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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012920 Lactobacillus kunkeei strain MP2 chromosome, complete genome 1 crisprs cas3,csa3,DinG,DEDDh 0 1 6 0

Results visualization

1. NZ_CP012920
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012920_1 463985-464062 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP012920_1 1.1|464009|30|NZ_CP012920|CRISPRCasFinder 464009-464038 30 NZ_CP006906 Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence 162968-162997 7 0.767
NZ_CP012920_1 1.1|464009|30|NZ_CP012920|CRISPRCasFinder 464009-464038 30 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 297395-297424 7 0.767
NZ_CP012920_1 1.1|464009|30|NZ_CP012920|CRISPRCasFinder 464009-464038 30 HQ332139 Prochlorococcus phage P-RSP2 genomic sequence 13952-13981 9 0.7

1. spacer 1.1|464009|30|NZ_CP012920|CRISPRCasFinder matches to NZ_CP006906 (Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence) position: , mismatch: 7, identity: 0.767

ttttagtttcagtagttgtagcagtcttgg	CRISPR spacer
ttttagtttcattagttgtatcagcttgtt	Protospacer
*********** ******** ***..*   

2. spacer 1.1|464009|30|NZ_CP012920|CRISPRCasFinder matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.767

ttttagtttcagtagttgtagcagtcttgg	CRISPR spacer
ttttagttttagtagttttagcatttatct	Protospacer
*********.******* ***** *. *  

3. spacer 1.1|464009|30|NZ_CP012920|CRISPRCasFinder matches to HQ332139 (Prochlorococcus phage P-RSP2 genomic sequence) position: , mismatch: 9, identity: 0.7

ttttagtttcagtagttgtagcagtcttgg	CRISPR spacer
aattaatttcagcagttgtagcagttaccc	Protospacer
  ***.******.************. .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 52617 : 92027 50 Lactobacillus_phage(33.33%) integrase,tRNA,terminase,portal,transposase attL 66681:66699|attR 101789:101807
DBSCAN-SWA_2 160692 : 169900 11 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_3 779433 : 787924 9 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 808553 : 877310 56 Streptococcus_phage(30.77%) transposase,protease NA
DBSCAN-SWA_5 1037958 : 1046772 7 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 1124773 : 1132452 8 Cyanophage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage