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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011996 Porphyromonas gingivalis AJW4 chromosome, complete genome 7 crisprs DEDDh,Csx28,cas13b,cas3 2 10 6 2

Results visualization

1. NZ_CP011996
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011996_1 381131-381263 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011996_2 499228-499501 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011996_3 519090-519196 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011996_4 651262-651358 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011996_5 1737627-1738389 TypeVI-B1,TypeVI-B2 VI-B2
11 spacers
Csx28,cas13b

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011996_6 2038592-2038699 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011996_7 2043152-2043249 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP011996_4 4.1|651294|33|NZ_CP011996|CRISPRCasFinder 651294-651326 33 NZ_CP011996.1 2069055-2069087 1 0.97
NZ_CP011996_7 7.1|2043184|34|NZ_CP011996|CRISPRCasFinder 2043184-2043217 34 NZ_CP011996.1 409739-409772 1 0.971

1. spacer 4.1|651294|33|NZ_CP011996|CRISPRCasFinder matches to position: 2069055-2069087, mismatch: 1, identity: 0.97

tcctccacgatctcggtgtctgatctgcttttt	CRISPR spacer
tcctccacgacctcggtgtctgatctgcttttt	Protospacer
**********.**********************

2. spacer 7.1|2043184|34|NZ_CP011996|CRISPRCasFinder matches to position: 409739-409772, mismatch: 1, identity: 0.971

tcttccgaaacacgtgccgcaaacgctccgattc	CRISPR spacer
tcttccgaaacacgtaccgcaaacgctccgattc	Protospacer
***************.******************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011996_2 2.2|499351|29|NZ_CP011996|PILER-CR 499351-499379 29 MN095770 Serratia phage Slocum, complete genome 48445-48473 5 0.828
NZ_CP011996_2 2.5|499426|30|NZ_CP011996|CRISPRCasFinder 499426-499455 30 NZ_CP049244 Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence 973869-973898 5 0.833
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NZ_CP028876 Borreliella bavariensis PBi plasmid lp17, complete sequence 5182-5211 5 0.833
NZ_CP011996_2 2.4|499350|30|NZ_CP011996|CRISPRCasFinder 499350-499379 30 MN095770 Serratia phage Slocum, complete genome 48444-48473 6 0.8
NZ_CP011996_2 2.5|499426|30|NZ_CP011996|CRISPRCasFinder 499426-499455 30 NZ_CP016617 Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence 543161-543190 6 0.8
NZ_CP011996_2 2.2|499351|29|NZ_CP011996|PILER-CR 499351-499379 29 NZ_CP020558 Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence 118873-118901 7 0.759
NZ_CP011996_2 2.4|499350|30|NZ_CP011996|CRISPRCasFinder 499350-499379 30 NZ_CP020558 Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence 118873-118902 7 0.767
NZ_CP011996_2 2.5|499426|30|NZ_CP011996|CRISPRCasFinder 499426-499455 30 NZ_CP011450 Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence 34803-34832 7 0.767
NZ_CP011996_2 2.5|499426|30|NZ_CP011996|CRISPRCasFinder 499426-499455 30 NZ_CP018821 Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence 92177-92206 7 0.767
NZ_CP011996_2 2.5|499426|30|NZ_CP011996|CRISPRCasFinder 499426-499455 30 NZ_AP017656 Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence 308855-308884 7 0.767
NZ_CP011996_5 5.1|1737663|31|NZ_CP011996|CRISPRCasFinder,CRT 1737663-1737693 31 NZ_CP035936 Acinetobacter cumulans strain WCHAc060092 plasmid p1_060092, complete sequence 22857-22887 7 0.774
NZ_CP011996_5 5.2|1737730|30|NZ_CP011996|CRISPRCasFinder,CRT 1737730-1737759 30 MN582107 Podoviridae sp. ctDWo9, complete genome 16218-16247 7 0.767
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NZ_CP015884 Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence 55523-55552 7 0.767
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NC_010371 Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence 127396-127425 7 0.767
NZ_CP011996_5 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1738060-1738089 30 NZ_CP032532 Bacillus megaterium NCT-2 plasmid pNCT2_4, complete sequence 92457-92486 7 0.767
NZ_CP011996_5 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1738060-1738089 30 KT264792 Gokushovirus WZ-2015a isolate 44Mky08, complete genome 3884-3913 7 0.767
NZ_CP011996_5 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1738060-1738089 30 KX513877 Human gut gokushovirus isolate SH-CHD14, complete genome 1251-1280 7 0.767
NZ_CP011996_5 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1738060-1738089 30 KC821624 Cellulophaga phage phi14:2, complete genome 29685-29714 7 0.767
NZ_CP011996_5 5.11|1738324|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1738324-1738353 30 NZ_CP014580 Burkholderia sp. OLGA172 plasmid pOLGA1, complete sequence 144826-144855 7 0.767
NZ_CP011996_2 2.2|499351|29|NZ_CP011996|PILER-CR 499351-499379 29 MN693136 Marine virus AFVG_25M110, complete genome 22513-22541 8 0.724
NZ_CP011996_2 2.5|499426|30|NZ_CP011996|CRISPRCasFinder 499426-499455 30 NZ_CP015737 Shinella sp. HZN7 plasmid pShin-01, complete sequence 119432-119461 8 0.733
NZ_CP011996_4 4.1|651294|33|NZ_CP011996|CRISPRCasFinder 651294-651326 33 NZ_CP016459 Blastomonas sp. RAC04 plasmid pBSY18_3, complete sequence 18073-18105 8 0.758
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NZ_CP014218 Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence 57124-57153 8 0.733
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NZ_CP023400 Pseudoalteromonas spongiae strain SAO4-4 plasmid pl, complete sequence 126460-126489 8 0.733
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 AP019525 Tenacibaculum phage PTm5 DNA, complete genome 199155-199184 8 0.733
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 AP019524 Tenacibaculum phage PTm1 DNA, complete genome 196966-196995 8 0.733
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NZ_KT290268 Enterococcus faecalis strain CK135 plasmid pPD1, complete sequence 16433-16462 8 0.733
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NZ_MK275623 Clostridium perfringens strain JXJA17 plasmid p5, complete sequence 21691-21720 8 0.733
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 LT960552 Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite 299169-299198 8 0.733
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 LR596615 Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I 301452-301481 8 0.733
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NC_042116 Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite 301452-301481 8 0.733
NZ_CP011996_5 5.6|1737994|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1737994-1738023 30 MT774386 CrAssphage cr110_1, complete genome 89381-89410 8 0.733
NZ_CP011996_5 5.6|1737994|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1737994-1738023 30 MN693383 Marine virus AFVG_25M295, complete genome 6163-6192 8 0.733
NZ_CP011996_5 5.6|1737994|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1737994-1738023 30 MN693263 Marine virus AFVG_25M296, complete genome 27323-27352 8 0.733
NZ_CP011996_2 2.4|499350|30|NZ_CP011996|CRISPRCasFinder 499350-499379 30 MN693136 Marine virus AFVG_25M110, complete genome 22513-22542 9 0.7
NZ_CP011996_2 2.5|499426|30|NZ_CP011996|CRISPRCasFinder 499426-499455 30 NC_041964 Pseudomonas phage R18 DNA, complete genome 29749-29778 9 0.7
NZ_CP011996_2 2.5|499426|30|NZ_CP011996|CRISPRCasFinder 499426-499455 30 NC_024123 Pseudomonas phage KPP25 DNA, complete sequence 34302-34331 9 0.7
NZ_CP011996_5 5.2|1737730|30|NZ_CP011996|CRISPRCasFinder,CRT 1737730-1737759 30 NZ_CP012254 Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence 67778-67807 9 0.7
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NZ_CP049117 Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence 80210-80239 9 0.7
NZ_CP011996_5 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT 1737862-1737891 30 NC_015695 Runella slithyformis DSM 19594 plasmid pRUNSL05, complete sequence 20418-20447 9 0.7
NZ_CP011996_5 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1738060-1738089 30 MT080596 UNVERIFIED: Staphylococcus phage vB_SauM_EW42, complete genome 28603-28632 9 0.7
NZ_CP011996_5 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR 1738060-1738089 30 MT080593 UNVERIFIED: Staphylococcus phage vB_SauM_EW36, complete genome 17064-17093 9 0.7
NZ_CP011996_2 2.5|499426|30|NZ_CP011996|CRISPRCasFinder 499426-499455 30 NZ_CP026928 Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence 142099-142128 10 0.667

1. spacer 2.2|499351|29|NZ_CP011996|PILER-CR matches to MN095770 (Serratia phage Slocum, complete genome) position: , mismatch: 5, identity: 0.828

ggtgattcattttctttgttgttcagtcc	CRISPR spacer
catgattcttttcctttgttgttcagttc	Protospacer
 .****** ***.**************.*

2. spacer 2.5|499426|30|NZ_CP011996|CRISPRCasFinder matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.833

acagcgtgaagtcgccggagaggctgattg	CRISPR spacer
agggcgcgaagtcgccggagaggctgctgg	Protospacer
* .***.******************* * *

3. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NZ_CP028876 (Borreliella bavariensis PBi plasmid lp17, complete sequence) position: , mismatch: 5, identity: 0.833

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
tttaccaaaattaaaaatacaattaataat	Protospacer
************** ** ******** *. 

