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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010401 Bartonella ancashensis strain 20.00 chromosome, complete genome 1 crisprs cas3 0 5 3 0

Results visualization

1. NZ_CP010401
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010401_1 320309-320786 Orphan NA
10 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010401_1 1.1|320329|26|NZ_CP010401|CRT 320329-320354 26 NZ_CP017565 Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence 172054-172079 4 0.846
NZ_CP010401_1 1.3|320421|26|NZ_CP010401|CRT 320421-320446 26 NZ_CP017565 Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence 172054-172079 4 0.846
NZ_CP010401_1 1.5|320512|26|NZ_CP010401|CRT 320512-320537 26 NZ_CP026317 Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence 9330-9355 5 0.808
NZ_CP010401_1 1.7|320603|26|NZ_CP010401|CRT 320603-320628 26 NZ_CP026317 Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence 9330-9355 5 0.808
NZ_CP010401_1 1.10|320741|26|NZ_CP010401|CRT 320741-320766 26 NZ_CP026317 Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence 9330-9355 5 0.808
NZ_CP010401_1 1.5|320512|26|NZ_CP010401|CRT 320512-320537 26 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 1248592-1248617 6 0.769
NZ_CP010401_1 1.5|320512|26|NZ_CP010401|CRT 320512-320537 26 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 1385453-1385478 6 0.769
NZ_CP010401_1 1.7|320603|26|NZ_CP010401|CRT 320603-320628 26 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 1248592-1248617 6 0.769
NZ_CP010401_1 1.7|320603|26|NZ_CP010401|CRT 320603-320628 26 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 1385453-1385478 6 0.769
NZ_CP010401_1 1.10|320741|26|NZ_CP010401|CRT 320741-320766 26 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 1248592-1248617 6 0.769
NZ_CP010401_1 1.10|320741|26|NZ_CP010401|CRT 320741-320766 26 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 1385453-1385478 6 0.769

1. spacer 1.1|320329|26|NZ_CP010401|CRT matches to NZ_CP017565 (Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence) position: , mismatch: 4, identity: 0.846

gtgcaagtgggacagcgcccttcacg	CRISPR spacer
gtgcaagtgcgacagcgccgttcgag	Protospacer
********* ********* ***. *

2. spacer 1.3|320421|26|NZ_CP010401|CRT matches to NZ_CP017565 (Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence) position: , mismatch: 4, identity: 0.846

gtgcaagtgggacagcgcccttcacg	CRISPR spacer
gtgcaagtgcgacagcgccgttcgag	Protospacer
********* ********* ***. *

3. spacer 1.5|320512|26|NZ_CP010401|CRT matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 5, identity: 0.808

gtgcaagtggggcagcgcccttcacg	CRISPR spacer
acacaagtggggcagctccattcacg	Protospacer
...************* ** ******

4. spacer 1.7|320603|26|NZ_CP010401|CRT matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 5, identity: 0.808

gtgcaagtggggcagcgcccttcacg	CRISPR spacer
acacaagtggggcagctccattcacg	Protospacer
...************* ** ******

5. spacer 1.10|320741|26|NZ_CP010401|CRT matches to NZ_CP026317 (Vibrio campbellii strain BoB-90 plasmid unnamed 1, complete sequence) position: , mismatch: 5, identity: 0.808

gtgcaagtggggcagcgcccttcacg	CRISPR spacer
acacaagtggggcagctccattcacg	Protospacer
...************* ** ******

6. spacer 1.5|320512|26|NZ_CP010401|CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 6, identity: 0.769

gtgcaagtggggcagcgcccttcacg	CRISPR spacer
ccgcaagtggggcagcgccgttcgtc	Protospacer
 .***************** ***.. 

7. spacer 1.5|320512|26|NZ_CP010401|CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 6, identity: 0.769

gtgcaagtggggcagcgcccttcacg	CRISPR spacer
ccgcaagtggggcagcgccgttcgtc	Protospacer
 .***************** ***.. 

8. spacer 1.7|320603|26|NZ_CP010401|CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 6, identity: 0.769

gtgcaagtggggcagcgcccttcacg	CRISPR spacer
ccgcaagtggggcagcgccgttcgtc	Protospacer
 .***************** ***.. 

9. spacer 1.7|320603|26|NZ_CP010401|CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 6, identity: 0.769

gtgcaagtggggcagcgcccttcacg	CRISPR spacer
ccgcaagtggggcagcgccgttcgtc	Protospacer
 .***************** ***.. 

10. spacer 1.10|320741|26|NZ_CP010401|CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 6, identity: 0.769

gtgcaagtggggcagcgcccttcacg	CRISPR spacer
ccgcaagtggggcagcgccgttcgtc	Protospacer
 .***************** ***.. 

11. spacer 1.10|320741|26|NZ_CP010401|CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 6, identity: 0.769

gtgcaagtggggcagcgcccttcacg	CRISPR spacer
ccgcaagtggggcagcgccgttcgtc	Protospacer
 .***************** ***.. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 39803 : 73297 45 Acidithiobacillus_phage(26.92%) head,capsid,terminase,portal,tail,plate NA
DBSCAN-SWA_2 947450 : 957331 7 uncultured_Mediterranean_phage(71.43%) tRNA NA
DBSCAN-SWA_3 1238032 : 1244334 7 uncultured_Mediterranean_phage(83.33%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage