQSPGSEPSTVPGKWIPVSERIPEDRKQVILWDAEIGEVTSGHYSHKTQTFYHCGDAIENEITHWMPLPAAPQEVK
>NZ_CP023487.1|WP_164486760.1|4663017_4663188_-|hypothetical-protein
MEWYFSIGLVLWILAQITRVDETTGIKNNILCLLLFIVLWPKIVATLAYKLIVREE
>NZ_CP023487.1|WP_048273548.1|4662521_4662749_-|hypothetical-protein
MGRSSFDARLDKRVNIERLEEQGLIADSMDVRKNLVERVLRGEITPEQSREELRRIQRNAKRNGLKTRNQAWREG
>NZ_CP023487.1|WP_055314349.1|4661760_4662357_-|DUF1367-family-protein
MAQTLQFEKSYQNVLIPAEPGTSEYLQLIPVGQLLCGEFRKPRNYAFHKKFFKLLTLGYHYWTPSGGLIEPAERTLISGFIDFLSSDFDQRAALQNASEMYLSSVGISRSRDMALLKHFESFREWATIQAGFYDEYQMPDGSRRRVAKSISFASMDDSQFNGVYKSVLNVLWNYILRRKFHSPTEAENAASQLLSFAG
>NZ_CP023487.1|WP_004151298.1|4668857_4669004_-|hypothetical-protein
MPKSNRFYQAQTHKNVTRDRFIRSVNPVVGMKMRAILEELKRKEEGRE
>NZ_CP023487.1|WP_004139615.1|4669089_4669311_-|bacteriophage-CII-family-protein
MESSTTRNKVEARRIESWLHSQIAELGTTTIAKVAGVNKSTVSRWRESLLPNMSLLLAILISNRPGEKGDFEA
>NZ_CP023487.1|WP_004178811.1|4669350_4669584_-|helix-turn-helix-domain-containing-protein
MNPTIKTAINIVGSQKKLGEACDVSQQAVYKWLHNKAKVSPEHVNSIVNATNGEVQAHQIRPDLPKLFPSPKGVPAA
>NZ_CP023487.1|WP_024622727.1|4669688_4670378_+|helix-turn-helix-transcriptional-regulator
MKTTLAERLREARKAASMTQKTLGDAVGVSQAAIQKIETGRAAQTTKLLDIAKALRVRPEWLSSGTGAMRADGEDDKKPSHINHDVFRVDILDLAVSAGPGIVNQEFVEILHSVEYAPAEARHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDISVKSFDGDGIYAFLYDDTAHVKRLQKMKDKLLVISDNKSYAAWDPIEKDEMNRVFVFGKVIGSMPQTYRKHG
>NZ_CP023487.1|WP_055314354.1|4670636_4671476_+|protein-rexA
MKTGFYAAYRSKDKGKRKTSLGLLGFIKSLINGKNSLNIGNNYLYIHEIDDKTFLFTKTNDKSLVQKINKSNASVEDIKSSLAEDESLGFPSFIFIDGDIIGFARTIYGPTTSDLTDFLIGKGMPADEGSRLQVEPLMRGTTKDDVMSMHFIGRTTVKVEAKSSAFGDILKTLGAKDIEGELFDSIEIVIKPKFKRNIKQLAKDIVSNPNPQFSDISLRARDEAGDILADHYLSEKGHLSASLDKVTNAEIAEEIAYCFIRMKTAILESFDRQVGKLKE
>NZ_CP023487.1|WP_055314355.1|4671491_4671920_+|hypothetical-protein
MRNKIMPGIYIVAIPYALVIACYISFRHFFPGVSFSAHRDGLGAALASYAGTMIAILIAAMTFLIGSRTRRLDKIREYGYMTSVVIVYALSFVELGILFFSGVFLISSMNGYMLPTIAIAVAAASFIHICVLVFQLYNLTHD
>NZ_CP023487.1|WP_024622729.1|4671949_4672153_-|hypothetical-protein
MSNEDEFFAEMHPQIAQVIGIAVMQLLVEKREPSREALIEMIQVLWQGNRVELAVELALDVLILREE
>NZ_CP023487.1|WP_074183191.1|4672462_4672588_+|hypothetical-protein
MLGCGMSRNGIRSLIYCLLICGVIWTALIIKILHATGVFNG
>NZ_CP023487.1|WP_032717012.1|4672580_4672775_+|hypothetical-protein
MANSIPNSGRAVMMRNRRTGAAWLVSFDYRDGSYWHEPQGNLRHIRRPYASRSIEPNLVPAGTH
>NZ_CP023487.1|WP_055314356.1|4672862_4673831_+|hypothetical-protein
MSEIMDLVVIEKKNAMAVFTNNDQLDPLIEAIEKEARSLVPDVTTKKGRDAIASMAHKVARSKTYIDNAGKDLVAELKALPKQIDESRRVVRERLDALKDEVRRPLTEWEAEQERIKAEEAMNALHAEALVMNEEFDRQLAARIESDHEMALLMNDAFDREQAEKKAEAERQRVAREEEIKRLAEEKAKREAAEQAQREIDAAAAREREAILAKERAEREQREAAERAEREKQAAVEAERRKAQEEADRIRREAEQREQARLAEEKRKAEEESRRAADVEHRRGINTAAVQALINQGIPHEWAKACIIAVALGKVPATTIKY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP023487_2	2.1\|2217008\|40\|NZ_CP023487\|PILER-CR	2217008-2217047	40	NZ_CP023487.1	2217311-2217350	1	0.975
NZ_CP023487_2	2.2\|2217109\|40\|NZ_CP023487\|PILER-CR	2217109-2217148	40	NZ_CP023487.1	2217311-2217350	1	0.975

1. spacer 2.1|2217008|40|NZ_CP023487|PILER-CR matches to position: 2217311-2217350, mismatch: 1, identity: 0.975

taccccgattagttcgccatcccgtaggcctgataagcga	CRISPR spacer
taccccgattagttcgccattccgtaggcctgataagcga	Protospacer
********************.*******************

2. spacer 2.2|2217109|40|NZ_CP023487|PILER-CR matches to position: 2217311-2217350, mismatch: 1, identity: 0.975

taccccgattagttcgccatcccgtaggcctgataagcga	CRISPR spacer
taccccgattagttcgccattccgtaggcctgataagcga	Protospacer
********************.*******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023487_5	5.1\|4668406\|36\|NZ_CP023487\|CRISPRCasFinder	4668406-4668441	36	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8447-8482	0	1.0
NZ_CP023487_5	5.1\|4668406\|36\|NZ_CP023487\|CRISPRCasFinder	4668406-4668441	36	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8447-8482	0	1.0
NZ_CP023487_5	5.1\|4668406\|36\|NZ_CP023487\|CRISPRCasFinder	4668406-4668441	36	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11383-11418	0	1.0
NZ_CP023487_3	3.1\|2630948\|36\|NZ_CP023487\|CRISPRCasFinder	2630948-2630983	36	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8447-8482	1	0.972
NZ_CP023487_3	3.1\|2630948\|36\|NZ_CP023487\|CRISPRCasFinder	2630948-2630983	36	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8447-8482	1	0.972
NZ_CP023487_3	3.1\|2630948\|36\|NZ_CP023487\|CRISPRCasFinder	2630948-2630983	36	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11383-11418	1	0.972
NZ_CP023487_3	3.1\|2630948\|36\|NZ_CP023487\|CRISPRCasFinder	2630948-2630983	36	NZ_CP026278	Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence	8602-8637	4	0.889

1. spacer 5.1|4668406|36|NZ_CP023487|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

2. spacer 5.1|4668406|36|NZ_CP023487|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

3. spacer 5.1|4668406|36|NZ_CP023487|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

4. spacer 3.1|2630948|36|NZ_CP023487|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 1, identity: 0.972

acgcaaacccagtaaccacgctgcgtaccggcgggg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
*********************************.**

5. spacer 3.1|2630948|36|NZ_CP023487|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 1, identity: 0.972

acgcaaacccagtaaccacgctgcgtaccggcgggg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
*********************************.**

6. spacer 3.1|2630948|36|NZ_CP023487|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 1, identity: 0.972

acgcaaacccagtaaccacgctgcgtaccggcgggg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
*********************************.**

7. spacer 3.1|2630948|36|NZ_CP023487|CRISPRCasFinder matches to NZ_CP026278 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence) position: , mismatch: 4, identity: 0.889

acgcaaacccagtaaccacgctgcgtaccggcgggg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtacaagtgagg	Protospacer
**************************** .*.*.**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1800116 : 1817728

Salmonella_phage(30.43%)

integrase

attL 1792519:1792534|attR 1823548:1823563

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1792519:1792534	attL	NA	NA	NA	NA
WP_032418525.1\|1800116_1801583_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.5e-87	38.7
WP_004151979.1\|1801650_1803228_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_032418526.1\|1803419_1804673_+\|integrase	site-specific integrase	A0A1X9TCT6	Enterobacter_phage	3.5e-202	83.6
WP_032418527.1\|1804934_1805597_-	metallophosphoesterase	K7P6H8	Enterobacteria_phage	4.7e-97	75.5
WP_032418529.1\|1805593_1806196_-	adenine methylase	A0A193GYV6	Enterobacter_phage	4.0e-103	92.4
WP_023285452.1\|1806192_1806699_-	hypothetical protein	NA	NA	NA	NA
WP_009485474.1\|1806695_1806854_-	DUF1317 family protein	T1SAR0	Salmonella_phage	8.7e-18	80.8
WP_009485475.1\|1806846_1807140_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
WP_004144294.1\|1807249_1807498_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	2.8e-31	78.0
WP_032418530.1\|1807548_1808571_-	recombination protein RecT	Q858E1	Salmonella_phage	4.0e-180	95.3
WP_004144292.1\|1808580_1809480_-	YqaJ viral recombinase family protein	Q858E0	Salmonella_phage	6.5e-158	91.0
WP_004164029.1\|1809476_1809776_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_004164037.1\|1809772_1809922_-	hypothetical protein	G9L6A5	Escherichia_phage	7.9e-13	84.2
WP_004144290.1\|1810142_1810724_-	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
WP_004152538.1\|1810878_1811112_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004152537.1\|1811258_1811468_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_004207253.1\|1811467_1812235_+	hypothetical protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
WP_032418532.1\|1812231_1813017_+	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
WP_032418534.1\|1813136_1813484_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	1.9e-49	81.7
WP_032419436.1\|1813676_1814078_+	hypothetical protein	A0A2H4N7F5	Pectobacterium_phage	8.7e-22	51.6
WP_025860565.1\|1814149_1814359_+	hypothetical protein	NA	NA	NA	NA
WP_032418536.1\|1814355_1814610_+	hypothetical protein	NA	NA	NA	NA
WP_032419437.1\|1814609_1814873_+	hypothetical protein	A0A2P0P958	Salmonella_phage	3.5e-27	65.5
WP_191974511.1\|1814884_1815574_+	hypothetical protein	K7PH64	Enterobacterial_phage	1.0e-06	69.2
WP_032418538.1\|1815566_1815806_+	hypothetical protein	G8C7S3	Escherichia_phage	8.6e-09	51.7
WP_032418539.1\|1815805_1816144_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	3.1e-44	79.1
WP_004178082.1\|1816240_1817728_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
1823548:1823563	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2189574 : 2196479

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004180551.1\|2189574_2190438_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_004180550.1\|2190448_2191222_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004151134.1\|2191462_2192359_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004144192.1\|2192601_2193963_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_032418655.1\|2194281_2195004_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	1.4e-30	33.2
WP_004149058.1\|2195000_2196479_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

2237713 : 2246092

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032418677.1\|2237713_2239120_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	1.8e-37	28.7
WP_032418679.1\|2239342_2240407_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.4e-105	55.0
WP_004175258.1\|2240433_2241303_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	67.0
WP_004175259.1\|2241334_2242225_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	34.2
WP_021313307.1\|2242239_2242794_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_004175261.1\|2242973_2244140_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
WP_032409012.1\|2244565_2244688_-	small membrane protein	NA	NA	NA	NA
WP_004175262.1\|2245087_2246092_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.8e-31	29.5

DBSCAN-SWA_4

2371232 : 2509405

154

Enterobacteria_phage(22.58%)

head,plate,holin,portal,capsid,tRNA,transposase,tail,protease,integrase,terminase

attL 2428307:2428325|attR 2466055:2466073

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000059623.1\|2371232_2372495_-\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	4.8e-74	39.3
WP_002911729.1\|2373062_2373980_+	nitrogen assimilation transcriptional regulator NAC	NA	NA	NA	NA
WP_032418726.1\|2374086_2375037_+	HTH-type transcriptional regulator Cbl	NA	NA	NA	NA
WP_060578873.1\|2375115_2376057_+	L,D-transpeptidase	NA	NA	NA	NA
WP_004141160.1\|2376435_2377356_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002911718.1\|2377496_2377886_+	RidA family protein	NA	NA	NA	NA
WP_004227143.1\|2378551_2379352_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_010675356.1\|2380416_2381157_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	3.5e-32	36.9
WP_010675355.1\|2381143_2382643_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	5.8e-18	27.5
WP_032418728.1\|2383041_2383269_-	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	3.8e-30	78.4
WP_055314382.1\|2383576_2384485_-	DUF550 domain-containing protein	A0A193GZ33	Enterobacter_phage	7.7e-42	63.9
WP_055314381.1\|2384477_2385554_-	DGQHR domain-containing protein	T1SBJ4	Salmonella_phage	2.1e-147	74.1
WP_032418730.1\|2385681_2386467_-	hypothetical protein	A4JX52	Burkholderia_virus	1.4e-60	50.2
WP_032418731.1\|2386466_2386766_-	hypothetical protein	K7PJS4	Enterobacterial_phage	3.8e-14	46.7
WP_032418732.1\|2386853_2387771_-	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	3.1e-46	36.9
WP_016530207.1\|2388217_2388877_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	7.3e-74	62.7
WP_016530206.1\|2388969_2389167_+	Cro/Cl family transcriptional regulator	H9C161	Pectobacterium_phage	2.7e-16	66.1
WP_004213338.1\|2389192_2389654_+	hypothetical protein	K7PJS5	Enterobacterial_phage	1.7e-69	88.2
WP_001208720.1\|2389891_2390071_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	4.6e-15	73.1
WP_032418734.1\|2390060_2391029_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.0e-84	66.4
WP_032418735.1\|2391234_2392059_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	2.6e-113	69.5
WP_032418736.1\|2392068_2392446_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	3.3e-47	72.8
WP_032418737.1\|2392458_2393439_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	8.4e-135	67.2
WP_032418738.1\|2393452_2394031_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.7e-50	56.7
WP_032418739.1\|2394182_2394422_+	hypothetical protein	NA	NA	NA	NA
WP_057182115.1\|2394592_2394892_+\|holin	phage holin family protein	A0A286N2Q5	Klebsiella_phage	1.5e-39	84.8
WP_032418741.1\|2394888_2395428_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	2.0e-101	98.9
WP_032418742.1\|2395424_2395772_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.1e-40	81.7
WP_032418743.1\|2395768_2396044_+	hypothetical protein	A0A286N2Q8	Klebsiella_phage	3.9e-05	70.3
WP_032418744.1\|2395994_2396189_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	4.6e-21	87.3
WP_022065473.1\|2396546_2396792_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.6e-34	98.8
WP_032419453.1\|2397303_2397654_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	4.6e-51	80.7
WP_004884285.1\|2397785_2398280_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	1.2e-81	92.0
WP_032418747.1\|2398276_2400007_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	9.2e-302	83.4
WP_004899640.1\|2400201_2401431_+\|portal	phage portal protein	U5P411	Shigella_phage	1.7e-201	81.5
WP_004884313.1\|2401417_2402071_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	2.1e-105	87.4
WP_021313628.1\|2402085_2403294_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	9.9e-194	84.5
WP_021313627.1\|2403332_2403536_+	hypothetical protein	M1FN89	Enterobacteria_phage	1.4e-07	42.4
WP_021313626.1\|2403532_2403853_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	4.8e-15	43.1
WP_032408655.1\|2403861_2404200_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	1.4e-41	74.1
WP_019705270.1\|2404196_2404646_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	6.7e-63	82.6
WP_016530186.1\|2404642_2404990_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.8e-32	63.7
WP_021313623.1\|2405046_2405751_+	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	2.5e-80	66.9
WP_029497345.1\|2405781_2406186_+\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	3.2e-32	56.9
WP_032418748.1\|2406188_2406494_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	1.4e-27	63.6
WP_016530182.1\|2406567_2406801_+	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
WP_032418749.1\|2406861_2410248_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	2.5e-303	57.9
WP_023301979.1\|2410268_2410742_+	hypothetical protein	A0A286S298	Klebsiella_phage	4.6e-54	60.8
WP_021313618.1\|2410728_2411214_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	3.0e-53	66.2
WP_021313617.1\|2411223_2411604_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	2.1e-57	80.2
WP_032418750.1\|2411600_2414684_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	71.9
WP_065768445.1\|2414745_2416971_+	hypothetical protein	A0A2H5BNQ4	Klebsiella_phage	2.3e-273	76.1
WP_032419560.1\|2417181_2417472_-	hypothetical protein	NA	NA	NA	NA
WP_057184564.1\|2417526_2419236_-	hypothetical protein	H6X4Y8	Enterobacteria_phage	1.2e-16	37.0
WP_032418751.1\|2419368_2419947_+	recombinase family protein	A0A286S1P7	Klebsiella_phage	2.2e-90	93.4
WP_004892499.1\|2419997_2420420_+	hypothetical protein	K7P834	Enterobacteria_phage	1.8e-25	44.5
WP_004178082.1\|2420852_2422340_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004216505.1\|2422740_2422980_+	hypothetical protein	I6PD82	Cronobacter_phage	7.5e-21	54.4
WP_032418752.1\|2422982_2423309_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.6e-26	53.9
WP_002911596.1\|2423912_2425058_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.1e-117	58.7
WP_004151461.1\|2425596_2425878_+	hypothetical protein	NA	NA	NA	NA
WP_002911594.1\|2425920_2426628_+	phosphohydrolase	S4W232	Pandoravirus	2.8e-07	27.7
WP_014343261.1\|2426704_2428105_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.9e-101	53.0
WP_032419454.1\|2428085_2428580_+	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	9.7e-31	50.7
2428307:2428325	attL	NA	NA	NA	NA
WP_004184683.1\|2428554_2429466_-	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_002911591.1\|2429649_2430561_+	DUF808 domain-containing protein	NA	NA	NA	NA
WP_032418754.1\|2430675_2432355_+	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	3.1e-20	41.1
WP_002911589.1\|2432654_2432876_-	YodD family protein	NA	NA	NA	NA
WP_002911586.1\|2433009_2433201_+	protein DsrB	NA	NA	NA	NA
WP_002911561.1\|2433233_2433857_-	transcriptional regulator RcsA	NA	NA	NA	NA
WP_004189223.1\|2434229_2434664_+	lipoprotein	NA	NA	NA	NA
WP_004189225.1\|2434705_2436193_-	alpha-amylase	NA	NA	NA	NA
WP_004141135.1\|2436393_2437194_+	cystine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004180445.1\|2437289_2438276_+	D-cysteine desulfhydrase	NA	NA	NA	NA
WP_002911547.1\|2438291_2438960_+	cystine ABC transporter permease	NA	NA	NA	NA
WP_004151455.1\|2438956_2439709_+	L-cystine ABC transporter ATP-binding protein YecC	G3M9Y6	Bacillus_virus	2.2e-26	34.4
WP_002911542.1\|2440026_2440749_+	transcriptional regulator SdiA	NA	NA	NA	NA
WP_002911541.1\|2440816_2441041_-	DUF2594 family protein	NA	NA	NA	NA
WP_002911539.1\|2441502_2442159_+	UvrY/SirA/GacA family response regulator transcription factor	NA	NA	NA	NA
WP_002911538.1\|2442155_2443988_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_002911537.1\|2444045_2444594_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_032418755.1\|2445167_2446175_-\|integrase	tyrosine-type recombinase/integrase	Q1I119	Pasteurella_virus	1.3e-103	56.5
WP_050598706.1\|2446171_2447038_-	hypothetical protein	NA	NA	NA	NA
WP_032418756.1\|2447054_2447684_-	membrane protein	NA	NA	NA	NA
WP_077261143.1\|2447693_2448122_-	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	1.0e-07	38.5
WP_032418759.1\|2448394_2448598_+	hypothetical protein	P79674	Haemophilus_phage	6.4e-05	37.1
WP_050598721.1\|2448820_2449018_+	hypothetical protein	NA	NA	NA	NA
WP_032418760.1\|2449034_2449433_+	hypothetical protein	NA	NA	NA	NA
WP_032418761.1\|2449442_2449715_+	hypothetical protein	NA	NA	NA	NA
WP_032418762.1\|2449783_2450008_+	hypothetical protein	NA	NA	NA	NA
WP_032418763.1\|2450004_2450583_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	3.2e-33	41.1
WP_032418764.1\|2450591_2450819_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	5.5e-05	49.0
WP_032418765.1\|2450815_2451010_+	hypothetical protein	NA	NA	NA	NA
WP_032418766.1\|2451002_2451956_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	3.6e-82	56.3
WP_162900880.1\|2451955_2452129_+	hypothetical protein	NA	NA	NA	NA
WP_156851987.1\|2452139_2452295_+	hypothetical protein	NA	NA	NA	NA
WP_032418767.1\|2452270_2453287_+	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	1.9e-97	55.1
WP_032418768.1\|2453279_2455874_+	replication endonuclease	A0A0M4RTM8	Salmonella_phage	1.2e-196	52.4
WP_032418769.1\|2456070_2457072_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_032418771.1\|2457807_2458854_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	5.8e-142	69.1
WP_032418772.1\|2458853_2460575_-	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	6.2e-226	66.2
WP_032418773.1\|2460735_2461569_+\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	1.1e-95	65.6
WP_032418774.1\|2461593_2462643_+\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	5.7e-105	55.0
WP_032418775.1\|2462690_2463590_+\|terminase	terminase	B9A7B6	Serratia_phage	3.5e-87	77.0
WP_032418776.1\|2463692_2464190_+\|head	head completion/stabilization protein	B9A7B7	Serratia_phage	1.2e-60	71.5
WP_032424783.1\|2464189_2464390_+\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	2.3e-15	66.2
WP_032418778.1\|2464380_2464662_+	hypothetical protein	B9A7B8	Serratia_phage	1.1e-18	57.1
WP_032418779.1\|2464658_2465210_+	lysozyme	Q1I0Z1	Pasteurella_virus	9.2e-30	41.3
WP_050598707.1\|2465206_2465602_+	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_032418780.1\|2465746_2466205_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	6.2e-32	48.1
2466055:2466073	attR	NA	NA	NA	NA
WP_032418781.1\|2466201_2466843_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.5e-44	48.3
WP_032418782.1\|2466842_2467421_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	5.1e-63	62.6
WP_032418783.1\|2467417_2467786_+	GPW/gp25 family protein	A0A0A7NQ90	Enterobacteria_phage	2.3e-29	58.3
WP_032418784.1\|2467772_2468672_+\|plate	baseplate J/gp47 family protein	A0A0A7NPY5	Enterobacteria_phage	6.2e-92	60.9
WP_032418785.1\|2468664_2469261_+\|tail	phage tail protein I	A0A0M4R4W9	Salmonella_phage	1.5e-41	46.3
WP_055314425.1\|2471478_2471769_+	hypothetical protein	NA	NA	NA	NA
WP_032418787.1\|2471868_2473026_+\|tail	phage tail protein	S4TP62	Salmonella_phage	2.5e-45	49.8
WP_032418788.1\|2473153_2473642_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.6e-49	65.0
WP_032418789.1\|2473653_2476593_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	2.6e-208	44.2
WP_101972624.1\|2476573_2476750_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.5e-10	69.8
WP_032418790.1\|2476746_2477046_-	hypothetical protein	B9A7B2	Serratia_phage	3.1e-32	73.7
WP_032418791.1\|2477100_2477616_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.6e-63	70.0
WP_032418792.1\|2477615_2478797_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7NV69	Enterobacteria_phage	1.2e-156	69.3
WP_032418793.1\|2478950_2480105_+	phage late control D family protein	B9A7A9	Serratia_phage	4.2e-178	80.7
WP_044785060.1\|2480149_2480398_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_004180444.1\|2480784_2481666_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_023316206.1\|2481764_2482433_+	YecA family protein	NA	NA	NA	NA
WP_004151453.1\|2482457_2483669_-	tyrosine transporter TyrP	NA	NA	NA	NA
WP_004175410.1\|2483860_2484100_+	YecH family protein	NA	NA	NA	NA
WP_004141101.1\|2484135_2484633_-	non-heme ferritin	NA	NA	NA	NA
WP_020956668.1\|2484690_2484870_-	hypothetical protein	NA	NA	NA	NA
WP_002911528.1\|2485041_2485680_+	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_002911524.1\|2487301_2487553_+	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_002911522.1\|2487590_2489102_-	MFS transporter	NA	NA	NA	NA
WP_004148869.1\|2489167_2489326_+	succinate dehydrogenase	NA	NA	NA	NA
WP_004175413.1\|2489396_2489906_-	non-heme ferritin-like protein	NA	NA	NA	NA
WP_160525722.1\|2490340_2490439_-	hypothetical protein	NA	NA	NA	NA
WP_002911518.1\|2490800_2491781_+	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_032418795.1\|2491843_2493358_+	L-arabinose ABC transporter ATP-binding protein AraG	A0A2R8FG22	Brazilian_cedratvirus	4.1e-11	30.0
WP_002911507.1\|2493372_2494353_+	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_002911505.1\|2494514_2495303_+	trehalose-phosphatase	NA	NA	NA	NA
WP_004175414.1\|2495277_2496702_+	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_002911500.1\|2496725_2497154_-	universal stress protein UspC	NA	NA	NA	NA
WP_002911499.1\|2497507_2499091_+	MFS transporter	NA	NA	NA	NA
WP_004184668.1\|2499095_2500235_+	glycoside hydrolase family 105 protein	NA	NA	NA	NA
WP_004151452.1\|2500296_2502030_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	1.4e-87	33.8
WP_002911491.1\|2502265_2502835_+	VOC family protein	NA	NA	NA	NA
WP_032418796.1\|2502911_2503655_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_023316208.1\|2503736_2504741_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_002911486.1\|2504737_2505481_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.1e-25	30.0
WP_002911484.1\|2505520_2505916_-	MAPEG family protein	NA	NA	NA	NA
WP_002911483.1\|2505968_2506787_-	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	1.1e-60	82.7
WP_004145564.1\|2506783_2507350_-	hydrolase	NA	NA	NA	NA
WP_002911479.1\|2507617_2509405_+\|tRNA	aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	1.3e-11	27.2

DBSCAN-SWA_5

2615186 : 2697862

Klebsiella_phage(20.0%)

head,plate,holin,portal,capsid,tRNA,tail,protease,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004180410.1\|2615186_2616830_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4
WP_002910717.1\|2616879_2617356_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002910715.1\|2617454_2618381_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004175494.1\|2618684_2619980_+	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
WP_004145468.1\|2619991_2620801_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_021312745.1\|2621041_2622304_-	DUF3596 domain-containing protein	A0A286S1S8	Klebsiella_phage	1.7e-233	95.0
WP_019725112.1\|2622351_2622594_-	excisionase family protein	A0A286S2A4	Klebsiella_phage	2.0e-29	81.3
WP_055316482.1\|2622597_2622816_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	2.9e-11	52.4
WP_032419332.1\|2622812_2623517_-	hypothetical protein	A0A1W6JP46	Morganella_phage	1.0e-25	34.3
WP_032419331.1\|2623513_2623786_-	hypothetical protein	Q716F1	Shigella_phage	3.7e-24	63.5
WP_017898877.1\|2623782_2624004_-	hypothetical protein	NA	NA	NA	NA
WP_032419330.1\|2624000_2625137_-	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	7.4e-159	73.1
WP_055316537.1\|2625133_2625790_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-113	87.0
WP_055316540.1\|2625786_2626092_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_048281026.1\|2626126_2626609_-	siphovirus Gp157 family protein	G8C7S9	Escherichia_phage	8.2e-75	93.1
WP_055316544.1\|2626605_2627520_-	recombinase RecT	G8C7T0	Escherichia_phage	4.6e-159	91.8
WP_004201105.1\|2627529_2627814_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
WP_045326713.1\|2627884_2628319_-	hypothetical protein	G0YQE7	Erwinia_phage	3.1e-41	55.1
WP_071888999.1\|2628308_2628533_-	cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	4.1e-29	90.9
WP_004219883.1\|2628525_2628651_-	hypothetical protein	NA	NA	NA	NA
WP_032453660.1\|2628986_2629676_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	5.1e-62	52.7
WP_004151299.1\|2629803_2630037_+	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	4.3e-13	50.7
WP_023304898.1\|2630077_2630299_+	hypothetical protein	NA	NA	NA	NA
WP_032419324.1\|2630384_2630531_+	hypothetical protein	NA	NA	NA	NA
WP_074441341.1\|2630571_2631423_+	DNA replication protein	F1C5C3	Cronobacter_phage	3.4e-84	56.7
WP_074184647.1\|2631427_2632843_+	AAA family ATPase	Q9MCT4	Escherichia_phage	4.6e-182	66.7
WP_012542626.1\|2632842_2633136_+	protein ren	O48423	Enterobacteria_phage	2.5e-26	65.6
WP_055316560.1\|2633132_2633618_+	hypothetical protein	R9TME7	Aeromonas_phage	4.0e-13	35.4
WP_048983288.1\|2633614_2633875_+	DUF4752 family protein	T1S9K2	Salmonella_phage	2.8e-29	75.6
WP_023283338.1\|2634499_2634712_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	2.4e-10	43.9
WP_014837641.1\|2635328_2635517_+	hypothetical protein	R9TNE4	Aeromonas_phage	1.0e-20	80.0
WP_055316555.1\|2635555_2635786_+	hypothetical protein	NA	NA	NA	NA
WP_055316552.1\|2635831_2636089_+	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	2.9e-26	75.3
WP_055316550.1\|2636290_2636758_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	7.5e-33	46.5
WP_004243010.1\|2636738_2636906_+	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
WP_055316548.1\|2636902_2637571_+	metallophosphoesterase	M9P0E4	Enterobacteria_phage	8.3e-102	76.6
WP_009483889.1\|2637563_2638202_+	recombination protein NinG	H6WRY9	Salmonella_phage	3.2e-74	68.9
WP_004884232.1\|2638198_2638339_+	YlcG family protein	NA	NA	NA	NA
WP_032413621.1\|2638335_2638836_+	antiterminator	G8C7V7	Escherichia_phage	2.5e-87	92.1
WP_057182115.1\|2639658_2639958_+\|holin	phage holin family protein	A0A286N2Q5	Klebsiella_phage	1.5e-39	84.8
WP_032418741.1\|2639954_2640494_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	2.0e-101	98.9
WP_032418742.1\|2640490_2640838_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.1e-40	81.7
WP_032418743.1\|2640834_2641110_+	hypothetical protein	A0A286N2Q8	Klebsiella_phage	3.9e-05	70.3
WP_032418744.1\|2641060_2641255_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	4.6e-21	87.3
WP_022065473.1\|2641612_2641858_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.6e-34	98.8
WP_032419453.1\|2642369_2642720_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	4.6e-51	80.7
WP_004884285.1\|2642851_2643346_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	1.2e-81	92.0
WP_032418747.1\|2643342_2645073_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	9.2e-302	83.4
WP_004899640.1\|2645267_2646497_+\|portal	phage portal protein	U5P411	Shigella_phage	1.7e-201	81.5
WP_004884313.1\|2646483_2647137_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	2.1e-105	87.4
WP_021313628.1\|2647151_2648360_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	9.9e-194	84.5
WP_021313627.1\|2648398_2648602_+	hypothetical protein	M1FN89	Enterobacteria_phage	1.4e-07	42.4
WP_021313626.1\|2648598_2648919_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	4.8e-15	43.1
WP_032408655.1\|2648927_2649266_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	1.4e-41	74.1
WP_019705270.1\|2649262_2649712_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	6.7e-63	82.6
WP_016530186.1\|2649708_2650056_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.8e-32	63.7
WP_021313623.1\|2650112_2650817_+	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	2.5e-80	66.9
WP_029497345.1\|2650847_2651252_+\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	3.2e-32	56.9
WP_032418748.1\|2651254_2651560_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	1.4e-27	63.6
WP_016530182.1\|2651633_2651867_+	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
WP_032418749.1\|2651927_2655314_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	2.5e-303	57.9
WP_023301979.1\|2655334_2655808_+	hypothetical protein	A0A286S298	Klebsiella_phage	4.6e-54	60.8
WP_021313618.1\|2655794_2656280_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	3.0e-53	66.2
WP_021313617.1\|2656289_2656670_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	2.1e-57	80.2
WP_032418750.1\|2656666_2659750_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	71.9
WP_192869082.1\|2659811_2662019_+	hypothetical protein	A0A1U9ZA50	Proteus_phage	4.7e-16	41.1
WP_032419289.1\|2662072_2662363_+	hypothetical protein	NA	NA	NA	NA
WP_002910657.1\|2663553_2664036_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_004197491.1\|2664226_2664925_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
WP_002910652.1\|2664950_2665490_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_002910650.1\|2665604_2665934_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_004200314.1\|2666502_2667843_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004180407.1\|2667839_2668493_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_032418814.1\|2668496_2670194_+	OmpA family protein	NA	NA	NA	NA
WP_071891524.1\|2673283_2675311_+	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JIA8	uncultured_Caudovirales_phage	5.2e-70	30.0
WP_023341800.1\|2675442_2676222_+	hypothetical protein	NA	NA	NA	NA
WP_032409210.1\|2676714_2677122_+	hypothetical protein	NA	NA	NA	NA
WP_004899008.1\|2677147_2677405_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_032418815.1\|2677409_2678621_+	hypothetical protein	NA	NA	NA	NA
WP_032418816.1\|2681583_2683347_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_021440342.1\|2683376_2684393_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_077256175.1\|2684373_2684910_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_032418818.1\|2684912_2685356_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_032418819.1\|2685375_2686791_+	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_032418820.1\|2686922_2687837_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004145442.1\|2687920_2688250_+	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_002910443.1\|2688330_2689422_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_004180389.1\|2689539_2690124_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_002910437.1\|2690396_2690672_+	stress-induced protein YchH	NA	NA	NA	NA
WP_002910436.1\|2690893_2691940_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_004200291.1\|2691940_2693620_-	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	1.0e-23	23.4
WP_002910407.1\|2693744_2694692_-	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	2.3e-44	37.5
WP_014343188.1\|2694875_2695724_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_002910405.1\|2695723_2696335_-	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_002910404.1\|2696605_2697862_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA

DBSCAN-SWA_6

3357695 : 3374099

Salmonella_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000608644.1\|3357695_3358958_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_000239590.1\|3359213_3360089_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_001393253.1\|3360135_3360468_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_001067855.1\|3362789_3363494_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002063889.1\|3364687_3365230_-	AAA family ATPase	NA	NA	NA	NA
WP_000557452.1\|3365242_3366103_-	aminoglycoside N-acetyltransferase AAC(3)-IIe	NA	NA	NA	NA
WP_001067855.1\|3366209_3366914_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001334766.1\|3367545_3368376_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_063840321.1\|3368506_3369061_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_001067855.1\|3369204_3369909_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001138070.1\|3370049_3373016_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	72.9
WP_000427619.1\|3373094_3374099_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

3381858 : 3388287

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001620097.1\|3381858_3382947_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004176262.1\|3383033_3383294_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620095.1\|3383591_3384452_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_002210513.1\|3384472_3385234_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_002903955.1\|3385494_3386397_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_004224682.1\|3386408_3387674_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.8e-234	99.8
WP_002210516.1\|3387666_3388287_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_8

3781436 : 3874042

Klebsiella_phage(40.43%)

head,holin,capsid,portal,tRNA,transposase,tail,integrase,terminase

attL 3772057:3772074|attR 3882309:3882326

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3772057:3772074	attL	NA	NA	NA	NA
WP_002901088.1\|3781436_3781937_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_002901080.1\|3782053_3782500_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_004140469.1\|3782483_3783278_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_020324105.1\|3783385_3784561_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_004140471.1\|3784592_3785285_-	CTP synthase	NA	NA	NA	NA
WP_004176547.1\|3785430_3785940_+	DUF523 domain-containing protein	NA	NA	NA	NA
WP_014343000.1\|3785944_3786283_+	DUF488 family protein	NA	NA	NA	NA
WP_004176548.1\|3786272_3786512_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_004176549.1\|3786812_3787826_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-12	29.0
WP_004150782.1\|3787883_3787985_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_004213093.1\|3787984_3788059_+	protein YoaJ	NA	NA	NA	NA
WP_004140488.1\|3788176_3788302_+	hypothetical protein	NA	NA	NA	NA
WP_004140489.1\|3788361_3788625_-	DUF2534 family protein	NA	NA	NA	NA
WP_004150783.1\|3788755_3789394_-	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004148038.1\|3789483_3790398_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004150784.1\|3791059_3792103_-	type II asparaginase	NA	NA	NA	NA
WP_032419083.1\|3792405_3793614_+	HD domain-containing protein	NA	NA	NA	NA
WP_032414790.1\|3793687_3795472_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_004150788.1\|3795478_3796369_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004140497.1\|3796489_3797998_+	UbiD family decarboxylase	NA	NA	NA	NA
WP_004140498.1\|3798031_3798196_+	hypothetical protein	NA	NA	NA	NA
WP_032419085.1\|3798308_3798995_-	EAL domain-containing protein	NA	NA	NA	NA
WP_032419086.1\|3799392_3799572_-	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|3799611_3800244_-	DNA-binding protein	NA	NA	NA	NA
WP_004140506.1\|3800810_3801008_+	hypothetical protein	NA	NA	NA	NA
WP_004140509.1\|3801120_3802131_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_021313534.1\|3802127_3803534_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004140512.1\|3803589_3804477_-	manganese catalase family protein	NA	NA	NA	NA
WP_004140514.1\|3804493_3805000_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004148027.1\|3805026_3805521_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004150795.1\|3805611_3805797_-	general stress protein	NA	NA	NA	NA
WP_004140529.1\|3806418_3807612_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_004140530.1\|3807724_3807952_+	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_020805510.1\|3808105_3808282_+	hypothetical protein	NA	NA	NA	NA
WP_004150797.1\|3808401_3808725_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_023159861.1\|3808717_3809110_+	ACT domain protein	NA	NA	NA	NA
WP_032419088.1\|3809106_3809820_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004892953.1\|3810092_3810245_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_048276852.1\|3810399_3811896_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	2.5e-138	69.6
WP_055320683.1\|3811957_3823174_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	50.5
WP_048276850.1\|3823236_3823830_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	1.8e-79	77.2
WP_025368256.1\|3823856_3824279_-	hypothetical protein	J9Q806	Salmonella_phage	2.9e-28	49.3
WP_032439857.1\|3824320_3825031_-	C40 family peptidase	Q6UAW4	Klebsiella_phage	3.8e-137	91.1
WP_048276849.1\|3825032_3825788_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	1.4e-124	80.5
WP_048276848.1\|3825784_3826123_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	2.4e-57	88.4
WP_048276919.1\|3826122_3829479_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	87.9
WP_014228914.1\|3829711_3830077_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
WP_014228913.1\|3830134_3830596_-\|tail	major tail shaft subunit	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
WP_014228912.1\|3830627_3831020_-	HK97 gp10 family phage protein	Q6UAX1	Klebsiella_phage	3.5e-60	93.1
WP_048263894.1\|3831025_3831415_-	hypothetical protein	Q6UAX2	Klebsiella_phage	4.0e-56	84.5
WP_014228910.1\|3831395_3831734_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	5.6e-54	91.1
WP_020317538.1\|3831730_3832048_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
WP_014907814.1\|3832028_3832289_-	hypothetical protein	Q6UAX5	Klebsiella_phage	1.5e-22	63.9
WP_055314392.1\|3832347_3833634_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	9.8e-216	89.0
WP_048276846.1\|3833711_3834632_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	1.6e-148	88.2
WP_048276845.1\|3834668_3835928_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	2.3e-222	89.8
WP_017898992.1\|3835927_3836107_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
WP_048276844.1\|3836100_3837822_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.9e-190	57.4
WP_012542168.1\|3837821_3838256_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
WP_017898991.1\|3838505_3838937_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.3
WP_014228902.1\|3838933_3839251_-	hypothetical protein	NA	NA	NA	NA
WP_017898990.1\|3839202_3839565_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	3.4e-57	81.7
WP_017898986.1\|3841314_3841665_-	hypothetical protein	R9TPM9	Aeromonas_phage	1.8e-10	39.8
WP_023279523.1\|3841661_3842159_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.9e-79	85.8
WP_017880269.1\|3842158_3842374_-\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	7.9e-30	87.3
WP_023342896.1\|3843797_3844400_-	hypothetical protein	H9C175	Pectobacterium_phage	2.4e-76	68.1
WP_048276843.1\|3844416_3845448_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.2e-96	49.6
WP_048276842.1\|3845647_3846040_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	1.0e-11	36.6
WP_077260543.1\|3846080_3846371_-	hypothetical protein	H6WRY6	Salmonella_phage	1.4e-16	56.9
WP_023279529.1\|3846382_3846616_-	DinI-like family protein	K7PM44	Enterobacteria_phage	1.3e-25	72.4
WP_004178082.1\|3846694_3848182_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_048276841.1\|3849150_3850128_+	thymidylate synthase	A0A1G5SB41	Enterococcus_phage	1.1e-22	31.5
WP_040240580.1\|3850127_3851072_+	hypothetical protein	NA	NA	NA	NA
WP_048276840.1\|3851074_3852157_-	ImmA/IrrE family metallo-endopeptidase	A0A075BTZ7	Microcystis_phage	2.1e-09	38.6
WP_169515195.1\|3852153_3852432_-	killer suppression protein HigA	NA	NA	NA	NA
WP_040240587.1\|3852625_3852892_+	MazG-like family protein	A0A2C9CX56	Yersinia_phage	8.6e-26	70.7
WP_048276838.1\|3853839_3854280_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_040240646.1\|3854293_3854758_-	replication protein	A0A0U2JGJ0	Escherichia_phage	1.7e-61	68.9
WP_040240595.1\|3854750_3855734_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	2.4e-44	55.8
WP_014907826.1\|3855785_3856340_-	hypothetical protein	NA	NA	NA	NA
WP_012542199.1\|3856342_3856558_-	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	2.0e-17	57.5
WP_012542200.1\|3856659_3857049_+	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	6.7e-35	60.2
WP_021462581.1\|3857891_3858086_+	DUF1482 family protein	NA	NA	NA	NA
WP_021462580.1\|3858128_3858473_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_055314469.1\|3858614_3860753_+	exonuclease	S4TNL0	Salmonella_phage	1.9e-99	42.9
WP_012542206.1\|3860805_3861051_+	excisionase	NA	NA	NA	NA
WP_014228877.1\|3861031_3862159_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21925	Phage_21	3.3e-119	58.4
WP_004150800.1\|3862276_3863527_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_004150801.1\|3863767_3864418_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004150802.1\|3864434_3864893_+	NUDIX hydrolase	NA	NA	NA	NA
WP_004150803.1\|3864949_3866056_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004140557.1\|3866110_3866752_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_004176557.1\|3866755_3868126_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	45.3
WP_015958193.1\|3868180_3868543_-	cupin domain-containing protein	NA	NA	NA	NA
WP_032419089.1\|3868625_3869432_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004150807.1\|3869714_3870386_+	two-component system response regulator PhoP	NA	NA	NA	NA
WP_004147969.1\|3870385_3871852_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_004176560.1\|3871937_3873059_+	cupin domain-containing protein	NA	NA	NA	NA
WP_016529718.1\|3873550_3874042_-\|transposase	transposase	NA	NA	NA	NA
3882309:3882326	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4148718 : 4158192

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023158537.1\|4148718_4150440_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|4150484_4151186_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|4151539_4151758_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|4151888_4154168_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|4154198_4154516_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|4154841_4155063_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_032419142.1\|4155139_4157080_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_055316401.1\|4157076_4158192_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_10

4632408 : 4682706

Cronobacter_phage(25.93%)