4. spacer 2.4|499350|30|NZ_CP011996|CRISPRCasFinder matches to MN095770 (Serratia phage Slocum, complete genome) position: , mismatch: 6, identity: 0.8

aggtgattcattttctttgttgttcagtcc	CRISPR spacer
ccatgattcttttcctttgttgttcagttc	Protospacer
  .****** ***.**************.*

5. spacer 2.5|499426|30|NZ_CP011996|CRISPRCasFinder matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

-acagcgtgaagtcgccggagaggctgattg	CRISPR spacer
gacagt-tgaagtcgccgcagaggctgagac	Protospacer
 ****. *********** *********   

6. spacer 2.2|499351|29|NZ_CP011996|PILER-CR matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 7, identity: 0.759

ggtgattcattttctttgttgttcagtcc	CRISPR spacer
attaattcattttcttttctgttcagttt	Protospacer
. *.************* .********..

7. spacer 2.4|499350|30|NZ_CP011996|CRISPRCasFinder matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 7, identity: 0.767

aggtgattcattttctttgttgttcagtcc	CRISPR spacer
aattaattcattttcttttctgttcagttt	Protospacer
*. *.************* .********..

8. spacer 2.5|499426|30|NZ_CP011996|CRISPRCasFinder matches to NZ_CP011450 (Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence) position: , mismatch: 7, identity: 0.767

acagcgtgaagtcgccggagaggctgattg	CRISPR spacer
caagcgtgaagtcgccggggaggtagctgg	Protospacer
  ****************.****. * * *

9. spacer 2.5|499426|30|NZ_CP011996|CRISPRCasFinder matches to NZ_CP018821 (Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence) position: , mismatch: 7, identity: 0.767

acagcgtgaagtcgccggagaggctgattg	CRISPR spacer
caagcgtgaagtcgccggggaggtagctgg	Protospacer
  ****************.****. * * *

10. spacer 2.5|499426|30|NZ_CP011996|CRISPRCasFinder matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 7, identity: 0.767

acagcgtgaagtcgccggagaggctgattg	CRISPR spacer
caagcgtgaagtcgccggggaggtagctgg	Protospacer
  ****************.****. * * *

11. spacer 5.1|1737663|31|NZ_CP011996|CRISPRCasFinder,CRT matches to NZ_CP035936 (Acinetobacter cumulans strain WCHAc060092 plasmid p1_060092, complete sequence) position: , mismatch: 7, identity: 0.774

cgctcaaaacgactcaagaaaaacaaatgag	CRISPR spacer
tgctcacaacgactcaaaaaaaaccattaat	Protospacer
.***** **********.****** * *.* 

12. spacer 5.2|1737730|30|NZ_CP011996|CRISPRCasFinder,CRT matches to MN582107 (Podoviridae sp. ctDWo9, complete genome) position: , mismatch: 7, identity: 0.767

acgggaagaagaaagggccatcagggagag	CRISPR spacer
ggcggcagaagaaagggccatcggggccag	Protospacer
.  ** ****************.***  **

13. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NZ_CP015884 (Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence) position: , mismatch: 7, identity: 0.767

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
gacttcaaaagtaataaaacaattaaaaga	Protospacer
  . .***** ******.************

14. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 7, identity: 0.767

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
aagagcgagattaattagacaattaaaaga	Protospacer
   * *.*.****** **************

15. spacer 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032532 (Bacillus megaterium NCT-2 plasmid pNCT2_4, complete sequence) position: , mismatch: 7, identity: 0.767

aaggtggaaagtgttgaaaactactatgga	CRISPR spacer
aaggtgcaaagtcttgaaaactaacaataa	Protospacer
****** ***** ********** .*  .*

16. spacer 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to KT264792 (Gokushovirus WZ-2015a isolate 44Mky08, complete genome) position: , mismatch: 7, identity: 0.767

aaggtggaaagtgttgaaaactactatgga	CRISPR spacer
tatgtggaaagtgttgaaaacgcctaacgg	Protospacer
 * ******************  ***  *.

17. spacer 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to KX513877 (Human gut gokushovirus isolate SH-CHD14, complete genome) position: , mismatch: 7, identity: 0.767

aaggtggaaagtgttgaaaactactatgga	CRISPR spacer
tatgtggaaagtgttgaaaacgcctaacgg	Protospacer
 * ******************  ***  *.

18. spacer 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to KC821624 (Cellulophaga phage phi14:2, complete genome) position: , mismatch: 7, identity: 0.767

aaggtggaaagtgttgaaaactactatgga	CRISPR spacer
tatgtgtaaagtgttgaaaactaataagtt	Protospacer
 * *** **************** ** *  

19. spacer 5.11|1738324|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014580 (Burkholderia sp. OLGA172 plasmid pOLGA1, complete sequence) position: , mismatch: 7, identity: 0.767

tatctgcctgaaaacgtcatgccttgaaag	CRISPR spacer
ttccagcctgaaaacgtcacgccttgcagt	Protospacer
* .* **************.****** *. 

20. spacer 2.2|499351|29|NZ_CP011996|PILER-CR matches to MN693136 (Marine virus AFVG_25M110, complete genome) position: , mismatch: 8, identity: 0.724

ggtgattcattttctttgttgttcagtcc	CRISPR spacer
taatattctttttctttgttcttcagttg	Protospacer
 .  **** *********** ******. 

21. spacer 2.5|499426|30|NZ_CP011996|CRISPRCasFinder matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 8, identity: 0.733

acagcgtgaagtcgccggagaggctgattg	CRISPR spacer
ccagcgtgaattcgccggagacgccggcct	Protospacer
 ********* ********** **.*... 

22. spacer 4.1|651294|33|NZ_CP011996|CRISPRCasFinder matches to NZ_CP016459 (Blastomonas sp. RAC04 plasmid pBSY18_3, complete sequence) position: , mismatch: 8, identity: 0.758

tcctccacgatctcggtgtctgatctgcttttt	CRISPR spacer
tgttccgcgatctgggtgtctgatctgcagggt	Protospacer
* .***.****** **************    *

23. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NZ_CP014218 (Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence) position: , mismatch: 8, identity: 0.733

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
ggtggttaaattaataagaaaattaaaaaa	Protospacer
  *. . ************ ********.*

24. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NZ_CP023400 (Pseudoalteromonas spongiae strain SAO4-4 plasmid pl, complete sequence) position: , mismatch: 8, identity: 0.733

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
gctttaaaaataaataaaacaattaaaagg	Protospacer
 .* . ***** *****.***********.

25. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 8, identity: 0.733

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
atctgataaattaataccacaattaaaaga	Protospacer
 *.    *********  ************

26. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 8, identity: 0.733

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
atctgataaattaataccacaattaaaaga	Protospacer
 *.    *********  ************

27. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NZ_KT290268 (Enterococcus faecalis strain CK135 plasmid pPD1, complete sequence) position: , mismatch: 8, identity: 0.733

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
gacgtctaaagtaataaaacaattaaaaga	Protospacer
  ...* *** ******.************

28. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NZ_MK275623 (Clostridium perfringens strain JXJA17 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.733

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
aaaagataaattaataaaaaaattaaaaga	Protospacer
   *   **********.* **********

29. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to LT960552 (Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite) position: , mismatch: 8, identity: 0.733

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
ccaaccaaaattactaatacaattaatact	Protospacer
.. ********** *** ******** *  

30. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.733

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
ccaaccaaaattactaatacaattaatact	Protospacer
.. ********** *** ******** *  

31. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 8, identity: 0.733

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
ccaaccaaaattactaatacaattaatact	Protospacer
.. ********** *** ******** *  

32. spacer 5.6|1737994|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to MT774386 (CrAssphage cr110_1, complete genome) position: , mismatch: 8, identity: 0.733

accccttcctcattaatcataccttgttct	CRISPR spacer
ttgttttcttcattaatcatagcttgttcc	Protospacer
 . ..***.************ *******.

33. spacer 5.6|1737994|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to MN693383 (Marine virus AFVG_25M295, complete genome) position: , mismatch: 8, identity: 0.733

accccttcctcattaatcataccttgttct	CRISPR spacer
gatgtttgctcattcatcataccttgttgt	Protospacer
. . .** ****** ************* *

34. spacer 5.6|1737994|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to MN693263 (Marine virus AFVG_25M296, complete genome) position: , mismatch: 8, identity: 0.733

accccttcctcattaatcataccttgttct	CRISPR spacer
gatgtttgctcattcatcataccttgttgt	Protospacer
. . .** ****** ************* *

35. spacer 2.4|499350|30|NZ_CP011996|CRISPRCasFinder matches to MN693136 (Marine virus AFVG_25M110, complete genome) position: , mismatch: 9, identity: 0.7

aggtgattcattttctttgttgttcagtcc	CRISPR spacer
ctaatattctttttctttgttcttcagttg	Protospacer
  .  **** *********** ******. 

36. spacer 2.5|499426|30|NZ_CP011996|CRISPRCasFinder matches to NC_041964 (Pseudomonas phage R18 DNA, complete genome) position: , mismatch: 9, identity: 0.7

acagcgtgaagtcgccggagaggctgattg	CRISPR spacer
gtgatgtgaagtcgccggagctgctgatgc	Protospacer
.....***************  ******  

37. spacer 2.5|499426|30|NZ_CP011996|CRISPRCasFinder matches to NC_024123 (Pseudomonas phage KPP25 DNA, complete sequence) position: , mismatch: 9, identity: 0.7

acagcgtgaagtcgccggagaggctgattg	CRISPR spacer
gtgatgtgaagtcgccggagctgctgatgc	Protospacer
.....***************  ******  

38. spacer 5.2|1737730|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NZ_CP012254 (Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence) position: , mismatch: 9, identity: 0.7

acgggaagaagaaagggccatcagggagag	CRISPR spacer
gagggaaaaagaaagcgccatcaggcgctt	Protospacer
. *****.******* ********* .   

39. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NZ_CP049117 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
cacgatgaagttaataagaaaattaaaaga	Protospacer
. .. ..**.********* **********

40. spacer 5.4|1737862|30|NZ_CP011996|CRISPRCasFinder,CRT matches to NC_015695 (Runella slithyformis DSM 19594 plasmid pRUNSL05, complete sequence) position: , mismatch: 9, identity: 0.7

tttaccaaaattaataagacaattaaaaga	CRISPR spacer
caacgcaaaaataataagacaatgaaaatc	Protospacer
.    ***** ************ ****  

41. spacer 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to MT080596 (UNVERIFIED: Staphylococcus phage vB_SauM_EW42, complete genome) position: , mismatch: 9, identity: 0.7

aaggtggaaagtgttgaaaactactatgga	CRISPR spacer
cctacaaaacgtgttgacaactactatgga	Protospacer
   ....** ******* ************

42. spacer 5.7|1738060|30|NZ_CP011996|CRISPRCasFinder,CRT,PILER-CR matches to MT080593 (UNVERIFIED: Staphylococcus phage vB_SauM_EW36, complete genome) position: , mismatch: 9, identity: 0.7

aaggtggaaagtgttgaaaactactatgga	CRISPR spacer
cctacaaaacgtgttgacaactactatgga	Protospacer
   ....** ******* ************

43. spacer 2.5|499426|30|NZ_CP011996|CRISPRCasFinder matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 10, identity: 0.667

acagcgtgaagtcgccggagaggctgattg	CRISPR spacer
gtttagtgaagtcggcggagaggctgccat	Protospacer
..   ********* *********** .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 532190 : 592465 46 Staphylococcus_phage(20.0%) tRNA,transposase,protease NA
DBSCAN-SWA_2 715885 : 784671 58 Tupanvirus(21.43%) tRNA,transposase,integrase attL 776837:776853|attR 791890:791906
DBSCAN-SWA_3 963220 : 1033977 55 Bacillus_virus(28.57%) tRNA,transposase,protease NA
DBSCAN-SWA_4 1105850 : 1172103 54 Ralstonia_phage(20.0%) tRNA,transposase,integrase attL 1138629:1138669|attR 1188754:1188794
DBSCAN-SWA_5 1851221 : 1925222 52 Ralstonia_phage(22.22%) transposase,protease NA
DBSCAN-SWA_6 2248146 : 2307367 52 Shigella_phage(16.67%) tRNA,transposase NA
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP011996.1|WP_004584358.1|1383589_1384003_-|PcfK-like-family-protein 1383589_1384003_- 137 aa aa 40 NA NA No NA
NZ_CP011996.1|WP_039417454.1|2137270_2137693_-|PcfK-like-family-protein 2137270_2137693_- 140 aa aa 40 NA NA No NA