head,tRNA,lysis,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_055315071.1\|4632408_4634625_-	hypothetical protein	H6X4Y8	Enterobacteria_phage	2.1e-16	36.3
WP_055314320.1\|4634694_4637172_-	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	1.1e-196	45.3
WP_055314321.1\|4637158_4637554_-	C40 family peptidase	F1C5F2	Cronobacter_phage	6.8e-35	54.0
WP_032419293.1\|4637567_4638038_-	hypothetical protein	R9TPR6	Aeromonas_phage	9.6e-28	40.4
WP_038989546.1\|4638037_4638514_-	hypothetical protein	A0A2P1MXB5	Escherichia_phage	6.7e-37	48.4
WP_055314322.1\|4638555_4638801_-	hypothetical protein	NA	NA	NA	NA
WP_055314323.1\|4638800_4641371_-\|tail	tail protein (tape measure)	F1C5E9	Cronobacter_phage	2.9e-86	39.0
WP_055314324.1\|4641462_4641933_-	hypothetical protein	NA	NA	NA	NA
WP_055314325.1\|4641929_4642262_-	hypothetical protein	NA	NA	NA	NA
WP_023342743.1\|4642336_4642549_-	hemolysin XhlA family protein	H6WRV2	Salmonella_phage	1.0e-13	58.8
WP_077267801.1\|4643126_4644758_-	HNH endonuclease	A0A077KC96	Edwardsiella_phage	6.2e-42	42.1
WP_071890461.1\|4644841_4645237_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_055314327.1\|4645369_4645888_-	hypothetical protein	NA	NA	NA	NA
WP_055314328.1\|4645923_4646616_-	hypothetical protein	G0ZNE7	Cronobacter_phage	9.0e-67	54.4
WP_055314329.1\|4646666_4647419_-	Ig-like domain-containing protein	G0ZNE6	Cronobacter_phage	1.2e-45	45.3
WP_055314330.1\|4647487_4647877_-	hypothetical protein	G0ZNE4	Cronobacter_phage	1.7e-38	57.0
WP_055314331.1\|4647873_4648314_-	hypothetical protein	A0A1V0E5P5	Salmonella_phage	2.6e-35	52.5
WP_055314332.1\|4648316_4648664_-	hypothetical protein	G0ZNE2	Cronobacter_phage	2.4e-36	65.2
WP_055314333.1\|4648663_4648837_-	hypothetical protein	Q5G8X7	Enterobacteria_phage	1.7e-14	57.9
WP_057190316.1\|4648836_4649217_-	hypothetical protein	A0A0M3LQS8	Mannheimia_phage	1.9e-18	41.3
WP_055314335.1\|4649219_4649477_-	hypothetical protein	NA	NA	NA	NA
WP_004178847.1\|4649486_4650584_-	hypothetical protein	F1C5E1	Cronobacter_phage	4.2e-151	73.6
WP_004178846.1\|4650595_4651027_-	hypothetical protein	F1C5E0	Cronobacter_phage	1.4e-41	60.1
WP_057190314.1\|4651030_4652416_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	2.9e-165	63.8
WP_055314336.1\|4652486_4652711_-	hypothetical protein	NA	NA	NA	NA
WP_055314337.1\|4652763_4653762_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	2.0e-115	69.3
WP_055314338.1\|4653688_4655158_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	9.6e-151	56.8
WP_055314339.1\|4655170_4656643_-	hypothetical protein	A0A1W6JNY3	Morganella_phage	3.4e-249	82.7
WP_055314340.1\|4656642_4657245_-	hypothetical protein	G8C7P2	Escherichia_phage	9.3e-76	80.3
WP_055314342.1\|4657855_4658083_-	hypothetical protein	NA	NA	NA	NA
WP_055314343.1\|4658181_4658649_-\|lysis	lysis protein	Q9AZ06	Salmonella_phage	4.5e-54	72.3
WP_055314344.1\|4658645_4659140_-	lysozyme	M9P0E5	Enterobacteria_phage	1.1e-85	92.1
WP_019704119.1\|4659117_4659342_-\|holin	class II holin family protein	M9NZI9	Enterobacteria_phage	4.0e-32	91.9
WP_055314346.1\|4660133_4660823_-	antiterminator	I6PDF8	Cronobacter_phage	3.4e-58	53.2
WP_055314347.1\|4660819_4660960_-	YlcG family protein	NA	NA	NA	NA
WP_055314348.1\|4660956_4661592_-	recombination protein NinG	M9NYX8	Enterobacteria_phage	1.6e-81	77.9
WP_032413853.1\|4661584_4661755_-	NinE family protein	G8C7V4	Escherichia_phage	2.8e-14	71.4
WP_055314349.1\|4661760_4662357_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	3.6e-56	53.8
WP_048273548.1\|4662521_4662749_-	hypothetical protein	A0A193GYL4	Enterobacter_phage	1.9e-29	90.7
WP_164486760.1\|4663017_4663188_-	hypothetical protein	NA	NA	NA	NA
WP_099184339.1\|4663187_4664258_-	DUF551 domain-containing protein	R9TQX3	Aeromonas_phage	2.7e-70	67.6
WP_048328157.1\|4664262_4664451_-	hypothetical protein	A0A192Y8X2	Salmonella_phage	2.2e-23	90.3
WP_055314350.1\|4664450_4665170_-	ead/Ea22-like family protein	A0A1V0E5L5	Salmonella_phage	8.6e-28	56.2
WP_009308001.1\|4665159_4665744_-	HNH endonuclease	A0A1W6DXY0	Salmonella_phage	2.0e-30	46.0
WP_064760000.1\|4665740_4666256_-	hypothetical protein	G8C7U8	Escherichia_phage	5.4e-32	52.7
WP_055314351.1\|4666252_4666546_-	hypothetical protein	O48423	Enterobacteria_phage	7.3e-26	64.5
WP_074437728.1\|4666545_4667961_-	AAA family ATPase	Q9MCT4	Escherichia_phage	2.4e-183	66.9
WP_074437729.1\|4667965_4668817_-	DNA replication protein	F1C5C3	Cronobacter_phage	2.0e-84	56.0
WP_004151298.1\|4668857_4669004_-	hypothetical protein	NA	NA	NA	NA
WP_004139615.1\|4669089_4669311_-	bacteriophage CII family protein	NA	NA	NA	NA
WP_004178811.1\|4669350_4669584_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	3.0e-22	70.4
WP_024622727.1\|4669688_4670378_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.0e-86	70.6
WP_055314354.1\|4670636_4671476_+	protein rexA	M1FPD4	Enterobacteria_phage	2.7e-118	76.0
WP_055314355.1\|4671491_4671920_+	hypothetical protein	M1FPN8	Enterobacteria_phage	4.0e-57	79.6
WP_024622729.1\|4671949_4672153_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	1.0e-18	71.6
WP_074183191.1\|4672462_4672588_+	hypothetical protein	NA	NA	NA	NA
WP_032717012.1\|4672580_4672775_+	hypothetical protein	NA	NA	NA	NA
WP_055314356.1\|4672862_4673831_+	hypothetical protein	A0A077KCC0	Edwardsiella_phage	2.2e-39	77.7
WP_055314357.1\|4673838_4674123_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	6.6e-40	80.9
WP_055314358.1\|4674138_4674984_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	4.5e-68	58.4
WP_055314359.1\|4674980_4675661_+	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	3.0e-123	92.5
WP_055314360.1\|4675657_4676086_+	hypothetical protein	M9NYX4	Enterobacteria_phage	1.3e-63	80.3
WP_055314361.1\|4676082_4676739_+	DNA methyltransferase	G8C7S6	Escherichia_phage	1.0e-112	87.0
WP_055314362.1\|4676735_4677701_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	9.8e-144	66.8
WP_055314364.1\|4677917_4678136_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	9.5e-15	57.1
WP_055314365.1\|4678135_4678375_+	DUF4222 domain-containing protein	H6WZF9	Escherichia_phage	1.4e-11	50.0
WP_071549006.1\|4678387_4678723_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004143017.1\|4680194_4681061_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
WP_004143016.1\|4681062_4681275_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004143010.1\|4681320_4682706_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023488

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP023489

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP023487

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection