CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	5 crisprs	RT,cas3,cas5,cas8c,cas7,cas2,c2c10_CAS-V-U3,csa3,cas14j	1	31	2
NZ_CP010108	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-2, complete sequence	0 crisprs	NA	0	0	1
NZ_CP010110	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence	0 crisprs	csa3	0	0	0
NZ_CP010109	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-3, complete sequence	0 crisprs	NA	0	0	1
NZ_CP010106	Bacillus thuringiensis serovar indiana strain HD521 chromosome, complete genome	5 crisprs	cas3,c2c9_V-U4,csa3,WYL,DinG,DEDDh	1	3	8
NZ_CP010112	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence	0 crisprs	csa3,cas14j	0	0	1
NZ_CP010107	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-1, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP010111_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010111_1

46362-46789

TypeI

NA:I-C

Consensus_repeat	Method
GTCGCACCTCATATAGGTGCGTGGATTGAAAT	CRISPRCasFinder
ATAGGTGCGTGGATTGAAAT	CRT

6 spacers

cas3,cas5,cas8c,cas7

The CRISPR arrays of NZ_CP010111_1

>merge|NZ_CP010111|1|46362-46789|CRISPRCasFinder,CRT
GTCGCACCTCATATAGGTGCGTGGATTGAAATTGGTATACAAGGAGTAATAAGCGGAACTCATGCAGTCGCACCTCATATAGGTGTGTGGATTGAAATCCTGAGAGAAGGAAATAGGTGTTGTTATGAAGTCGTCGCACCTTAAATAGATGCGTGGATTGAAATATAGAAGGGCACTTTTAACATCGAACTCTTTAAGTCGCACCTTAAATAGGTGTGTGGATTGAAATATGCCAATCGGTGTACAAGCTGACTTTATTAACATGGCACCTTGTATAGGTGCGTGGATTGAAATTGGTCATGGATATTCGGCAATGATAGGGAAAGTATTGTCGCACCTCATTTAGGTGCGTGGATTGAAATCAATCTCTTTTACCCGTACAACGGAAGCCTGAAGGTCGCACCTTAAATAGGTGCGCAGATTGAAAT

>NZ_CP010111|1|1|46362-46789|CRISPRCasFinder
GTCGCACCTCATATAGGTGCGTGGATTGAAAT	TGGTATACAAGGAGTAATAAGCGGAACTCATGCA
GTCGCACCTCATATAGGTGTGTGGATTGAAAT	CCTGAGAGAAGGAAATAGGTGTTGTTATGAAGTC
GTCGCACCTTAAATAGATGCGTGGATTGAAAT	ATAGAAGGGCACTTTTAACATCGAACTCTTTAA
GTCGCACCTTAAATAGGTGTGTGGATTGAAAT	ATGCCAATCGGTGTACAAGCTGACTTTATTAAC
ATGGCACCTTGTATAGGTGCGTGGATTGAAAT	TGGTCATGGATATTCGGCAATGATAGGGAAAGTATT
GTCGCACCTCATTTAGGTGCGTGGATTGAAAT	CAATCTCTTTTACCCGTACAACGGAAGCCTGAAG
GTCGCACCTTAAATAGGTGCGCAGATTGAAAT

>NZ_CP010111|1|1|46374-46789|CRT
ATAGGTGCGTGGATTGAAAT	TGGTATACAAGGAGTAATAAGCGGAACTCATGCAGTCGCACCTCAT
ATAGGTGTGTGGATTGAAAT	CCTGAGAGAAGGAAATAGGTGTTGTTATGAAGTCGTCGCACCTTAA
ATAGATGCGTGGATTGAAAT	ATAGAAGGGCACTTTTAACATCGAACTCTTTAAGTCGCACCTTAA
ATAGGTGTGTGGATTGAAAT	ATGCCAATCGGTGTACAAGCTGACTTTATTAACATGGCACCTTGT
ATAGGTGCGTGGATTGAAAT	TGGTCATGGATATTCGGCAATGATAGGGAAAGTATTGTCGCACCTCAT
TTAGGTGCGTGGATTGAAAT	CAATCTCTTTTACCCGTACAACGGAAGCCTGAAGGTCGCACCTTAA
ATAGGTGCGCAGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010111.1\|WP_050822396.1\|50218_52138_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP010111.1\|WP_050822389.1\|36016_36730_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291
NZ_CP010111.1\|WP_050822394.1\|44321_46043_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822397.1\|52140_53001_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_050822385.1\|27820_28336_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_145974780.1\|54955_55120_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_050822390.1\|36747_37518_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822391.1\|38195_41003_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP010111.1\|WP_050822387.1\|30757_32467_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822400.1\|55800_56946_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|377306
NZ_CP010111.1\|WP_050822386.1\|28576_29530_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271175
NZ_CP010111.1\|WP_145974779.1\|54051_54246_+\|hypothetical-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_050822395.1\|46900_49330_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP010111.1\|WP_050822529.1\|49498_50218_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP010111.1\|WP_080989224.1\|53420_53726_+\|hypothetical-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP010111.1\|WP_050822530.1\|55178_55403_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_145974774.1\|54297_54531_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_050822393.1\|42880_43915_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822392.1\|41789_42647_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822388.1\|33545_35273_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379188

Protein	Function_ID	Function_description	E-value
NZ_CP010111.1\|WP_050822396.1\|50218_52138_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	1.82357e-167
NZ_CP010111.1\|WP_080989224.1\|53420_53726_+\|hypothetical-protein	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	5.93436e-17
NZ_CP010111.1\|WP_050822389.1\|36016_36730_-\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	2.08263e-05
NZ_CP010111.1\|WP_050822391.1\|38195_41003_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	7.8809e-08
NZ_CP010111.1\|WP_050822529.1\|49498_50218_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	1.55006e-97
NZ_CP010111.1\|WP_050822400.1\|55800_56946_+\|ATP-binding-protein	gnl\|CDD\|377306	pfam04326, AlbA_2, Putative DNA-binding domain. This family belongs to the AlbA clan of DNA-binding domains.	5.52356e-18
NZ_CP010111.1\|WP_050822386.1\|28576_29530_-\|site-specific-integrase	gnl\|CDD\|271175	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine based site-specific recombinases (integrases) that share the same fold in their catalytic domain containing conserved active site residues. The best-studied members of this diverse superfamily include Human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase, and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl generated by recombinase cleavage to a new 3' phosphate partner located in a different duplex region. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	4.63148e-15
NZ_CP010111.1\|WP_145974779.1\|54051_54246_+\|hypothetical-protein	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.70887e-17
NZ_CP010111.1\|WP_050822395.1\|46900_49330_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.51496e-79
NZ_CP010111.1\|WP_050822397.1\|52140_53001_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	4.28986e-134
NZ_CP010111.1\|WP_145974780.1\|54955_55120_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.14942e-14
NZ_CP010111.1\|WP_050822530.1\|55178_55403_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	6.13603e-22
NZ_CP010111.1\|WP_145974774.1\|54297_54531_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.02414e-19
NZ_CP010111.1\|WP_050822388.1\|33545_35273_+\|hypothetical-protein	gnl\|CDD\|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	0.0036287

>NZ_CP010111.1|WP_050822394.1|44321_46043_+|hypothetical-protein
MIQFVMVKPKKELPINYLKNKNRSISEVPLVKNYYIYEEAERAAKIKIETETKNSTALYFTEMTLETYKGIQHLFIKIEPQKIHVNDFDYNLHELKLHIKNQLRKDWAECVWLEDEQSTSISEELYGKIYRVENKLRQFINMKMIRRKGVDWWENYSPSYLKEKYKKRQNDYKMAAESFKNVNDILLSIDTDDLLKIMRYQVKKLKIQDFTKLEVMLEGIKENGEAVNLVQNYKAIVNEMKKNMDVKEDLWEGIFKEYFPENFIEEWERFCKNRNHVAHNKLLDLSALDKINENIRNVEGYLEEARKEFDKELSEEEETEALEYIEEEEYKKELHELYIMEQQAGVSILDANMIFDKFEEVINQFIEDIDDTYYFRNDIKIEKNKMSIVKSEQDLLNISSKINDDILEVKSKLNIEEVQQGESEVLLKLIINGKMIEECSLKYINGGAEFQKDLGYYLPTSYNEFSQKGFEEFVEHISEFIEDYFPNLKEEMEIEMYIAAKDGGNNPVADFPCEECGEEYVCINDDIGEQGMCLNCGAKHEVSTCERCKVTYNQNIDGEEYLCENCMEHYLGE
>NZ_CP010111.1|WP_050822393.1|42880_43915_+|hypothetical-protein
MDRLETIAVSKIATVISNQTIIKTNEHSKWDRILSNAGQSSLYSEFSTSLEPYYFNGVFKNENPSFEQFFSSIKTILHKVYQGGDNAEEFTLFLGTIVEEIKIEDLFDDTSLVFLPRKYQRSLDPIGDFFKEKSEEECQDYIIKNAKDDFQLLKNNLNILNLDIYFRKGRLNLKPFTEQSNGVLRNTSILLEWLEDNYPNVAKLYQEAIDNYIAGNSVSCISNCRNIITGFFSHYKDNGNRSWTKGLQNISTDTYIENVTAPNNIAQGSANTKIIFDGPNEFKYPRFNLIYSLYTLTSDLGAHTAESPKIEGVLYPERTTLNDALLTLRMTEDVLIWSKEQLKN
>NZ_CP010111.1|WP_050822392.1|41789_42647_+|hypothetical-protein
MKSISEKIVLCVGIGFILIGGVRFLGYSISSLVIALISIFAALISISDVLEITRYKKYGNWIQNTALVIIVAIIVFLVYPLNIAPSIISTIGDSFTIIGLGLVILLFGWKEIQEKRSNKEPVESNEMIKNCKFQIVVNEYEQMMKLNDMIEKLKKLDQEANSYNRVHSGWGIFCECLFDYWNQDEGPFFDGYNQQKHYEFICALNNATKAIANTSFFDANYSIKRELQIFNHNFDVTLDPLMKHIELPNIDDLMKEVYNALLLWEELKGLVNRRYEQGRLNYKES
>NZ_CP010111.1|WP_050822391.1|38195_41003_+|hypothetical-protein
MSITILELENQLKEANINNTVSLTNLPFLSQEVQQRLLQINNDVEIIVESSQISVQEEVVILKGKVSLLGIDSFDAMFQFMIVEEQVEFIAKIPVPDTMPLSFGITELSLNNILIEINTNTQSNEILKAILSGNVNLEGQVINLIKDLLADEIFSGNIPTFSLQSIISVLCGKNIQIPGISDLTIQNAHFIINVSSTNTSVNLWANVNNFGRLQLLTSNYAGSWEYIAILSLPNEWKFSSISSILSVLDSLKFGEPKLTISSVTDSSALILSEDSQEQTISVVEGLYFSGILQMEGLGLELLRVLLKISEIPIGGLIGQNPANTKFEADLYPQLDLLGITFNDVGLVLQVEPFIIGIQLSTIVQIQDDTLQFNGGIQLEQAGASYKLTMPGKWEKPFGIPILDIENVLLQFKTNPDPKLAVAGDISFGDDLLVNVICEFTSSGVPSALMGRLDGELSISRLIRVFTGISIPEGFLDISVSDVSIYIVANPLGTDISSPGPDNRVIHYPFGFNVHGQMHTYGIDATSQIYIQENGISLDGQLTPINVGNVLRIYGETMEQGPKVLYRATAEEPFLFQLDAGIQILGATLNTHILLKHDGFEFAFSEKIFNAFNASIEAEATGELSQGNFYIRASMHNDMIEYVNNQTRQMLQEITSSADSNVSNKQTEISNVEQQLASLNDEIEKRIKEINDAIKDANEALNIKEKEKDAAEKILRKAEKVRDRAASALEEVKKRKNDIKKLLRDLKKQLLDARNIFDPVSQARTIKRLVKDIADWEKELGKVDDELNPLNELNDTVKLRKKEFNAATKALKKAQQHLDSILPIERDPFILSKQVVKVTVNQQIELLRLQLGLLQVFAVKAAQVVAFITGQGIELLFNVSRISFEGNIQSVGAGQVSLSMDVSFMGGTQNIELDFNFQDHVSGIRSLSERLVHSLS
>NZ_CP010111.1|WP_050822390.1|36747_37518_-|hypothetical-protein
MSNVQNEDRDYLEFDMNEIKLCSAYEALSQETRNIEVPENKTLTLSPANRELAGAFSRVPLESFKDLQLLGFIPSGLDEEKIRNAISNDDDENYRMALTTPNWNTRKCSCEGHGTEDLKSVGQDFHFTYSNIRERYHPALANLLSEFYRTRISADSPLASNIKKFITKWDRLRYENNIAISTIFKDIVINRGATLIIPPINTSLLAHNIWFHQTANMIHQGGYLKIWASAIHTFKILSAEDFEAWSSEKPSWLIRN
>NZ_CP010111.1|WP_050822389.1|36016_36730_-|hypothetical-protein
MPNIIGNGLPGKDGTDGFDFTTPVQQGIKGNDANCNWLDDDCAQSGGPGGHGVQGGTGGPGGHAGHGSTIDIEVNSFSAFVALSAIGGTGGNGGSGGKGQDGGKGGNGGNGRGCELGAVGGNGGNGGDAGIGGKGGNGGNGGTIVVRTRNIADGNQSVIDISGGAAGRGGTPGDPGLAGPPGDPGATTEYFSTSSDCPRMGFQPIWGRAGLNPDPEKSSLGNGAVGEKGNSQFLQIP
>NZ_CP010111.1|WP_050822388.1|33545_35273_+|hypothetical-protein
MERLTQLFTDALLISEPLYGNNKVVWNKWTAYSSDVEKDNTKVVTSQYVSPSFSALVSWLSKKNEEGITSLQIGIKLKEYKDEIHATIEKVLEDEFKTANKFNDGTIIQGDVNEDETDEPVDKEYFEVNNSAVYFKLRDGISKNHFEEDSGMGVKSYPIETKESNAIAQLSSHRDEDLKLIKDDEASRWNTLVNDVMSNMDDLTADVLDSITIQWLAQAKSPDEFIEFSYEQVLDMCNVPKKKVSKGEYYRPEDKIKVAKRIAALASIFIYLNDDNEVVVLNEENEHDEKYKVKREVVKRLFVLDSVVLWRHNTTNEYMGIESCRIKPGSFLTSYLYGSNNTTALLSKKALEYNSYRHKYHKRLIRYLTWQWRIRQIYSTLKRPYSIGGDKGLLAVMAIPLTWKPSRIREHLENVLSDLEKENVISKWEYTVSLDEERFNKKNWFKDYWVNLNITILPPEELIKSMYNLPKKKTLELENNTEASVDCFEHARDAVNMSPKKNSEELNRFDEEAVREKILKQRKVDNKSIRELAKEIRISAPTLSRFCNRETKRLSANAVEKMSKWYERQGILEKM
>NZ_CP010111.1|WP_050822387.1|30757_32467_-|hypothetical-protein
MGKSFVIRNQRSLNGETTNAVLVTLKSWQKFVETFEEKYYSYKDTYLEDILQHMTYEDRIADVEGFVEKAKPSFSRRTMSALAEKAGRKHKLYGITNADLEVFLYLHKKCFTNGVIPNVTIHMMWEDYKQYKEELAYIQHSQFYIALKKLSLHNIISIENGLDSRYTIKLTHFMNEETEKANPYVYISPVVFTKAFFKLSVAAKKLFLDIAMQQHTETTLKRSLDKQDERGNKTHFGGMYRFLHKKYPHQIRAVIEELTTALPCTGNPLFKICKMQKGVKHTKRYTTLYLSIHSDFLCSKEAGEEQHRDPFTPKATYARKAKFIEAVLQEMNIGELSADMNKFIHVLKHTCHRQIRSVIRGLRDMVDRKEGYPTKIVYTLKKLLHQTSQYQILDTAAKEGIYPLIAQHIPKERNSEREQAIFNFGLHYSMYSLRNIKKMFKNVHALLKQKFAVPVTEESYHRNYLKYQEETLFRKYAYDQGVNLHAYIALEIEMREKLKVRGHKERTIPSDVREWFIEAIDKLPQEQLRVIELPKQFNLLEFMRTFERLVRAGVTITAPDQVLHAMEIK
>NZ_CP010111.1|WP_050822386.1|28576_29530_-|site-specific-integrase
MSENINLEETLAAFSAYLTEKGRKQSTIERYAYDIKDFYKWLRANEKLLHIKSWSQLSEADYQTYFSELEDKRKYSQKTRHRIWVVLKKLHMFLGIVSPLDDINLSLIPDQSLNDNDFITEMEEKLLKQTVLSTKSLTERQAKYRPLIMDRNVCLINLIINYGLSLQELVSLNMSHIKFATNTLMVPGENGATRSVSLTMEDKQQLYKYYTTIPDPVRPRQHTDNPLFVAFDFNRGTYRWVYENDAPKALSEVAIQKMIRLEVKRAELNRRISAQQMRNTFILRLIKQGLTEDELVSRMGFKTKISLKRYFRYLQHT
>NZ_CP010111.1|WP_050822385.1|27820_28336_-|hypothetical-protein
MKKTIISVLTATILLGGGSLASAEEKTTNNLTSPLITSQNSYQQLAGNWVVDTFNGPTNMFIAGNTPNDATTAIPKFKLRSNATVSIKGWQETTANGQPPKVWYKLVDTETNRTIDTIEISSEYKQHGTWYYRTFDNTKVTANKNYRVDVVNKSDYGTRIGFDLYNNVYAN
>NZ_CP010111.1|WP_050822395.1|46900_49330_+|CRISPR-associated-helicase/endonuclease-Cas3
MTYIAHIRESDSQVQTVEEHLLGVKELAETYGEKIGIKHLAGLAGMLHDMGKYTNEFKEYILEAVNNPNSPPKRGSVDHSTAGGKLLYQLFHTENMIPYKGIISEIVGNAIISHHGYLQDFLNPDLESPYLNRVRDKQLRGFDVTKQFFFKHVMKEKDFHEYVDKATVELESFLLKESPENAEKQLMFLTKFIFSTLIDADRTNTRLFEEEKSVESVINSDELFEKYYERLMIKINSFKKQQNANTPINMLRADMSDQCDQFAERPSGIYTLSIPTGGGKTLASLRYALKHANTHNKKRIIYVVPFTTIIEQNAEEVRRILEDEENILEHHSNIVEEVNEHDENEDGMVSIQQKLKLAKDNWDSPIIFTTMVQFLNVFYAKGNRNTRRLHNLSEAIIIFDEVQKVPVSCVSLFNQALNFLKIYTRSSIVLCTATQPALDFVEQKLDINTDAEMINNLDHVIEAFKRVKIIDQATNEIFNKDKLKTFIHTKIEEVQSILIVLNTKSVVRDLYTELQSQGLNVPIYHLSTTMCAAHRHKILEEVRECLKEGRKIICISTQLIEAGVDVSFECVVRSLSGLDSIAQAAGRCNRHGEKGIQNVYVIDYEEENLSHLKEIKIGKKITKKILMDLKHNDKIHGGHILSREAMKRYFKEYYREFESDLDYFIPKLKKNMTELLSVPRIENSYRRAYIHKHDKKDIPLFIINSYQTAAKHFNVIDDITTSVIVPYEEGKDIIAELNSNNSIEDLSRLLRKAQQYTVNLFNYEKEKLIIDDGLVYYLDGKILALKESAYNDEYGLNVLNESDFKTAIF
>NZ_CP010111.1|WP_050822529.1|49498_50218_+|type-I-C-CRISPR-associated-protein-Cas5
MRNSIEFEVFGDYALFTDPLMKMGGEKLTYQVPTYQAIKGIVESIYWKPTLLMIIDKIRIMNAIKMESKGIRPIEYGGGNTLANYTYLKNVRYQVQAHFIFNPHRPDLAFDRNEYKHHNILKRSLKVGGRRDIFLGTRECQGYVEPCVFGEGEGFYDNYGGDIHLGTMVHGLNYPDETGRNELEVRLWNPVMRDGIIQFIRPEECTKIRKISKMEPKIFDSSNVESVDELIKQLEEGGE
>NZ_CP010111.1|WP_050822396.1|50218_52138_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYQSNLDRVGKIEKKYNGQEYTLLPISHTTQSANIEVLITEEGEFHSATVIDKSDANTLIPCTEDSASRSGTGAYKVPHPLHDKLTYVAGDFGEYGGSKKEEESFGYYIEQLRNWVESPYTTDKLKSIYKYLRKKQLVKDLVETKILWLDENQKLIGKWDKKVEVFLGNKPEIFTVLPAGQEAAFVRFTVYSPNKMLSKVWQDKEIHNSFINFYDGLLDNEDYCYVTGEIKPSTDKHAKKIRNASDQAKLISSNDLRGFTFRGRFTTSNEVANISYDVSQKAHNALKWLINKQGKIIDQRVFLVWGNDAEDVPDIVEDSYNIFSMDIRGTKKREIKSYTHEQFANEVAKAIDGYKNNLSSSENVNILLLDSATTGRLAVLYYRNMDKNLYLNKLKNWHSTCVWEHGYRKNADNEFVKFYGAPSTRDIAFAAYGPKVNEKVVKSLMERMLPCIIDERKIPFDIVRSAFQRASNPLSMEKWEWEKTLSITCALINTMEGYQLVLDKENNNRDYLFGRLLAVADVLERKALNNGDQRATNARRYMNSFSQHPERTWRTIQGALQPYQARLGEKVWYYNKLIDEIGSMIKIEDFNNKPLSGKYLLGFYSQRHELYQKKEKNVSLNDAVNIGEEN
>NZ_CP010111.1|WP_050822397.1|52140_53001_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MKTLDHKIDFAVVLSVTKANPNGDPLNGNRPRQNYDGHGEISDVAIKRKIRNRLQDMEESIFVQSNDRKVDQFNSLRERAETNADLVKALKSKDNPHEQFAAIACKEWIDVRSFGQVFAFKGGAGKGVSVGVRGPVSIHTATSVDPIDITSMQITKSVNSEPGKDKGSDTMGMKHRVDFGVYVSYGSINTQLAEKTGFTNEDAEKIKNALVTLFENDASAARPEGSIEVHKVCWWDHNSKLGQYSSAKVHRLLEVKRNIDEPKTIDDYTVLVHELDDLKVEVINGM
>NZ_CP010111.1|WP_080989224.1|53420_53726_+|hypothetical-protein
MHKATSVNSIDITSMQITKSVNSQHGRDKVLDTMERKHRVDFGVYVCWWDHNSKPGQYSFAKVHRLLEAKRNIEELKKIDDYTTVLVHELEGLKVEIINGM
>NZ_CP010111.1|WP_145974779.1|54051_54246_+|hypothetical-protein
MSAGVRGTASIHTETSVDPIDITSMQITKSINSDPEKDKVSHTMGMKHDVDLGAYIFYESIHMQ
>NZ_CP010111.1|WP_145974774.1|54297_54531_+|CRISPR-associated-protein-Csd2
MVTLFGNDGSAARPEGSIEVHKVCWWKHNSKLGQYSFAKVHRLLDNKRNIDEPKIIDDYNILVKELDILKVAIIDGL
>NZ_CP010111.1|WP_145974780.1|54955_55120_+|CRISPR-associated-protein-Csd2
MHTATSVDPIDITSMQITICINSESEKDKGSDTMGMNHRFDLGAHIFYGSIHMQ
>NZ_CP010111.1|WP_050822530.1|55178_55403_+|CRISPR-associated-protein-Csd2
MFGNDASAARPEGSIEVHKVCWWDHKSKIGQYSSAKVHRLLEVKRNIDEPKPIDDYTVLVHELDGLKVEIINGM
>NZ_CP010111.1|WP_050822400.1|55800_56946_+|ATP-binding-protein
MNNNFMIKIKNLILSKSEGEFWDFKQEWHRDNERLLHDILCFANTVHEKDCYIIIGVSDNGDIVGINDENRRKQSSIIDLLANTVFAGDNNPRIQIDTINIEHKKVDILTIFNSNNVPYYLKSKSKKYNSIKEGYIYTRVGDRNTPINQNATIQQIEMLWKKRLGLTLPPLLQIESRLQDKTEWVDSNNCSYNIYKPEFKLVEKFIDDEYDNSRSEFYVYTQTNSKFTYKTLDIMCNETVLDTFQLVVLDSGRYKTPIPEWGHVGFDKWNVKHKYTYKYYLKDSITYKLQQFFFNAENQEEVFAKRRLDEVVLYFENQEELESFEDYIESNQSIVEQYLAKVKKNRFFVDMGNELEVQVENYRLSVGLALNKALQEFRIRK

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP010111_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010111_2

53811-53960

TypeI

Consensus_repeat	Method
AGGTGCGTGGATTGAAAT	PILER-CR

2 spacers

cas7,cas8c,cas5,cas3,cas2

The CRISPR arrays of NZ_CP010111_2

>merge|NZ_CP010111|2|53811-53960|PILER-CR
AGGTGCGTGGATTGAAATTCTACAGGTACTAGAACATCGTTTAGTGGTTTTGGTCGCACCTTATATAGGTGCGCGGATTGAAATTTTTAAAGCCAGCCTTCCAACCCAAAAAGTTAGGGTCGCACCTCTTGCAGGTGCGTGGATTGAAAT

>NZ_CP010111|2|1|53811-53960|PILER-CR
AGGTGCGTGGATTGAAAT	TCTACAGGTACTAGAACATCGTTTAGTGGTTTTGGTCGCACCTTATAT
AGGTGCGCGGATTGAAAT	TTTTAAAGCCAGCCTTCCAACCCAAAAAGTTAGGGTCGCACCTCTTGC
AGGTGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010111.1\|WP_080989224.1\|53420_53726_+\|hypothetical-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP010111.1\|WP_050822396.1\|50218_52138_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP010111.1\|WP_050822394.1\|44321_46043_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822401.1\|59558_60650_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|100107
NZ_CP010111.1\|WP_050822390.1\|36747_37518_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822391.1\|38195_41003_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP010111.1\|WP_050822395.1\|46900_49330_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP010111.1\|WP_050822400.1\|55800_56946_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|377306
NZ_CP010111.1\|WP_145974779.1\|54051_54246_+\|hypothetical-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_098392979.1\|57766_58156_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_050822529.1\|49498_50218_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP010111.1\|WP_050822397.1\|52140_53001_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_145974780.1\|54955_55120_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_044306554.1\|57217_57454_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP010111.1\|WP_050822530.1\|55178_55403_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_145974774.1\|54297_54531_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_050822393.1\|42880_43915_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_044306882.1\|58880_59297_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822392.1\|41789_42647_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822402.1\|60665_60893_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP010111.1\|WP_080989224.1\|53420_53726_+\|hypothetical-protein	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	5.93436e-17
NZ_CP010111.1\|WP_050822396.1\|50218_52138_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	1.82357e-167
NZ_CP010111.1\|WP_050822401.1\|59558_60650_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|100107	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).	0.000371844
NZ_CP010111.1\|WP_050822391.1\|38195_41003_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	7.8809e-08
NZ_CP010111.1\|WP_050822395.1\|46900_49330_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.51496e-79
NZ_CP010111.1\|WP_050822400.1\|55800_56946_+\|ATP-binding-protein	gnl\|CDD\|377306	pfam04326, AlbA_2, Putative DNA-binding domain. This family belongs to the AlbA clan of DNA-binding domains.	5.52356e-18
NZ_CP010111.1\|WP_145974779.1\|54051_54246_+\|hypothetical-protein	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.70887e-17
NZ_CP010111.1\|WP_098392979.1\|57766_58156_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.81203e-32
NZ_CP010111.1\|WP_050822529.1\|49498_50218_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	1.55006e-97
NZ_CP010111.1\|WP_050822397.1\|52140_53001_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	4.28986e-134
NZ_CP010111.1\|WP_145974780.1\|54955_55120_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.14942e-14
NZ_CP010111.1\|WP_044306554.1\|57217_57454_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.6178e-28
NZ_CP010111.1\|WP_050822530.1\|55178_55403_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	6.13603e-22
NZ_CP010111.1\|WP_145974774.1\|54297_54531_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.02414e-19

>NZ_CP010111.1|WP_080989224.1|53420_53726_+|hypothetical-protein
MHKATSVNSIDITSMQITKSVNSQHGRDKVLDTMERKHRVDFGVYVCWWDHNSKPGQYSFAKVHRLLEAKRNIEELKKIDDYTTVLVHELEGLKVEIINGM
>NZ_CP010111.1|WP_050822397.1|52140_53001_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MKTLDHKIDFAVVLSVTKANPNGDPLNGNRPRQNYDGHGEISDVAIKRKIRNRLQDMEESIFVQSNDRKVDQFNSLRERAETNADLVKALKSKDNPHEQFAAIACKEWIDVRSFGQVFAFKGGAGKGVSVGVRGPVSIHTATSVDPIDITSMQITKSVNSEPGKDKGSDTMGMKHRVDFGVYVSYGSINTQLAEKTGFTNEDAEKIKNALVTLFENDASAARPEGSIEVHKVCWWDHNSKLGQYSSAKVHRLLEVKRNIDEPKTIDDYTVLVHELDDLKVEVINGM
>NZ_CP010111.1|WP_050822396.1|50218_52138_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYQSNLDRVGKIEKKYNGQEYTLLPISHTTQSANIEVLITEEGEFHSATVIDKSDANTLIPCTEDSASRSGTGAYKVPHPLHDKLTYVAGDFGEYGGSKKEEESFGYYIEQLRNWVESPYTTDKLKSIYKYLRKKQLVKDLVETKILWLDENQKLIGKWDKKVEVFLGNKPEIFTVLPAGQEAAFVRFTVYSPNKMLSKVWQDKEIHNSFINFYDGLLDNEDYCYVTGEIKPSTDKHAKKIRNASDQAKLISSNDLRGFTFRGRFTTSNEVANISYDVSQKAHNALKWLINKQGKIIDQRVFLVWGNDAEDVPDIVEDSYNIFSMDIRGTKKREIKSYTHEQFANEVAKAIDGYKNNLSSSENVNILLLDSATTGRLAVLYYRNMDKNLYLNKLKNWHSTCVWEHGYRKNADNEFVKFYGAPSTRDIAFAAYGPKVNEKVVKSLMERMLPCIIDERKIPFDIVRSAFQRASNPLSMEKWEWEKTLSITCALINTMEGYQLVLDKENNNRDYLFGRLLAVADVLERKALNNGDQRATNARRYMNSFSQHPERTWRTIQGALQPYQARLGEKVWYYNKLIDEIGSMIKIEDFNNKPLSGKYLLGFYSQRHELYQKKEKNVSLNDAVNIGEEN
>NZ_CP010111.1|WP_050822529.1|49498_50218_+|type-I-C-CRISPR-associated-protein-Cas5
MRNSIEFEVFGDYALFTDPLMKMGGEKLTYQVPTYQAIKGIVESIYWKPTLLMIIDKIRIMNAIKMESKGIRPIEYGGGNTLANYTYLKNVRYQVQAHFIFNPHRPDLAFDRNEYKHHNILKRSLKVGGRRDIFLGTRECQGYVEPCVFGEGEGFYDNYGGDIHLGTMVHGLNYPDETGRNELEVRLWNPVMRDGIIQFIRPEECTKIRKISKMEPKIFDSSNVESVDELIKQLEEGGE
>NZ_CP010111.1|WP_050822395.1|46900_49330_+|CRISPR-associated-helicase/endonuclease-Cas3
MTYIAHIRESDSQVQTVEEHLLGVKELAETYGEKIGIKHLAGLAGMLHDMGKYTNEFKEYILEAVNNPNSPPKRGSVDHSTAGGKLLYQLFHTENMIPYKGIISEIVGNAIISHHGYLQDFLNPDLESPYLNRVRDKQLRGFDVTKQFFFKHVMKEKDFHEYVDKATVELESFLLKESPENAEKQLMFLTKFIFSTLIDADRTNTRLFEEEKSVESVINSDELFEKYYERLMIKINSFKKQQNANTPINMLRADMSDQCDQFAERPSGIYTLSIPTGGGKTLASLRYALKHANTHNKKRIIYVVPFTTIIEQNAEEVRRILEDEENILEHHSNIVEEVNEHDENEDGMVSIQQKLKLAKDNWDSPIIFTTMVQFLNVFYAKGNRNTRRLHNLSEAIIIFDEVQKVPVSCVSLFNQALNFLKIYTRSSIVLCTATQPALDFVEQKLDINTDAEMINNLDHVIEAFKRVKIIDQATNEIFNKDKLKTFIHTKIEEVQSILIVLNTKSVVRDLYTELQSQGLNVPIYHLSTTMCAAHRHKILEEVRECLKEGRKIICISTQLIEAGVDVSFECVVRSLSGLDSIAQAAGRCNRHGEKGIQNVYVIDYEEENLSHLKEIKIGKKITKKILMDLKHNDKIHGGHILSREAMKRYFKEYYREFESDLDYFIPKLKKNMTELLSVPRIENSYRRAYIHKHDKKDIPLFIINSYQTAAKHFNVIDDITTSVIVPYEEGKDIIAELNSNNSIEDLSRLLRKAQQYTVNLFNYEKEKLIIDDGLVYYLDGKILALKESAYNDEYGLNVLNESDFKTAIF
>NZ_CP010111.1|WP_050822394.1|44321_46043_+|hypothetical-protein
MIQFVMVKPKKELPINYLKNKNRSISEVPLVKNYYIYEEAERAAKIKIETETKNSTALYFTEMTLETYKGIQHLFIKIEPQKIHVNDFDYNLHELKLHIKNQLRKDWAECVWLEDEQSTSISEELYGKIYRVENKLRQFINMKMIRRKGVDWWENYSPSYLKEKYKKRQNDYKMAAESFKNVNDILLSIDTDDLLKIMRYQVKKLKIQDFTKLEVMLEGIKENGEAVNLVQNYKAIVNEMKKNMDVKEDLWEGIFKEYFPENFIEEWERFCKNRNHVAHNKLLDLSALDKINENIRNVEGYLEEARKEFDKELSEEEETEALEYIEEEEYKKELHELYIMEQQAGVSILDANMIFDKFEEVINQFIEDIDDTYYFRNDIKIEKNKMSIVKSEQDLLNISSKINDDILEVKSKLNIEEVQQGESEVLLKLIINGKMIEECSLKYINGGAEFQKDLGYYLPTSYNEFSQKGFEEFVEHISEFIEDYFPNLKEEMEIEMYIAAKDGGNNPVADFPCEECGEEYVCINDDIGEQGMCLNCGAKHEVSTCERCKVTYNQNIDGEEYLCENCMEHYLGE
>NZ_CP010111.1|WP_050822393.1|42880_43915_+|hypothetical-protein
MDRLETIAVSKIATVISNQTIIKTNEHSKWDRILSNAGQSSLYSEFSTSLEPYYFNGVFKNENPSFEQFFSSIKTILHKVYQGGDNAEEFTLFLGTIVEEIKIEDLFDDTSLVFLPRKYQRSLDPIGDFFKEKSEEECQDYIIKNAKDDFQLLKNNLNILNLDIYFRKGRLNLKPFTEQSNGVLRNTSILLEWLEDNYPNVAKLYQEAIDNYIAGNSVSCISNCRNIITGFFSHYKDNGNRSWTKGLQNISTDTYIENVTAPNNIAQGSANTKIIFDGPNEFKYPRFNLIYSLYTLTSDLGAHTAESPKIEGVLYPERTTLNDALLTLRMTEDVLIWSKEQLKN
>NZ_CP010111.1|WP_050822392.1|41789_42647_+|hypothetical-protein
MKSISEKIVLCVGIGFILIGGVRFLGYSISSLVIALISIFAALISISDVLEITRYKKYGNWIQNTALVIIVAIIVFLVYPLNIAPSIISTIGDSFTIIGLGLVILLFGWKEIQEKRSNKEPVESNEMIKNCKFQIVVNEYEQMMKLNDMIEKLKKLDQEANSYNRVHSGWGIFCECLFDYWNQDEGPFFDGYNQQKHYEFICALNNATKAIANTSFFDANYSIKRELQIFNHNFDVTLDPLMKHIELPNIDDLMKEVYNALLLWEELKGLVNRRYEQGRLNYKES
>NZ_CP010111.1|WP_050822391.1|38195_41003_+|hypothetical-protein
MSITILELENQLKEANINNTVSLTNLPFLSQEVQQRLLQINNDVEIIVESSQISVQEEVVILKGKVSLLGIDSFDAMFQFMIVEEQVEFIAKIPVPDTMPLSFGITELSLNNILIEINTNTQSNEILKAILSGNVNLEGQVINLIKDLLADEIFSGNIPTFSLQSIISVLCGKNIQIPGISDLTIQNAHFIINVSSTNTSVNLWANVNNFGRLQLLTSNYAGSWEYIAILSLPNEWKFSSISSILSVLDSLKFGEPKLTISSVTDSSALILSEDSQEQTISVVEGLYFSGILQMEGLGLELLRVLLKISEIPIGGLIGQNPANTKFEADLYPQLDLLGITFNDVGLVLQVEPFIIGIQLSTIVQIQDDTLQFNGGIQLEQAGASYKLTMPGKWEKPFGIPILDIENVLLQFKTNPDPKLAVAGDISFGDDLLVNVICEFTSSGVPSALMGRLDGELSISRLIRVFTGISIPEGFLDISVSDVSIYIVANPLGTDISSPGPDNRVIHYPFGFNVHGQMHTYGIDATSQIYIQENGISLDGQLTPINVGNVLRIYGETMEQGPKVLYRATAEEPFLFQLDAGIQILGATLNTHILLKHDGFEFAFSEKIFNAFNASIEAEATGELSQGNFYIRASMHNDMIEYVNNQTRQMLQEITSSADSNVSNKQTEISNVEQQLASLNDEIEKRIKEINDAIKDANEALNIKEKEKDAAEKILRKAEKVRDRAASALEEVKKRKNDIKKLLRDLKKQLLDARNIFDPVSQARTIKRLVKDIADWEKELGKVDDELNPLNELNDTVKLRKKEFNAATKALKKAQQHLDSILPIERDPFILSKQVVKVTVNQQIELLRLQLGLLQVFAVKAAQVVAFITGQGIELLFNVSRISFEGNIQSVGAGQVSLSMDVSFMGGTQNIELDFNFQDHVSGIRSLSERLVHSLS
>NZ_CP010111.1|WP_050822390.1|36747_37518_-|hypothetical-protein
MSNVQNEDRDYLEFDMNEIKLCSAYEALSQETRNIEVPENKTLTLSPANRELAGAFSRVPLESFKDLQLLGFIPSGLDEEKIRNAISNDDDENYRMALTTPNWNTRKCSCEGHGTEDLKSVGQDFHFTYSNIRERYHPALANLLSEFYRTRISADSPLASNIKKFITKWDRLRYENNIAISTIFKDIVINRGATLIIPPINTSLLAHNIWFHQTANMIHQGGYLKIWASAIHTFKILSAEDFEAWSSEKPSWLIRN
>NZ_CP010111.1|WP_145974779.1|54051_54246_+|hypothetical-protein
MSAGVRGTASIHTETSVDPIDITSMQITKSINSDPEKDKVSHTMGMKHDVDLGAYIFYESIHMQ
>NZ_CP010111.1|WP_145974774.1|54297_54531_+|CRISPR-associated-protein-Csd2
MVTLFGNDGSAARPEGSIEVHKVCWWKHNSKLGQYSFAKVHRLLDNKRNIDEPKIIDDYNILVKELDILKVAIIDGL
>NZ_CP010111.1|WP_145974780.1|54955_55120_+|CRISPR-associated-protein-Csd2
MHTATSVDPIDITSMQITICINSESEKDKGSDTMGMNHRFDLGAHIFYGSIHMQ
>NZ_CP010111.1|WP_050822530.1|55178_55403_+|CRISPR-associated-protein-Csd2
MFGNDASAARPEGSIEVHKVCWWDHKSKIGQYSSAKVHRLLEVKRNIDEPKPIDDYTVLVHELDGLKVEIINGM
>NZ_CP010111.1|WP_050822400.1|55800_56946_+|ATP-binding-protein
MNNNFMIKIKNLILSKSEGEFWDFKQEWHRDNERLLHDILCFANTVHEKDCYIIIGVSDNGDIVGINDENRRKQSSIIDLLANTVFAGDNNPRIQIDTINIEHKKVDILTIFNSNNVPYYLKSKSKKYNSIKEGYIYTRVGDRNTPINQNATIQQIEMLWKKRLGLTLPPLLQIESRLQDKTEWVDSNNCSYNIYKPEFKLVEKFIDDEYDNSRSEFYVYTQTNSKFTYKTLDIMCNETVLDTFQLVVLDSGRYKTPIPEWGHVGFDKWNVKHKYTYKYYLKDSITYKLQQFFFNAENQEEVFAKRRLDEVVLYFENQEELESFEDYIESNQSIVEQYLAKVKKNRFFVDMGNELEVQVENYRLSVGLALNKALQEFRIRK
>NZ_CP010111.1|WP_044306554.1|57217_57454_+|CRISPR-associated-endonuclease-Cas2
MWRKVSKTCQNYGQRVQNSVFECVVDAAQFATLKMELIKIIDEDEDSLRFYQLGNNYKNKVEHIGIMESVDLESPLIF
>NZ_CP010111.1|WP_098392979.1|57766_58156_+|CRISPR-associated-protein-Csd2
MGAWVEIKEDAILNRVRIVAPYIGAWIEIASVTHLAEKTGFSNEDVEKIKNTLVTLFENDASAACPEGSIEVHKVCWWKHKSKIGQYASAKVHRLLEVNRNIDEPKTINDYNILVNELDSLNVVIIDGL
>NZ_CP010111.1|WP_044306882.1|58880_59297_+|hypothetical-protein
MKKDCRYLRLVPTVEEHEIRIETYQQNSYTSSTMSSETRGRLNQMRGCFEAEIILPDGKFQYFKPNTLNEKEAIHEIALFIEGIQEAKGGYVILWRFVGQQSFYQGTKVVAEPKFRTFLRKVKDYLFDYEELIYETEK
>NZ_CP010111.1|WP_050822401.1|59558_60650_+|class-I-SAM-dependent-methyltransferase
MRLGNDLAAGFYPTPLTEGKHLMQLLKMESERAYACFDPCCGEGTILRSFADETKQAGVQFHTYGVELDANRYGQAKEQLDVVVRSSFESMMISHNYFPLIFLNPPYNTELRTENTKSEKMEFNFLKRAHLYLQDGGVMVYVISYDCFAQDEISYFLAKNYEEIGVMRFGDENEEFEQFKQCVFVGRKRAATKNDTYFNDRFANFCENMSDLAFVRKHVNTLAEMVTHKSWVIPELRHQNKLIFTSRVDYKDAYKGIGKSEGIASLKKRLNRGNGYSLQGEKTAAERAKMPIASGQLGLLLITGVADGLLGEGDTLHAVRGSENVFFETSFEKLETTTKEVVLQKRRAKFIIATPKGEVKELV
>NZ_CP010111.1|WP_050822402.1|60665_60893_+|hypothetical-protein
MSVLLGLGALYIVWEFSNRIFRIAIVLTVMCLCASQFSAGTHLVVLEQFSMFQGAGDMLHAAEQSLPEWKQFIDF

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP010111_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010111_3

57624-57852

TypeI

NA:I-C

Consensus_repeat	Method
GTCGCACCTTATATGGGTGCGTGG	CRISPRCasFinder
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	CRT

3 spacers

cas2,cas7,cas8c,cas5

The CRISPR arrays of NZ_CP010111_3

>merge|NZ_CP010111|3|57624-57852|CRISPRCasFinder,CRT
GTCGCACCTTATATAGGTGCGTGGATTGAAATGCTAGAGACGATATCAGTTATTACTTAGCAAAAAGTCGCACCTTGTATAGGTGTGTGGATTGAAATATGGAAATGGAACGTTCTTACGGATCAAAAGAAGTCGCACCTTATATGGGTGCGTGGGTTGAAATTAAAGAGGATGCTATCCTAAACAGAGTTCGGATTGTCGCACCTTATATAGGTGCGTGGATTGAAAT

>NZ_CP010111|3|2|57624-57844|CRISPRCasFinder
GTCGCACCTTATATAGGTGCGTGG	ATTGAAATGCTAGAGACGATATCAGTTATTACTTAGCAAAAA
GTCGCACCTTGTATAGGTGTGTGG	ATTGAAATATGGAAATGGAACGTTCTTACGGATCAAAAGAA
GTCGCACCTTATATGGGTGCGTGG	GTTGAAATTAAAGAGGATGCTATCCTAAACAGAGTTCGGATT
GTCGCACCTTATATAGGTGCGTGG

>NZ_CP010111|3|2|57624-57852|CRT
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	GCTAGAGACGATATCAGTTATTACTTAGCAAAAA
GTCGCACCTTGTATAGGTGTGTGGATTGAAAT	ATGGAAATGGAACGTTCTTACGGATCAAAAGAA
GTCGCACCTTATATGGGTGCGTGGGTTGAAAT	TAAAGAGGATGCTATCCTAAACAGAGTTCGGATT
GTCGCACCTTATATAGGTGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010111.1\|WP_080989224.1\|53420_53726_+\|hypothetical-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP010111.1\|WP_050822396.1\|50218_52138_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP010111.1\|WP_050822404.1\|64271_64985_+\|transposase	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822401.1\|59558_60650_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|100107
NZ_CP010111.1\|WP_017762473.1\|65949_66585_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822403.1\|60964_64255_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223627
NZ_CP010111.1\|WP_000377388.1\|66635_67250_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822400.1\|55800_56946_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|377306
NZ_CP010111.1\|WP_145974779.1\|54051_54246_+\|hypothetical-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_050822529.1\|49498_50218_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP010111.1\|WP_050822397.1\|52140_53001_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_145974780.1\|54955_55120_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_044306554.1\|57217_57454_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP010111.1\|WP_050822530.1\|55178_55403_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_017762474.1\|65320_65950_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822405.1\|67233_67818_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_145974774.1\|54297_54531_+\|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP010111.1\|WP_044306882.1\|58880_59297_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_080989226.1\|67943_68327_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822402.1\|60665_60893_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP010111.1\|WP_080989224.1\|53420_53726_+\|hypothetical-protein	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	5.93436e-17
NZ_CP010111.1\|WP_050822396.1\|50218_52138_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	1.82357e-167
NZ_CP010111.1\|WP_050822401.1\|59558_60650_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|100107	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).	0.000371844
NZ_CP010111.1\|WP_050822403.1\|60964_64255_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	1.92124e-05
NZ_CP010111.1\|WP_050822400.1\|55800_56946_+\|ATP-binding-protein	gnl\|CDD\|377306	pfam04326, AlbA_2, Putative DNA-binding domain. This family belongs to the AlbA clan of DNA-binding domains.	5.52356e-18
NZ_CP010111.1\|WP_145974779.1\|54051_54246_+\|hypothetical-protein	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.70887e-17
NZ_CP010111.1\|WP_050822529.1\|49498_50218_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	1.55006e-97
NZ_CP010111.1\|WP_050822397.1\|52140_53001_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	4.28986e-134
NZ_CP010111.1\|WP_145974780.1\|54955_55120_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.14942e-14
NZ_CP010111.1\|WP_044306554.1\|57217_57454_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.6178e-28
NZ_CP010111.1\|WP_050822530.1\|55178_55403_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	6.13603e-22
NZ_CP010111.1\|WP_145974774.1\|54297_54531_+\|CRISPR-associated-protein-Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.02414e-19

>NZ_CP010111.1|WP_044306554.1|57217_57454_+|CRISPR-associated-endonuclease-Cas2
MWRKVSKTCQNYGQRVQNSVFECVVDAAQFATLKMELIKIIDEDEDSLRFYQLGNNYKNKVEHIGIMESVDLESPLIF
>NZ_CP010111.1|WP_050822400.1|55800_56946_+|ATP-binding-protein
MNNNFMIKIKNLILSKSEGEFWDFKQEWHRDNERLLHDILCFANTVHEKDCYIIIGVSDNGDIVGINDENRRKQSSIIDLLANTVFAGDNNPRIQIDTINIEHKKVDILTIFNSNNVPYYLKSKSKKYNSIKEGYIYTRVGDRNTPINQNATIQQIEMLWKKRLGLTLPPLLQIESRLQDKTEWVDSNNCSYNIYKPEFKLVEKFIDDEYDNSRSEFYVYTQTNSKFTYKTLDIMCNETVLDTFQLVVLDSGRYKTPIPEWGHVGFDKWNVKHKYTYKYYLKDSITYKLQQFFFNAENQEEVFAKRRLDEVVLYFENQEELESFEDYIESNQSIVEQYLAKVKKNRFFVDMGNELEVQVENYRLSVGLALNKALQEFRIRK
>NZ_CP010111.1|WP_050822530.1|55178_55403_+|CRISPR-associated-protein-Csd2
MFGNDASAARPEGSIEVHKVCWWDHKSKIGQYSSAKVHRLLEVKRNIDEPKPIDDYTVLVHELDGLKVEIINGM
>NZ_CP010111.1|WP_145974780.1|54955_55120_+|CRISPR-associated-protein-Csd2
MHTATSVDPIDITSMQITICINSESEKDKGSDTMGMNHRFDLGAHIFYGSIHMQ
>NZ_CP010111.1|WP_145974774.1|54297_54531_+|CRISPR-associated-protein-Csd2
MVTLFGNDGSAARPEGSIEVHKVCWWKHNSKLGQYSFAKVHRLLDNKRNIDEPKIIDDYNILVKELDILKVAIIDGL
>NZ_CP010111.1|WP_145974779.1|54051_54246_+|hypothetical-protein
MSAGVRGTASIHTETSVDPIDITSMQITKSINSDPEKDKVSHTMGMKHDVDLGAYIFYESIHMQ
>NZ_CP010111.1|WP_080989224.1|53420_53726_+|hypothetical-protein
MHKATSVNSIDITSMQITKSVNSQHGRDKVLDTMERKHRVDFGVYVCWWDHNSKPGQYSFAKVHRLLEAKRNIEELKKIDDYTTVLVHELEGLKVEIINGM
>NZ_CP010111.1|WP_050822397.1|52140_53001_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MKTLDHKIDFAVVLSVTKANPNGDPLNGNRPRQNYDGHGEISDVAIKRKIRNRLQDMEESIFVQSNDRKVDQFNSLRERAETNADLVKALKSKDNPHEQFAAIACKEWIDVRSFGQVFAFKGGAGKGVSVGVRGPVSIHTATSVDPIDITSMQITKSVNSEPGKDKGSDTMGMKHRVDFGVYVSYGSINTQLAEKTGFTNEDAEKIKNALVTLFENDASAARPEGSIEVHKVCWWDHNSKLGQYSSAKVHRLLEVKRNIDEPKTIDDYTVLVHELDDLKVEVINGM
>NZ_CP010111.1|WP_050822396.1|50218_52138_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYQSNLDRVGKIEKKYNGQEYTLLPISHTTQSANIEVLITEEGEFHSATVIDKSDANTLIPCTEDSASRSGTGAYKVPHPLHDKLTYVAGDFGEYGGSKKEEESFGYYIEQLRNWVESPYTTDKLKSIYKYLRKKQLVKDLVETKILWLDENQKLIGKWDKKVEVFLGNKPEIFTVLPAGQEAAFVRFTVYSPNKMLSKVWQDKEIHNSFINFYDGLLDNEDYCYVTGEIKPSTDKHAKKIRNASDQAKLISSNDLRGFTFRGRFTTSNEVANISYDVSQKAHNALKWLINKQGKIIDQRVFLVWGNDAEDVPDIVEDSYNIFSMDIRGTKKREIKSYTHEQFANEVAKAIDGYKNNLSSSENVNILLLDSATTGRLAVLYYRNMDKNLYLNKLKNWHSTCVWEHGYRKNADNEFVKFYGAPSTRDIAFAAYGPKVNEKVVKSLMERMLPCIIDERKIPFDIVRSAFQRASNPLSMEKWEWEKTLSITCALINTMEGYQLVLDKENNNRDYLFGRLLAVADVLERKALNNGDQRATNARRYMNSFSQHPERTWRTIQGALQPYQARLGEKVWYYNKLIDEIGSMIKIEDFNNKPLSGKYLLGFYSQRHELYQKKEKNVSLNDAVNIGEEN
>NZ_CP010111.1|WP_050822529.1|49498_50218_+|type-I-C-CRISPR-associated-protein-Cas5
MRNSIEFEVFGDYALFTDPLMKMGGEKLTYQVPTYQAIKGIVESIYWKPTLLMIIDKIRIMNAIKMESKGIRPIEYGGGNTLANYTYLKNVRYQVQAHFIFNPHRPDLAFDRNEYKHHNILKRSLKVGGRRDIFLGTRECQGYVEPCVFGEGEGFYDNYGGDIHLGTMVHGLNYPDETGRNELEVRLWNPVMRDGIIQFIRPEECTKIRKISKMEPKIFDSSNVESVDELIKQLEEGGE
>NZ_CP010111.1|WP_044306882.1|58880_59297_+|hypothetical-protein
MKKDCRYLRLVPTVEEHEIRIETYQQNSYTSSTMSSETRGRLNQMRGCFEAEIILPDGKFQYFKPNTLNEKEAIHEIALFIEGIQEAKGGYVILWRFVGQQSFYQGTKVVAEPKFRTFLRKVKDYLFDYEELIYETEK
>NZ_CP010111.1|WP_050822401.1|59558_60650_+|class-I-SAM-dependent-methyltransferase
MRLGNDLAAGFYPTPLTEGKHLMQLLKMESERAYACFDPCCGEGTILRSFADETKQAGVQFHTYGVELDANRYGQAKEQLDVVVRSSFESMMISHNYFPLIFLNPPYNTELRTENTKSEKMEFNFLKRAHLYLQDGGVMVYVISYDCFAQDEISYFLAKNYEEIGVMRFGDENEEFEQFKQCVFVGRKRAATKNDTYFNDRFANFCENMSDLAFVRKHVNTLAEMVTHKSWVIPELRHQNKLIFTSRVDYKDAYKGIGKSEGIASLKKRLNRGNGYSLQGEKTAAERAKMPIASGQLGLLLITGVADGLLGEGDTLHAVRGSENVFFETSFEKLETTTKEVVLQKRRAKFIIATPKGEVKELV
>NZ_CP010111.1|WP_050822402.1|60665_60893_+|hypothetical-protein
MSVLLGLGALYIVWEFSNRIFRIAIVLTVMCLCASQFSAGTHLVVLEQFSMFQGAGDMLHAAEQSLPEWKQFIDF
>NZ_CP010111.1|WP_050822403.1|60964_64255_+|DEAD/DEAH-box-helicase
MLQEIIKQDTFDQEQTPAMLQLETGTASHSAFCFAMAINHHREIQFAVLGANDSTLKSFRAAISMGSSRLYFGEGKKEELHYILDKKVNVNSKGQFEFINTQTVNKKKAIIAFSRELEEKYIVAIDEAPEIQVRDFLMVPPYGLPILEEWAKPIYDEMLTRNLLQPLEVYFDKNEFSSLTIAQVLLKEKDCKEFLSEMIRSGKCQFPQEGTGERINEINDLNEYLLEYSPVMLDKVTKLDEPLHQPMKDQALSHFDTYKRPLFPVQTHVATGAAKALQVQKGIIIQGEMSSGKSAIMTATVDGYFYLTGKKGYRTCVFVPPTLTEKWAKEEIRHLIPDAEVHLIKRTEDLIRIHQSWIQAGRPKPEKPTYFVISFTTMRGDSIKQMPLPYKKIALSKKSEEEVQRYYKNGYYCPDCGAKLRKKTSSIMVQQANGEQKEVCQYKDFTGSDLDSKTNKNSVCADCNSNIWSPKVKTKYASFKDWTKYEIKLVQAIKEGNKPLQKQLELENRVKPYDAKQSGRAYRKVATVEYIRRKMKHFFDALICDEVHELKSETAQGTALGSLAKVCKKVVAGTGTLFGGRASDVFYTLWRLFPQKMVKSGFEYSSFMEWNETYGNIERTYYHDGEVTSNIASRGAQGTLDKTKVVPGISPYVFTQFLMDTTINVRLKDVWPNPVELVNVPTILVDMSEEQKQAYEHMKESFEKAIEAAKGTPDAGKLWLSYIRTGNAYPDNMIHYPNYYLDNAGKELVWSNHTFKFDEDCIQPKEKKLQEILHTEISEGRPTIIYVSDTGSTVKERDVQPRLQKVAEQVPGAKVSILRTNTVTPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLATPTLIFYQLSFSLFTLNQAARRHWRIGQTKQCRTFYLGYKETFQAQMAQLIAQKNKAAEAMNGDATSDGLNAMLGDTGDLQTLLIQNIKSGNKLKGSTEEWTKAASDESKRVLANIGNVITPVFESIEIQFTNWVEKLPETIDVAFMKEAQFVRRAAECIKNEQVPGVRVKQNVLEIDGEIEDVIRALTTLNTDKRMLVQKQDITFWDSVIVEVDSSKKKGKRKNKVIDGQFEFDLFG
>NZ_CP010111.1|WP_050822404.1|64271_64985_+|transposase
MFTKIFIGLFCYVFLVVRNSKKKFLMEEAKKKEMENKPVERPVYWCPRENKPIGREQERVTIPTKEITLEKDVASIYDLVATSVHKNLGEEESNRFENEDIEEVEYAESFHHTPTPEVVCDIPFPSDEDIPEELFEYEDMYPQPEYVSIPPETEHVFPVQQGVADVENMDFVRWTAKVIEQEQGLTRVINMSNKKRYWIHTEGEILPKNQLLYMKLEVDSPYSYTLVEWSNRQLGNI
>NZ_CP010111.1|WP_017762474.1|65320_65950_+|hypothetical-protein
MNINSISNNVVEKLEQTVRYEKKQVQVLRVSKSSSNIHAYMIFPEFSEVKISNTELDEYIENLSTSVKYVIDRKLSQQEIEKQNHSFIMTCEVEEDGVIDDETIHFNTTYVKPPTIANKVFKLVCGLGNRLDSLKELHITVLNNNINRIEIEFYNENETYVPVEKEEIANAIMGAYTKANIYYAADLYYAAEGNEIKLKSIKPKLAGDV
>NZ_CP010111.1|WP_017762473.1|65949_66585_+|hypothetical-protein
MKREKGMIGVLCTLVLIILLLVPLQAAQASVKVDFNELKGNDVSSSFKDGLNNRTKTTEKDDSFGSSIIQKIEGLYAPAFKVGVNIFSISFVLGVIVMVMALITKNGQWMKWATGSMIFSFISMMSMRLSVYFLFSSDVFSFMNIFTDFLDLFKATALIFTPFMLIAGIRLRRIHESTKQPEYYRWANRVITGSCLLCMLAVLAPWLFANM
>NZ_CP010111.1|WP_000377388.1|66635_67250_-|hypothetical-protein
MDSITNHIYKKRMLEHTILFSLAQLVPLIISTGIIYILLELTDTEWKTWFSYEGIFAVLFLITRFQVFQNKKSIISLNQYEKWFSKLNIFLISIFLVLFASIPTLLKIAFILQMTIILFLLERICLYIDRLPIHNLYRVKEIVCDKKQLQIERIIPNNEEHGTHTIKTKDGQYFLYTAVYLSGILSPISKEVFEEYERKNLMGR
>NZ_CP010111.1|WP_050822405.1|67233_67818_-|hypothetical-protein
MLKLIVDNTGSEQETDSTFSNFFTCKDCVYYLSKSDSCSLQLAADSNSPLIPYECGNFEETYEIGTEDPLNSHIHQQLREEKAQILAESYPAQPAIDPIHKDAIWYGAVNYGCWIINDSKKRFALAEQVPFGDNNMSSEKYASPFPLHDHGAKEGIRHYMCWYVNEKGIGEYHILVGGVIMKIAEGVKKLGFNN
>NZ_CP010111.1|WP_080989226.1|67943_68327_+|hypothetical-protein
MNRNREYIALRNSILIGWLLTCFVIGLSIYFSSVVYLLIGCFILSLKYGLMGTVKNVEKRLPTWANFGVIEKPVNRRVTRPFQFRGGLLVSLALGFVEMVIKGLCISYFILGLETHVYRLMRRNTRV

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Crispr_ID: NZ_CP010111_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010111_4

72214-72373

TypeI-A

V-U3

Consensus_repeat	Method
AAAACATAACAATAGATGTATTGAAAT	CRISPRCasFinder

2 spacers

c2c10_CAS-V-U3,csa3

The CRISPR arrays of NZ_CP010111_4

>merge|NZ_CP010111|4|72214-72373|CRISPRCasFinder
AAAACATAACAATAGATGTATTGAAATTTTAAAGATTTTTGAACCTTTCCAGGAGTTAAACCCAGTTAAAACATAACAATAGATGTATTGAAATACTTATTAATAAGTCGGTAAGAGCCCTCTATTCAGGTTTTAACAAACTAATAGATGTATTTAAAAA

>NZ_CP010111|4|3|72214-72373|CRISPRCasFinder
AAAACATAACAATAGATGTATTGAAAT	TTTAAAGATTTTTGAACCTTTCCAGGAGTTAAACCCAGTT
AAAACATAACAATAGATGTATTGAAAT	ACTTATTAATAAGTCGGTAAGAGCCCTCTATTCAGGTT
TTAACAAACTAATAGATGTATTTAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010111.1\|WP_050822409.1\|73113_75777_+\|type-IA-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236078
NZ_CP010111.1\|WP_000207868.1\|78769_79063_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP010111.1\|WP_017762473.1\|65949_66585_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822412.1\|77158_77446_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822406.1\|68343_68982_+\|NERD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377990
NZ_CP010111.1\|WP_050822414.1\|78258_78696_+\|disulfide-bond-formation-protein-B	unknown	unknown	gnl\|CDD\|179540
NZ_CP010111.1\|WP_000377388.1\|66635_67250_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822407.1\|69835_70306_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822416.1\|80658_80976_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822417.1\|80972_81350_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822415.1\|79252_80344_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|376220
NZ_CP010111.1\|WP_050822405.1\|67233_67818_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822404.1\|64271_64985_+\|transposase	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822411.1\|76205_76850_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214615
NZ_CP010111.1\|WP_017762474.1\|65320_65950_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_080989227.1\|70586_71948_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c10_CAS-V-U3	-	gnl\|CDD\|284650
NZ_CP010111.1\|WP_080989226.1\|67943_68327_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_102947895.1\|69180_69384_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822413.1\|77469_78225_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_001014125.1\|76882_77083_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP010111.1\|WP_050822409.1\|73113_75777_+\|type-IA-DNA-topoisomerase	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	9.04241e-135
NZ_CP010111.1\|WP_000207868.1\|78769_79063_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.42374e-11
NZ_CP010111.1\|WP_050822411.1\|76205_76850_+\|hypothetical-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	1.54039e-29
NZ_CP010111.1\|WP_080989227.1\|70586_71948_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|284650	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain. This putative domain is found at the C-terminus of a large number of transposase proteins. This domain contains four conserved cysteines suggestive of a zinc binding domain. Given the need for transposases to bind DNA as well as the large number of DNA-binding zinc fingers we hypothesize this domain is DNA-binding.	6.49598e-19
NZ_CP010111.1\|WP_050822414.1\|78258_78696_+\|disulfide-bond-formation-protein-B	gnl\|CDD\|179540	PRK03113, PRK03113, putative disulfide oxidoreductase; Provisional.	2.99785e-37
NZ_CP010111.1\|WP_050822406.1\|68343_68982_+\|NERD-domain-containing-protein	gnl\|CDD\|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	1.05814e-25
NZ_CP010111.1\|WP_050822415.1\|79252_80344_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|376220	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal. Rap proteins consist of a N-terminal 3-helix bundle and a tetratricopeptide domain. This entry represents the conserved region of the C-terminal bundle.	3.00511e-20

>NZ_CP010111.1|WP_080989227.1|70586_71948_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MTYLSIAVKVMKYQIVCPVNIEWKTFEIYLRTLSYHFRTIGNRTIQKLWEYDNQSLKHFKDTGQYPSAQQLYGCTQKTISGYIYDQLKEEYQDINKANMSTTLQKTIRTWNSRKKEIWSGEMSIPSFRNNLPIDIHGNSIQIIKEKSGDYIASVSLFSSKFIKENDLPNGKILVKLSTRKQNSMKVILDRIIDSTYAKGACMLHKHKKKWYLSITYKSNIKEELKFDEDLIMGIDMGKINVLYFAFNKGLVRGAISGEEIEAFRKKIEHRRISLLRQGKYCSGNRIGKGREKRIKPIDVLNDKVAKFRNATNHKYANYIVQQCLKYNCGTIQLEDLKGISKEQTFLKNWTYFDLQEKIKNQANQYGVKVVKIDPSYTSQRCSECEYIHKNNRQDQSTFECQQCSFKVHADYNAAKNISVYNIEKVIQKQLELQEKLNQTKYKEQYIEQMKNIN
>NZ_CP010111.1|WP_050822407.1|69835_70306_-|hypothetical-protein
MISKDLSTVGGTHRYVKKLSVFLIGTLLLFGLAACDSIKLATSNVTVGKVIEEFKAAGLEAEQPSDLPEKEFGNTRKDAKRILVPALGEDSGGRIFEFKNKEDLEQAKKYYDDLGNGNQMLFSHTYAKDNFLLQMNGDMEDVQFNKYKEVMNKVIK
>NZ_CP010111.1|WP_102947895.1|69180_69384_-|hypothetical-protein
MTNLYIQPEFSGYDYERDDYSHHPHYRWKLCIYKNGWTQQYWHRFVPSWQSCPTMTDNELVYQVLIP
>NZ_CP010111.1|WP_050822406.1|68343_68982_+|NERD-domain-containing-protein
MKVLIFELILIAVLIPLNSVVKKHVPKWKGKAGEKLVKRILSKLDPKSYFVLHNVTVYTEYGDTTQIDHIVIAETGVFVVETKNYEGWIYGSEKAARWTQGIFRKKHSFQNPFRQNYKHIKAIEWVMEQQLPCISIAAFHPKCNLKRVHVHSKDKHVLYYNDLQKCIESYTDVQLTNDETQHIYQTISRANITDKGIEKKHVKYLKNKFAKQ
>NZ_CP010111.1|WP_080989226.1|67943_68327_+|hypothetical-protein
MNRNREYIALRNSILIGWLLTCFVIGLSIYFSSVVYLLIGCFILSLKYGLMGTVKNVEKRLPTWANFGVIEKPVNRRVTRPFQFRGGLLVSLALGFVEMVIKGLCISYFILGLETHVYRLMRRNTRV
>NZ_CP010111.1|WP_050822405.1|67233_67818_-|hypothetical-protein
MLKLIVDNTGSEQETDSTFSNFFTCKDCVYYLSKSDSCSLQLAADSNSPLIPYECGNFEETYEIGTEDPLNSHIHQQLREEKAQILAESYPAQPAIDPIHKDAIWYGAVNYGCWIINDSKKRFALAEQVPFGDNNMSSEKYASPFPLHDHGAKEGIRHYMCWYVNEKGIGEYHILVGGVIMKIAEGVKKLGFNN
>NZ_CP010111.1|WP_000377388.1|66635_67250_-|hypothetical-protein
MDSITNHIYKKRMLEHTILFSLAQLVPLIISTGIIYILLELTDTEWKTWFSYEGIFAVLFLITRFQVFQNKKSIISLNQYEKWFSKLNIFLISIFLVLFASIPTLLKIAFILQMTIILFLLERICLYIDRLPIHNLYRVKEIVCDKKQLQIERIIPNNEEHGTHTIKTKDGQYFLYTAVYLSGILSPISKEVFEEYERKNLMGR
>NZ_CP010111.1|WP_017762473.1|65949_66585_+|hypothetical-protein
MKREKGMIGVLCTLVLIILLLVPLQAAQASVKVDFNELKGNDVSSSFKDGLNNRTKTTEKDDSFGSSIIQKIEGLYAPAFKVGVNIFSISFVLGVIVMVMALITKNGQWMKWATGSMIFSFISMMSMRLSVYFLFSSDVFSFMNIFTDFLDLFKATALIFTPFMLIAGIRLRRIHESTKQPEYYRWANRVITGSCLLCMLAVLAPWLFANM
>NZ_CP010111.1|WP_017762474.1|65320_65950_+|hypothetical-protein
MNINSISNNVVEKLEQTVRYEKKQVQVLRVSKSSSNIHAYMIFPEFSEVKISNTELDEYIENLSTSVKYVIDRKLSQQEIEKQNHSFIMTCEVEEDGVIDDETIHFNTTYVKPPTIANKVFKLVCGLGNRLDSLKELHITVLNNNINRIEIEFYNENETYVPVEKEEIANAIMGAYTKANIYYAADLYYAAEGNEIKLKSIKPKLAGDV
>NZ_CP010111.1|WP_050822404.1|64271_64985_+|transposase
MFTKIFIGLFCYVFLVVRNSKKKFLMEEAKKKEMENKPVERPVYWCPRENKPIGREQERVTIPTKEITLEKDVASIYDLVATSVHKNLGEEESNRFENEDIEEVEYAESFHHTPTPEVVCDIPFPSDEDIPEELFEYEDMYPQPEYVSIPPETEHVFPVQQGVADVENMDFVRWTAKVIEQEQGLTRVINMSNKKRYWIHTEGEILPKNQLLYMKLEVDSPYSYTLVEWSNRQLGNI
>NZ_CP010111.1|WP_050822409.1|73113_75777_+|type-IA-DNA-topoisomerase
MGKTLFIAEKPKVANEIMKSPRFRHSQKYIGSKPYYGYYENDHYIVSWCRGHLLELKNPEEMDPKYKVFQLEHLPLIFQPSYKVIQENAEQLQILVKLLQRPDVDHAVNICDADREGELIYREVYEYAGVNKKQSRVYKSSFEAAELEAALNRLESASKYDGLAYSAKARQYLDYLLGMNITRGCTTKLAQNKFLLSSGRVQMCLLHEIRQRELAIENYREQSYYHLQLITDLELKPVMKTEDQVLNPSPLKSLGENLKDQYLTVEEFKEGTRKQNPKLLYNLTDLYKDAHAQLQINAETAKKHIQNLYEEGFITYPRSSSRHLPTEQVDRVKGVMQALAKSRYSLLVQSVDIDAIDINHKTFDDDLVSSHFAIIPTTKQYQEEGRPEIEKQLYSLVVKRFVGNFMRPAVYLVRDVSLIDAMGNTYQIKESVLREKGFLEVFQEEVEEESVETFKVPILQKGQELQIYDFELLESKTKKPALHTESSILTFMETAGRKIDDEHLKELMKGKRIGTVATEAAFIPALLEKNFIDIEKGKIITTPIGRAFIEQFPVQQIKDPLYTAEMEGMIHRIEKNEMSYENFIAQTNAFVQKITQEIIRIPDTVSYNLIETWKQQIEVCQCPCGNGIILDRGKFFGCSNHPNCNTGLPKKIKDKTIPTVQVKKLFEENKTDVIKGFKSNGKEFSAYLAFINGEVSFNLPTVEELSLGQCPKCQNGHILKRDTFFGCSAYQSGCNFAISAKIKEKKLSDSQVKKLLKNRVTDFIHGFKGEYGEFTAAIRLKEDLSICFERPTTDDRTIEKCPLCQGRVIVGKTTYLCEHYKKPCEFIVSGTILKKKITNGQVKKLLEKNMTDTISGFESKKTEEKFDAKLTYDVQKQRIMFITNKKK
>NZ_CP010111.1|WP_050822411.1|76205_76850_+|hypothetical-protein
MKIWIKAICITSFVIQMSACSNSTQTKNDSRPAQAVQNGIQQHVEGKGIVDIPEAYKGKLKGLETVKGKVLHIKDGDTIDVNVKGQRQTVRLLLLDTPESVSQKIPPQKMGKEASSFLKKQLEGKSVTFVYDRGTKEDKYRRKLAYVFCDGIHINELMVKSGYGIIAYISRPNTTLLPEMLEAEKEAKETRAGVWNIKGFVDEKNRHYNRNDAA
>NZ_CP010111.1|WP_001014125.1|76882_77083_+|hypothetical-protein
MNGNKRNMLLSFFISTFFIFLSLLPFSSNEYVYVISKIGAAAGVINIVMMSVFLYFQSKKTRHLLS
>NZ_CP010111.1|WP_050822412.1|77158_77446_+|hypothetical-protein
MSQMPGFLKFVLAKERRYVYLVVAEKKNKRVKTHVVYGFGPLEKALETMYEMRDDFENRFPPDLIDKGYDWEDLNDWILSIETGYSKYGNKLVTF
>NZ_CP010111.1|WP_050822413.1|77469_78225_+|hypothetical-protein
MLNIKSLEQYFHFSNSPGIQYIGTYCTDYSREEYKHVKDFLRKFIDCLSHVEPAYSHETILRFLQDKTYQHKILSDANFQSAFDEQAKDSIIHVLANESEIIETVSTRMKQLITRVRKPMDPDKYVLLDFIQKASTYFVPIDDGHMFDSMTKSGLIGFLLGQEWIFDFGEMDEFEWTPFIHIQFSGYIVPYKELFVYLPKKDFINLKGTDLEKYVSERFLDMANHNTTFEVDFMNMEHRKQIEAYMLEKSV
>NZ_CP010111.1|WP_050822414.1|78258_78696_+|disulfide-bond-formation-protein-B
MELIRKYHIFCAWTIATSAMLISLFFSEWMKLPPCDLCWYQRMAMYPLVLILGIGMYRRDPHVSTYAFPFACIGLILSVYQITIQTFPASEMKICSVGISCTEDYLNLFGFISIPMLSFVGFLAIIVLLYIKPDKETKEQITQRL
>NZ_CP010111.1|WP_000207868.1|78769_79063_+|winged-helix-turn-helix-transcriptional-regulator
MTTIQASNEMHKIPEADVELLKIMAHPVRLQIVKELEHRKICNVTQLTELLDIPQSTVSQHLSKMRGKILRSERRGLEMYYHIVNSKACQIVSVLGL
>NZ_CP010111.1|WP_050822415.1|79252_80344_+|tetratricopeptide-repeat-protein
MNIAIKGNEQILGLLNDWYVEIRARRISNAHRLKEEIDGKIQNINDQNLLLYYSLLDFRHQYVIDNLGVSTSSFDKVESFEIPSNNTLTYYYHFFKAIHASGTGSYKVAKEHFDQAEKLLELINDDVEKAEFYYKLGAFHFDICDSLVSFQYTTKAKEMFLAHADYERNVGFCENLLGLACINLKEWSLAEEHFAAAMDKFQKVGEDKFIIMVRHNLGWMYSKQNLSSLAIRYLSEVIEKSPNHYKAMYAKALEHYKLDERDVAAELIENGLNISKKLNQEEFIHRYLILQELNNASPTQILETVVLAGIDYFEREGLYEDVQESYETLGTKFYDEKNHHAASKYFHLGLKAKRKFFEEGALK
>NZ_CP010111.1|WP_050822416.1|80658_80976_+|hypothetical-protein
MKNHIRSPQGQLLQINKKWSHLKQKQRETISTWLREAYIEKIKVHNRRLKPREHEDVLERVMGKIYDREIWIPDYEVEKYYKGKINKWYNKHISLEEKNEKEENI
>NZ_CP010111.1|WP_050822417.1|80972_81350_+|hypothetical-protein
MKHSIGNVSTSYIIRLILNDLDTFITGGKRQFNFCSESGISPVEKLIADWLEWFNDYPQGISPDELKGIEREIGELMGSMFIWSHHIEKREGYIKQFSDYFGEYIGFYKLVRDVYIEELKDGLSY

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Crispr_ID: NZ_CP010111_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010111_5

72669-72896

TypeI-A

V-U3:NA

Consensus_repeat	Method
GTTAAAACAAAACAATAGATGTATTGAAAT	PILER-CR
AAAACATAACAATAGATGTATTGAAAT	CRISPRCasFinder
AACAATAGATGTATTGAAAT	CRT

3 spacers

c2c10_CAS-V-U3,csa3

The CRISPR arrays of NZ_CP010111_5

>merge|NZ_CP010111|5|72669-72896|PILER-CR,CRISPRCasFinder,CRT
GTTAAAACAAAACAATAGATGTATTGAAATGTTGAAATGTATGAAGAAAGCACCCCTAAACTAAGGTTAAAACATAACAATAGATGTATTGAAATATTCGTTGAATAATAAACTCACCAATAAGCACGGTGAGTTAAAAACATAACAATAGATGTATTGAAATCTAGTAGTTAATTTGAACTGGGTATTTGACAGTGTGTTGAAATAAAACAATAGATGTATTGAAAT

>NZ_CP010111|5|2|72669-72896|PILER-CR
GTTAAAACAAAACAATAGATGTATTGAAAT	GTTGAAATGTATGAAGAAAGCACCCCTAAACTAAG
GTTAAAACATAACAATAGATGTATTGAAAT	ATTCGTTGAATAATAAACTCACCAATAAGCACGGTGAG
TTAAAAACATAACAATAGATGTATTGAAAT	CTAGTAGTTAATTTGAACTGGGTATTTGACAGTGT
GTTGAAATAAAACAATAGATGTATTGAAAT

>NZ_CP010111|5|4|72672-72896|CRISPRCasFinder
AAAACAAAACAATAGATGTATTGAAAT	GTTGAAATGTATGAAGAAAGCACCCCTAAACTAAGGTT
AAAACATAACAATAGATGTATTGAAAT	ATTCGTTGAATAATAAACTCACCAATAAGCACGGTGAGTTA
AAAACATAACAATAGATGTATTGAAAT	CTAGTAGTTAATTTGAACTGGGTATTTGACAGTGTGTT
GAAATAAAACAATAGATGTATTGAAAT

>NZ_CP010111|5|3|72679-72896|CRT
AACAATAGATGTATTGAAAT	GTTGAAATGTATGAAGAAAGCACCCCTAAACTAAGGTTAAAACAT
AACAATAGATGTATTGAAAT	ATTCGTTGAATAATAAACTCACCAATAAGCACGGTGAGTTAAAAACAT
AACAATAGATGTATTGAAAT	CTAGTAGTTAATTTGAACTGGGTATTTGACAGTGTGTTGAAATAA
AACAATAGATGTATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010111.1\|WP_050822409.1\|73113_75777_+\|type-IA-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236078
NZ_CP010111.1\|WP_000207868.1\|78769_79063_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP010111.1\|WP_017762473.1\|65949_66585_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822412.1\|77158_77446_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822406.1\|68343_68982_+\|NERD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377990
NZ_CP010111.1\|WP_050822414.1\|78258_78696_+\|disulfide-bond-formation-protein-B	unknown	unknown	gnl\|CDD\|179540
NZ_CP010111.1\|WP_000377388.1\|66635_67250_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822407.1\|69835_70306_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822416.1\|80658_80976_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822417.1\|80972_81350_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822415.1\|79252_80344_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|376220
NZ_CP010111.1\|WP_050822405.1\|67233_67818_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822404.1\|64271_64985_+\|transposase	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822411.1\|76205_76850_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214615
NZ_CP010111.1\|WP_017762474.1\|65320_65950_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_080989227.1\|70586_71948_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c10_CAS-V-U3	-	gnl\|CDD\|284650
NZ_CP010111.1\|WP_080989226.1\|67943_68327_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_102947895.1\|69180_69384_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_050822413.1\|77469_78225_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010111.1\|WP_001014125.1\|76882_77083_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP010111.1\|WP_050822409.1\|73113_75777_+\|type-IA-DNA-topoisomerase	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	9.04241e-135
NZ_CP010111.1\|WP_000207868.1\|78769_79063_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.42374e-11
NZ_CP010111.1\|WP_050822411.1\|76205_76850_+\|hypothetical-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	1.54039e-29
NZ_CP010111.1\|WP_080989227.1\|70586_71948_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|284650	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain. This putative domain is found at the C-terminus of a large number of transposase proteins. This domain contains four conserved cysteines suggestive of a zinc binding domain. Given the need for transposases to bind DNA as well as the large number of DNA-binding zinc fingers we hypothesize this domain is DNA-binding.	6.49598e-19
NZ_CP010111.1\|WP_050822414.1\|78258_78696_+\|disulfide-bond-formation-protein-B	gnl\|CDD\|179540	PRK03113, PRK03113, putative disulfide oxidoreductase; Provisional.	2.99785e-37
NZ_CP010111.1\|WP_050822406.1\|68343_68982_+\|NERD-domain-containing-protein	gnl\|CDD\|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	1.05814e-25
NZ_CP010111.1\|WP_050822415.1\|79252_80344_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|376220	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal. Rap proteins consist of a N-terminal 3-helix bundle and a tetratricopeptide domain. This entry represents the conserved region of the C-terminal bundle.	3.00511e-20

>NZ_CP010111.1|WP_080989227.1|70586_71948_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MTYLSIAVKVMKYQIVCPVNIEWKTFEIYLRTLSYHFRTIGNRTIQKLWEYDNQSLKHFKDTGQYPSAQQLYGCTQKTISGYIYDQLKEEYQDINKANMSTTLQKTIRTWNSRKKEIWSGEMSIPSFRNNLPIDIHGNSIQIIKEKSGDYIASVSLFSSKFIKENDLPNGKILVKLSTRKQNSMKVILDRIIDSTYAKGACMLHKHKKKWYLSITYKSNIKEELKFDEDLIMGIDMGKINVLYFAFNKGLVRGAISGEEIEAFRKKIEHRRISLLRQGKYCSGNRIGKGREKRIKPIDVLNDKVAKFRNATNHKYANYIVQQCLKYNCGTIQLEDLKGISKEQTFLKNWTYFDLQEKIKNQANQYGVKVVKIDPSYTSQRCSECEYIHKNNRQDQSTFECQQCSFKVHADYNAAKNISVYNIEKVIQKQLELQEKLNQTKYKEQYIEQMKNIN
>NZ_CP010111.1|WP_050822407.1|69835_70306_-|hypothetical-protein
MISKDLSTVGGTHRYVKKLSVFLIGTLLLFGLAACDSIKLATSNVTVGKVIEEFKAAGLEAEQPSDLPEKEFGNTRKDAKRILVPALGEDSGGRIFEFKNKEDLEQAKKYYDDLGNGNQMLFSHTYAKDNFLLQMNGDMEDVQFNKYKEVMNKVIK
>NZ_CP010111.1|WP_102947895.1|69180_69384_-|hypothetical-protein
MTNLYIQPEFSGYDYERDDYSHHPHYRWKLCIYKNGWTQQYWHRFVPSWQSCPTMTDNELVYQVLIP
>NZ_CP010111.1|WP_050822406.1|68343_68982_+|NERD-domain-containing-protein
MKVLIFELILIAVLIPLNSVVKKHVPKWKGKAGEKLVKRILSKLDPKSYFVLHNVTVYTEYGDTTQIDHIVIAETGVFVVETKNYEGWIYGSEKAARWTQGIFRKKHSFQNPFRQNYKHIKAIEWVMEQQLPCISIAAFHPKCNLKRVHVHSKDKHVLYYNDLQKCIESYTDVQLTNDETQHIYQTISRANITDKGIEKKHVKYLKNKFAKQ
>NZ_CP010111.1|WP_080989226.1|67943_68327_+|hypothetical-protein
MNRNREYIALRNSILIGWLLTCFVIGLSIYFSSVVYLLIGCFILSLKYGLMGTVKNVEKRLPTWANFGVIEKPVNRRVTRPFQFRGGLLVSLALGFVEMVIKGLCISYFILGLETHVYRLMRRNTRV
>NZ_CP010111.1|WP_050822405.1|67233_67818_-|hypothetical-protein
MLKLIVDNTGSEQETDSTFSNFFTCKDCVYYLSKSDSCSLQLAADSNSPLIPYECGNFEETYEIGTEDPLNSHIHQQLREEKAQILAESYPAQPAIDPIHKDAIWYGAVNYGCWIINDSKKRFALAEQVPFGDNNMSSEKYASPFPLHDHGAKEGIRHYMCWYVNEKGIGEYHILVGGVIMKIAEGVKKLGFNN
>NZ_CP010111.1|WP_000377388.1|66635_67250_-|hypothetical-protein
MDSITNHIYKKRMLEHTILFSLAQLVPLIISTGIIYILLELTDTEWKTWFSYEGIFAVLFLITRFQVFQNKKSIISLNQYEKWFSKLNIFLISIFLVLFASIPTLLKIAFILQMTIILFLLERICLYIDRLPIHNLYRVKEIVCDKKQLQIERIIPNNEEHGTHTIKTKDGQYFLYTAVYLSGILSPISKEVFEEYERKNLMGR
>NZ_CP010111.1|WP_017762473.1|65949_66585_+|hypothetical-protein
MKREKGMIGVLCTLVLIILLLVPLQAAQASVKVDFNELKGNDVSSSFKDGLNNRTKTTEKDDSFGSSIIQKIEGLYAPAFKVGVNIFSISFVLGVIVMVMALITKNGQWMKWATGSMIFSFISMMSMRLSVYFLFSSDVFSFMNIFTDFLDLFKATALIFTPFMLIAGIRLRRIHESTKQPEYYRWANRVITGSCLLCMLAVLAPWLFANM
>NZ_CP010111.1|WP_017762474.1|65320_65950_+|hypothetical-protein
MNINSISNNVVEKLEQTVRYEKKQVQVLRVSKSSSNIHAYMIFPEFSEVKISNTELDEYIENLSTSVKYVIDRKLSQQEIEKQNHSFIMTCEVEEDGVIDDETIHFNTTYVKPPTIANKVFKLVCGLGNRLDSLKELHITVLNNNINRIEIEFYNENETYVPVEKEEIANAIMGAYTKANIYYAADLYYAAEGNEIKLKSIKPKLAGDV
>NZ_CP010111.1|WP_050822404.1|64271_64985_+|transposase
MFTKIFIGLFCYVFLVVRNSKKKFLMEEAKKKEMENKPVERPVYWCPRENKPIGREQERVTIPTKEITLEKDVASIYDLVATSVHKNLGEEESNRFENEDIEEVEYAESFHHTPTPEVVCDIPFPSDEDIPEELFEYEDMYPQPEYVSIPPETEHVFPVQQGVADVENMDFVRWTAKVIEQEQGLTRVINMSNKKRYWIHTEGEILPKNQLLYMKLEVDSPYSYTLVEWSNRQLGNI
>NZ_CP010111.1|WP_050822409.1|73113_75777_+|type-IA-DNA-topoisomerase
MGKTLFIAEKPKVANEIMKSPRFRHSQKYIGSKPYYGYYENDHYIVSWCRGHLLELKNPEEMDPKYKVFQLEHLPLIFQPSYKVIQENAEQLQILVKLLQRPDVDHAVNICDADREGELIYREVYEYAGVNKKQSRVYKSSFEAAELEAALNRLESASKYDGLAYSAKARQYLDYLLGMNITRGCTTKLAQNKFLLSSGRVQMCLLHEIRQRELAIENYREQSYYHLQLITDLELKPVMKTEDQVLNPSPLKSLGENLKDQYLTVEEFKEGTRKQNPKLLYNLTDLYKDAHAQLQINAETAKKHIQNLYEEGFITYPRSSSRHLPTEQVDRVKGVMQALAKSRYSLLVQSVDIDAIDINHKTFDDDLVSSHFAIIPTTKQYQEEGRPEIEKQLYSLVVKRFVGNFMRPAVYLVRDVSLIDAMGNTYQIKESVLREKGFLEVFQEEVEEESVETFKVPILQKGQELQIYDFELLESKTKKPALHTESSILTFMETAGRKIDDEHLKELMKGKRIGTVATEAAFIPALLEKNFIDIEKGKIITTPIGRAFIEQFPVQQIKDPLYTAEMEGMIHRIEKNEMSYENFIAQTNAFVQKITQEIIRIPDTVSYNLIETWKQQIEVCQCPCGNGIILDRGKFFGCSNHPNCNTGLPKKIKDKTIPTVQVKKLFEENKTDVIKGFKSNGKEFSAYLAFINGEVSFNLPTVEELSLGQCPKCQNGHILKRDTFFGCSAYQSGCNFAISAKIKEKKLSDSQVKKLLKNRVTDFIHGFKGEYGEFTAAIRLKEDLSICFERPTTDDRTIEKCPLCQGRVIVGKTTYLCEHYKKPCEFIVSGTILKKKITNGQVKKLLEKNMTDTISGFESKKTEEKFDAKLTYDVQKQRIMFITNKKK
>NZ_CP010111.1|WP_050822411.1|76205_76850_+|hypothetical-protein
MKIWIKAICITSFVIQMSACSNSTQTKNDSRPAQAVQNGIQQHVEGKGIVDIPEAYKGKLKGLETVKGKVLHIKDGDTIDVNVKGQRQTVRLLLLDTPESVSQKIPPQKMGKEASSFLKKQLEGKSVTFVYDRGTKEDKYRRKLAYVFCDGIHINELMVKSGYGIIAYISRPNTTLLPEMLEAEKEAKETRAGVWNIKGFVDEKNRHYNRNDAA
>NZ_CP010111.1|WP_001014125.1|76882_77083_+|hypothetical-protein
MNGNKRNMLLSFFISTFFIFLSLLPFSSNEYVYVISKIGAAAGVINIVMMSVFLYFQSKKTRHLLS
>NZ_CP010111.1|WP_050822412.1|77158_77446_+|hypothetical-protein
MSQMPGFLKFVLAKERRYVYLVVAEKKNKRVKTHVVYGFGPLEKALETMYEMRDDFENRFPPDLIDKGYDWEDLNDWILSIETGYSKYGNKLVTF
>NZ_CP010111.1|WP_050822413.1|77469_78225_+|hypothetical-protein
MLNIKSLEQYFHFSNSPGIQYIGTYCTDYSREEYKHVKDFLRKFIDCLSHVEPAYSHETILRFLQDKTYQHKILSDANFQSAFDEQAKDSIIHVLANESEIIETVSTRMKQLITRVRKPMDPDKYVLLDFIQKASTYFVPIDDGHMFDSMTKSGLIGFLLGQEWIFDFGEMDEFEWTPFIHIQFSGYIVPYKELFVYLPKKDFINLKGTDLEKYVSERFLDMANHNTTFEVDFMNMEHRKQIEAYMLEKSV
>NZ_CP010111.1|WP_050822414.1|78258_78696_+|disulfide-bond-formation-protein-B
MELIRKYHIFCAWTIATSAMLISLFFSEWMKLPPCDLCWYQRMAMYPLVLILGIGMYRRDPHVSTYAFPFACIGLILSVYQITIQTFPASEMKICSVGISCTEDYLNLFGFISIPMLSFVGFLAIIVLLYIKPDKETKEQITQRL
>NZ_CP010111.1|WP_000207868.1|78769_79063_+|winged-helix-turn-helix-transcriptional-regulator
MTTIQASNEMHKIPEADVELLKIMAHPVRLQIVKELEHRKICNVTQLTELLDIPQSTVSQHLSKMRGKILRSERRGLEMYYHIVNSKACQIVSVLGL
>NZ_CP010111.1|WP_050822415.1|79252_80344_+|tetratricopeptide-repeat-protein
MNIAIKGNEQILGLLNDWYVEIRARRISNAHRLKEEIDGKIQNINDQNLLLYYSLLDFRHQYVIDNLGVSTSSFDKVESFEIPSNNTLTYYYHFFKAIHASGTGSYKVAKEHFDQAEKLLELINDDVEKAEFYYKLGAFHFDICDSLVSFQYTTKAKEMFLAHADYERNVGFCENLLGLACINLKEWSLAEEHFAAAMDKFQKVGEDKFIIMVRHNLGWMYSKQNLSSLAIRYLSEVIEKSPNHYKAMYAKALEHYKLDERDVAAELIENGLNISKKLNQEEFIHRYLILQELNNASPTQILETVVLAGIDYFEREGLYEDVQESYETLGTKFYDEKNHHAASKYFHLGLKAKRKFFEEGALK
>NZ_CP010111.1|WP_050822416.1|80658_80976_+|hypothetical-protein
MKNHIRSPQGQLLQINKKWSHLKQKQRETISTWLREAYIEKIKVHNRRLKPREHEDVLERVMGKIYDREIWIPDYEVEKYYKGKINKWYNKHISLEEKNEKEENI
>NZ_CP010111.1|WP_050822417.1|80972_81350_+|hypothetical-protein
MKHSIGNVSTSYIIRLILNDLDTFITGGKRQFNFCSESGISPVEKLIADWLEWFNDYPQGISPDELKGIEREIGELMGSMFIWSHHIEKREGYIKQFSDYFGEYIGFYKLVRDVYIEELKDGLSY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP010110.1	66670-66702	1	0.97

1. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to position: 66670-66702, mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP010111_1	1.1\|46394\|34\|NZ_CP010111\|CRISPRCasFinder	46394-46427	34	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46394-46427	0	1.0
NZ_CP010111_1	1.2\|46460\|34\|NZ_CP010111\|CRISPRCasFinder	46460-46493	34	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46460-46493	0	1.0
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46526-46558	0	1.0
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46591-46623	0	1.0
NZ_CP010111_1	1.5\|46656\|36\|NZ_CP010111\|CRISPRCasFinder	46656-46691	36	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46656-46691	0	1.0
NZ_CP010111_1	1.6\|46724\|34\|NZ_CP010111\|CRISPRCasFinder	46724-46757	34	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46724-46757	0	1.0
NZ_CP010111_1	1.7\|46394\|46\|NZ_CP010111\|CRT	46394-46439	46	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46394-46439	0	1.0
NZ_CP010111_1	1.8\|46460\|46\|NZ_CP010111\|CRT	46460-46505	46	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46460-46505	0	1.0
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46526-46570	0	1.0
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46591-46635	0	1.0
NZ_CP010111_1	1.11\|46656\|48\|NZ_CP010111\|CRT	46656-46703	48	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46656-46703	0	1.0
NZ_CP010111_1	1.12\|46724\|46\|NZ_CP010111\|CRT	46724-46769	46	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	46724-46769	0	1.0
NZ_CP010111_2	2.1\|53829\|48\|NZ_CP010111\|PILER-CR	53829-53876	48	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	53829-53876	0	1.0
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	53895-53942	0	1.0
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	57648-57689	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP004876	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence	151761-151801	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_017203	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence	183287-183327	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_020384	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence	187512-187552	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP015152	Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence	14578-14618	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP004861	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence	148452-148492	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	57714-57754	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP010091	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence	143213-143253	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	697267-697307	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP013056	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence	16805-16845	0	1.0
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_AP014866	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence	292415-292455	0	1.0
NZ_CP010111_3	3.3\|57779\|42\|NZ_CP010111\|CRISPRCasFinder	57779-57820	42	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	57779-57820	0	1.0
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	57656-57689	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP047087	Bacillus paranthracis strain BC307 plasmid pCE2, complete sequence	65790-65822	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	697267-697299	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_018510	Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence	186508-186540	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP013056	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence	16805-16837	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_AP014866	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence	292415-292447	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	CP041751	Bacillus paranthracis strain NCCP 14796 plasmid unnamed1, complete sequence	5827-5859	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP017573	Bacillus thuringiensis strain SCG04-02 plasmid PSCG61, complete sequence	10722-10754	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP004876	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence	151769-151801	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_017203	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence	183295-183327	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_020384	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence	187520-187552	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP029456	Bacillus cereus strain FORC087 plasmid pFORC087.2, complete sequence	42954-42986	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP015152	Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence	14586-14618	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP013280	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence	80319-80351	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP004861	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence	148460-148492	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	57722-57754	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_011656	Bacillus cereus AH187 plasmid pAH187_45, complete sequence	9678-9710	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP039726	Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence	89365-89397	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_018685	Bacillus thuringiensis MC28 plasmid pMC95, complete sequence	28739-28771	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP009350	Bacillus thuringiensis HD1002 plasmid 4, complete sequence	1706-1738	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP010091	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence	143221-143253	0	1.0
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NZ_CP033793	Bacillus sp. FDAARGOS_527 plasmid unnamed6, complete sequence	7582-7614	0	1.0
NZ_CP010111_3	3.6\|57787\|34\|NZ_CP010111\|CRT	57787-57820	34	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	57787-57820	0	1.0
NZ_CP010111_4	4.1\|72241\|40\|NZ_CP010111\|CRISPRCasFinder	72241-72280	40	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72241-72280	0	1.0
NZ_CP010111_4	4.2\|72308\|38\|NZ_CP010111\|CRISPRCasFinder	72308-72345	38	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72308-72345	0	1.0
NZ_CP010111_5	5.1\|72699\|35\|NZ_CP010111\|PILER-CR	72699-72733	35	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72699-72733	0	1.0
NZ_CP010111_5	5.2\|72764\|38\|NZ_CP010111\|PILER-CR	72764-72801	38	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72764-72801	0	1.0
NZ_CP010111_5	5.3\|72832\|35\|NZ_CP010111\|PILER-CR	72832-72866	35	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72832-72866	0	1.0
NZ_CP010111_5	5.4\|72699\|38\|NZ_CP010111\|CRISPRCasFinder	72699-72736	38	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72699-72736	0	1.0
NZ_CP010111_5	5.5\|72764\|41\|NZ_CP010111\|CRISPRCasFinder	72764-72804	41	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72764-72804	0	1.0
NZ_CP010111_5	5.6\|72832\|38\|NZ_CP010111\|CRISPRCasFinder	72832-72869	38	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72832-72869	0	1.0
NZ_CP010111_5	5.7\|72699\|45\|NZ_CP010111\|CRT	72699-72743	45	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72699-72743	0	1.0
NZ_CP010111_5	5.8\|72764\|48\|NZ_CP010111\|CRT	72764-72811	48	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72764-72811	0	1.0
NZ_CP010111_5	5.9\|72832\|45\|NZ_CP010111\|CRT	72832-72876	45	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	72832-72876	0	1.0
NZ_CP010111_1	1.1\|46394\|34\|NZ_CP010111\|CRISPRCasFinder	46394-46427	34	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	155755-155788	1	0.971
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NC_014937	Bacillus thuringiensis CT43 plasmid pBMB0558, complete sequence	39079-39111	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP004875	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence	16367-16399	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NC_017202	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence	72742-72774	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP010580	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB76, complete sequence	31708-31740	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP011357	Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence	30693-30725	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP015155	Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence	45318-45350	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP013058	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence	58646-58678	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP007614	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence	71415-71447	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP004868	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence	22581-22613	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP010110	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence	66670-66702	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	CP020756	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence	14554-14586	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	CP020756	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence	129896-129928	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NC_020393	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence	50531-50563	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP010092	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB126, complete sequence	56754-56786	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NZ_CP021063	Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence	8298-8330	1	0.97
NZ_CP010111_1	1.3\|46526\|33\|NZ_CP010111\|CRISPRCasFinder	46526-46558	33	NC_020239	Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence	25163-25195	1	0.97
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_KT186230	Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence	12586-12619	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NC_014331	Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, complete sequence	12654-12687	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP022045	Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence	131062-131095	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NC_007322	Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP010578	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence	164219-164252	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP010579	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence	13088-13121	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP010579	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence	79829-79862	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NC_012579	Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence	12829-12862	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP015777	Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP018904	Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP023002	Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence	11703-11736	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP023002	Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence	193467-193500	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_AP019732	Bacillus anthracis strain PCr plasmid PCr-pXO1	6297-6330	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_AP018444	Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP029324	Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence	29601-29634	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NC_012656	Bacillus anthracis str. A0248 plasmid pXO1, complete sequence	12868-12901	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NC_010934	Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence	58383-58416	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP019589	Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP010853	Bacillus anthracis strain A1144 plasmid pXO1, complete sequence	12586-12619	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP007665	Bacillus anthracis str. Vollum plasmid unnamed, complete sequence	7564-7597	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP008847	Bacillus anthracis strain HYU01 plasmid pX01, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP006743	Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_AP014834	Bacillus anthracis strain Shikan-NIID plasmid pXO1	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP029806	Bacillus anthracis strain London_499 plasmid pX01, complete sequence	12586-12619	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP014853	Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence	287974-288007	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NC_001496	Bacillus anthracis virulence plasmid PX01, complete sequence	12470-12503	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NC_017726	Bacillus anthracis str. H9401 plasmid BAP1, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP014177	Bacillus anthracis strain Stendal plasmid pXO1, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009597	Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence	167948-167981	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009901	Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence	165455-165488	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009340	Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence	64393-64426	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009696	Bacillus anthracis strain RA3 plasmid pXO1, complete sequence	2685-2718	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009463	Bacillus anthracis strain SK-102 plasmid pXO1, complete sequence	48698-48731	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009699	Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence	11622-11655	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009592	Bacillus cereus G9241 plasmid pBCX01, complete sequence	130614-130647	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009543	Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence	99158-99191	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP010321	Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence	80695-80728	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009540	Bacillus anthracis str. Sterne plasmid pXO1, complete sequence	162896-162929	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009330	Bacillus anthracis strain K3 plasmid 1, complete sequence	50657-50690	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009324	Bacillus anthracis strain PAK-1 plasmid 1, complete sequence	5783-5816	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009327	Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence	56324-56357	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP001975	Bacillus anthracis str. A16R plasmid pXO1, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009980	Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence	95129-95162	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP001971	Bacillus anthracis str. A16 plasmid pXO1, complete sequence	12604-12637	1	0.971
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP047132	Bacillus anthracis str. BF1 plasmid pXO1, complete sequence	28721-28754	1	0.971
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_017206	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT83, complete sequence	76593-76625	1	0.97
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_020383	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-85, complete sequence	57456-57488	1	0.97
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	CP024689	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-5-125K, complete sequence	14979-15011	1	0.97
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	KU737345	Bacillus phage Juglone, complete genome	35121-35153	2	0.939
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	MN038178	Bacillus phage Beyonphe, complete genome	35333-35365	2	0.939
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	KJ489402	Bacillus phage Riley, complete genome	33492-33524	2	0.939
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	NC_031100	Bacillus phage Phrodo, complete genome	34868-34900	2	0.939
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	KF669647	Bacillus phage BigBertha, complete genome	35879-35911	2	0.939
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	KC571514	Bacillus phage phiBTP1 Contig14 putative major capsid domain protein gene, complete cds	370-402	2	0.939
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	MF765814	Bacillus phage Taffo16, complete genome	34976-35008	2	0.939
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	NC_028887	Bacillus phage AvesoBmore, complete genome	35330-35362	2	0.939
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	NC_022088	Bacillus phage Troll, complete genome	36049-36081	2	0.939
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	KT995479	Bacillus phage BM5, complete genome	117696-117728	2	0.939
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009317	Bacillus cereus 03BB102 plasmid unnamed, complete sequence	127753-127786	2	0.941
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NC_012473	Bacillus cereus 03BB102 plasmid p03BB102_179, complete sequence	9137-9170	2	0.941
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_022882	Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence	134342-134374	2	0.939
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_022782	Bacillus toyonensis BCT-7112 plasmid pBCT77, complete sequence	43135-43167	2	0.939
NZ_CP010111_3	3.5\|57722\|33\|NZ_CP010111\|CRT	57722-57754	33	NC_022877	Bacillus thuringiensis YBT-1518 plasmid pBMB0232, complete sequence	97767-97799	2	0.939
NZ_CP010111_3	3.6\|57787\|34\|NZ_CP010111\|CRT	57787-57820	34	NZ_CP019234	Bacillus thuringiensis strain YGd22-03 plasmid pYGD83, complete sequence	28949-28982	2	0.941
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	CP046513	Bacillus cereus strain JHU plasmid p2, complete sequence	223885-223917	3	0.909
NZ_CP010111_1	1.4\|46591\|33\|NZ_CP010111\|CRISPRCasFinder	46591-46623	33	MN153503	Bacillus phage Chotacabras, complete genome	35654-35686	3	0.909
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NZ_CP004876	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence	152573-152620	3	0.938
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NC_017203	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence	184910-184957	3	0.938
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NC_020384	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence	189135-189182	3	0.938
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	695637-695684	3	0.938
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NZ_CP015152	Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence	16201-16248	3	0.938
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NZ_CP013056	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence	15175-15222	3	0.938
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NZ_CP004861	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence	150075-150122	3	0.938
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NZ_AP014866	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence	290785-290832	3	0.938
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NZ_CP010091	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence	144836-144883	3	0.938
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP010578	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence	152661-152694	3	0.912
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP053930	Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence	62834-62867	3	0.912
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP009299	Bacillus cereus D17 plasmid unnamed, complete sequence	114559-114592	3	0.912
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NC_018492	Bacillus cereus FRI-35 plasmid p01, complete sequence	165784-165817	3	0.912
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP033789	Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence	179970-180003	3	0.912
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	471822-471855	3	0.912
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	5647-5680	3	0.912
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	146654-146687	3	0.912
NZ_CP010111_3	3.4\|57656\|34\|NZ_CP010111\|CRT	57656-57689	34	NZ_CP044980	Bacillus thuringiensis strain BT62 plasmid pBT62B, complete sequence	133597-133630	3	0.912
NZ_CP010111_5	5.2\|72764\|38\|NZ_CP010111\|PILER-CR	72764-72801	38	NZ_CP014487	Bacillus cereus strain FORC021 plasmid unnamed, complete sequence	36585-36622	3	0.921
NZ_CP010111_2	2.1\|53829\|48\|NZ_CP010111\|PILER-CR	53829-53876	48	CP046513	Bacillus cereus strain JHU plasmid p2, complete sequence	216027-216074	4	0.917
NZ_CP010111_5	5.5\|72764\|41\|NZ_CP010111\|CRISPRCasFinder	72764-72804	41	NZ_CP014487	Bacillus cereus strain FORC021 plasmid unnamed, complete sequence	36582-36622	4	0.902
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_011656	Bacillus cereus AH187 plasmid pAH187_45, complete sequence	9670-9710	5	0.878
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_018685	Bacillus thuringiensis MC28 plasmid pMC95, complete sequence	28731-28771	5	0.878
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP033793	Bacillus sp. FDAARGOS_527 plasmid unnamed6, complete sequence	7574-7614	5	0.878
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP010578	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence	164211-164252	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP010579	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence	79821-79862	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP010579	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence	13088-13129	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP023002	Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence	11695-11736	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP023002	Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence	193459-193500	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_AP019732	Bacillus anthracis strain PCr plasmid PCr-pXO1	6289-6330	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP029324	Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence	29593-29634	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP007665	Bacillus anthracis str. Vollum plasmid unnamed, complete sequence	7556-7597	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009340	Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence	64385-64426	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009696	Bacillus anthracis strain RA3 plasmid pXO1, complete sequence	2677-2718	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009463	Bacillus anthracis strain SK-102 plasmid pXO1, complete sequence	48690-48731	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009699	Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence	11614-11655	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009540	Bacillus anthracis str. Sterne plasmid pXO1, complete sequence	162888-162929	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009324	Bacillus anthracis strain PAK-1 plasmid 1, complete sequence	5775-5816	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009980	Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence	95121-95162	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP047132	Bacillus anthracis str. BF1 plasmid pXO1, complete sequence	28713-28754	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_KT186230	Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence	12586-12627	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NC_014331	Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, complete sequence	12654-12695	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP022045	Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence	131062-131103	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NC_007322	Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NC_012579	Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence	12829-12870	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP015777	Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP018904	Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_AP018444	Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NC_012656	Bacillus anthracis str. A0248 plasmid pXO1, complete sequence	12868-12909	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NC_010934	Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence	58383-58424	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP019589	Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP010853	Bacillus anthracis strain A1144 plasmid pXO1, complete sequence	12586-12627	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP008847	Bacillus anthracis strain HYU01 plasmid pX01, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP006743	Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_AP014834	Bacillus anthracis strain Shikan-NIID plasmid pXO1	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP029806	Bacillus anthracis strain London_499 plasmid pX01, complete sequence	12586-12627	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP014853	Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence	287974-288015	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NC_001496	Bacillus anthracis virulence plasmid PX01, complete sequence	12470-12511	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NC_017726	Bacillus anthracis str. H9401 plasmid BAP1, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP014177	Bacillus anthracis strain Stendal plasmid pXO1, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009597	Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence	167948-167989	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009901	Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence	165455-165496	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009592	Bacillus cereus G9241 plasmid pBCX01, complete sequence	130614-130655	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009543	Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence	99158-99199	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP010321	Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence	80695-80736	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009330	Bacillus anthracis strain K3 plasmid 1, complete sequence	50657-50698	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009327	Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence	56324-56365	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP001975	Bacillus anthracis str. A16R plasmid pXO1, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP001971	Bacillus anthracis str. A16 plasmid pXO1, complete sequence	12604-12645	6	0.857
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP017573	Bacillus thuringiensis strain SCG04-02 plasmid PSCG61, complete sequence	10714-10754	6	0.854
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP029456	Bacillus cereus strain FORC087 plasmid pFORC087.2, complete sequence	42946-42986	6	0.854
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP013280	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence	80311-80351	6	0.854
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP039726	Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence	89357-89397	6	0.854
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP009350	Bacillus thuringiensis HD1002 plasmid 4, complete sequence	1698-1738	6	0.854
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NZ_CP047087	Bacillus paranthracis strain BC307 plasmid pCE2, complete sequence	65790-65830	6	0.854
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_018510	Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence	186508-186548	6	0.854
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	CP041751	Bacillus paranthracis strain NCCP 14796 plasmid unnamed1, complete sequence	5827-5867	6	0.854
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	CP024689	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-5-125K, complete sequence	14971-15011	6	0.854
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP009317	Bacillus cereus 03BB102 plasmid unnamed, complete sequence	127745-127786	7	0.833
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NC_012473	Bacillus cereus 03BB102 plasmid p03BB102_179, complete sequence	9137-9178	7	0.833
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_017206	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT83, complete sequence	76593-76633	7	0.829
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_020383	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-85, complete sequence	57456-57496	7	0.829
NZ_CP010111_3	3.3\|57779\|42\|NZ_CP010111\|CRISPRCasFinder	57779-57820	42	NZ_CP019234	Bacillus thuringiensis strain YGd22-03 plasmid pYGD83, complete sequence	28949-28990	7	0.833
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	KU737345	Bacillus phage Juglone, complete genome	35121-35165	8	0.822
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	MN038178	Bacillus phage Beyonphe, complete genome	35333-35377	8	0.822
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	KJ489402	Bacillus phage Riley, complete genome	33492-33536	8	0.822
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	NC_031100	Bacillus phage Phrodo, complete genome	34868-34912	8	0.822
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	KF669647	Bacillus phage BigBertha, complete genome	35879-35923	8	0.822
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	KC571514	Bacillus phage phiBTP1 Contig14 putative major capsid domain protein gene, complete cds	370-414	8	0.822
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	MF765814	Bacillus phage Taffo16, complete genome	34976-35020	8	0.822
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	NC_028887	Bacillus phage AvesoBmore, complete genome	35330-35374	8	0.822
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	NC_022088	Bacillus phage Troll, complete genome	36049-36093	8	0.822
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	KT995479	Bacillus phage BM5, complete genome	117696-117740	8	0.822
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP010578	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence	152653-152694	8	0.81
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	471814-471855	8	0.81
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	146646-146687	8	0.81
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	5647-5688	8	0.81
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_022877	Bacillus thuringiensis YBT-1518 plasmid pBMB0232, complete sequence	97759-97799	8	0.805
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_022882	Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence	134342-134382	8	0.805
NZ_CP010111_3	3.2\|57714\|41\|NZ_CP010111\|CRISPRCasFinder	57714-57754	41	NC_022782	Bacillus toyonensis BCT-7112 plasmid pBCT77, complete sequence	43135-43175	8	0.805
NZ_CP010111_5	5.8\|72764\|48\|NZ_CP010111\|CRT	72764-72811	48	NZ_CP014487	Bacillus cereus strain FORC021 plasmid unnamed, complete sequence	36575-36622	8	0.833
NZ_CP010111_1	1.10\|46591\|45\|NZ_CP010111\|CRT	46591-46635	45	MN153503	Bacillus phage Chotacabras, complete genome	35654-35698	9	0.8
NZ_CP010111_3	3.1\|57648\|42\|NZ_CP010111\|CRISPRCasFinder	57648-57689	42	NZ_CP044980	Bacillus thuringiensis strain BT62 plasmid pBT62B, complete sequence	133589-133630	9	0.786
NZ_CP010111_1	1.7\|46394\|46\|NZ_CP010111\|CRT	46394-46439	46	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	155755-155800	10	0.783
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NC_014937	Bacillus thuringiensis CT43 plasmid pBMB0558, complete sequence	39067-39111	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP010580	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB76, complete sequence	31696-31740	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP013058	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence	58634-58678	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP007614	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence	71403-71447	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	CP020756	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence	14542-14586	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	CP020756	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence	129884-129928	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP004875	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence	16367-16411	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NC_017202	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence	72742-72786	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP011357	Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence	30693-30737	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP015155	Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence	45318-45362	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP004868	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence	22581-22625	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP010110	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence	66670-66714	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NC_020393	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence	50531-50575	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP010092	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB126, complete sequence	56754-56798	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NZ_CP021063	Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence	8298-8342	11	0.756
NZ_CP010111_1	1.9\|46526\|45\|NZ_CP010111\|CRT	46526-46570	45	NC_020239	Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence	25163-25207	11	0.756
NZ_CP010111_2	2.1\|53829\|48\|NZ_CP010111\|PILER-CR	53829-53876	48	NZ_CP019234	Bacillus thuringiensis strain YGd22-03 plasmid pYGD83, complete sequence	35988-36035	11	0.771
NZ_CP010111_1	1.2\|46460\|34\|NZ_CP010111\|CRISPRCasFinder	46460-46493	34	MT375524	Pelagibacter phage Gjalp EXVC02, partial genome	15679-15712	12	0.647
NZ_CP010111_1	1.2\|46460\|34\|NZ_CP010111\|CRISPRCasFinder	46460-46493	34	MT375523	Pelagibacter phage Eyrgjafa EXV, complete genome	5864-5897	12	0.647
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NC_010895	Bacillus thuringiensis serovar tenebrionis plasmid pBMB175, complete sequence	12454-12501	13	0.729
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NC_011654	Bacillus cereus AH187 plasmid pAH187_12, complete sequence	8802-8849	14	0.708
NZ_CP010111_2	2.2\|53895\|48\|NZ_CP010111\|PILER-CR	53895-53942	48	NZ_CP045535	Bacillaceae bacterium C02 plasmid unnamed2, complete sequence	3207-3254	14	0.708

1. spacer 1.1|46394|34|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

tggtatacaaggagtaataagcggaactcatgca	CRISPR spacer
tggtatacaaggagtaataagcggaactcatgca	Protospacer
**********************************

2. spacer 1.2|46460|34|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

cctgagagaaggaaataggtgttgttatgaagtc	CRISPR spacer
cctgagagaaggaaataggtgttgttatgaagtc	Protospacer
**********************************

3. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctttaa	Protospacer
*********************************

4. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgactttattaac	Protospacer
*********************************

5. spacer 1.5|46656|36|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

tggtcatggatattcggcaatgatagggaaagtatt	CRISPR spacer
tggtcatggatattcggcaatgatagggaaagtatt	Protospacer
************************************

6. spacer 1.6|46724|34|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

caatctcttttacccgtacaacggaagcctgaag	CRISPR spacer
caatctcttttacccgtacaacggaagcctgaag	Protospacer
**********************************

7. spacer 1.7|46394|46|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

tggtatacaaggagtaataagcggaactcatgcagtcgcacctcat	CRISPR spacer
tggtatacaaggagtaataagcggaactcatgcagtcgcacctcat	Protospacer
**********************************************

8. spacer 1.8|46460|46|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

cctgagagaaggaaataggtgttgttatgaagtcgtcgcaccttaa	CRISPR spacer
cctgagagaaggaaataggtgttgttatgaagtcgtcgcaccttaa	Protospacer
**********************************************

9. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctttaagtcgcaccttaa	Protospacer
*********************************************

10. spacer 1.10|46591|45|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

atgccaatcggtgtacaagctgactttattaacatggcaccttgt	CRISPR spacer
atgccaatcggtgtacaagctgactttattaacatggcaccttgt	Protospacer
*********************************************

11. spacer 1.11|46656|48|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

tggtcatggatattcggcaatgatagggaaagtattgtcgcacctcat	CRISPR spacer
tggtcatggatattcggcaatgatagggaaagtattgtcgcacctcat	Protospacer
************************************************

12. spacer 1.12|46724|46|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

caatctcttttacccgtacaacggaagcctgaaggtcgcaccttaa	CRISPR spacer
caatctcttttacccgtacaacggaagcctgaaggtcgcaccttaa	Protospacer
**********************************************

13. spacer 2.1|53829|48|NZ_CP010111|PILER-CR matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

tctacaggtactagaacatcgtttagtggttttggtcgcaccttatat	CRISPR spacer
tctacaggtactagaacatcgtttagtggttttggtcgcaccttatat	Protospacer
************************************************

14. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	Protospacer
************************************************

15. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
attgaaatgctagagacgatatcagttattacttagcaaaaa	Protospacer
******************************************

16. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

17. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_017203 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

18. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_020384 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

19. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP015152 (Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

20. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

21. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

22. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010091 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

23. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

24. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP013056 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

25. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_AP014866 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence) position: , mismatch: 0, identity: 1.0

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
attgaaatatggaaatggaacgttcttacggatcaaaagaa	Protospacer
*****************************************

26. spacer 3.3|57779|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

gttgaaattaaagaggatgctatcctaaacagagttcggatt	CRISPR spacer
gttgaaattaaagaggatgctatcctaaacagagttcggatt	Protospacer
******************************************

27. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaaa	Protospacer
**********************************

28. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP047087 (Bacillus paranthracis strain BC307 plasmid pCE2, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

29. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

30. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_018510 (Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

31. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP013056 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

32. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_AP014866 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

33. spacer 3.5|57722|33|NZ_CP010111|CRT matches to CP041751 (Bacillus paranthracis strain NCCP 14796 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

34. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP017573 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG61, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

35. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

36. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_017203 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

37. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_020384 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

38. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP029456 (Bacillus cereus strain FORC087 plasmid pFORC087.2, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

39. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP015152 (Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

40. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP013280 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

41. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

42. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

43. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_011656 (Bacillus cereus AH187 plasmid pAH187_45, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

44. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP039726 (Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

45. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_018685 (Bacillus thuringiensis MC28 plasmid pMC95, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

46. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP009350 (Bacillus thuringiensis HD1002 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

47. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP010091 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

48. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NZ_CP033793 (Bacillus sp. FDAARGOS_527 plasmid unnamed6, complete sequence) position: , mismatch: 0, identity: 1.0

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttacggatcaaaagaa	Protospacer
*********************************

49. spacer 3.6|57787|34|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

taaagaggatgctatcctaaacagagttcggatt	CRISPR spacer
taaagaggatgctatcctaaacagagttcggatt	Protospacer
**********************************

50. spacer 4.1|72241|40|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

tttaaagatttttgaacctttccaggagttaaacccagtt	CRISPR spacer
tttaaagatttttgaacctttccaggagttaaacccagtt	Protospacer
****************************************

51. spacer 4.2|72308|38|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

acttattaataagtcggtaagagccctctattcaggtt	CRISPR spacer
acttattaataagtcggtaagagccctctattcaggtt	Protospacer
**************************************

52. spacer 5.1|72699|35|NZ_CP010111|PILER-CR matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

gttgaaatgtatgaagaaagcacccctaaactaag	CRISPR spacer
gttgaaatgtatgaagaaagcacccctaaactaag	Protospacer
***********************************

53. spacer 5.2|72764|38|NZ_CP010111|PILER-CR matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

attcgttgaataataaactcaccaataagcacggtgag	CRISPR spacer
attcgttgaataataaactcaccaataagcacggtgag	Protospacer
**************************************

54. spacer 5.3|72832|35|NZ_CP010111|PILER-CR matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

ctagtagttaatttgaactgggtatttgacagtgt	CRISPR spacer
ctagtagttaatttgaactgggtatttgacagtgt	Protospacer
***********************************

55. spacer 5.4|72699|38|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

gttgaaatgtatgaagaaagcacccctaaactaaggtt	CRISPR spacer
gttgaaatgtatgaagaaagcacccctaaactaaggtt	Protospacer
**************************************

56. spacer 5.5|72764|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

attcgttgaataataaactcaccaataagcacggtgagtta	CRISPR spacer
attcgttgaataataaactcaccaataagcacggtgagtta	Protospacer
*****************************************

57. spacer 5.6|72832|38|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

ctagtagttaatttgaactgggtatttgacagtgtgtt	CRISPR spacer
ctagtagttaatttgaactgggtatttgacagtgtgtt	Protospacer
**************************************

58. spacer 5.7|72699|45|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

gttgaaatgtatgaagaaagcacccctaaactaaggttaaaacat	CRISPR spacer
gttgaaatgtatgaagaaagcacccctaaactaaggttaaaacat	Protospacer
*********************************************

59. spacer 5.8|72764|48|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

attcgttgaataataaactcaccaataagcacggtgagttaaaaacat	CRISPR spacer
attcgttgaataataaactcaccaataagcacggtgagttaaaaacat	Protospacer
************************************************

60. spacer 5.9|72832|45|NZ_CP010111|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 0, identity: 1.0

ctagtagttaatttgaactgggtatttgacagtgtgttgaaataa	CRISPR spacer
ctagtagttaatttgaactgggtatttgacagtgtgttgaaataa	Protospacer
*********************************************

61. spacer 1.1|46394|34|NZ_CP010111|CRISPRCasFinder matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 1, identity: 0.971

tggtatacaaggagtaataagcggaactcatgca	CRISPR spacer
tggtatacaaggagttataagcggaactcatgca	Protospacer
*************** ******************

62. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NC_014937 (Bacillus thuringiensis CT43 plasmid pBMB0558, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

63. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP004875 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

64. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NC_017202 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

65. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010580 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB76, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

66. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP011357 (Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

67. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP015155 (Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

68. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP013058 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

69. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP007614 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

70. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP004868 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

71. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010110 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

72. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

73. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

74. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NC_020393 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

75. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010092 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB126, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

76. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NZ_CP021063 (Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

77. spacer 1.3|46526|33|NZ_CP010111|CRISPRCasFinder matches to NC_020239 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence) position: , mismatch: 1, identity: 0.97

atagaagggcacttttaacatcgaactctttaa	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa	Protospacer
*****************************.***

78. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_KT186230 (Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

79. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NC_014331 (Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

80. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP022045 (Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

81. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NC_007322 (Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

82. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

83. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP010579 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

84. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP010579 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

85. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NC_012579 (Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

86. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP015777 (Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

87. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP018904 (Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

88. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP023002 (Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

89. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP023002 (Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

90. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_AP019732 (Bacillus anthracis strain PCr plasmid PCr-pXO1) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

91. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_AP018444 (Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

92. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP029324 (Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

93. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NC_012656 (Bacillus anthracis str. A0248 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

94. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NC_010934 (Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

95. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP019589 (Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

96. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP010853 (Bacillus anthracis strain A1144 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

97. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP007665 (Bacillus anthracis str. Vollum plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

98. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP008847 (Bacillus anthracis strain HYU01 plasmid pX01, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

99. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP006743 (Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

100. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_AP014834 (Bacillus anthracis strain Shikan-NIID plasmid pXO1) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

101. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP029806 (Bacillus anthracis strain London_499 plasmid pX01, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

102. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP014853 (Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

103. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NC_001496 (Bacillus anthracis virulence plasmid PX01, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

104. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NC_017726 (Bacillus anthracis str. H9401 plasmid BAP1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

105. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP014177 (Bacillus anthracis strain Stendal plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

106. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009597 (Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

107. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009901 (Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

108. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009340 (Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

109. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009696 (Bacillus anthracis strain RA3 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

110. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009463 (Bacillus anthracis strain SK-102 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

111. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009699 (Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

112. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009592 (Bacillus cereus G9241 plasmid pBCX01, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

113. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009543 (Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

114. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP010321 (Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

115. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009540 (Bacillus anthracis str. Sterne plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

116. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009330 (Bacillus anthracis strain K3 plasmid 1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

117. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009324 (Bacillus anthracis strain PAK-1 plasmid 1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

118. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009327 (Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

119. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP001975 (Bacillus anthracis str. A16R plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

120. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009980 (Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

121. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP001971 (Bacillus anthracis str. A16 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

122. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP047132 (Bacillus anthracis str. BF1 plasmid pXO1, complete sequence) position: , mismatch: 1, identity: 0.971

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattacttagcaaaga	Protospacer
********************************.*

123. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_017206 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT83, complete sequence) position: , mismatch: 1, identity: 0.97

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgtttttacggatcaaaagaa	Protospacer
****************.****************

124. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_020383 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-85, complete sequence) position: , mismatch: 1, identity: 0.97

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgtttttacggatcaaaagaa	Protospacer
****************.****************

125. spacer 3.5|57722|33|NZ_CP010111|CRT matches to CP024689 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-5-125K, complete sequence) position: , mismatch: 1, identity: 0.97

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgttcttatggatcaaaagaa	Protospacer
********************.************

126. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to KU737345 (Bacillus phage Juglone, complete genome) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

127. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to MN038178 (Bacillus phage Beyonphe, complete genome) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

128. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to KJ489402 (Bacillus phage Riley, complete genome) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

129. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to NC_031100 (Bacillus phage Phrodo, complete genome) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

130. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to KF669647 (Bacillus phage BigBertha, complete genome) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

131. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to KC571514 (Bacillus phage phiBTP1 Contig14 putative major capsid domain protein gene, complete cds) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

132. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to MF765814 (Bacillus phage Taffo16, complete genome) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

133. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to NC_028887 (Bacillus phage AvesoBmore, complete genome) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

134. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to NC_022088 (Bacillus phage Troll, complete genome) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

135. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to KT995479 (Bacillus phage BM5, complete genome) position: , mismatch: 2, identity: 0.939

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaac	Protospacer
**************************.*.****

136. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009317 (Bacillus cereus 03BB102 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.941

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatattagttattacttagcaaaga	Protospacer
**************.*****************.*

137. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NC_012473 (Bacillus cereus 03BB102 plasmid p03BB102_179, complete sequence) position: , mismatch: 2, identity: 0.941

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatattagttattacttagcaaaga	Protospacer
**************.*****************.*

138. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_022882 (Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence) position: , mismatch: 2, identity: 0.939

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgatcttatggatcaaaagaa	Protospacer
************** *****.************

139. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_022782 (Bacillus toyonensis BCT-7112 plasmid pBCT77, complete sequence) position: , mismatch: 2, identity: 0.939

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgatcttatggatcaaaagaa	Protospacer
************** *****.************

140. spacer 3.5|57722|33|NZ_CP010111|CRT matches to NC_022877 (Bacillus thuringiensis YBT-1518 plasmid pBMB0232, complete sequence) position: , mismatch: 2, identity: 0.939

atggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
atggaaatggaacgatcttatggatcaaaagaa	Protospacer
************** *****.************

141. spacer 3.6|57787|34|NZ_CP010111|CRT matches to NZ_CP019234 (Bacillus thuringiensis strain YGd22-03 plasmid pYGD83, complete sequence) position: , mismatch: 2, identity: 0.941

taaagaggatgctatcctaaacagagttcggatt	CRISPR spacer
tagagaggatgctatcctaaacagtgttcggatt	Protospacer
**.********************* *********

142. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to CP046513 (Bacillus cereus strain JHU plasmid p2, complete sequence) position: , mismatch: 3, identity: 0.909

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaattggtgtacaagcggactttattaat	Protospacer
********.*********** ***********.

143. spacer 1.4|46591|33|NZ_CP010111|CRISPRCasFinder matches to MN153503 (Bacillus phage Chotacabras, complete genome) position: , mismatch: 3, identity: 0.909

atgccaatcggtgtacaagctgactttattaac	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaat	Protospacer
**************************.*.***.

144. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 3, identity: 0.938

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagtgtcgcacctcttat	Protospacer
********************************* ************..

145. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NC_017203 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence) position: , mismatch: 3, identity: 0.938

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagtgtcgcacctcttat	Protospacer
********************************* ************..

146. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NC_020384 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence) position: , mismatch: 3, identity: 0.938

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagtgtcgcacctcttat	Protospacer
********************************* ************..

147. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 3, identity: 0.938

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagtgtcgcacctcttat	Protospacer
********************************* ************..

148. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NZ_CP015152 (Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence) position: , mismatch: 3, identity: 0.938

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagtgtcgcacctcttat	Protospacer
********************************* ************..

149. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NZ_CP013056 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence) position: , mismatch: 3, identity: 0.938

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagtgtcgcacctcttat	Protospacer
********************************* ************..

150. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 3, identity: 0.938

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagtgtcgcacctcttat	Protospacer
********************************* ************..

151. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NZ_AP014866 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence) position: , mismatch: 3, identity: 0.938

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagtgtcgcacctcttat	Protospacer
********************************* ************..

152. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NZ_CP010091 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence) position: , mismatch: 3, identity: 0.938

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaacccaaaaagttagtgtcgcacctcttat	Protospacer
********************************* ************..

153. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 3, identity: 0.912

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattttttagcaaaga	Protospacer
********************** .********.*

154. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP053930 (Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.912

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgacatcagttatttcttagcaaaac	Protospacer
***********.********** **********

155. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP009299 (Bacillus cereus D17 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.912

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgacatcagttatttcttagcaaaac	Protospacer
***********.********** **********

156. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NC_018492 (Bacillus cereus FRI-35 plasmid p01, complete sequence) position: , mismatch: 3, identity: 0.912

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgacatcagttatttcttagcaaaac	Protospacer
***********.********** **********

157. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP033789 (Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.912

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgacatcagttatttcttagcaaaac	Protospacer
***********.********** **********

158. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 3, identity: 0.912

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatttcagttatttcttagcaaaga	Protospacer
************ ********* *********.*

159. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.912

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttattttttagcaaaga	Protospacer
********************** .********.*

160. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 3, identity: 0.912

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttatttcttagctaaga	Protospacer
********************** ****** **.*

161. spacer 3.4|57656|34|NZ_CP010111|CRT matches to NZ_CP044980 (Bacillus thuringiensis strain BT62 plasmid pBT62B, complete sequence) position: , mismatch: 3, identity: 0.912

gctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
gctagagacgatatcagttatttcttagctaaga	Protospacer
********************** ****** **.*

162. spacer 5.2|72764|38|NZ_CP010111|PILER-CR matches to NZ_CP014487 (Bacillus cereus strain FORC021 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.921

attcgttgaataataaactcaccaataagcacggtgag	CRISPR spacer
attcgttgaatgataaaatcaccaataagcacggtgat	Protospacer
***********.***** *******************

163. spacer 2.1|53829|48|NZ_CP010111|PILER-CR matches to CP046513 (Bacillus cereus strain JHU plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.917

tctacaggtactagaacatcgtttagtggttttggtcgcaccttatat	CRISPR spacer
tctacaggtactagaacatcgtttagtggttttggtcgcacctcttgc	Protospacer
*******************************************. *..

164. spacer 5.5|72764|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP014487 (Bacillus cereus strain FORC021 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.902

attcgttgaataataaactcaccaataagcacggtgagtta	CRISPR spacer
attcgttgaatgataaaatcaccaataagcacggtgattaa	Protospacer
***********.***** ******************* * *

165. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_011656 (Bacillus cereus AH187 plasmid pAH187_45, complete sequence) position: , mismatch: 5, identity: 0.878

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtatttatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  **********************************

166. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_018685 (Bacillus thuringiensis MC28 plasmid pMC95, complete sequence) position: , mismatch: 5, identity: 0.878

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtatttatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  **********************************

167. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP033793 (Bacillus sp. FDAARGOS_527 plasmid unnamed6, complete sequence) position: , mismatch: 5, identity: 0.878

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtatttatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  **********************************

168. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

169. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010579 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

170. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010579 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

171. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP023002 (Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

172. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP023002 (Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

173. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_AP019732 (Bacillus anthracis strain PCr plasmid PCr-pXO1) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

174. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP029324 (Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

175. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP007665 (Bacillus anthracis str. Vollum plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

176. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009340 (Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

177. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009696 (Bacillus anthracis strain RA3 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

178. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009463 (Bacillus anthracis strain SK-102 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

179. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009699 (Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

180. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009540 (Bacillus anthracis str. Sterne plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

181. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009324 (Bacillus anthracis strain PAK-1 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

182. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009980 (Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

183. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP047132 (Bacillus anthracis str. BF1 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

184. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_KT186230 (Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

185. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NC_014331 (Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

186. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP022045 (Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

187. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NC_007322 (Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

188. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NC_012579 (Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

189. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP015777 (Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

190. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP018904 (Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

191. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_AP018444 (Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

192. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NC_012656 (Bacillus anthracis str. A0248 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

193. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NC_010934 (Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

194. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP019589 (Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

195. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010853 (Bacillus anthracis strain A1144 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

196. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP008847 (Bacillus anthracis strain HYU01 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

197. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP006743 (Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

198. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_AP014834 (Bacillus anthracis strain Shikan-NIID plasmid pXO1) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

199. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP029806 (Bacillus anthracis strain London_499 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

200. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP014853 (Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

201. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NC_001496 (Bacillus anthracis virulence plasmid PX01, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

202. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NC_017726 (Bacillus anthracis str. H9401 plasmid BAP1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

203. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP014177 (Bacillus anthracis strain Stendal plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

204. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009597 (Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

205. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009901 (Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

206. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009592 (Bacillus cereus G9241 plasmid pBCX01, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

207. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009543 (Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

208. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010321 (Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

209. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009330 (Bacillus anthracis strain K3 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

210. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009327 (Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

211. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP001975 (Bacillus anthracis str. A16R plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

212. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP001971 (Bacillus anthracis str. A16 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.857

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattacttagcaaaga	Protospacer
*. **  .********************************.*

213. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP017573 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG61, complete sequence) position: , mismatch: 6, identity: 0.854

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  .*********************************

214. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP029456 (Bacillus cereus strain FORC087 plasmid pFORC087.2, complete sequence) position: , mismatch: 6, identity: 0.854

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  .*********************************

215. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP013280 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence) position: , mismatch: 6, identity: 0.854

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  .*********************************

216. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP039726 (Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence) position: , mismatch: 6, identity: 0.854

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  .*********************************

217. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009350 (Bacillus thuringiensis HD1002 plasmid 4, complete sequence) position: , mismatch: 6, identity: 0.854

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  .*********************************

218. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NZ_CP047087 (Bacillus paranthracis strain BC307 plasmid pCE2, complete sequence) position: , mismatch: 6, identity: 0.854

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  .*********************************

219. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_018510 (Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence) position: , mismatch: 6, identity: 0.854

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  .*********************************

220. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to CP041751 (Bacillus paranthracis strain NCCP 14796 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.854

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgttcttacggatcaaaagaa	Protospacer
.*  *  .*********************************

221. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to CP024689 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-5-125K, complete sequence) position: , mismatch: 6, identity: 0.854

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtatttatggaaatggaacgttcttatggatcaaaagaa	Protospacer
.*  *  *********************.************

222. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP009317 (Bacillus cereus 03BB102 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.833

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatattagttattacttagcaaaga	Protospacer
*. **  .**************.*****************.*

223. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NC_012473 (Bacillus cereus 03BB102 plasmid p03BB102_179, complete sequence) position: , mismatch: 7, identity: 0.833

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatattagttattacttagcaaaga	Protospacer
*. **  .**************.*****************.*

224. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_017206 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT83, complete sequence) position: , mismatch: 7, identity: 0.829

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgtttttacggatcaaaagaa	Protospacer
.*  *  .****************.****************

225. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_020383 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-85, complete sequence) position: , mismatch: 7, identity: 0.829

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgtttttacggatcaaaagaa	Protospacer
.*  *  .****************.****************

226. spacer 3.3|57779|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP019234 (Bacillus thuringiensis strain YGd22-03 plasmid pYGD83, complete sequence) position: , mismatch: 7, identity: 0.833

gttgaaat-----taaagaggatgctatcctaaacagagttcggatt	CRISPR spacer
-----aatccttctagagaggatgctatcctaaacagtgttcggatt	Protospacer
     ***     **.********************* *********

227. spacer 1.10|46591|45|NZ_CP010111|CRT matches to KU737345 (Bacillus phage Juglone, complete genome) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

228. spacer 1.10|46591|45|NZ_CP010111|CRT matches to MN038178 (Bacillus phage Beyonphe, complete genome) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

229. spacer 1.10|46591|45|NZ_CP010111|CRT matches to KJ489402 (Bacillus phage Riley, complete genome) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

230. spacer 1.10|46591|45|NZ_CP010111|CRT matches to NC_031100 (Bacillus phage Phrodo, complete genome) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

231. spacer 1.10|46591|45|NZ_CP010111|CRT matches to KF669647 (Bacillus phage BigBertha, complete genome) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

232. spacer 1.10|46591|45|NZ_CP010111|CRT matches to KC571514 (Bacillus phage phiBTP1 Contig14 putative major capsid domain protein gene, complete cds) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

233. spacer 1.10|46591|45|NZ_CP010111|CRT matches to MF765814 (Bacillus phage Taffo16, complete genome) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

234. spacer 1.10|46591|45|NZ_CP010111|CRT matches to NC_028887 (Bacillus phage AvesoBmore, complete genome) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

235. spacer 1.10|46591|45|NZ_CP010111|CRT matches to NC_022088 (Bacillus phage Troll, complete genome) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

236. spacer 1.10|46591|45|NZ_CP010111|CRT matches to KT995479 (Bacillus phage BM5, complete genome) position: , mismatch: 8, identity: 0.822

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaaca----acctattagac	Protospacer
**************************.*.*****    ****  *

237. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 8, identity: 0.81

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattttttagcaaaga	Protospacer
*. **  .********************** .********.*

238. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 8, identity: 0.81

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatttcagttatttcttagcaaaga	Protospacer
*. **  .************ ********* *********.*

239. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 8, identity: 0.81

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttatttcttagctaaga	Protospacer
*. **  .********************** ****** **.*

240. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.81

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
acagattcgctagagacgatatcagttattttttagcaaaga	Protospacer
*. **  .********************** .********.*

241. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_022877 (Bacillus thuringiensis YBT-1518 plasmid pBMB0232, complete sequence) position: , mismatch: 8, identity: 0.805

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgatcttatggatcaaaagaa	Protospacer
.*  *  .************** *****.************

242. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_022882 (Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence) position: , mismatch: 8, identity: 0.805

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgatcttatggatcaaaagaa	Protospacer
.*  *  .************** *****.************

243. spacer 3.2|57714|41|NZ_CP010111|CRISPRCasFinder matches to NC_022782 (Bacillus toyonensis BCT-7112 plasmid pBCT77, complete sequence) position: , mismatch: 8, identity: 0.805

attgaaatatggaaatggaacgttcttacggatcaaaagaa	CRISPR spacer
gtgtattcatggaaatggaacgatcttatggatcaaaagaa	Protospacer
.*  *  .************** *****.************

244. spacer 5.8|72764|48|NZ_CP010111|CRT matches to NZ_CP014487 (Bacillus cereus strain FORC021 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.833

attcgttgaataataaactcaccaataagcacggtgagttaaaaacat-	CRISPR spacer
attcgttgaatgataaaatcaccaataagcacggtga-ttaagtcttta	Protospacer
***********.***** ******************* ****.  . *

245. spacer 1.10|46591|45|NZ_CP010111|CRT matches to MN153503 (Bacillus phage Chotacabras, complete genome) position: , mismatch: 9, identity: 0.8

atgccaatcggtgtacaagctgactttattaacatggcaccttgt----	CRISPR spacer
atgccaatcggtgtacaagctgacttcactaata----acctattagac	Protospacer
**************************.*.***.*    ****  *

246. spacer 3.1|57648|42|NZ_CP010111|CRISPRCasFinder matches to NZ_CP044980 (Bacillus thuringiensis strain BT62 plasmid pBT62B, complete sequence) position: , mismatch: 9, identity: 0.786

attgaaatgctagagacgatatcagttattacttagcaaaaa	CRISPR spacer
ccagattcgctagagacgatatcagttatttcttagctaaga	Protospacer
 . **  .********************** ****** **.*

247. spacer 1.7|46394|46|NZ_CP010111|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 10, identity: 0.783

tggtatacaaggagtaataagcggaactcatgcagtcgcacctcat	CRISPR spacer
tggtatacaaggagttataagcggaactcatgcaagaggtgtcgat	Protospacer
*************** ******************.  *   .. **

248. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NC_014937 (Bacillus thuringiensis CT43 plasmid pBMB0558, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

249. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP010580 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB76, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggaggaaatt	Protospacer
*****************************.***        **..

250. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP013058 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

251. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP007614 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

252. spacer 1.9|46526|45|NZ_CP010111|CRT matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

253. spacer 1.9|46526|45|NZ_CP010111|CRT matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

254. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP004875 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

255. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NC_017202 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

256. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP011357 (Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

257. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP015155 (Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

258. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP004868 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

259. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP010110 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

260. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NC_020393 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

261. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP010092 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB126, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggaggaaatt	Protospacer
*****************************.***        **..

262. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NZ_CP021063 (Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

263. spacer 1.9|46526|45|NZ_CP010111|CRT matches to NC_020239 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence) position: , mismatch: 11, identity: 0.756

atagaagggcacttttaacatcgaactctttaagtcgcaccttaa--------	CRISPR spacer
atagaagggcacttttaacatcgaactctctaa--------ttggggaaaatt	Protospacer
*****************************.***        **..

264. spacer 2.1|53829|48|NZ_CP010111|PILER-CR matches to NZ_CP019234 (Bacillus thuringiensis strain YGd22-03 plasmid pYGD83, complete sequence) position: , mismatch: 11, identity: 0.771

tctacaggtactagaacatcgtttagtggttttggtcgcaccttatat-------	CRISPR spacer
tctacaggtactagaacatcgtttagtggttttg-------tttttgggaaaatg	Protospacer
**********************************       .** *.

265. spacer 1.2|46460|34|NZ_CP010111|CRISPRCasFinder matches to MT375524 (Pelagibacter phage Gjalp EXVC02, partial genome) position: , mismatch: 12, identity: 0.647

cctgagagaaggaaataggtgttgttatgaagtc	CRISPR spacer
aaaagatgaaggaactaggtgttgttattaatga	Protospacer
   ... ******* ************* **

266. spacer 1.2|46460|34|NZ_CP010111|CRISPRCasFinder matches to MT375523 (Pelagibacter phage Eyrgjafa EXV, complete genome) position: , mismatch: 12, identity: 0.647

cctgagagaaggaaataggtgttgttatgaagtc	CRISPR spacer
aaaagatgaaggaactaggtgttgttattaatga	Protospacer
   ... ******* ************* **

267. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NC_010895 (Bacillus thuringiensis serovar tenebrionis plasmid pBMB175, complete sequence) position: , mismatch: 13, identity: 0.729

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaaccccaaaagtaagggaaaagatttaaac	Protospacer
*********************** ****** ****  . . .*.  .*

268. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NC_011654 (Bacillus cereus AH187 plasmid pAH187_12, complete sequence) position: , mismatch: 14, identity: 0.708

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaaccccaaaagtaagggaaaagattaaaat	Protospacer
*********************** ****** ****  . . .*   ..

269. spacer 2.2|53895|48|NZ_CP010111|PILER-CR matches to NZ_CP045535 (Bacillaceae bacterium C02 plasmid unnamed2, complete sequence) position: , mismatch: 14, identity: 0.708

ttttaaagccagccttccaacccaaaaagttagggtcgcacctcttgc	CRISPR spacer
ttttaaagccagccttccaaccccaaaagtaagggaaaagattaaaat	Protospacer
*********************** ****** ****  . . .*   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

64271 : 120471

Bacillus_phage(29.41%)

transposase,integrase

attL 65070:65085|attR 127518:127533

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050822404.1\|64271_64985_+\|transposase	transposase	NA	NA	NA	NA
65070:65085	attL	NA	NA	NA	NA
WP_017762474.1\|65320_65950_+	hypothetical protein	NA	NA	NA	NA
WP_017762473.1\|65949_66585_+	hypothetical protein	NA	NA	NA	NA
WP_000377388.1\|66635_67250_-	hypothetical protein	NA	NA	NA	NA
WP_050822405.1\|67233_67818_-	hypothetical protein	NA	NA	NA	NA
WP_080989226.1\|67943_68327_+	hypothetical protein	NA	NA	NA	NA
WP_050822406.1\|68343_68982_+	NERD domain-containing protein	A0A2R2ZH57	Clostridioides_phage	1.3e-22	36.1
WP_102947895.1\|69180_69384_-	hypothetical protein	NA	NA	NA	NA
WP_050822407.1\|69835_70306_-	hypothetical protein	A0A0K2CZD8	Paenibacillus_phage	1.9e-20	43.4
WP_080989227.1\|70586_71948_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A142F1Q5	Bacillus_phage	2.2e-77	37.4
WP_050822409.1\|73113_75777_+	type IA DNA topoisomerase	A0A1V0SIB2	Klosneuvirus	1.3e-12	20.6
WP_050822411.1\|76205_76850_+	hypothetical protein	NA	NA	NA	NA
WP_001014125.1\|76882_77083_+	hypothetical protein	NA	NA	NA	NA
WP_050822412.1\|77158_77446_+	hypothetical protein	NA	NA	NA	NA
WP_050822413.1\|77469_78225_+	hypothetical protein	NA	NA	NA	NA
WP_050822414.1\|78258_78696_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_000207868.1\|78769_79063_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_050822415.1\|79252_80344_+	tetratricopeptide repeat protein	A0A2H4J8G3	uncultured_Caudovirales_phage	4.6e-89	45.6
WP_050822416.1\|80658_80976_+	hypothetical protein	NA	NA	NA	NA
WP_050822417.1\|80972_81350_+	hypothetical protein	NA	NA	NA	NA
WP_050822418.1\|81476_82097_+	hypothetical protein	NA	NA	NA	NA
WP_050822420.1\|83552_84530_+	hypothetical protein	NA	NA	NA	NA
WP_080989229.1\|84835_85261_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_080989245.1\|85522_86347_-	ATP-binding protein	NA	NA	NA	NA
WP_050822421.1\|87365_88778_+	ATP-binding protein	NA	NA	NA	NA
WP_050822422.1\|88770_89502_+	hypothetical protein	NA	NA	NA	NA
WP_050822531.1\|90019_90352_+	hypothetical protein	NA	NA	NA	NA
WP_050822423.1\|90456_91563_+	tyrosine recombinase XerS	A0A1B1IQT7	uncultured_Mediterranean_phage	5.8e-07	27.1
WP_050822532.1\|91799_92102_-	hypothetical protein	NA	NA	NA	NA
WP_050822424.1\|93065_93443_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_050822425.1\|93501_95361_-	hypothetical protein	NA	NA	NA	NA
WP_050822426.1\|95599_96688_-	inositol-3-phosphate synthase	A0A0H4IPK5	Stenotrophomonas_phage	3.5e-73	42.2
WP_050822427.1\|96715_97348_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_050822428.1\|97341_98304_-	NAD-dependent epimerase/dehydratase family protein	A0A0E3FNQ3	Synechococcus_phage	1.1e-17	28.2
WP_050822429.1\|98325_98904_-	hypothetical protein	NA	NA	NA	NA
WP_050822430.1\|98940_100224_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_050822431.1\|100225_101389_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_050822432.1\|101385_102549_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_050822433.1\|102523_103810_-	hypothetical protein	A0A218MN59	uncultured_virus	1.3e-42	28.8
WP_050822434.1\|103877_104984_-	hypothetical protein	NA	NA	NA	NA
WP_050822435.1\|105140_105938_+	hypothetical protein	NA	NA	NA	NA
WP_050822436.1\|105940_106741_+	hypothetical protein	NA	NA	NA	NA
WP_050822437.1\|106740_107745_+	ATP-binding cassette domain-containing protein	A0A2R8FG22	Brazilian_cedratvirus	2.5e-17	31.8
WP_050822533.1\|108516_108942_-	hypothetical protein	NA	NA	NA	NA
WP_050822438.1\|109153_109747_-	hypothetical protein	NA	NA	NA	NA
WP_050822439.1\|109763_109988_-	hypothetical protein	NA	NA	NA	NA
WP_050822440.1\|111021_111534_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_050822441.1\|111555_111906_-	hypothetical protein	NA	NA	NA	NA
WP_050822442.1\|112137_113181_+\|integrase	tyrosine-type recombinase/integrase	A0A0E3T6D9	Bacillus_phage	3.4e-09	23.1
WP_050822443.1\|113393_113720_+	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	5.3e-09	35.7
WP_050822444.1\|114286_114565_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A1B1P791	Bacillus_phage	1.1e-10	31.1
WP_000920508.1\|114985_116074_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q332I1	Clostridium_botulinum_C_phage	1.0e-141	69.6
WP_000762772.1\|116077_116482_-\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	2.4e-51	68.4
WP_003304273.1\|116798_116993_+	hypothetical protein	NA	NA	NA	NA
WP_050822445.1\|117238_117511_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	3.1e-23	66.7
WP_050822446.1\|118000_118516_-	hypothetical protein	NA	NA	NA	NA
WP_050822447.1\|119205_120471_+	Y-family DNA polymerase	O64031	Bacillus_phage	2.5e-107	48.6
127518:127533	attR	NA	NA	NA	NA

DBSCAN-SWA_2

128067 : 227937

Bacillus_phage(75.0%)

transposase,protease,integrase

attL 129818:129849|attR 186658:186689

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050822456.1\|128067_128748_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_050822457.1\|128990_129374_-	hypothetical protein	A0A0S2MVJ1	Bacillus_phage	9.6e-10	34.2
129818:129849	attL	NA	NA	NA	NA
WP_050822458.1\|132005_132257_-	hypothetical protein	NA	NA	NA	NA
WP_050822534.1\|133113_134196_-	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_050822459.1\|134225_135323_-	endospore germination permease	NA	NA	NA	NA
WP_050822460.1\|135361_136774_-	spore germination protein	NA	NA	NA	NA
WP_050822461.1\|137290_138691_+	helix-turn-helix domain containing protein	NA	NA	NA	NA
WP_050822462.1\|139233_139668_+	hypothetical protein	NA	NA	NA	NA
WP_050822463.1\|139876_140245_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_050822464.1\|141109_141691_-	hypothetical protein	A0A1B1P7T2	Bacillus_phage	1.9e-41	46.5
WP_080989234.1\|142058_142259_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_080989235.1\|142759_146194_-	pesticidal protein	NA	NA	NA	NA
WP_050822466.1\|146955_148386_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_050822467.1\|148530_149010_-	hypothetical protein	NA	NA	NA	NA
WP_145974775.1\|149079_149475_-	hypothetical protein	NA	NA	NA	NA
WP_050822469.1\|149679_150204_-	ABC transporter permease	NA	NA	NA	NA
WP_080989246.1\|151965_155346_-	pesticidal protein	NA	NA	NA	NA
WP_153601960.1\|156767_156902_+	exosporium leader peptide-containing protein	NA	NA	NA	NA
WP_145974777.1\|157083_157272_-	hypothetical protein	NA	NA	NA	NA
WP_050822472.1\|158511_158847_-	ETX/MTX2 family pore-forming toxin	A0A2I7SC07	Paenibacillus_phage	7.5e-19	57.9
WP_050822473.1\|158856_159135_-	hypothetical protein	NA	NA	NA	NA
WP_050822474.1\|159814_160726_-	ETX/MTX2 family pore-forming toxin	NA	NA	NA	NA
WP_050822475.1\|162006_162423_+	hypothetical protein	NA	NA	NA	NA
WP_050822476.1\|163376_166097_-	phosphodiesterase	NA	NA	NA	NA
WP_050822478.1\|173779_174037_+	hypothetical protein	NA	NA	NA	NA
WP_050822479.1\|174681_176337_-	peptidase M4 family protein	NA	NA	NA	NA
WP_050822480.1\|176854_177832_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	S6AND0	Bacillus_phage	2.9e-135	68.4
WP_050822481.1\|178065_179067_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153601961.1\|180836_181010_+	hypothetical protein	NA	NA	NA	NA
WP_050822482.1\|181436_181628_-	hypothetical protein	NA	NA	NA	NA
WP_050822483.1\|181873_182056_-	RNA-binding protein	NA	NA	NA	NA
WP_050822536.1\|182021_182357_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	1.9e-09	55.7
WP_050822484.1\|182566_183685_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	S6AND0	Bacillus_phage	2.2e-171	80.9
WP_080989237.1\|184136_185138_+	hypothetical protein	NA	NA	NA	NA
WP_050822487.1\|188531_189308_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
186658:186689	attR	NA	NA	NA	NA
WP_050822488.1\|189603_190104_+	hypothetical protein	NA	NA	NA	NA
WP_162490181.1\|192925_193216_+	hypothetical protein	NA	NA	NA	NA
WP_050822491.1\|195115_195613_-	hypothetical protein	NA	NA	NA	NA
WP_080989241.1\|196846_200242_+	pesticidal protein	NA	NA	NA	NA
WP_145974778.1\|200941_201223_-	hypothetical protein	NA	NA	NA	NA
WP_050822493.1\|201308_202175_-	hypothetical protein	NA	NA	NA	NA
WP_050822494.1\|202272_202614_-	hypothetical protein	NA	NA	NA	NA
WP_050822495.1\|202829_203951_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_080989247.1\|203968_204370_-	hypothetical protein	NA	NA	NA	NA
WP_050822497.1\|204428_206675_-	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	8.9e-47	29.3
WP_050822498.1\|206859_207855_-	DUF4046 domain-containing protein	NA	NA	NA	NA
WP_050822499.1\|208963_210658_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_050822501.1\|211634_213347_+	hypothetical protein	NA	NA	NA	NA
WP_050822502.1\|214909_215209_-	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_050822503.1\|215205_215589_-	hypothetical protein	NA	NA	NA	NA
WP_033699716.1\|215750_216326_-	hypothetical protein	NA	NA	NA	NA
WP_050822504.1\|216342_218556_-	peptidoglycan DD-metalloendopeptidase family protein	A7KUS1	Bacillus_phage	1.5e-14	38.3
WP_050822505.1\|218552_222557_-	hypothetical protein	NA	NA	NA	NA
WP_000765120.1\|222587_224687_-	DUF87 domain-containing protein	NA	NA	NA	NA
WP_000892003.1\|224689_225604_-	hypothetical protein	NA	NA	NA	NA
WP_001233532.1\|225604_225955_-	PrgI family protein	NA	NA	NA	NA
WP_001216651.1\|226021_226441_-	hypothetical protein	NA	NA	NA	NA
WP_050822506.1\|226557_226743_-	hypothetical protein	NA	NA	NA	NA
WP_050822507.1\|227001_227937_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP010108

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

68 : 49754

Bacillus_phage(90.74%)

portal,integrase,terminase,holin,tail

attL 13231:13247|attR 49803:49819

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050822230.1\|68_1241_+	hypothetical protein	A0A1B1P786	Bacillus_phage	7.6e-82	44.1
WP_158336184.1\|1355_1499_+	hypothetical protein	NA	NA	NA	NA
WP_153601949.1\|1620_1785_+	hypothetical protein	NA	NA	NA	NA
WP_050822231.1\|1802_2237_-	helix-turn-helix transcriptional regulator	A0A1B1P7A0	Bacillus_phage	4.4e-35	56.2
WP_050822232.1\|2427_2628_+	helix-turn-helix transcriptional regulator	A0A1B1P7A4	Bacillus_phage	2.2e-10	57.9
WP_050822233.1\|2788_2977_+	hypothetical protein	NA	NA	NA	NA
WP_050822234.1\|2985_3513_+	Holliday junction resolvase RecU	A0A1B1P798	Bacillus_phage	6.4e-81	79.8
WP_050822235.1\|3524_4037_+	hypothetical protein	A0A1B1P794	Bacillus_phage	2.6e-47	57.6
WP_080989212.1\|4090_4507_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A1B1P791	Bacillus_phage	6.3e-15	71.7
WP_050822236.1\|4534_4909_+	hypothetical protein	A0A1B1P7A1	Bacillus_phage	6.6e-48	74.2
WP_050822237.1\|4926_5739_+	hypothetical protein	A0A1B1P796	Bacillus_phage	1.4e-98	66.3
WP_080989213.1\|5738_5879_+	Fur-regulated basic protein FbpA	A0A1B1P7A8	Bacillus_phage	1.1e-08	69.8
WP_050822238.1\|5879_6344_+	hypothetical protein	A0A1B1P7B7	Bacillus_phage	3.7e-56	68.2
WP_050822239.1\|6481_7108_+	hypothetical protein	A0A288WG53	Bacillus_phage	1.1e-58	57.2
WP_050822240.1\|7147_7402_+	hypothetical protein	A0A1B1P779	Bacillus_phage	2.5e-38	88.0
WP_050822241.1\|7438_7771_+	hypothetical protein	NA	NA	NA	NA
WP_050822242.1\|7798_8047_+	hypothetical protein	A0A2H4JC71	uncultured_Caudovirales_phage	4.4e-40	93.9
WP_050822243.1\|8083_8311_+	hypothetical protein	A0A288WFX6	Bacillus_phage	4.6e-36	98.7
WP_050822244.1\|8330_8561_+	hypothetical protein	A0A0E3TAK6	Staphylococcus_phage	6.7e-19	63.5
WP_050822245.1\|8563_9151_+	HNH endonuclease	A0A1S5SBA6	Streptococcus_phage	2.1e-32	38.1
WP_050822246.1\|9182_9308_+	DUF3983 domain-containing protein	NA	NA	NA	NA
WP_050822247.1\|9333_9615_+	hypothetical protein	A0A1B1P7B9	Bacillus_phage	1.2e-20	57.5
WP_050822248.1\|9826_10333_+	ArpU family transcriptional regulator	A0A1B1P7B2	Bacillus_phage	1.4e-69	83.2
WP_050822249.1\|11254_11488_+	hypothetical protein	H0USW0	Bacillus_phage	5.4e-16	52.5
WP_050822250.1\|11507_12035_+	ParB N-terminal domain-containing protein	A0A1B1P7B5	Bacillus_phage	1.0e-78	80.7
WP_050822251.1\|12047_13079_+	DNA cytosine methyltransferase	A0A1B1P7C6	Bacillus_phage	1.5e-179	85.1
WP_050822252.1\|13230_13464_+	hypothetical protein	A0A1B1P7D4	Bacillus_phage	2.1e-23	74.0
13231:13247	attL	NA	NA	NA	NA
WP_050822288.1\|13596_13737_+	BC1881 family protein	NA	NA	NA	NA
WP_050822253.1\|13750_13984_+	hypothetical protein	NA	NA	NA	NA
WP_050822254.1\|14043_14985_+	hypothetical protein	A0A1B1P7C9	Bacillus_phage	1.3e-103	74.8
WP_050822255.1\|14989_15826_-\|integrase	tyrosine-type recombinase/integrase	A0A1B1P7C7	Bacillus_phage	1.5e-140	88.5
WP_050822256.1\|16077_16278_+	hypothetical protein	NA	NA	NA	NA
WP_050822257.1\|16283_16625_+	hypothetical protein	NA	NA	NA	NA
WP_050822258.1\|16676_18140_+\|terminase	terminase B	A0A1B1P7D5	Bacillus_phage	4.6e-246	84.8
WP_050822259.1\|18156_19683_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	5.7e-215	71.5
WP_050822260.1\|19698_20619_+	hypothetical protein	A0A1B1P7D7	Bacillus_phage	2.5e-72	49.2
WP_050822261.1\|20718_21915_+	hypothetical protein	A0A1B1P7E4	Bacillus_phage	1.6e-156	74.7
WP_050822262.1\|21942_22878_+	hypothetical protein	A0A1B1P7E3	Bacillus_phage	2.1e-143	84.7
WP_050822263.1\|22889_23213_+	hypothetical protein	A0A1B1P7E2	Bacillus_phage	8.6e-28	61.3
WP_050822264.1\|23218_23635_+	DUF3199 family protein	A0A1B1P7D6	Bacillus_phage	2.4e-38	57.2
WP_050822265.1\|23637_24012_+	hypothetical protein	A0A1B1P7D8	Bacillus_phage	6.9e-29	51.6
WP_050822289.1\|24011_24425_+	hypothetical protein	A0A1B1P7D0	Bacillus_phage	3.3e-48	70.1
WP_050822266.1\|24435_24789_+	hypothetical protein	A0A1B1P7D3	Bacillus_phage	2.3e-50	75.0
WP_050822267.1\|24803_25052_+	hypothetical protein	A0A1B1P7E7	Bacillus_phage	3.0e-20	59.8
WP_050822268.1\|25051_25864_+	hypothetical protein	A0A1B1P7D9	Bacillus_phage	3.2e-103	71.1
WP_050822269.1\|25896_26391_+	hypothetical protein	A0A1B1P7E5	Bacillus_phage	9.1e-29	44.1
WP_050822270.1\|26453_26744_+	hypothetical protein	NA	NA	NA	NA
WP_050822271.1\|26783_31814_+\|tail	phage tail tape measure protein	A0A1B1P7S6	Bacillus_phage	0.0e+00	73.5
WP_050822272.1\|31825_33316_+\|tail	phage tail protein	A0A0S2MV63	Bacillus_phage	3.9e-168	58.2
WP_050822273.1\|33312_38307_+	hypothetical protein	A0A0S2MVB4	Bacillus_phage	0.0e+00	55.2
WP_050822274.1\|38318_38699_+	hypothetical protein	A0A0S2MVE0	Bacillus_phage	1.4e-42	72.5
WP_001115042.1\|38734_38974_+	peptidase	A0A1B1P7E0	Bacillus_phage	7.4e-37	100.0
WP_050822275.1\|39016_39247_+\|holin	phage holin	A0A0S2MVE8	Bacillus_phage	2.2e-33	96.1
WP_050822062.1\|39263_39974_+	N-acetylmuramoyl-L-alanine amidase family protein	A0A0S2MVR5	Bacillus_phage	5.0e-89	95.7
WP_050822276.1\|40709_40979_+	helix-turn-helix domain-containing protein	A0A2H4JDR0	uncultured_Caudovirales_phage	7.6e-14	49.4
WP_050822277.1\|40990_41365_-	hypothetical protein	D2XQ01	Bacillus_virus	9.6e-31	55.9
WP_080989214.1\|41406_41715_-	YolD-like family protein	NA	NA	NA	NA
WP_050822279.1\|42449_42758_+	hypothetical protein	NA	NA	NA	NA
WP_050822280.1\|42873_43413_-	hypothetical protein	A0A1B1P777	Bacillus_phage	1.2e-82	85.5
WP_050822281.1\|43428_43668_-	hypothetical protein	A0A1B1P789	Bacillus_phage	2.5e-32	83.5
WP_050822282.1\|43760_44123_-	hypothetical protein	A0A1B1P795	Bacillus_phage	9.5e-52	87.5
WP_050822283.1\|44132_45248_-	ParM/StbA family protein	A0A1B1P792	Bacillus_phage	8.2e-195	93.0
WP_050822284.1\|45388_46357_-\|integrase	site-specific integrase	A0A1B1P793	Bacillus_phage	7.5e-136	74.1
WP_050822290.1\|46446_46998_-	hypothetical protein	A0A1B1P785	Bacillus_phage	2.2e-47	67.4
WP_050822285.1\|47108_47387_-	YccF domain-containing protein	NA	NA	NA	NA
WP_145974771.1\|47544_48669_-	DnaD domain protein	A0A1B1P784	Bacillus_phage	2.5e-90	55.5
WP_000532685.1\|49514_49754_-	hypothetical protein	A0A1B1P790	Bacillus_phage	2.7e-26	78.5
49803:49819	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP010110

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP010109

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

188 : 45920

Bacillus_phage(69.05%)

terminase,holin,head,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000142654.1\|188_458_+	helix-turn-helix transcriptional regulator	B5LPU7	Bacillus_virus	2.4e-28	84.8
WP_000444008.1\|632_1169_+	hypothetical protein	E5DV63	Deep-sea_thermophilic_phage	2.4e-27	44.1
WP_050822291.1\|1739_1988_-	hypothetical protein	NA	NA	NA	NA
WP_000572098.1\|2338_2539_+	hypothetical protein	NA	NA	NA	NA
WP_050822292.1\|2734_3367_+	DUF1071 domain-containing protein	A0A1B1P7F0	Bacillus_phage	2.5e-31	39.4
WP_050822293.1\|3558_3780_+	hypothetical protein	NA	NA	NA	NA
WP_050822294.1\|3780_4638_+	hypothetical protein	A0A218KCJ2	Bacillus_phage	3.2e-37	31.6
WP_050822295.1\|4621_5380_+	ATP-binding protein	U5PVD6	Bacillus_phage	6.3e-37	38.8
WP_050822296.1\|5394_5658_+	hypothetical protein	A0A1B1P8D7	Bacillus_phage	6.1e-16	63.8
WP_002094320.1\|5614_5860_+	hypothetical protein	A0A1B1P7W1	Bacillus_phage	1.4e-30	87.2
WP_050822297.1\|5856_6120_+	hypothetical protein	A0A0S2GLK4	Bacillus_phage	9.7e-22	60.2
WP_001145518.1\|7492_7681_-	hypothetical protein	A0A288WGN0	Bacillus_phage	8.8e-09	64.8
WP_050822298.1\|7793_8423_+	Holliday junction resolvase RecU	A0A2H4J3A4	uncultured_Caudovirales_phage	8.5e-48	59.8
WP_000441085.1\|8561_8948_+	ArpU family transcriptional regulator	A0A1B1P853	Bacillus_phage	4.5e-23	44.8
WP_000218072.1\|9006_9345_-	hypothetical protein	NA	NA	NA	NA
WP_050822307.1\|10413_10767_+	DUF2513 domain-containing protein	A0A1Q1PVT8	Staphylococcus_phage	3.1e-07	29.0
WP_001250601.1\|11173_11365_+	hypothetical protein	NA	NA	NA	NA
WP_000539630.1\|11582_11795_+	hypothetical protein	NA	NA	NA	NA
WP_001018891.1\|12086_12662_+	recombinase family protein	I1ZBD6	Salisaeta_icosahedral_phage	1.4e-28	40.9
WP_074595344.1\|12851_13109_+	hypothetical protein	NA	NA	NA	NA
WP_000265603.1\|13240_13462_-	hypothetical protein	NA	NA	NA	NA
WP_000810413.1\|14043_14802_+	hypothetical protein	D2XPX8	Bacillus_virus	3.9e-55	60.3
WP_000062322.1\|14798_16028_+\|terminase	PBSX family phage terminase large subunit	A0A059T7K2	Staphylococcus_phage	1.2e-146	62.7
WP_000461485.1\|16040_17465_+\|portal	phage portal protein	A0A0S2MVB2	Bacillus_phage	1.5e-257	92.9
WP_002099121.1\|17538_18306_+\|head	phage head protein	A0A0S2MVF0	Bacillus_phage	7.0e-137	94.5
WP_000811675.1\|18380_19112_+	DUF4355 domain-containing protein	A0A0A7AQU8	Bacillus_phage	1.9e-70	62.7
WP_000116909.1\|19229_20075_+	hypothetical protein	A0A0S2MVF8	Bacillus_phage	2.0e-137	87.9
WP_000654244.1\|20118_20430_+	hypothetical protein	A0A0A7AQX9	Bacillus_phage	6.3e-44	89.0
WP_000616218.1\|20426_20771_+\|head,tail	head-tail adaptor protein	A0A0A7AR32	Bacillus_phage	1.1e-57	92.1
WP_000061894.1\|20745_21153_+	HK97 gp10 family phage protein	A0A0A7AQU9	Bacillus_phage	2.5e-64	93.3
WP_000997644.1\|21158_21521_+	hypothetical protein	A0A0S2MV90	Bacillus_phage	1.3e-56	90.8
WP_000729987.1\|21535_22129_+	hypothetical protein	A0A0S2MV81	Bacillus_phage	5.3e-108	98.0
WP_000150395.1\|22175_22604_+	hypothetical protein	A0A0A7AQY2	Bacillus_phage	1.1e-67	94.4
WP_050552134.1\|22708_22915_+	hypothetical protein	A0A0A7AQY2	Bacillus_phage	1.1e-31	95.6
WP_000418556.1\|22915_25855_+\|tail	phage tail tape measure protein	A0A0A7AR36	Bacillus_phage	4.7e-282	80.1
WP_003318990.1\|25867_27340_+	Phage-related protein	A0A0A7AQV1	Bacillus_phage	1.1e-199	68.5
WP_080989217.1\|27336_30027_+	hypothetical protein	H0USX5	Bacillus_phage	3.9e-291	75.2
WP_080989218.1\|29996_31655_+	hypothetical protein	A0A0S2MVB4	Bacillus_phage	2.0e-189	64.2
WP_001000911.1\|31666_32035_+	hypothetical protein	A0A0S2MVE0	Bacillus_phage	1.3e-32	61.5
WP_000373887.1\|32074_32500_+\|holin	phage holin family protein	A0A1B1P787	Bacillus_phage	1.6e-69	95.0
WP_000405788.1\|32499_33435_+	N-acetylmuramoyl-L-alanine amidase	A0A0S2MVR5	Bacillus_phage	5.1e-166	88.4
WP_000957442.1\|33635_33938_-	hypothetical protein	NA	NA	NA	NA
WP_000056021.1\|33963_35334_-	hypothetical protein	NA	NA	NA	NA
WP_001057811.1\|35403_35745_-	YolD-like family protein	NA	NA	NA	NA
WP_025967161.1\|35741_37007_-	Y-family DNA polymerase	O64031	Bacillus_phage	1.9e-107	48.1
WP_000467326.1\|37119_37341_-	helix-turn-helix transcriptional regulator	A0A0S2GLH4	Bacillus_phage	8.4e-27	78.1
WP_000575736.1\|37640_38936_+	cell division protein FtsK	B3RH36	Bacillus_virus	1.8e-108	45.4
WP_080014686.1\|38877_39453_+	hypothetical protein	B3RH37	Bacillus_virus	2.8e-69	64.2
WP_000718642.1\|39472_39961_+	hypothetical protein	A6XML4	Bacillus_virus	6.7e-16	53.8
WP_000914192.1\|40146_40578_+	hypothetical protein	NA	NA	NA	NA
WP_000128983.1\|40670_41258_+	DUF3967 domain-containing protein	A0A1Z1LZN4	Bacillus_phage	3.9e-10	35.4
WP_000064366.1\|41366_41867_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000820697.1\|41929_42868_-	hypothetical protein	V9QKZ6	Oenococcus_phage	7.3e-11	37.6
WP_000210486.1\|43161_43632_+	NUDIX hydrolase	D0R7J3	Paenibacillus_phage	6.2e-19	37.7
WP_000272494.1\|43959_44148_+	DUF4177 domain-containing protein	NA	NA	NA	NA
WP_000359170.1\|44342_44600_-	hypothetical protein	NA	NA	NA	NA
WP_000124665.1\|44722_45097_-	hypothetical protein	NA	NA	NA	NA
WP_001018642.1\|45098_45920_-	ParA family protein	F0PIG8	Enterococcus_phage	4.4e-52	44.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP010106

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP010106_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010106_1

620127-620202

Orphan

Consensus_repeat	Method
ATCATCATCATGGAGGACACAATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010106_1

>merge|NZ_CP010106|1|620127-620202|CRISPRCasFinder
ATCATCATCATGGAGGACACAATCATGGTGGGCACAATCATAACGGTGGACATCATCACCATGGAGGACACAATCA

>NZ_CP010106|1|1|620127-620202|CRISPRCasFinder
ATCATCATCATGGAGGACACAATCA	TGGTGGGCACAATCATAACGGTGGAC
ATCATCACCATGGAGGACACAATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010106.1\|WP_001167962.1\|610923_611745_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP010106.1\|WP_000448444.1\|622661_624059_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129983
NZ_CP010106.1\|WP_033689169.1\|633516_634977_+\|alanine:cation-symporter-family-protein	unknown	unknown	gnl\|CDD\|376500
NZ_CP010106.1\|WP_000743031.1\|618345_619875_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|171510
NZ_CP010106.1\|WP_001248851.1\|615437_617321_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|226921
NZ_CP010106.1\|WP_000401648.1\|632385_633357_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|225213
NZ_CP010106.1\|WP_000095905.1\|612717_613908_+\|glycine-C-acetyltransferase	unknown	unknown	gnl\|CDD\|235893
NZ_CP010106.1\|WP_000892973.1\|617324_618218_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP010106.1\|WP_050821600.1\|626807_628469_+\|alpha,alpha-phosphotrehalase	unknown	unknown	gnl\|CDD\|274115
NZ_CP010106.1\|WP_044584129.1\|625366_626794_+\|PTS-system-trehalose-specific-EIIBC-component	unknown	unknown	gnl\|CDD\|273916
NZ_CP010106.1\|WP_000893342.1\|620926_622630_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NZ_CP010106.1\|WP_000760054.1\|609852_610911_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP010106.1\|WP_000987244.1\|624514_625225_+\|trehalose-operon-repressor	unknown	unknown	gnl\|CDD\|274116
NZ_CP010106.1\|WP_000925232.1\|608851_609856_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP010106.1\|WP_000723129.1\|613952_614918_+\|L-threonine-3-dehydrogenase	unknown	unknown	gnl\|CDD\|187580
NZ_CP010106.1\|WP_050821601.1\|629607_630714_-\|GerAB/ArcD/ProY-family-transporter	unknown	unknown	gnl\|CDD\|281794
NZ_CP010106.1\|WP_030023079.1\|628502_629627_-\|Ger(x)C-family-spore-germination-protein	unknown	unknown	gnl\|CDD\|274338
NZ_CP010106.1\|WP_000139243.1\|630694_632197_-\|spore-germination-protein-GerKA	unknown	unknown	gnl\|CDD\|377020
NZ_CP010106.1\|WP_001189940.1\|614977_615400_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239217
NZ_CP010106.1\|WP_044584127.1\|611772_612504_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312

Protein	Function_ID	Function_description	E-value
NZ_CP010106.1\|WP_001167962.1\|610923_611745_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	4.08785e-133
NZ_CP010106.1\|WP_000448444.1\|622661_624059_-\|amino-acid-permease	gnl\|CDD\|129983	TIGR00905, Arginine/ornithine_antiporter, transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines].	3.44085e-98
NZ_CP010106.1\|WP_033689169.1\|633516_634977_+\|alanine:cation-symporter-family-protein	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	0
NZ_CP010106.1\|WP_000743031.1\|618345_619875_-\|cardiolipin-synthase	gnl\|CDD\|171510	PRK12452, PRK12452, cardiolipin synthase.	0
NZ_CP010106.1\|WP_001248851.1\|615437_617321_-\|VWA-domain-containing-protein	gnl\|CDD\|226921	COG4548, NorD, Nitric oxide reductase activation protein [Inorganic ion transport and metabolism].	3.45592e-98
NZ_CP010106.1\|WP_000401648.1\|632385_633357_+\|phosphotransferase	gnl\|CDD\|225213	COG2334, COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only].	2.22852e-33
NZ_CP010106.1\|WP_000095905.1\|612717_613908_+\|glycine-C-acetyltransferase	gnl\|CDD\|235893	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional.	0
NZ_CP010106.1\|WP_000892973.1\|617324_618218_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	6.34644e-37
NZ_CP010106.1\|WP_050821600.1\|626807_628469_+\|alpha,alpha-phosphotrehalase	gnl\|CDD\|274115	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.	0
NZ_CP010106.1\|WP_044584129.1\|625366_626794_+\|PTS-system-trehalose-specific-EIIBC-component	gnl\|CDD\|273916	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component. This model represents the fused enzyme II B and C components of the trehalose-specific PTS sugar transporter system. Trehalose is converted to trehalose-6-phosphate in the process of translocation into the cell. These transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci and Streptococci which contain their own A domain as a C-terminal fusion. This family is closely related to the sucrose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively). In E. coli, B. subtilis and P. fluorescens the presence of this gene is associated with the presence of trehalase which degrades T6P to glucose and glucose-6-P. Trehalose may also be transported (in Salmonella) via the mannose PTS or galactose permease systems, or (in Sinorhizobium, Thermococcus and Sulfolobus, for instance) by ABC transporters.	0
NZ_CP010106.1\|WP_000893342.1\|620926_622630_+\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.61366e-109
NZ_CP010106.1\|WP_000760054.1\|609852_610911_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.69127e-87
NZ_CP010106.1\|WP_000987244.1\|624514_625225_+\|trehalose-operon-repressor	gnl\|CDD\|274116	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B. subtilis-type. This family consists of repressors of the GntR family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gram-positive lineages and does not include the TreR from E. coli. [Regulatory functions, DNA interactions].	7.33452e-131
NZ_CP010106.1\|WP_000925232.1\|608851_609856_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.73454e-87
NZ_CP010106.1\|WP_000723129.1\|613952_614918_+\|L-threonine-3-dehydrogenase	gnl\|CDD\|187580	cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs. This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP010106.1\|WP_050821601.1\|629607_630714_-\|GerAB/ArcD/ProY-family-transporter	gnl\|CDD\|281794	pfam03845, Spore_permease, Spore germination protein.	4.64993e-40
NZ_CP010106.1\|WP_030023079.1\|628502_629627_-\|Ger(x)C-family-spore-germination-protein	gnl\|CDD\|274338	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family. Members of this protein family are restricted to endospore-forming members of the Firmicutes lineage of bacteria, including the genera Bacillus, Clostridium, Thermoanaerobacter, Carboxydothermus, etc. Members are nearly all predicted lipoproteins and belong to probable transport operons, some of which have been characterized as crucial to germination in response to alanine. Members typically have been gene symbols gerKC, gerAC, gerYC, etc. [Transport and binding proteins, Amino acids, peptides and amines, Cellular processes, Sporulation and germination].	2.65978e-92
NZ_CP010106.1\|WP_000139243.1\|630694_632197_-\|spore-germination-protein-GerKA	gnl\|CDD\|377020	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein.	0
NZ_CP010106.1\|WP_001189940.1\|614977_615400_+\|NUDIX-hydrolase	gnl\|CDD\|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	2.10188e-24
NZ_CP010106.1\|WP_044584127.1\|611772_612504_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.04158e-20

>NZ_CP010106.1|WP_000743031.1|618345_619875_-|cardiolipin-synthase
MKKPIVQLLLIFTIVSIVLFLLNTSYISLYTFVGALWSITIVGISFVIFIENRSPQSTLAWFLVLALLPIIGVLLYAIFGRSRWRRKKHLHRSEEQRKLFREILEGRRLELLLTVPLNERSIHLTEVIQKFGGGPAADKTTTKLLTNGDQTFSEILRAIEQAKHHIHIQYYIYKSDEIGTKVRDALIQKAKDGVIVRFLYDGLGSNTLRRRFLQPMKEAGIEIVEFDPIFSAWLLETVNYRNHRKIVIVDGKIGFTGGLNVGDEYLGRSKKFPVWRDSHLKIEGKALYKLQAIFLEDWLYASSGLNTYSWDQFMNRQYFPGKEISNAEGAVQIVASGPSSDDKSIRNTLLAVMGSAKKSIWIATPYFIPDQETLTLLRLSAIAGIDVRILYPGKSDSIISDQASQSYFTPLLKAGASIYSYKDGFMHAKIVLVDDTIATIGTANMDVRSFELNYEIISVLYESKTVHDIKRDFEEDFKHSTEIKWNSFQKRSIKKRILESFMRLISPLL
>NZ_CP010106.1|WP_000892973.1|617324_618218_-|MoxR-family-ATPase
MLEQFHIHADLKQQLSTIHEKNKQEAGENAHLIGTKIYKASDNSIIEDAITALLLGKNILLKGPTGSGKTVLAETLSSLFQKPMHSINCSVDLDVEGILGYNTLQTKDGASEVSFVNGPLMKAMKNGHFLYIDEINMAKPETLPLLHGALDYRKMITNPFTQEVVYGDDEYRVIAAINEGYVGTSELNEALKNRFVIIEVPYIQGDTLKELLLAESKLNDVATIEKFVAFASDLMPLARDGRVSEEAASIRGIIDACDLGVYIPVMRAIERSIIAKLNDETEQMTVRELAESYFFEG
>NZ_CP010106.1|WP_001248851.1|615437_617321_-|VWA-domain-containing-protein
MRQIFSDKKIDASLFLQMENLMYALLKEDDAYLEYGYKAYYDEIEKKVVISHFWDDRKEEDTVIGLKSEVFLKALGNKHYSDMTLIRSYAIELQESPLKKFLTQLFVLLEDLRVEEIVKNLRPGTKHVFKRRKEMYRNYFGSQNEINRVRNYHGDRLFCLCYLSLTSDKYEMFNNEYFEQIEAILHETFQARNTEDIMYIVEKIRYRLEALLESDMLNNYFGHAPLYLSVLADEKNCRVEDLANDDTQLIDDDENKNKMDESFSTWHRENKNNENENFLRFELESGTKTNMMGDTARESEDGDQALGSVQGTSQKSTQSNFDGADTEEARASHASSQHDGAYGKYNVGASHTFKEARKPNSDEKKDYQAIKSVVNKDVKELKKIIEKTIENKTNANSDKYYGRLRKKFLRIYTEKQPRMFYKKGQESQELDVAFQLLVDCSGSMYNKMEETKKSVVLFHEALKSLKIPHAISGFWEDASSAKPEDKPNVIHEVVNYKNSTLPNVGPEIMQLREEEDNRDGYIIRIVSEKLAKRPEKHKFLLVFTDGEPSALDYQQDGILDTHEAVKLARKSGMEVIGIFIEEGEAKEATYQLMKNIYNHHFLVANHAEDLRLKIKPLLKKLLLKTIE
>NZ_CP010106.1|WP_001189940.1|614977_615400_+|NUDIX-hydrolase
MQRVDVVYALIHDEETDKILMVHNVEQNVWSLPGGAVEKGEILEEALIREVKEETGLTALAGGLVAINEKFFEESGNHALFFTFRANVVKGELIAEDEGEISAIEWVDRTIANERFPYYDGGFESLLEVAIPYKFQPETK
>NZ_CP010106.1|WP_000723129.1|613952_614918_+|L-threonine-3-dehydrogenase
MKKILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPFETLDVTDGQKLHDIAKRNEVDTIIHLAALLSATAEKNPLFAWNLNMGGLVNALEAARELNCKFFTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPGLISYVAPPGGGTTDYAVEIYYEAIKKGAYTSYIAEGTYMDMMYMPDALQAIISLMEADPSKLVHRNAFNITAMSFEPEQIAASIRKHIPTFTMDYAVDSARQTIADSWPNSIDATAAMKEWGFKAEYDLDKMTTDMLAKLKKKLTAELVMN
>NZ_CP010106.1|WP_000095905.1|612717_613908_+|glycine-C-acetyltransferase
MSSKTLAKFLEENLEDLKSKGLYNVIDPLESSNGPIITIGGKEYINLSSNNYLGLATDSRLQEAAIGAIHKYGVGAGAVRTINGTLDLHIKLEETIAKFKHTEAAIAYQSGFNCNMAAISAVMDKNDAILSDELNHASIIDGSRLSKAKIIVYKHSDMEDLRQKAIAAKESGLYNKLMVITDGVFSMDGDVAKLPEIVEIAEELDLMTYVDDAHGSGVLGKGAGTVKHFGLSDKVDFQIGTLSKAIGVIGGYVAGKQNLIDWLKVRSRPFLFSTALTPADAAACMRSIEILMESTELHDRLWENGRYLKQGLKELGFNIGESETPITPCIIGDEVLTQEFSKRLNEEGVYAKSIVFPTVAKGTGRVRNMPTAAHTKEMLDEAILKYEKVGKEMGII
>NZ_CP010106.1|WP_044584127.1|611772_612504_-|class-I-SAM-dependent-methyltransferase
MAFTESDVYNNTAFFEQYMKRRYRENSPNESIEKPIFFQLIGHVRGKQILDLGCGDAKFGAELLEKGCYSYTGIEGSELMYEKAKKQLENKNGTVHFLNLKDYTYPSSTFDLVTSRLALHYIEHLDAIFQNVFQTLKTNGTFTFSVQHPVITSSFESLQTSGKRTSWLVDDYFKLGKRVEPWIDQEVIKYHRTTEDYFTLLQQAGFTITSLKEATPNPTYFQDEEEYKRRLRIPLFLLFSCTK
>NZ_CP010106.1|WP_001167962.1|610923_611745_+|ABC-transporter-ATP-binding-protein
MQKALETKRLTLSYGETIIIDELNLEIPKGEITIFIGSNGCGKSTLLRSLARLLKPTTGDILLDNQAIQSMQTKQIARQMAILPQGPQAPEGLTVLQLVKQGRYPYQTWLKQWSEKDEEMVQKALAATGMTEFAERDVHALSGGQRQRAWIAMTLAQDTDIILLDEPTTYLDMTHQIEVLDLLFELNETEQRTIVMVLHDLNLACRYADNIVAIQDKQIYAQGKPEEVVDEKLVRDVFRMECQISTDPLFGTPLCIPHGRGRRVVKEVAQAMR
>NZ_CP010106.1|WP_000760054.1|609852_610911_+|iron-ABC-transporter-permease
MKKYIPFRIGKGELSFLMYKRACLVLLSLLVVLIGLFFASAGMGDMKIAPYDVWQAITGNGDAMSNMVVNKFRMPRILIAILVGIALAVAGCILQGLVRNPLASPDIIGITGGASVAVVLFLAIFSDKNNALTVSIHYMPLAAFVGATIVALFVYLFAWRNDGLSPISLVLIGVGFWALTKAATTLFMLLAPIYQASQANVWITGTVYGSSWQNVMVLAPWVLILTVISFIAARHLNAQELGDDIAVGLGVPLTKSRVFMLLLSTALIGGAVAFAGGIGFVGLMAPHISRRLVGSLYGALLPVAAIVGAILVLAADLIGRTVFTPLEIPAGVFTSAIGAPYFIYLLYKSRNS
>NZ_CP010106.1|WP_000925232.1|608851_609856_+|iron-ABC-transporter-permease
MLLKTNRAKWIGLFVGIIAVVICIWGSIIFGYTNTSWKLALDAFFHFNGSNEHIIIQNVRLPRALIAASVGASLAIAGCLMQTLTKNPLASPDFIGLNSGAAFFIVVAIVIFSVTSLSAFTWIAFLGAAVAAVLVFASSSLGKEGTTPLKLTLAGVAISALFSSLTQGLLVLNEKALEEVLFWLAGSVQGRKLEILQSVFPYLLIGWIASLMMAGKVNTLMMGEDVAKGLGQRTILMKSFVLLIIVLLSGGSVAVAGPIGFIGIITPHFARFLVGVDHRWRVPYSGLLGAILLILADIAARYVIMPQEVPVGVMTAFIGAPFFIYIARKRGLSK
>NZ_CP010106.1|WP_000893342.1|620926_622630_+|EAL-domain-containing-protein
MLEQRGHALYDSSLRDLKLALDESSIVAITDREGLITYVNDKFCEISKYKREELIGKDHRILNSGHHPKTFFQNLWKRILNGKVWTGEIRNRAKDGTYYWVKTTIVPFLNEKGEPYQFIAIRNDISSRKEAEQRLRLSESRYRELAYHDALTSLPNRLQLITTVNKLIADKKEFGMIYFDLDRFKLVNDTLGHMIGDLLLSEVASRLHYVLGEKDVLARLGGDEFVLLTKNHRQDDMRQLATSVLSCFQAPFILEGHEVYISASLGLCSYPQDGQDVETLLKNSDLAMYSAKEQGRNAACFFTDELRAKINRRMKVEFALQKAIRDEELDVVLQPIIDLKTKRYSGIEALVRCMTEDGPISPNEFIPVAEESGLIIKLGDWVLEKSCRLFKTLPNYQEGLKLSVNLSIQQLMQKRFIFSVRSILKRTGFPPNRLILEITESIAVRHFDYIIATLQELRNMGVLIALDDFGTGYSSLYYLKQLPLDIVKIDRNFIREFHYDHAQPERTIVKSVIEIAHSLNLAVVAEGVETVEQESLLQSMSCDYVQGFYYAKPLSVGELKEKLITDF
>NZ_CP010106.1|WP_000448444.1|622661_624059_-|amino-acid-permease
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMFPSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSINGFSLELGKGLTFLVCSLMLWGIQYILSQNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNRAKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYIMALLALISLFGSTVGWIVVSSEVPYQAAKNGLFPKFFGKTNKKGSPSKSLLITNIMTQIFLFSTISGTVSEAYSFAIVVATLAYLIPYLVSTLYQLKLVITGETYDILPGSRVKDGIITTLALVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKTD
>NZ_CP010106.1|WP_000987244.1|624514_625225_+|trehalose-operon-repressor
MMSKYEQIYTEISKSIDNKQLKEGCKIPSETELMKQYEASRGTVRKAVDLLQERGYVQKIHGKGVFVLKRKNIEFNFGGIVSFQEENERLGRHCITEVVEMDKEKATKEIAKLLNVKEKTEIDHIKRVRNIDGEKVILDINHFVSEFVPGLTKEIATASIYKYIEKELGLHISYSQRVIEVQPCTEDDRKYLDLNGTDYVVVVKNFTHLYDGSQFEYTESRHRLDIFHFSDVARRK
>NZ_CP010106.1|WP_044584129.1|625366_626794_+|PTS-system-trehalose-specific-EIIBC-component
MGKDYRKTAEEVLQYIGGKDNIEQAAHCVTRLRIALKDESKIDNDKLQSVSLVKGAFHNAGIFQVVIGPGDVDRVYAELITLAGMKESTVADVKDSGNQKLNPAQKFVKIFSDVFMPILPAIVTAGLLMGINNLLGAKDLFFDGKNLLDVYPNLGGLWDLINMMANTAFVFLPALVGWSATKRFGGSPILGIVMGLMLVHPALLNAWDYGKAATGLDGQKIEYFDILGLFQIEKVGYQGQILPVLVAAFVLSKVEIFLKKHVPNAIQLLVVPITTIVVTGVLALGIIGPVTRHIGDLLTVGLVGVYETVPVVGAVLFGALYAPLVITGMHHMFIAIDLQLIAQHGGTFIWPMIALSNIAQGSAALAMFWISKNQNDRSMASTSAISAYFGITEPAMFGVNLRNKFPFYAAIIGSAVAAIFITLNGVLAPAIGIGGLPAFISIIPKSIPMFIVGMIIAVVIPFTLTWLFAKRVKQK
>NZ_CP010106.1|WP_050821600.1|626807_628469_+|alpha,alpha-phosphotrehalase
MKDWHKSVVYQIYPKSFNSYYNRETGDIKGVTEKLDYLKELGVDYIWLTPIYQSPQNDNGYDVSDYYSIDPSYGTMEEFEELLAEAKVRNIEIMLDIVVNHSSTEHKWFKEAKEDKNSPYRNYYIWRDEKNNWQSKFGGSAWKYDEKTEQYYLHLFDETQADLNWENEKLREEVYDMMRFWLDKGVTGFRLDVINLISKDQCFLNDEGSTATSDGRKYYTDGPRVHEYLQEMNRNVFAGKDVITVGEMSSTTIDNCIKYSNPERNELSMTFSFHHLKVDYPNGDKWTKAEFDFIKLKKIMSNWQIEMQKGGGWNALFWCNHDQPRIVSRFGDDGKYRNKSAKMLATAMHMLQGTPYIYQGEEIGMTNPKFESIEQYRDVESLNIYDIKLKEGLSKEEIIGILKQKSRDNSRTPMQWNEEMNSGFTTSTPWISAAENFKEINVEKALEDKESVFYYYKKLIELRKTYDVITEGEYAILDKNDPKIWAYTRTTESEVLLVINNFYGEEITYSVPAHVQLDGMKQEVLLSNYKDASKDIAKLNLRPYESIVYRYTK
>NZ_CP010106.1|WP_030023079.1|628502_629627_-|Ger(x)C-family-spore-germination-protein
MFPKRVKLLLILCASSLLSGCWDQEPLREASLAYSVGADITEENKLQQTIELVKSSSGEQSSFENEIYSATGHNIMDTGDALKKNVTGNIRYFKYGVQLLGTKILKKGILPYLDVSFRDPTNPTALVKLIAVDGESSEILEKKKIGNLLIGDFLKKKVKSLEDMSVFPKETLETAATKMLDPGKDFTLPSIKIKGKEVVTNGLALFNNDKLTGHLPLQQSVLFVLLTGKMGTSARITQKLTSDESEKTSDYLTMEISNRKLKRNLKITTDKKGNVYAHIKLQLKVIALESPRDNMYTMDDREKLNKELSKQLTKEAKKITRKLQKANCDAFGIGRHLIAYHPNLWKKKNWNKDYAKVKFKPEVEVSILYSGVLK
>NZ_CP010106.1|WP_050821601.1|629607_630714_-|GerAB/ArcD/ProY-family-transporter
MTNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIILLMWLFLKRFPDADMYKSVCMLFGNKLGKLLGFSYVFYFTLIGMTVMLNACNVIKVWVLHATPWSAILILCTVTCCYVAYNTFKVIVRFYVMASILIIPMALLIALGLSRADFSYIFPITEAGWWNIIQASKETITAMYGFEIILIAFPKVNGSSIAKLKAISIANGFVTLFYTFTVWICFIVFSPKQIELIPEPVAYLLRSLHIGIIDRTDLIFIPIWMITVVASIASYYCAASIGIGHIFNLANHKKAVPIVGIIAFSVALFIDTPEELKVISTFTDKFTYIFIVVLPLLFLLYSIIRKKKGEQYVPKKS
>NZ_CP010106.1|WP_000139243.1|630694_632197_-|spore-germination-protein-GerKA
MTEQKEQQESKKQKHMFPSLPENINYIENKLSHSDDIKKLDLPFQNGKGAILYIESLADPNLIHQLVLEPLLTRSDLSLDKAFSTLNMKKETNLNYGIQLLLQGKSLYFHEHVDSFCIFETTLSLKRDIAEPDNEGVVRGPHTGFVEDLATNLTSIRKLIKSPNLVVKYFTLGEEMHTKVAITYMQNIANDDLVIEVKRRLETIKTDALMPPGYIQEFIEDTSFSPFPQQLNTERPDRTVANLMEGRVAILSDGDPTALIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLPALYIATVAFHPDVLPLELVYTIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSRVGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFLVPSNDMSSAVRILRFPLMLLAAIFGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFIRLPIWSFWERPHDPKPKKMQRQHVTREDEDGDKHAK
>NZ_CP010106.1|WP_000401648.1|632385_633357_+|phosphotransferase
MEIAVERVFTKEILKRAANLFHVTVEEKPLGDFENYIFKAKGDNDEDYVLRLTHSSHRSKQEVEAELDFLRYVAENGAKVAGPLYSTSRNLVEEIVAEDGTFFSASLFTYAKGEQVKGEESPYWGEPLFEAWGKAIGQLHRLTMEYPKTDYRDTWEEDESGIVNELEDGQVKKIAAVLMDEIKALPVERETFGLMHGDIHQGNFHYDGKELTIFDFDDAAYNYFIHDLAMVLYYSVLFTTWTAEEKTDFARKQLQVLRKGYEYEHRLADSWYESLPLFLRLRDIGLYGTLQKKFKGKDMPDNFLKLSEELYERIIKREAIVNI
>NZ_CP010106.1|WP_033689169.1|633516_634977_+|alanine:cation-symporter-family-protein
METFVNWLNNIVWSPALVYLCLGVGLYFSIRTKFLQVRHVGEMVKLTFQGEKSEAGVSSFQALALSLSGRVGTGNIAGVATAVAFGGPGAVFWMWAVAFLGAGSAYVESTLAQIYKTKHQGQFRGGPAYYIEKGLGVKWYALVFVAATILATGLLLPGVQANSIAVSLETAFGINTTVSGAILVVVLALIIFGGVKRIVNVAQVVVPFMAIGYILVACVIVAMNIEKLPEAFMLIIRSAFALEAAFGGIIGLAISWGVKRGIYSNEAGQGTGPHAAAAAEVSHPAKQGLVQAFSVYIDTLFVCSATAFMMIITGMYNVFDASGKNFIVNKLNGAQPGPGYTQAAVESVFPGFGNGFVAISLLFFAFTTIMAYYYIAETNIAYLNRDKDRPWMSMVLKFVFLGAVFYGCIKTAATAWALGDIGVGIMAWVNIIAILLLQKPALVALKDYEKQKKEGKDPVFDPGPLGIKNADFWEHEYGKDKKEEVS

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Crispr_ID: NZ_CP010106_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010106_2

1066448-1066541

Orphan

Consensus_repeat	Method
GGTTTAAATACGTTAAATAGCAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010106_2

>merge|NZ_CP010106|2|1066448-1066541|CRISPRCasFinder
GGTTTAAATACGTTAAATAGCAAAAATGGTATAGAGAAATTACAAGATGGATCTGGGAAAGTAACAGACGGTTTAAATATGTTAAATAGCAAAA

>NZ_CP010106|2|2|1066448-1066541|CRISPRCasFinder
GGTTTAAATACGTTAAATAGCAAAA	ATGGTATAGAGAAATTACAAGATGGATCTGGGAAAGTAACAGAC
GGTTTAAATATGTTAAATAGCAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010106.1\|WP_001055200.1\|1074196_1075729_+\|fatty-acid--CoA-ligase-family-protein	unknown	unknown	gnl\|CDD\|236072
NZ_CP010106.1\|WP_001176844.1\|1060875_1061175_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_050821708.1\|1058376_1060743_+\|endonuclease	unknown	unknown	gnl\|CDD\|225249
NZ_CP010106.1\|WP_001228111.1\|1055299_1056721_+\|protoporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|237009
NZ_CP010106.1\|WP_000140286.1\|1068687_1068993_+\|DUF2087-domain-containing-protein	unknown	unknown	gnl\|CDD\|378279
NZ_CP010106.1\|WP_000984174.1\|1061228_1062074_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_050821707.1\|1053283_1054330_+\|uroporphyrinogen-decarboxylase	unknown	unknown	gnl\|CDD\|234644
NZ_CP010106.1\|WP_000453718.1\|1056782_1058135_-\|DUF4026-domain-containing-protein	unknown	unknown	gnl\|CDD\|338635
NZ_CP010106.1\|WP_001068220.1\|1069019_1069373_-\|PlcR-regulated-protein-PRP2	unknown	unknown	gnl\|CDD\|379617
NZ_CP010106.1\|WP_000567010.1\|1071263_1071392_-\|YhfH-family-protein	unknown	unknown	gnl\|CDD\|379490
NZ_CP010106.1\|WP_000784690.1\|1071572_1072307_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293802
NZ_CP010106.1\|WP_000963378.1\|1064929_1065502_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP010106.1\|WP_000611130.1\|1062707_1064657_+\|M56-family-metallopeptidase	unknown	unknown	gnl\|CDD\|310280
NZ_CP010106.1\|WP_000620019.1\|1069506_1070016_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP010106.1\|WP_000726780.1\|1054344_1055280_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|183526
NZ_CP010106.1\|WP_000103715.1\|1070210_1071224_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP010106.1\|WP_001986098.1\|1068471_1068684_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_000832629.1\|1073606_1074035_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_000184503.1\|1062303_1062705_+\|BlaI/MecI/CopY-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367747
NZ_CP010106.1\|WP_000897280.1\|1072316_1073306_+\|lipoate--protein-ligase	unknown	unknown	gnl\|CDD\|161920

Protein	Function_ID	Function_description	E-value
NZ_CP010106.1\|WP_001055200.1\|1074196_1075729_+\|fatty-acid--CoA-ligase-family-protein	gnl\|CDD\|236072	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP010106.1\|WP_050821708.1\|1058376_1060743_+\|endonuclease	gnl\|CDD\|225249	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only].	8.8435e-71
NZ_CP010106.1\|WP_001228111.1\|1055299_1056721_+\|protoporphyrinogen-oxidase	gnl\|CDD\|237009	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed.	0
NZ_CP010106.1\|WP_000140286.1\|1068687_1068993_+\|DUF2087-domain-containing-protein	gnl\|CDD\|378279	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087). This domain, found in various hypothetical prokaryotic proteins and transcriptional activators, has no known function. Structural modelling suggests this domain may bind nucleic acids.	1.11798e-24
NZ_CP010106.1\|WP_050821707.1\|1053283_1054330_+\|uroporphyrinogen-decarboxylase	gnl\|CDD\|234644	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated.	0
NZ_CP010106.1\|WP_000453718.1\|1056782_1058135_-\|DUF4026-domain-containing-protein	gnl\|CDD\|338635	pfam13218, DUF4026, Protein of unknown function (DUF4026). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 450 amino acids in length. The family is found in association with pfam10077.	9.95419e-175
NZ_CP010106.1\|WP_001068220.1\|1069019_1069373_-\|PlcR-regulated-protein-PRP2	gnl\|CDD\|379617	pfam14470, bPH_3, Bacterial PH domain. Proteins in this family are distantly related to PH domains.	1.67888e-19
NZ_CP010106.1\|WP_000567010.1\|1071263_1071392_-\|YhfH-family-protein	gnl\|CDD\|379490	pfam14149, YhfH, YhfH-like protein. The YhfH-like protein family includes the B. subtilis YhfH protein, which is functionally uncharacterized. Its expression is repressed by the Spx paralogue MgsR, which regulates genes involved in stress response. This family of proteins is found in bacteria. Proteins in this family are typically between 42 and 53 amino acids in length.	3.52581e-13
NZ_CP010106.1\|WP_000784690.1\|1071572_1072307_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293802	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain. The tRNA maturase RNase Z (also known as tRNase Z or 3' tRNase) catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors. Two forms of RNase Z exist in eukaryotes, one long (ELAC2) and one short form (ELAC1), the former may have resulted from a duplication of the shorter enzyme. Only the short form exists in bacteria. Members of this bacterial subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	3.54816e-86
NZ_CP010106.1\|WP_000963378.1\|1064929_1065502_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.25802e-15
NZ_CP010106.1\|WP_000611130.1\|1062707_1064657_+\|M56-family-metallopeptidase	gnl\|CDD\|310280	pfam05569, Peptidase_M56, BlaR1 peptidase M56. Production of beta-Lactamase and penicillin-binding protein 2a (which mediate staphylococcal resistance to beta-lactam antibiotics) is regulated by a signal-transducing integral membrane protein and a transcriptional repressor. The signal transducer is a fusion protein with penicillin-binding and zinc metalloprotease domains. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. homologs to this peptidase domain, which corresponds to Merops family M56, are also found in a number of other bacterial genome sequences.	4.89404e-49
NZ_CP010106.1\|WP_000620019.1\|1069506_1070016_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.24638e-15
NZ_CP010106.1\|WP_000726780.1\|1054344_1055280_+\|ferrochelatase	gnl\|CDD\|183526	PRK12435, PRK12435, ferrochelatase; Provisional.	0
NZ_CP010106.1\|WP_000103715.1\|1070210_1071224_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.56346e-114
NZ_CP010106.1\|WP_000184503.1\|1062303_1062705_+\|BlaI/MecI/CopY-family-transcriptional-regulator	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	6.07643e-46
NZ_CP010106.1\|WP_000897280.1\|1072316_1073306_+\|lipoate--protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	3.20885e-138

>NZ_CP010106.1|WP_000963378.1|1064929_1065502_+|TetR/AcrR-family-transcriptional-regulator
MAIDRKRSIIEAATKSFSAFGYKATTMDQVAKLANVGKGTIYTFFKNKEELFGEIISNLITEMKQVAENAIRSDVSFFENVHRALYSILEFRKEHQLMIKLIQEERDMGTKEVQEVMQQVDVEIVSVIQSYLKIAIEKGEISKCDPEITAFIMLRLYVSLIFDWEKNHEPLEKEKIAELFELYLLKGLSN
>NZ_CP010106.1|WP_000611130.1|1062707_1064657_+|M56-family-metallopeptidase
MINTLINVYLPHFFDWLIETSLMASILVGFILCIKVLFRNKLTPRWQYMLWIVLMIRLLLPWSPDSSYSIYSLLSYSSSVSEVIPKNMPATENIVNIESDRKVELESNSKMVTKTSEPEVKVSSEKQTTFSLYKLALYVWLAGVIILAAITFLTNRRLYSYIKKQPDITDEQVTTVFNRCKQSMKMKKAVSLRLAGKIASPTVFSFFRPKVLLSKKHMKVLNEQQLQYVFYHELAHIKRNDVAVNWIMYSLILLNWFNPILWYAYFCMREDQELACDAYALTFIDKEEQIAYGHTIITLLEHYSYQVPSLANLSRNKRTLKRRIIMIKKFQKKSYRLSLLGVIAIAAIAGGFLLNARITEGDERQKEKVVENKQYKPAFEKAIETVYGTPENASREWGMSIKSYKRDTDFLYLAEKNFTKEEFEQYVQLFKEASEIQKKAMVKKNVPENYDGDTKEYKPERLKKADQERLATIQKKLKPFDDKLQKSLTYTMEEAKEHVPYQIKQPTYIPEGYELKREWADSYFGRDVELVIKSEYTKGKYGFTIYQSRMYMDGNGNGTKDPLHYMMPGVENLESYSLDGKEMVYNKSSHGEGKLRGLKMFVPAQGKNSDYQIVIVNDIFTRDTKIYEEIIDDELTKKEMEKILLSMSK
>NZ_CP010106.1|WP_000184503.1|1062303_1062705_+|BlaI/MecI/CopY-family-transcriptional-regulator
MTNQLPKISEAELEIMKVLWSNSPQTANEIIEELEDAMDWKPKTIRTLINRLVQKEAVSYHQDKGRMYAYYPLVSQDNYLQVETKSLLKRFCGAAFKPLLVNFLKEEKLSSEDINELKRILDEKTEENKRKDR
>NZ_CP010106.1|WP_000984174.1|1061228_1062074_-|hypothetical-protein
MMRALRLNIKQAFCSRISLIMMLSGFVLICIYHYYYVIRYLGNAANGPISTDLKWIGFRDNEMDVYLLLMPVIASFPFSTSYNSDKSDGFKPFVSKGISIFPYSVAKYIVTFFCGGFLYTLPFILSLLFCKLTIPDGTPTVGSGIINADGMFANLYFDAPLTYIAVYIGINFLFAGLMALLGLAASVWSQKDYMAILFPFAAASIPYVLLNTILPSIGGAPFHLYDPKQPLQGMSPYILMTQCAFFLFVSLLMYIQGVKRDRKKYKRRLQKRERCRKAFQV
>NZ_CP010106.1|WP_001176844.1|1060875_1061175_+|hypothetical-protein
MQLQINGKVMNQFAIFFSTIIMLQFVADITGLTSNLDITYNLIHTAASYITFSLAVIFTLIGARRELSKYAIVSLCLVVGIKAIYFVAVVILWGLAGTP
>NZ_CP010106.1|WP_050821708.1|1058376_1060743_+|endonuclease
MAVKKLLSVFLSFLLLLSFTGTLAQAEETASMSVEKAIQVFKQQGKTKGIVEGYIVGYTQSSSKYTKDPAKFDDTNVAIADSPNETNPDKIMPVQLPKGDVRTAVNVKDHPENIGKKVSLTGTLELYFSNPGLKSVTAYKFQGEGQNRVSDVVASPNGGEVAKGTAVTLTTNTEGATIYYTLDGSNPTNKSVRYNGQIIVNENSVVKAIAEKEGLIPSAISTFSFIIVNNEQVRIHDIQGKSHMSPYNGKKVNNVEGVVTALDKNGFYIEDNQPDNDPATSEGMYVYKKDVNVAVGDLIQVDGVVEEYVGPGYAERFETDLTTTEIKASRVAVIAKDQSLPAPIVLGENGVKIPDQIIDNDAFGLFDPNEDAIDFYESIEGMRVTMPTPKIITPQKNGNLYVTVKNGGDKIVTQYGTPLLDENQLNPERLSVKVPRDYVAKVGDTFTGDITGVVGYDYGSFRISPITELPAVVDGGFKQLGANIQPRLDKLTVATYNIENFSANKKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNGSINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVKLATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKVQPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMNDFEFSKPLKTLEGTILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS
>NZ_CP010106.1|WP_000453718.1|1056782_1058135_-|DUF4026-domain-containing-protein
MEVQTETYRAAMNGTLERHFSDMIAVIPTRITIEQLKQRLETIATKVDDLKIVYSDETSLIVELHMGETVIPYELHIDEPNDPEGYKMYNRQDATIVDRNFEDAAFGTEIFTRTLFVGDVLDCFFQQLQFLWNLAPDLLFVIDSSAAMKVISRSYIEYHVENELLPDIPDLYVIHSVYEDDKDGEPTQYWFHTHGLLRAGVTEIELIIPNRISSYYGISDLFQTFANNAVENGQVPMNEPIVIAHSQQGSIHTVAVPWEKGLSYIGHKTSMDQLSSIEDEEVKLQPIDAQNTFLGGMDARDEYHQSPSVLLFKFNTSEEYIESFFKEHEEATGLMFYKTNSETDRMAYNAKNTFGYFSNIFHIEQSNEDFRFLAKFGVSYEEGKSEHMWFEMQNITEDFIQGILINEPYFIEDMSEGNSYHLDFDNLTEWVIYAGDAVIKPNNLYMFIGE
>NZ_CP010106.1|WP_001228111.1|1055299_1056721_+|protoporphyrinogen-oxidase
MRKKVVIVGGGITGLTAMYNLQKNIHEKNLPIDTLLIEASGKLGGKIQTVRKDGFTIERGPDSFLARKESAARLVKELGLGDELVNNQAGQSFILVNNRLHKMPTGSMMGIPTQITPFLFSTLFSPIGKLRAGFDLLMPRSKPVSDQSLGQFFRHRLGNEVVENLIEPLLSGIYAGDIDQMSLMSTFPQMYQIEQEHRSISLGMRMLAPKEEKAEPKKGMFQTVKTGLESIVKSLEVKMHEGTIIKGTRIEKVAKQGDGYTITLSNGKEIEADAIVVATSHKVLPSMFAQYKQFRFFRNIPSTSVANVALAFQKSAIQRDINGTGFVVSRNSDYTITACTWTHKKWPHTTPEGKTLLRCYVGRAGDEAVVEQTEEELVQLVLEDLRKTMDITEDPEFTIVSRWKEAMPQYTVGHNERMKQLTTFMEKELPGIYLAGSSYAGAGLPDCINQGEEAAKRVLSHLEKVIDAELIAQ
>NZ_CP010106.1|WP_000726780.1|1054344_1055280_+|ferrochelatase
MKKKIGLLVMAYGTPYKEEDIERYYTHIRRGRKPSPEMLEDLTERYRAIGGISPLATITLEQAKKLEKRLNEVQDEVEYHMYLGLKHIEPFIEDAVKDMHNDGIQDAIALVLAPHYSTFSVKSYVGRAQEEAEKLGNLTIHGIDSWYKEPKFIQYWVDAVKGIYNGMSDAEREKAVLIVSAHSLPEKIIAMGDPYPDQLNETADYIARGAEVANYAVGWQSAGNTPDPWIGPDVQDLTRELNEKHGYTSFVYTPVGFVAEHLEVLYDNDFECKVVTDEIGAKYYRPEMPNASDAFIDCLTDVVLKKKESVL
>NZ_CP010106.1|WP_050821707.1|1053283_1054330_+|uroporphyrinogen-decarboxylase
MVRTINETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLEEINPEDDVPYILDTIRLLTTEMLDVPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKMGVPMIMHGVGAAHLVNEWHDLPLDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYSKGQLAK
>NZ_CP010106.1|WP_001986098.1|1068471_1068684_+|hypothetical-protein
MMKGNLTYYFIVNPLIIFLVYALSPILFDKEVYTSMKDAFGILTFYYVLMGGYYFIDILSEKIKKKSDGG
>NZ_CP010106.1|WP_000140286.1|1068687_1068993_+|DUF2087-domain-containing-protein
MTESEMKFRDTTIRNFFDKEDRLKSIPGQKKKKLVLLEHLISKLDAGNQYTEKEINTFIKQYHDDFCTIRREFIVHRFMDREDNMYRINGREVWTKWEELK
>NZ_CP010106.1|WP_001068220.1|1069019_1069373_-|PlcR-regulated-protein-PRP2
MNPILTAAKQLLHKEEKILSTLKCSLTGYMITHKVPYPGMLLATNQRLLFFSQYKNTFIAEFDYEKILSIETKRRIFDKKIIFYYEDEYITLGYITSSNVEAFIDLLQRNSKTSTGL
>NZ_CP010106.1|WP_000620019.1|1069506_1070016_+|GNAT-family-N-acetyltransferase
MIRLAKEADAEAIMNIRKEIILSENTTKFFIVSPKKLPNDMNAEREKIRKSNEKGNLYIVYEVDGKVVGFLIFNRYELERLQHAGTMGMGIKEAYCNQGIGTKLIEFLISWAKGQKGLEKICLGVVSVNDRAIKVYKRMGFVEEGRQRKQIKYEDGSYGDDVLMGFYIK
>NZ_CP010106.1|WP_000103715.1|1070210_1071224_+|LacI-family-DNA-binding-transcriptional-regulator
MSTIEDVAKLAGLSRTTVSRVINNHPYVSDEKKKRVQLAMKHLGFVPNSAARRLRKQKTETIAVLVPRITNPFFSRFIEAIEIAASEHKYKLIICQTRYLPEKEMEYLQLLSTKQVDGIILCSLENPWEDVEPYLQHGPIVLCNEYIEEANIPTVKFDHAQGAYIAAKHVLDQGYRNLIFCRGNETKVVSQQRKMGFLRAITEKSRQVEAIDFLENAFSWEDGKRIFHEVLKDKKNPTAILAGGDEVAAGIISEAKRHNWSIPDDLAVIGFDNQILSQITEPGITTIEQPIDEMARKVVDLMMDKIHTKNYRKKELYEFELELLVKGSTMKDKMLLA
>NZ_CP010106.1|WP_000567010.1|1071263_1071392_-|YhfH-family-protein
MIDQPMEFFRNLPTKTCAHCGKEIDEQHEAYHNKCDDCVHEE
>NZ_CP010106.1|WP_000784690.1|1071572_1072307_+|MBL-fold-metallo-hydrolase
MKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATTRQLPELPIYGHTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSISFLKTVHPVTCFAMRITAGDDAVVYSADSSYIPEFIPFTKDADLFICECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS
>NZ_CP010106.1|WP_000897280.1|1072316_1073306_+|lipoate--protein-ligase
MLFIDNKGITDPRINLAIEEYCVKNLDINETYLLFYINEPSIIIGKNQNTVEEINADYVKEKGIHVVRRLSGGGAVYHDLGNLNFSFITKDDGDSFSNFKKFTEPVTKALSKLGVNAELSGRNDILAEGRKISGNAQFSTKGRMFSHGTLLFDSEIDHVVSALKVKMDKIQSKGIKSIRSRVANITEFLNEEMTTEEFRQLLLETIFEGETEIPTYELTEEDWKEIHKLSEERYQNWDWNYGKSPKFNLQHSHRFPVGQVDVRLEVKKGTVTECKIYGDFFGSLDVHDIEERLTGVQFDKDAFTAALEGVDIARYFGNITTEDFLHLFF
>NZ_CP010106.1|WP_000832629.1|1073606_1074035_+|hypothetical-protein
MKRVMYVVLLLSFVIGMTACNSGLPSSRTILSIGKPAEDNVIYFTHTDHKRKIHDIQDMFQNKKWKRNETFSTVNKTPDVVLSIDEDNIGLPALYVTVYFHEDGADAINLFGEHTTLNKEELTKLREKMNAYYPKMIFGLVL
>NZ_CP010106.1|WP_001055200.1|1074196_1075729_+|fatty-acid--CoA-ligase-family-protein
MNLVQSLAETAKKKGEKPAYIFMDQSVSYDQLNKMVTRFSSNLAEMGIGKGDNVALVVGNSPHFLVGLYGTMKAGATVIPVNPIYTADEMHYILQNGDVKTIIVLDVLLPVIQSLTTRLPSLENIIICETSSDFNHTETEKMKTFTSFVGTGDTTYEGPELDEEDVAVILYTSGTTGKPKGAMLTHKNLYSNANDVASYLQYTADDRVVAALPMFHVFCLTVAVNAPIVNGATILMLPKFSPKEVFRICRTYEPTIFAGVPTMYNYLYLFEEASAEDVKTLRLCISGGASMPVALLQNFEKRFNVIVSEGYGLSEASPVTCFNPLDRPRKPGSIGTNIWHVENKIVNELGEEVPVGAVGELIVRGPNVMKGYYNAPEDTAATLKDGWLYTGDLAKMDEEGYFYIVDRKKDIVLVGGYNVYPREVEEVLYTHESVAEVVVIGVPDENLGEAVRAYVVLKQANVTEEELMHYCTLHLAKYKVPKSIEFLIELPKNTTGKLLRRALREKAMQV

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Crispr_ID: NZ_CP010106_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010106_3

4714204-4714743

Orphan

Consensus_repeat	Method
TGGACCTTGAATTCCTTG	CRT

9 spacers

The CRISPR arrays of NZ_CP010106_3

>merge|NZ_CP010106|3|4714204-4714743|CRT
TGGACCTTGGATTCCTTGCGCGCCTTGAATTCCTTGTGGCCCTGTCGCTCCGGTTGCTCCTGTAGCTCCCGTTGGACCTTGAATTCCTTGTGGGCCTTGGATTCCTTGTGGACCTTGAATTCCTTGGGGACCTGTCGCTCCGGTTGCTCCTGTAGCTCCCGTTGGACCTTGAATTCCTTGCGGGCCTTGAATTCCTTGCGGGCCTTGGATTCCTTGTGGACCTTGAATTCCTTGTGGACCTGTCGCTCCGGTTGCTCCTGTAGCTCCCGTTGGGCCTTGAATTCCTTGCGGGCCTTGAATTCCTTGGGGGCCTTGGGGGCCGGTCGGTCCTATATCACCTTGCGGACCTTGGATTCCTTGTGGGCCTTGTGCCCCGGTTGCCCCTGTCGCTCCTTGGATTCCTTGAGGACCTTGGGGACCTTGAATTCCTTGGGGGCCGGTTGGACCTATGTCGCCTTGTGGGCCTTGAATTCCTTGGGGACCTTGTGCTCCGGTTGCCCCCGTTACTCCTTGGATTCCTTGTGGACCTTGAATACCCTG

>NZ_CP010106|3|1|4714204-4714743|CRT
TGGACCTTGGATTCCTTG	CGCGCCTTGAATTCCTTGTGGCCCTGTCGCTCCGGTTGCTCCTGTAGCTCCCGT
TGGACCTTGAATTCCTTG	TGGGCCTTGGATTCCTTG
TGGACCTTGAATTCCTTG	GGGACCTGTCGCTCCGGTTGCTCCTGTAGCTCCCGT
TGGACCTTGAATTCCTTG	CGGGCCTTGAATTCCTTGCGGGCCTTGGATTCCTTG
TGGACCTTGAATTCCTTG	TGGACCTGTCGCTCCGGTTGCTCCTGTAGCTCCCGT
TGGGCCTTGAATTCCTTG	CGGGCCTTGAATTCCTTGGGGGCCTTGGGGGCCGGTCGGTCCTATATCACCTTG
CGGACCTTGGATTCCTTG	TGGGCCTTGTGCCCCGGTTGCCCCTGT
CGCTCCTTGGATTCCTTG	AGGACCTTGGGGACCTTGAATTCCTTGGGGGCCGGTTGGACCTATGTCGCCTTG
TGGGCCTTGAATTCCTTG	GGGACCTTGTGCTCCGGTTGCCCCCGTTACTCCTTGGATTCCTTG
TGGACCTTGAATACCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010106.1\|WP_000621778.1\|4708383_4708617_-\|molybdopterin-converting-factor-subunit-1	unknown	unknown	gnl\|CDD\|340452
NZ_CP010106.1\|WP_080989206.1\|4719381_4721373_+\|spore-germination-protein-GerIA	unknown	unknown	gnl\|CDD\|377020
NZ_CP010106.1\|WP_001110848.1\|4716722_4717046_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_000229698.1\|4709565_4710855_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP010106.1\|WP_000171881.1\|4717872_4718055_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_000611226.1\|4708619_4709084_-\|molybdopterin-synthase-catalytic-subunit-MoaE	unknown	unknown	gnl\|CDD\|223391
NZ_CP010106.1\|WP_001157117.1\|4712491_4713505_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|274250
NZ_CP010106.1\|WP_000049055.1\|4721390_4722491_+\|GerAB/ArcD/ProY-family-transporter	unknown	unknown	gnl\|CDD\|281794
NZ_CP010106.1\|WP_025966474.1\|4709080_4709602_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|349770
NZ_CP010106.1\|WP_000286673.1\|4706177_4706963_-\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|181585
NZ_CP010106.1\|WP_000350861.1\|4706976_4707834_-\|glucose-uptake-protein-GlcU	unknown	unknown	gnl\|CDD\|227309
NZ_CP010106.1\|WP_000512465.1\|4717066_4717291_-\|spore-germination-protein	unknown	unknown	gnl\|CDD\|371190
NZ_CP010106.1\|WP_000180554.1\|4723921_4724344_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|212152
NZ_CP010106.1\|WP_050822134.1\|4718104_4719229_-\|homoserine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|235859
NZ_CP010106.1\|WP_001158108.1\|4711461_4712475_-\|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl\|CDD\|183547
NZ_CP010106.1\|WP_000094146.1\|4710938_4711424_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP010106.1\|WP_000038781.1\|4723638_4723824_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_000411387.1\|4722460_4723546_+\|spore-germination-protein-GerHC	unknown	unknown	gnl\|CDD\|274338
NZ_CP010106.1\|WP_000717679.1\|4707870_4708290_-\|DUF3888-domain-containing-protein	unknown	unknown	gnl\|CDD\|379024
NZ_CP010106.1\|WP_000141207.1\|4717369_4717675_-\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089

Protein	Function_ID	Function_description	E-value
NZ_CP010106.1\|WP_000621778.1\|4708383_4708617_-\|molybdopterin-converting-factor-subunit-1	gnl\|CDD\|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	2.81544e-21
NZ_CP010106.1\|WP_080989206.1\|4719381_4721373_+\|spore-germination-protein-GerIA	gnl\|CDD\|377020	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein.	0
NZ_CP010106.1\|WP_000229698.1\|4709565_4710855_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	6.56366e-160
NZ_CP010106.1\|WP_000611226.1\|4708619_4709084_-\|molybdopterin-synthase-catalytic-subunit-MoaE	gnl\|CDD\|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	1.26007e-56
NZ_CP010106.1\|WP_001157117.1\|4712491_4713505_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.32365e-155
NZ_CP010106.1\|WP_000049055.1\|4721390_4722491_+\|GerAB/ArcD/ProY-family-transporter	gnl\|CDD\|281794	pfam03845, Spore_permease, Spore germination protein.	1.50983e-93
NZ_CP010106.1\|WP_025966474.1\|4709080_4709602_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|349770	cd03116, MobB, molybdopterin-guanine dinucleotide biosynthesis protein B. Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In Escherichia coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.	7.90965e-42
NZ_CP010106.1\|WP_000286673.1\|4706177_4706963_-\|glucose-1-dehydrogenase	gnl\|CDD\|181585	PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional.	0
NZ_CP010106.1\|WP_000350861.1\|4706976_4707834_-\|glucose-uptake-protein-GlcU	gnl\|CDD\|227309	COG4975, GlcU, Putative glucose uptake permease [Carbohydrate transport and metabolism].	1.70097e-118
NZ_CP010106.1\|WP_000512465.1\|4717066_4717291_-\|spore-germination-protein	gnl\|CDD\|371190	pfam10676, gerPA, Spore germination protein gerPA/gerPF. This is a bacterial family of proteins that are required for the formation of functionally normal spores. Proteins in this family may be involved in establishing normal coat structure and/or permeability which could control the access of germinants to their receptor.	1.32133e-13
NZ_CP010106.1\|WP_000180554.1\|4723921_4724344_+\|hypothetical-protein	gnl\|CDD\|212152	cd11545, NTP-PPase_YP_001813558, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in Exiguobacterium sibiricum YP_001813558.1 protein and its bacterial homologs. This family contains a putative NTP_PPase (YP_001813558.1) from Exiguobacterium sibiricum and its bacterial homologs. Unlike normal dimeric dUTPase-like proteins with a central four-helix bundle forming the active site, YP_001813558.1 displays a very unusual interlaced segment-swapped dimer that might be important for it to adapt to an extremely cold environment. Moreover, structural analysis and comparisons indicate that YP_001813558.1 potentially prefers to hydrolyze dCTPs or its derivatives.	1.24419e-63
NZ_CP010106.1\|WP_050822134.1\|4718104_4719229_-\|homoserine-O-acetyltransferase	gnl\|CDD\|235859	PRK06765, PRK06765, homoserine O-acetyltransferase; Provisional.	0
NZ_CP010106.1\|WP_001158108.1\|4711461_4712475_-\|molybdopterin-synthase-adenylyltransferase-MoeB	gnl\|CDD\|183547	PRK12475, PRK12475, thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional.	0
NZ_CP010106.1\|WP_000094146.1\|4710938_4711424_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	1.89059e-97
NZ_CP010106.1\|WP_000411387.1\|4722460_4723546_+\|spore-germination-protein-GerHC	gnl\|CDD\|274338	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family. Members of this protein family are restricted to endospore-forming members of the Firmicutes lineage of bacteria, including the genera Bacillus, Clostridium, Thermoanaerobacter, Carboxydothermus, etc. Members are nearly all predicted lipoproteins and belong to probable transport operons, some of which have been characterized as crucial to germination in response to alanine. Members typically have been gene symbols gerKC, gerAC, gerYC, etc. [Transport and binding proteins, Amino acids, peptides and amines, Cellular processes, Sporulation and germination].	5.87977e-99
NZ_CP010106.1\|WP_000717679.1\|4707870_4708290_-\|DUF3888-domain-containing-protein	gnl\|CDD\|379024	pfam13027, DUF3888, Protein of unknown function (DUF3888). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 111 and 149 amino acids in length.	2.52719e-05
NZ_CP010106.1\|WP_000141207.1\|4717369_4717675_-\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	3.26401e-23

>NZ_CP010106.1|WP_001157117.1|4712491_4713505_-|GTP-3',8-cyclase-MoaA
MQEMVKDFFGRPLQDLRISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVSIGVRKIRLTGGEPLLRKDLTKLIARLVKIDGLIDIGLTTNAIHLTKQAKALKEAGLHRVNVSLDAIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDHQVLPMAAYFKEQGITLRFIEFMDVGSTNGWNFDQVVTKRELIEMIHKVYPLEPAEAHYFGEVAKRYRYVGTNVEVGFITSVSESFCVSCTRARISADGKFYTCLFATEGLDVRELLRGNLSDEELLSVIQDVWMNRKDRYSDERTEESAKNRPKIEMSYIGG
>NZ_CP010106.1|WP_001158108.1|4711461_4712475_-|molybdopterin-synthase-adenylyltransferase-MoeB
MQERYSRQILFSGVGEEGQRKIREKHVLIIGAGALGAANAEAIVRAGVGKVTIADRDYVEWSNLQRQQLYTEEDAKQYKPKAVAAAEHLRAINSEVEITPVVTDVTVQEMEELVNGVDLILDATDNFETRLLINDISQKYNIPWIYGGCVGSYGVTYTILPGKTPCFRCLMEHPASGATCDTAGIIQPAVQLVVAHQTTEALKILVEDYGALRETMLSFDLWNNQQMAFKVNRQKKDTCLSCGRLRTYPSLTFEAQTKTEVLCGRNTVQIRPGVRKNFNLEEIKKRLQRSVEIKATPYLLSFPVEEYRFVLFTDGRAFIHGTNDINVAKSLYARYIG
>NZ_CP010106.1|WP_000094146.1|4710938_4711424_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MSSFTHFNDQGRAKMVDISDKKATVRTAIACSSIVVTKEIYDKISHNEIGKGDVLAVAQIAGIMAAKRTSDIIPMCHPLLLKGVDVSFDWKQSEEQYRLLIEVKVKTEGSTGVEMEALTAASATALTVYDMCKAVDKGMIIGETYLLEKTGGKSGDYTRNS
>NZ_CP010106.1|WP_000229698.1|4709565_4710855_-|molybdopterin-molybdotransferase-MoeA
MVEKRIPIQVAEAVERVMKYAKHGEVEEISITESYGRILGEDVVSDHDVPHFDRSPYDGFAIRAEDTKEATQENPVEFEVIGEIGAGSVFTEEVGSFQVVRIMTGAAIPQDCNAVVMLELTEGFEKNGKTYMKLKRPFNNGDNVSFKGEDIKQNQVLVQKGVAINPGVAALLATFGYSTVKVVKQPVVGIVTTGSELLEVHEPLEPGKIRNSNSYMIAAQIMKAGGKVRYYGQLADELDACFTAVQSAVDEVDILITTGGVSVGDYDYLPAIYERLQANVLFNKIAMRPGSVTTVAEVDGKLLFGLSGNPSACYVGFELFVHPIIKTYLYAKEPHVYRADAILQKDFPKPNPFTRFVRANVTIVDGALQAMPVGLDKSSAVSSLADANAFIVLPGGTRGFETGMKVSVLLLEHSEGCDWPWAKPLQSYK
>NZ_CP010106.1|WP_025966474.1|4709080_4709602_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MAMGKAPSILQIVGYQNSGKTTLVEKVVHALAERKMKVATIKHHGHGGFPEVAQKDSERHRKAGAVVSSVEGAGLLSLSSLRKKWSLQEIIRLYEFFEVDTILIEGYKKENYSKVVLLRSAEDIELLHKVENIVAVITWYDVPANIREEYKVFHITEEELYIDWFLQTVRSAK
>NZ_CP010106.1|WP_000611226.1|4708619_4709084_-|molybdopterin-synthase-catalytic-subunit-MoaE
MINTYYEVIDTEISIEEVTKKVIRRECGAVTTFIGTVREFTKGRRTLYLEYVAYKTMAEKMLEKIGLEVKEKWPGTYVAITHRIGTLQISDIAVVVAVSTPHRKAAYEANEYIMERIKQIVPIWKKEFWEDGDSWIGDQLEKTPYPAGEPGKEL
>NZ_CP010106.1|WP_000621778.1|4708383_4708617_-|molybdopterin-converting-factor-subunit-1
MIRVLLFAHLQEEAGTSELQIEKENITVAQLKDVVANEYNVPVSEPIMVAINEEYANEDDRVQSGDVVALIPPVSGG
>NZ_CP010106.1|WP_000717679.1|4707870_4708290_-|DUF3888-domain-containing-protein
MKKICVVITMLCVAFFSSPSDSFAKESREQLLESALSNRYYSVIRQVTEDQYECASVIDIKRLGKKDEFVPRYEVKLQFLTFQGAHNPPNDKVTLTLEDHLDHVKIKKVEREKNVSDVIAEKVCEREKEKIKAHSNDLE
>NZ_CP010106.1|WP_000350861.1|4706976_4707834_-|glucose-uptake-protein-GlcU
MDIFLAILPAIFWGSIVLFNVKLGGGPYSQTLGTTFGALIFSIVVYIFMKPVLTPTVIGVGVVSGLFWALGQANQLKSIDLMGVSRTMPISTGLQLVATTLFGVIVFHEWSTTISVVLGILALVCIIIGVILTSLQSEEEKNAEQAANFKRGIVILLISTVGYLVYVVVIRLFNVDGWSALLPQAVGMVLGGILLTFKHHPFNKYAIRNIIPGLIWAAGNMFLFISQPRVGVATSFSLSQMGIIISTLGGILILGEKKTKRQLTGIVVGIVFIIAAGIMLGIAKS
>NZ_CP010106.1|WP_000286673.1|4706177_4706963_-|glucose-1-dehydrogenase
MYSDLAGKVVVITGSATGLGRAMGVRFAKEKAKVVINYRSRESEANDVLEEIKKVGGEAIAVKGDVTVESDVVNLIQSAVKEFGTLDVMINNAGIENAVPSHEMPLEDWNRVINTNLTGAFLGSREAIKYFVEHDIKGSVINMSSVHEKIPWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPKKRADVESMIPMGYIGKPEEIAAVATWLASSEASYVTGITLFADGGMTLYPSFQAGRG
>NZ_CP010106.1|WP_001110848.1|4716722_4717046_-|hypothetical-protein
MPAHIKEFVIVNNTGNIFTGDNLSDTSFTASKSYSGSMGCTWIDVVTVIGTETKLCLQPGDSVTTTYTRGTPAGTVTGANMGQNVNTSSIAQAVPNTDNMDSIAGLP
>NZ_CP010106.1|WP_000512465.1|4717066_4717291_-|spore-germination-protein
MGINLRKVKIINNTGAVNVGDCYDLSPLAVAKVYAGAGGSSAAIFLNGKRQPEAVIRTSVFLPPLATSTRTLGS
>NZ_CP010106.1|WP_000141207.1|4717369_4717675_-|rhodanese-like-domain-containing-protein
MTEVKTITTEEVQERLENGETLFLVDVREDEEVAAGKIPEAVHIKMGDIPHKVDFFNKENEYIFICRSGMRSENVCHYLNEQGFKTVNMVGGMLQYEGETK
>NZ_CP010106.1|WP_000171881.1|4717872_4718055_+|hypothetical-protein
MTLFLFIIGIVFLLAAIIVLSMKNNKKIKSPQEMSFLFLLLSIAFFGIAIATYIFRLQIM
>NZ_CP010106.1|WP_050822134.1|4718104_4719229_-|homoserine-O-acetyltransferase
MQIVKKEKFVLKGFTFENGREIPVQMGYETYGTLNRERSNVILVCHYFSATSHAAGKYTVHDEESGWWDGLIGPGKAIDTNKYFVICTDNLCNVQVRNPYVITTGPKSINPETGEEYAMDFPIFTFLNVARVQYELIKGMGISRLHAVIGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNPIITSVNVAQNAIEAIQLDPNWKDGKYGEEQPIKGLHLANRMMFMNAFDEYFYERTFSRNSIEVEPYEKFSTLTSFEKEINKATYRSIELVDANSWMYTAKAVLLHDITHGFSSLEESLSNIEANVLMIPCKQDLLQPSRYNYKMVDILQKQGKYAEVYEIESINGHMAGVLDIHLFEKKVYEFLNRKVSSFV
>NZ_CP010106.1|WP_080989206.1|4719381_4721373_+|spore-germination-protein-GerIA
MIWNWLRKKKKSNKPEANETDNQEQHSNNQEDDNKEQTRSMKHNKGKNNEQKDSSQNKQQSAKQEDSSQDKQQNAKQEDSSQDKQQNAKQGDSSQDKQQNAKQEDSSQDKQQSAKQDDPSQDKQQNAKQDDSSQDKQQSAKQNDPSQDKQQNAKQDDSSQDRQQSSGGNSIYDFTKPEKDRIHSLQNLIEKLKKSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLERPNASLEELKEHIPMSGITITNDLQKIEDMVLKGHAIIQLNQQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIIGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYLQELMGEKSIFPLYINTERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWMYATFSRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKKAAKGISTKHRSDFDD
>NZ_CP010106.1|WP_000049055.1|4721390_4722491_+|GerAB/ArcD/ProY-family-transporter
MSKVQEKYQISPIFVFFLIHGAQFGAGVLGFARIIAKAAGYDGWMGVIITGILIHILIWMMYVLLKETNGNLVDLHRQTFGKWLGNGISIIFMAYFLIVSISVIRTYVEIIQVWMFPTASTFMLTLFLCLVSYYIISSGFRVITGICVISVGGTLGYLFLSLFVLKYSHWDNLLPIFTHSFSDILKSAQLSIYSMTGFEIYFMVYPFVKKPMQSHKYAQFGALFSNLLYLFSTLLAFAFFSEKQLLKTIWAQLSMTQVIQLPFIERLEYIAISGYALVIISSFILPLWASMRATHEIFRVKQRGVLIAFIFITLIVSQLLTNRHDINNFISNVSKVSFWLIYVYIPILFIIVWVKRKWKKSKAQAN
>NZ_CP010106.1|WP_000411387.1|4722460_4723546_+|spore-germination-protein-GerHC
MEKIKSTSKLILISCITFFSLIGCLQKNIIDDVQLIQGSVFDVAKDNKVKVTFVCPIQKKGNKVQVFEGSANAVKQVKADTSLESSQPFASGQMRVALYTIRLAKTGMSTSFDTLLRDVNIGNALYAALLDGNGTELLKGKYSTSYNVAIYIKKLLEHNMETGPLPADNLHIGAFRYYQEGKDYYIPILKKHGDKIKITGIGLFKKDKYIGKIAEKDMFIFKGLLEKHKLDSHEFKTDSAYVMINNIRSVPTYDIKIKNGKPSFFIHVRLDARIQELSKQINLENNKNTKNIEKDVQKQLDKQAAKLIKQFKSLGVDPLGLGAKYKQHYRPFKLEEWRQMYKDVPVHIKYTVNITNSGVIE
>NZ_CP010106.1|WP_000038781.1|4723638_4723824_+|hypothetical-protein
MSKKLVKPILNGILFLGVFLFAHTYLKNVSFTRYLLVVIPMLLVGIFGIDLISSLLIKKEE
>NZ_CP010106.1|WP_000180554.1|4723921_4724344_+|hypothetical-protein
MTNEKGLDKGYELVAKMHEVFGHPVTNTPTKLTEERAKIRASFMQEELEEFLEATTVEDQYDALIDLIYFAFGTFAEMGVRPDKGFEIVNNANMAKLFPDGKPRFREGDGKILKPEGWQAPEPQLRAEIERQRQEAEKNC

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Crispr_ID: NZ_CP010106_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010106_4

4951447-4951565

Orphan

Consensus_repeat	Method
GTTTCTTCCTACCGAACATACAGCTTAAACAAACGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010106_4

>merge|NZ_CP010106|4|4951447-4951565|CRISPRCasFinder
GTTTCTTCCTACCGAACATACAGCTTAAACAAACGTTTGATTAATTCTCCATTTCTCTTTGTTAACCCTTGAGTTACATCGGTTTCTTCCTACCGAACATACAGCTTAAACAAACGTTT

>NZ_CP010106|4|3|4951447-4951565|CRISPRCasFinder
GTTTCTTCCTACCGAACATACAGCTTAAACAAACGTTT	GATTAATTCTCCATTTCTCTTTGTTAACCCTTGAGTTACATCG
GTTTCTTCCTACCGAACATACAGCTTAAACAAACGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010106.1\|WP_050822164.1\|4950827_4951193_-\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_CP010106.1\|WP_000735086.1\|4945696_4946509_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_CP010106.1\|WP_001206346.1\|4959782_4960955_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|181072
NZ_CP010106.1\|WP_000074938.1\|4956360_4956909_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379115
NZ_CP010106.1\|WP_000416291.1\|4957776_4959561_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173850
NZ_CP010106.1\|WP_000640870.1\|4949566_4949911_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224572
NZ_CP010106.1\|WP_000152167.1\|4943364_4944657_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_CP010106.1\|WP_001002987.1\|4955222_4955471_-\|spore-coat-protein	unknown	unknown	gnl\|CDD\|377935
NZ_CP010106.1\|WP_000929160.1\|4944672_4945458_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP010106.1\|WP_000359401.1\|4946531_4947197_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP010106.1\|WP_001180555.1\|4955484_4955670_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_000666172.1\|4952988_4954002_-\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|379113
NZ_CP010106.1\|WP_002097965.1\|4954024_4955218_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|133427
NZ_CP010106.1\|WP_001242137.1\|4948757_4949102_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_000026896.1\|4950402_4950786_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP010106.1\|WP_001220135.1\|4956912_4957635_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293807
NZ_CP010106.1\|WP_000826876.1\|4951604_4952132_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_000568176.1\|4949254_4949554_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP010106.1\|WP_000713762.1\|4952275_4952923_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239481
NZ_CP010106.1\|WP_000601780.1\|4947189_4948215_-\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058

Protein	Function_ID	Function_description	E-value
NZ_CP010106.1\|WP_050822164.1\|4950827_4951193_-\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	3.36478e-60
NZ_CP010106.1\|WP_000735086.1\|4945696_4946509_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	4.41843e-113
NZ_CP010106.1\|WP_001206346.1\|4959782_4960955_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|181072	PRK07661, PRK07661, acetyl-CoA C-acetyltransferase.	0
NZ_CP010106.1\|WP_000416291.1\|4957776_4959561_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173850	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase. VLCAD is an acyl-CoA dehydrogenase (ACAD), which is found in the mitochondria of eukaryotes and in some bacteria. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. VLCAD acts as a homodimer.	0
NZ_CP010106.1\|WP_000640870.1\|4949566_4949911_-\|hypothetical-protein	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	2.03274e-21
NZ_CP010106.1\|WP_000074938.1\|4956360_4956909_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379115	pfam13305, WHG, WHG domain. This presumed domain is around 80 amino acids in length. It is found to the C-terminus of a DNA-binding helix-turn-helix domain. This domain may be involved in binding to an as yet unknown ligand that allows a transcriptional regulation response to that molecule. The domain is named WHG after three conserved residues near the C-terminus of the domain.	3.70554e-26
NZ_CP010106.1\|WP_001002987.1\|4955222_4955471_-\|spore-coat-protein	gnl\|CDD\|377935	pfam07875, Coat_F, Coat F domain. The Coat F proteins, which contribute to the Bacillales spore coat. It occurs multiple times in the genomes it is found in.	9.62029e-15
NZ_CP010106.1\|WP_000929160.1\|4944672_4945458_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	8.75164e-150
NZ_CP010106.1\|WP_000359401.1\|4946531_4947197_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	8.57648e-99
NZ_CP010106.1\|WP_000666172.1\|4952988_4954002_-\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|379113	pfam13303, PTS_EIIC_2, Phosphotransferase system, EIIC. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.	1.57356e-86
NZ_CP010106.1\|WP_002097965.1\|4954024_4955218_-\|L-lactate-dehydrogenase	gnl\|CDD\|133427	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP010106.1\|WP_000152167.1\|4943364_4944657_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	3.81959e-130
NZ_CP010106.1\|WP_000026896.1\|4950402_4950786_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	6.96592e-70
NZ_CP010106.1\|WP_001220135.1\|4956912_4957635_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.36824e-72
NZ_CP010106.1\|WP_000568176.1\|4949254_4949554_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	3.82744e-18
NZ_CP010106.1\|WP_000713762.1\|4952275_4952923_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239481	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.	6.82305e-16
NZ_CP010106.1\|WP_000601780.1\|4947189_4948215_-\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	1.45038e-176

>NZ_CP010106.1|WP_050822164.1|4950827_4951193_-|arsenate-reductase-family-protein
MTVTFYSYPKCGTCQKAKKWFEANDVAYEMIHIVENPPSKEDLRNLHEKSELTLKKFFNTSGMRYRELGLKDKLKDASEDEMYELLASDGMLIKRPIVTDGTNVTLGFNEEQFESVWKKYQ
>NZ_CP010106.1|WP_000026896.1|4950402_4950786_-|glycine-cleavage-system-protein-GcvH
MSIPNNLRYSEEHEWVKTEGNEVVIGITHFAQGELGDIVFVELPEVGATIEADEPFGSVESVKTVSELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMTNQD
>NZ_CP010106.1|WP_000640870.1|4949566_4949911_-|hypothetical-protein
MIYVEKVIIVEGTSDRRKIESIIREPVEIVCTNGTIGLSKMDELVDQFFDKEVYVLVDADDAGEKLRKQFRKEFPQAEHIYIDRSYREVATAPSTHLANVLWGADIDVYTEYLR
>NZ_CP010106.1|WP_000568176.1|4949254_4949554_-|thioredoxin-family-protein
MIDWTGAEATALIENEEKTVLYVYTPMCGTCQLAKKMLTVVEMTIEGLKIGMLDLNYAPYLAKEYGIESVPCLLVFENGTLMKKIYAFHSVEYLYTELK
>NZ_CP010106.1|WP_001242137.1|4948757_4949102_-|hypothetical-protein
MRLYSLLQSFVNYANGQYHLEPLLRKEEKTVNFRFGDESCSLQISRDYIELVHEERGTEQIICLDEKDIEQLVNGNVRLQMLMNDGRVQYSGTYRTMLLVESMFHICKPMSVGA
>NZ_CP010106.1|WP_000601780.1|4947189_4948215_-|methionine-ABC-transporter-ATP-binding-protein
MILLENVKKIYKAKSGDVTAVDNANLKIEKGEIFGVIGYSGAGKSSLIRLFNQLEKPTSGQITIANRVISAITGSELRKARQEIGMIFQHFNLLWSRTVRENIEFPLEIAGVDKAKRRKRVDELIHLVGLEGRGDAYPSQLSGGQKQRVGIARALANNPQVLLCDEATSALDPETTDQILDLLLDINKRLGLTIVLITHEMHVIRKICNRVAVMERGKIVETGPVLDVFRNPKQDITKRFVQQLTDSEDTNETIESLIEKYPDGKVIRLQFIGEAVERPVLQRLMQRSDIEVSILQGNIAQTNNGSYGSLVVHLNGEETAIQQAIEGIHQDQVELEVIAHG
>NZ_CP010106.1|WP_000359401.1|4946531_4947197_-|ABC-transporter-permease
MDKLLANVDWNQMLEATGETLYMTAIAALATFVLGLILGLLLFMTAKDNLWENKSINTVIGAFVNIFRSIPFIILIILLIPFTKILLGTILGASAALPALIIGAAPFYARMVEIALREIDKGVIEASKAMGAKTSTIILKVLIPESLPALVSGITVTTIALVGYTAMAGVVGAGGLGTLAYLEGFQRGNNDVTIVATICVLLVVFLIQWIGDSLTTRIDKR
>NZ_CP010106.1|WP_000735086.1|4945696_4946509_-|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVKKFQDYVLPNKSLADKDLDANYFQHIPYLEKEIKDKKYDFEIAGKIHIEPIGVYSQKYKSLKELPDGATIIMSNSVTDHGRGLAILQKEGILKIKDGVDPVSATPKDIADNPKNLKFKTDIEPGLLPQVYNNKEGDAVLINSNYAIDAKLNPEKDAIAIEGDDSPYANVVVVRKGDKDKKAIKELVEVLHSKEIQDFITKEYKGAVLPISE
>NZ_CP010106.1|WP_000929160.1|4944672_4945458_-|Fe-S-cluster-assembly-ATPase-SufC
MAGSTLTVKDLHVSIDGKEILKGVNLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTEGSIIIDGEDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRTLDKNMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDIDALKVVSKGINEMRGEEFGCLMITHYQRLLNYITPDFVHVMMNGRIVKSGGPELAQRLEAEGYDWIKKELGIEDETTEQEA
>NZ_CP010106.1|WP_000152167.1|4943364_4944657_-|Fe-S-cluster-assembly-protein-SufD
MTIGTLPFDQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDFIGKGDAAKQEPVSSLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVADANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGRDGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERKVR
>NZ_CP010106.1|WP_000826876.1|4951604_4952132_-|hypothetical-protein
MKRLSYFLFFILICLVGAGCAKDKEGEKLEYNGRALVIGVVGEKPKDTFRNVKFEEMKLEALEKKSKEVDGFLIMKDHFQEASTEQYKNVFSSLKKPVFFIGLQDKSYSIFITKGIEYNSARKDVNAMYTQGFANIGSGEGQQWAIGLSNGGNTEESIHNMYIVVFQTIADYLNR
>NZ_CP010106.1|WP_000713762.1|4952275_4952923_+|phosphatase-PAP2-family-protein
MKKFKLSSFLPLSYILLLVLVSPLYDVLNKSTVHAVDVTTVVDDWIPFVKAFIIPYLLWFPYLYGALIYYCFADRKQYYVTLSSIIFGKLACFSIYYFWQTTVPRPTVVGTDVFSELVRYIYSIDQPVNCFPSIHVLTTFVIMLAAFKRREQHAFEYYILTFFGTLIILSTLFTKQHAFVDAISGMTLASILYFGVQLLLAKEPIRVPVKQNHRM
>NZ_CP010106.1|WP_000666172.1|4952988_4954002_-|PTS-sugar-transporter-subunit-IIC
MKEYIMSRVFKASAGIAQGIFVSLGIGLLIENIGRIVDIPLLITIGVVAKSLMAPAIGAGIAFMLGANGLVIFSAMVAGAIGAGSISITEAGLIIKTGEPIGALLTATLAVYIGKRLSGKTALDMMLVPFAAILGSGLVGIWLSHNITPVLNAVGAFIKDSSAGSPFIASIVIAVVWGLLLISPASSAALAIALSLDGVAGGAALAGCVAQFIGFSVISAKENNLGGILAQALCTPKVQLPNITKNPMILVPTVVASAIVGPVSALIFQLEAGKEIAGLGLSSLIAPINLISSQGWEVLPAMVITYIVIPVAVSYILYIALKKAGRIHSGDMTVPQS
>NZ_CP010106.1|WP_002097965.1|4954024_4955218_-|L-lactate-dehydrogenase
MTKNGRMKSLVFCFEHVNKYKINIFPVVTNMTKMEYNNSQKGQILCSIFHKVSMVSIVGTSIIRSVKSKRNRLYDQLGEIAMKRHTRKIAIIGTGLVGSSCAYSIVNQGICEELLLIDINHERAVGEAMDLSHCINFTNTRTKVYAGSYEDCKDMDIVIITAGPAPKTGQSRLDTLGASAKIMESVVGGVMESGFDGIFLLASNPVDIITYEVWKLSGLPRNRVIGTGTSLDSSRLRTILSEMLHVDPRSIHGYSLGEHGDSQMVAWSHVTVGGKPVLQILEEQKERFGEIDLDEIVEKTAKAGWEIYKRKGTTYYGIGNSLAYIASSIFNDDHRVIAVSAILDGEYGEYDICTGVPAIITRDGIREVVELNLTEDEESRFAKSNDILRDYMKTIGY
>NZ_CP010106.1|WP_001002987.1|4955222_4955471_-|spore-coat-protein
MNEKDMVNDYLAGLNASLTSYANYIAQSDNEQLHQTLIQIRNQDEMRQRNMYEYAKQKSYYKPAAPANPMIVQQLKSQLSAE
>NZ_CP010106.1|WP_001180555.1|4955484_4955670_-|hypothetical-protein
MQNLTELEVENLRHLIGGHATIINKLEQYAQTCTDPQLKQMLQKDAQDARNTKQQLMTFLG
>NZ_CP010106.1|WP_000074938.1|4956360_4956909_-|TetR/AcrR-family-transcriptional-regulator
MSPRIGLTLQKIVETAAEIADTNGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKNLGIYGIKQLHNKLEEAAEDKRMDEAIHALGEAYVAFVRKHPGLYEATFLRDEEVRKAGDGIVKLCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQGGFGLPLDLDTSLHVLLETFIKGLRE
>NZ_CP010106.1|WP_001220135.1|4956912_4957635_-|MBL-fold-metallo-hydrolase
MRIIHEQTVYQLSFLPRVFPVNCYFVEEEDGLTLIDAALPYSAKGILQAAEKIGKPITKIVLTHAHDDHIGALDALKEVLPHVPVYISKRDAKLLEGDTTLQKDEPNIPIKGGVPKKVKTVPDVLLEDGDRVGSLLAIMTPGHTPGSMSFLDVRNKALIVGDAFQTRGGMAVSGQMKFWFPFPAMATWSKEISLQSAEKLSEYEPSLLAAGHGEMIKNPGTVIELAIKEAKRNIESKKEG
>NZ_CP010106.1|WP_000416291.1|4957776_4959561_-|acyl-CoA-dehydrogenase
MEKTVGNAVKGGSFLVDEITIDQVFTPEDFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEELMMMMPEEVGDEPLALQKYLVTNAKKIGLMVAGLAAQKYGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEADAKETLIAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKILEDERYTV
>NZ_CP010106.1|WP_001206346.1|4959782_4960955_-|acetyl-CoA-C-acetyltransferase
MREAVIVAGARTPIGKAKRGSLKTVRPDDLGALVVKETLKRANYEGPIDDLIFGCAMPEAEQGLNMARNIGGLAGLSYDVPAITINRYCSSGLQSIAYGAERIMLGHSEAVLSGGAESMSLVPMMGHVVRPNSRLVEAAPEYYMGMGHTAEQVAVKYGISREEQDAFAVRSHQRAAKALAAGNFVDETVPVDVTLRSVGSNNKLQEETITFAQDEGVRAETTLDILGKLRPAFNVRGSVTAGNSSQMSDGAASVLLMDREKAVSDGMKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGMGAAGVFELL

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Crispr_ID: NZ_CP010106_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010106_5

5215717-5215850

Orphan

Consensus_repeat	Method
GTTGATTTCTCTTCTTTTTGAGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP010106_5

>merge|NZ_CP010106|5|5215717-5215850|CRISPRCasFinder
GTTGATTTTTCTTCTTTCTTCGGTTCTTCTTTTTTGTCACTAGTTGAACCGCTTGTTGATTTCTCTTCTTTTTGAGACTTGTCTTCTGTTTTACTTTCAGGTTTCGTGCTCGTTGACTTCTCTTCTTTTTGAGA

>NZ_CP010106|5|4|5215717-5215850|CRISPRCasFinder
GTTGATTTTTCTTCTTTCTTCGG	TTCTTCTTTTTTGTCACTAGTTGAACCGCTT
GTTGATTTCTCTTCTTTTTGAGA	CTTGTCTTCTGTTTTACTTTCAGGTTTCGTGCTC
GTTGACTTCTCTTCTTTTTGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010106.1\|WP_000457978.1\|5213651_5214653_-\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|237563
NZ_CP010106.1\|WP_000393110.1\|5210766_5211510_-\|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226453
NZ_CP010106.1\|WP_000544012.1\|5214813_5215086_-\|sporulation-transcriptional-regulator-SpoIIID	unknown	unknown	gnl\|CDD\|378813
NZ_CP010106.1\|WP_000008903.1\|5215394_5215529_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010106.1\|WP_000411274.1\|5220798_5222103_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NZ_CP010106.1\|WP_000998931.1\|5224859_5226362_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622
NZ_CP010106.1\|WP_000568220.1\|5226358_5228221_-\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
NZ_CP010106.1\|WP_001185959.1\|5218465_5219473_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP010106.1\|WP_000931959.1\|5212789_5213224_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP010106.1\|WP_000367467.1\|5223337_5224858_-\|NADH-quinone-oxidoreductase-subunit-NuoN	unknown	unknown	gnl\|CDD\|235603
NZ_CP010106.1\|WP_001207164.1\|5210075_5210777_-\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP010106.1\|WP_000057889.1\|5222898_5223135_-\|DUF1146-domain-containing-protein	unknown	unknown	gnl\|CDD\|227173
NZ_CP010106.1\|WP_000467941.1\|5211768_5212446_-\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP010106.1\|WP_050822177.1\|5208072_5208954_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP010106.1\|WP_002097926.1\|5209196_5209964_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226870
NZ_CP010106.1\|WP_000362293.1\|5207368_5208055_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NZ_CP010106.1\|WP_000672663.1\|5219572_5220592_-\|stage-II-sporulation-protein-D	unknown	unknown	gnl\|CDD\|274332
NZ_CP010106.1\|WP_002005985.1\|5222142_5222853_-\|YwmB-family-TATA-box-binding-protein	unknown	unknown	gnl\|CDD\|370056
NZ_CP010106.1\|WP_000170864.1\|5217442_5218285_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP010106.1\|WP_000144442.1\|5216738_5217443_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925

Protein	Function_ID	Function_description	E-value
NZ_CP010106.1\|WP_000457978.1\|5213651_5214653_-\|rod-shape-determining-protein	gnl\|CDD\|237563	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional.	0
NZ_CP010106.1\|WP_000393110.1\|5210766_5211510_-\|capsular-polysaccharide-biosynthesis-protein	gnl\|CDD\|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	1.60281e-83
NZ_CP010106.1\|WP_000544012.1\|5214813_5215086_-\|sporulation-transcriptional-regulator-SpoIIID	gnl\|CDD\|378813	pfam12116, SpoIIID, Stage III sporulation protein D. This stage III sporulation protein is a small DNA-binding family that is essential for gene expression of the mother-cell compartment during sporulation. The domain is found in bacteria and viruses, and is about 40 amino acids in length. It has a conserved RGG sequence motif.	1.17272e-38
NZ_CP010106.1\|WP_000411274.1\|5220798_5222103_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_CP010106.1\|WP_000998931.1\|5224859_5226362_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	6.50143e-177
NZ_CP010106.1\|WP_000568220.1\|5226358_5228221_-\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
NZ_CP010106.1\|WP_001185959.1\|5218465_5219473_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.25842e-31
NZ_CP010106.1\|WP_000931959.1\|5212789_5213224_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	5.26499e-95
NZ_CP010106.1\|WP_000367467.1\|5223337_5224858_-\|NADH-quinone-oxidoreductase-subunit-NuoN	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	4.99412e-150
NZ_CP010106.1\|WP_001207164.1\|5210075_5210777_-\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	8.02666e-84
NZ_CP010106.1\|WP_000057889.1\|5222898_5223135_-\|DUF1146-domain-containing-protein	gnl\|CDD\|227173	COG4836, COG4836, Predicted membrane protein [Function unknown].	1.23409e-23
NZ_CP010106.1\|WP_000467941.1\|5211768_5212446_-\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	1.09777e-81
NZ_CP010106.1\|WP_050822177.1\|5208072_5208954_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	0
NZ_CP010106.1\|WP_002097926.1\|5209196_5209964_-\|hypothetical-protein	gnl\|CDD\|226870	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	1.45014e-105
NZ_CP010106.1\|WP_000362293.1\|5207368_5208055_-\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	8.0825e-104
NZ_CP010106.1\|WP_000672663.1\|5219572_5220592_-\|stage-II-sporulation-protein-D	gnl\|CDD\|274332	TIGR02870, Stage_II_sporulation_protein_D, stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell. [Cellular processes, Sporulation and germination].	5.80584e-135
NZ_CP010106.1\|WP_002005985.1\|5222142_5222853_-\|YwmB-family-TATA-box-binding-protein	gnl\|CDD\|370056	pfam08680, DUF1779, TATA-box binding. TATA-box_bdg is a family of bacterial proteins. YwmB from Bacillus subtilis contains a circularly permuted TATA-box binding protein-like fold. Jian-Xiang Liu, Qi Xie, Jun Lin. Protein Structural Data Mining and Evolutionary Bioinformatic Analysis on Domains of TATA-box Binding Protein-like Fold. Life Science Journal 2014; 11(2): 298-302 (not yet in PubMed 27-02-2014).	5.16446e-34
NZ_CP010106.1\|WP_000170864.1\|5217442_5218285_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.84744e-90
NZ_CP010106.1\|WP_000144442.1\|5216738_5217443_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	0.000949194

>NZ_CP010106.1|WP_000008903.1|5215394_5215529_-|hypothetical-protein
MSFLFVLSTAIILLFVLFTLYYYIAGKKEVPHHQLLEEELEREE
>NZ_CP010106.1|WP_000544012.1|5214813_5215086_-|sporulation-transcriptional-regulator-SpoIIID
MHDYIKERTIKIGKYIVETRKTVRVIAKEFGVSKSTVHKDLTERLPEINPELANEVKEILDYHKSIRHLRGGEATKQKYRKEDVEKPVRQ
>NZ_CP010106.1|WP_000457978.1|5213651_5214653_-|rod-shape-determining-protein
MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVAIDRNSGKVLAVGEEARSMVGRTPGNIVAIRPLKDGVIADFEITEAMLKYFINKLDVKSFFSKPRILICCPTNITSVEQKAIREAAERSGGKTVFLEEEPKVAAVGAGMEIFQPSGNMVVDIGGGTTDIAVLSMGDIVTSSSIKMAGDKFDMEILNYIKRKYKLLIGERTSEDIKIKVGTVFPGARSEELEIRGRDMVTGLPRTITVCSEEITEALKENAAVIVQAAKGVLERTPPELSADIIDRGVILTGGGALLHGIDMLLAEELKVPVLIAENPMHCVAVGTGIMLENIDRLPKRALR
>NZ_CP010106.1|WP_000931959.1|5212789_5213224_-|3-hydroxyacyl-ACP-dehydratase-FabZ
MLNIEQIKEIIPHRYPFLLVDKILEVDEGKRAVGIKNVSANEEFFNGHFPDYAVMPGVLIVEALAQVGAVAVLKKEENRGRLAFFAGIDNCRFKKQVRPGDQLRLEVEMTRVRGPIGKGKAIATVDGEVACEAEITFAIGDKKE
>NZ_CP010106.1|WP_000467941.1|5211768_5212446_-|CpsD/CapB-family-tyrosine-protein-kinase
MFGRKKRKPLRQLITHKEPKSRITEQYRNIRTNIEFTSVDNHVRSIIVTSADPGDGKTTTIANLAVVFGQQGKKVLLIGADLRKPTIQNLFAIHISNGLTNLLSGQAKLMQCIQKTDIENVYLMAAGPIPPNPAELLGSRAMDEALLEAYNMFDIILIDTPPVLAVTDAQILANKCDGIVLVVRSEKTEKDKIVKAKQILDKASGKILGVVLNDKREEKEQYGYY
>NZ_CP010106.1|WP_000393110.1|5210766_5211510_-|capsular-polysaccharide-biosynthesis-protein
MEETISLKDLFHILKKRLAMILVIAFGAAIVSAIVSFFFMTPIYQSSTQILVNQKKQEGSSIQLGEIQSNIQLTNTYKVIIKSPVILDQVNEKLNLNMTAQALTGKINVANEKDSQVISLTVEDKDPKLARDIANATADVFKGEVAKIMSVDNVTVLSKAEVAENQSPIKPRPMLNVAIAFVVGLMASVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETMNVKSHAPSSRKVRGQTIGS
>NZ_CP010106.1|WP_001207164.1|5210075_5210777_-|CpsD/CapB-family-tyrosine-protein-kinase
MALNLFKKKKNHRQRRQLIAHQQPKSPISEQYRNIRTNIEFAAVDTNLHSLMVTSANPSEGKTTTTANMAVVFAQQGKKVLLIDADMRKPAMHQMFQVDNIFGLTNVLTHSERLEKCVQTTSVDNLHFLACGPIPPNPAELLGSKSMKELLGQAYSMYDLVIFDMPPILAVTDAQIMANVCDASILVVRSESTEKETAVKAKGLLESAKGKLLGVVLNDREREEGLYYYYGAN
>NZ_CP010106.1|WP_002097926.1|5209196_5209964_-|hypothetical-protein
MIDLHCHILPGIDDGAQTVTDSLAMAQQAVSEGIHTIVATPHHQNGKYINERTSIIHHVKQLNDELQQHNIPLTILPGQEVRLYGDLLEDYEADKIVTLNETNKYIFIEFPSNHVPRYAEQLLYELRVKGMIPIIVHPERNAELIERPDKLYNLVNKGALTQVTAGSLLGKFGKKIKKFSLQLVEHNLTHMVASDAHNTTSRGFHLAESYELIEKEFGMNVMSDLKENPYLLISGKAIYKEDPEQIRRKKLFGIF
>NZ_CP010106.1|WP_050822177.1|5208072_5208954_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIVEEAIESGIEDIIIVTGKGKRAIEDHFDHSFELEQSLLEKGKHEMLEKVQASSKINIHYIRQKEPKGLGHAVWCARKFIGNEPFAVLLGDDIVQAKTPCLRQLMDQYEGTQSSVIGVQTVPENETHRYGIIDPIEQSDRRYQVRQFVEKPAQGTAPSNLAIMGRYVLTPEIFMFLENQQTGAGGEIQLTDAIQRLNEIQRVFAYDFEGTRYDVGEKLGFIKTTIEVALQQTELKEELIDYIRALAMKESVHV
>NZ_CP010106.1|WP_000362293.1|5207368_5208055_-|sugar-transferase
MDLAKVSSRDVAKEKNEEIDFEKVNSRKVYLVSKRCMDFIGALCGLIVLSPIFIVIAFLIKYEDSKGPVFFKQVRVGKNGKEFYMYKFRSMVTDAEEKLQDLLKYNEVSGAMFKMKEDPRVTRIGKFIRKTSLDELPQLLNVLKGEMSLVGPRPPLPREVEEYTQYDKQRLFVTPGCAGLWQVTERNSVGFKEMVELDLEYINKRSLSYDLKIILKTIQIMIRSNGAS
>NZ_CP010106.1|WP_000144442.1|5216738_5217443_-|ABC-transporter-permease
MTFSMRRVSAIFRKEVQDFKTNSQVLLMAFLPIILSFLFSRFGAGKEMLGITTITAFLFVAGFVQSMVIAEEKEKHTLRVLMLSPASSVEVLLGKSILTACLTLGICIVNLFILDQFSGNLLLLGFIFLCGTILFIVIGTMIGLLAASVPQTSIIGMPILMTMYLAVQFEPMVENKVIKTMIGYLPTSHIVKALNSLVGGAGFSSISGHVLNVAVWLIISLFVCLIVYKKKQLD
>NZ_CP010106.1|WP_000170864.1|5217442_5218285_-|ABC-transporter-ATP-binding-protein
MTLAIEMKDVMKSFSGKTALRNVNIEVKQGEIFGFLGPSGSGKTTTVKILTSQLLHSVGTVRVLGKDITGPSSIDYKRIGILTDNSGLYERLSIYDNLLLFCDLYDCKKERIDEVLAQVNLLDDKKTPVKKLSKGMKQRVTLARAILHKPDILFLDEPTSALDPVNVQNIHKILKDLNKEGTTIFLTTHNMDEAETLCNRIAFLCGGEIVALDTPENLRLQYAKDQIQVVLKDKKKETVQKDELGAKRISEWMNKGELLSIHSHEPTLGDIFIEVTGRGL
>NZ_CP010106.1|WP_001185959.1|5218465_5219473_-|ATP-binding-cassette-domain-containing-protein
MALLELKQLGKTNQLPEIELKVEKGQCIVLQCNNHTAKVLHRIIIGEEEASTGNVLFEGEAIGKKNYSRIGFCFLKDEAYDRLKVKEYFKFLLGLYESKVSIEEVVQYVGLLDKLNVKIEKLSFSEKRRLHIGRIMIHHPDLVILEEPEQNVDIESTIIIRKAIMKMKEQGKAIFITSSFLSDALSLTEDVYILNNDGVKKVEIEQEEAEEVDEEKVVQIIPQMKLERIPAKVNDKIILLDPMEIHFIETQNGVTHIHVREGDFVCALTLGELEARLTGFGFFRCHRSYLVNLQRVREVITWTRNSFSLILDDERKSSIPLSKGRMDELKGVIGL
>NZ_CP010106.1|WP_000672663.1|5219572_5220592_-|stage-II-sporulation-protein-D
MKFSKPLFITVALLIALVIIVPAALVIPFAKAKVGEETASKTPPAIESIPAPGKVDTAVQVAVYREKQKKVETLPVEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTVKDQVYKSKDELKKQWGNNYENNLKKIEEAVSKTAGQVLTYDGKPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQTFTVADFQKRLGVKVLADGKVGNIKDLTEGKRVKDVAFQGKTLTGKEVREKLDLRSSDFTWKQQGDKIIVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDYEGKLMVKK
>NZ_CP010106.1|WP_000411274.1|5220798_5222103_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MEKIIVRGGKRLNGTVRVEGAKNAVLPIIAAALLASDGKNVLSEVPVLSDVYTINEVLRHLNAEVVFENNQVTIDSSKELNIEAPFEYVRKMRASVQVMGPLLARNGRARIALPGGCAIGSRPIDQHLKGFEAMGAKVQVGNGFVEAYVEGELKGAKIYLDFPSVGATENIMSAATLAKGTTILENAAKEPEIVDLANFLNAMGAKVRGAGTGTIRIEGVDKLYGANHSIIPDRIEAGTFMVAAAITGGDILIENAVPEHLRSITAKMEEMGVKIIEENEGVRVIGPDKLKAVDIKTMPHPGFPTDMQSQMMALLLQADGTSMITETVFENRFMHVEEFRRMNADIKIEGRSVIMNGPNSLQGAEVAATDLRAAAALILAGLVSEGYTRVTELKHLDRGYVNFHKKLAALGATIERVNEKVEEVKEQEVSDLHA
>NZ_CP010106.1|WP_002005985.1|5222142_5222853_-|YwmB-family-TATA-box-binding-protein
MKLKLKAILIVALSVVLFLVGYREMKPISDEQKMESMIKALEKNDAKVEKWSWLARETKTISNIHTFQKLLNDVKEKANIQKWEVEQSPDGYKATSYKKLSSYEERVVVTWSKENTKENTFIIFEVSGAKWDPKYVQNMNKIFSEKPIIYTCVQGVLNDKIEGVLQNKTNQVLKDLSARAIEQVEERAFVSVSAYNKKWDDALSTNREKINVQIAIRSTDNKDTIVVGTPIITSEY
>NZ_CP010106.1|WP_000057889.1|5222898_5223135_-|DUF1146-domain-containing-protein
MAQLLGQQALIAIVSHLLFITITWWALQGIHIERLMKSGKVLQTRVLLILITIAIGTSVSNFFLDYLGYSKSLTYLVK
>NZ_CP010106.1|WP_000367467.1|5223337_5224858_-|NADH-quinone-oxidoreductase-subunit-NuoN
MDMNTLLSLSWHLMVPEFIILGAAILLSICDLFFKLNHRYVAFGAIAAIVLAIVSLITLYSEPAGDILNGSFVLDGFSKGFKTLLLGASALILCTAMSDDKKNPIEDKGEYYYLFLMALLGAMFMASSVDFITLFVGLELLSLSSYILVGIRKKSRASNEAAMKYVISGGIGTAITLFGMSYLYGITGSTNIVDMQKVLTGELASGIQLLLALAFLLLLVGLSFKIATVPFHMWAPDVYEGAATPVTAFLGTISKIAGFLLIIRLFLMVFASVLIQGDMQSLYGHMSIYIAVLASITMIVGNVVALKQYNIKRLFAYSGIAHAGYLLVPLVALSPFTMDSMWFYMLAYMLMNIGAFAIIHGLILQNDEENITIFTGLYKRSPFAAIMMTIFILSLAGIPGTAGFIGKINIFLGALHVEPAHYVLASIMMGTTVVSFVYYFRILQQMFFRTGETEERIRLPLNIKVVMSLCAISIVILGIMPMIGYNFFYEYFPLMKDFFFLGNVVQ
>NZ_CP010106.1|WP_000998931.1|5224859_5226362_-|NADH-quinone-oxidoreductase-subunit-M
MNDLLLTFFIFSPLLGILLLVLTPKKELRTVRALGLFGTALPFGIAIVLACTYASGKNLSLFDEKVKWIKFGDFTAVDKRWFSIYYELGIDGLSLVMMVLTALLAMLAAIAAFSIKRNLKAFYMLLLMLEIGMLGVFAAQNLMLFFIFFEITLPPMFLLIGKWGKLSSEKAAYSYLIYNGIGSAILLIVFSILFAKTGTTNIVELKEILRSVSAEGALVIPSSLQLSVFIAIMIAFAIKLPVFPLHRWMVNVHIEAHPAVVMLHAGVLLKIGAYGIIRFGKGLFPEYFHDVATLIAILGVINLLYGAFLALIQTDFRKVLAYSSISHMGIVLMGLASLNAPGTQGALFQVVSHGLIAALLFFLLGVIEQRFGTSDITVLGGLAKSVPILSGFFLAGGMASLGLPGMSGFVSEFLAFLGLFQGEPVIAAVGVIGIILTAVYVLRATLQVTFGKKEWEAKTDIHGWEYVPVLLLIFCIIAIGVMPEILGDPLQNTLKTLGVK
>NZ_CP010106.1|WP_000568220.1|5226358_5228221_-|NADH-quinone-oxidoreductase-subunit-L
MIDYAWLIPLFPLVSFLLLIIFGKKIREGSSVLSIFFVFLSFILAVLVLIERFSEASVKHKWVWLRAGDVDISFGFEVTALGALMLFIVTLVSLLVHVYSKGYMKGDERLPTFYAYLGLFTFAMLGLVISTNLLQLYIFWELVGLGSFLLIGFYFFKEEAKAAAKKAFIMTRIGDVGLFIGMILIFWYAGSFEYDAIFRAIYTGDLPPYMITITAILIFIGAMGKSGQFPLHTWLPDAMEGPTPVSALIHAATMVAAGVYLVATMFPLFSASTVAMQTVAIVGAFTAIFAASIGLVQTDIKRVLAYSTVSQLGYMMLALGSAGYVAGIFHLTTHAFFKALLFLAAGSVIHAVHTQNINKMGGLQKKMKVTGTLFLIGTLAISGVPLLSGFFSKDEILAATWMNGNYVLFTLAVIAAFLTAFYMFRLYFLVFTGETKTKEEVHESPRVMTYPMIVLGVLAVVAGYINTPWFGTFLGDWLTKDVGFKVEEAHGPVGIMIVATLVSFAGIALAYFIYGKKSISRDWAGGTETSLYNLLKEKYYVDELYNMTVIPITKGIAHVLRLFEVYVVEGIAVLIGSVVKGTSNLGSKLQNGNVQVYGTVTAVSLAVLVIILLYTGGDLR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP010106_3	3.2\|4714294\|18\|NZ_CP010106\|CRT	4714294-4714311	18	NZ_CP010106.1	3255209-3255226	1	0.944

1. spacer 3.2|4714294|18|NZ_CP010106|CRT matches to position: 3255209-3255226, mismatch: 1, identity: 0.944

tgggccttggattccttg	CRISPR spacer
tgggccttgaattccttg	Protospacer
*********.********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP010106_3	3.7\|4714564\|27\|NZ_CP010106\|CRT	4714564-4714590	27	MN694423	Marine virus AFVG_250M1001, complete genome	26259-26285	2	0.926
NZ_CP010106_3	3.4\|4714384\|36\|NZ_CP010106\|CRT	4714384-4714419	36	GU936714	Synechococcus phage S-CBS2, complete genome	39491-39526	3	0.917
NZ_CP010106_5	5.1\|5215740\|31\|NZ_CP010106\|CRISPRCasFinder	5215740-5215770	31	JX238501	Bacillus phage phiAGATE, complete genome	124559-124589	8	0.742
NZ_CP010106_3	3.4\|4714384\|36\|NZ_CP010106\|CRT	4714384-4714419	36	NC_048169	Gordonia phage BrutonGaster, complete genome	17045-17080	9	0.75

1. spacer 3.7|4714564|27|NZ_CP010106|CRT matches to MN694423 (Marine virus AFVG_250M1001, complete genome) position: , mismatch: 2, identity: 0.926

tgggccttgtgccccggttgcccctgt	CRISPR spacer
tgggccttgcgccccagttgcccctgt	Protospacer
*********.*****.***********

2. spacer 3.4|4714384|36|NZ_CP010106|CRT matches to GU936714 (Synechococcus phage S-CBS2, complete genome) position: , mismatch: 3, identity: 0.917

cgggccttgaattccttgcgggccttggattccttg	CRISPR spacer
ctcgccttgaattccttgcgggccttgaattccttg	Protospacer
*  ************************.********

3. spacer 5.1|5215740|31|NZ_CP010106|CRISPRCasFinder matches to JX238501 (Bacillus phage phiAGATE, complete genome) position: , mismatch: 8, identity: 0.742

ttcttcttttttgtcactagttgaaccgctt	CRISPR spacer
ctaaccttttttgccactagttaaaccgccc	Protospacer
.*  .********.********.******..

4. spacer 3.4|4714384|36|NZ_CP010106|CRT matches to NC_048169 (Gordonia phage BrutonGaster, complete genome) position: , mismatch: 9, identity: 0.75

cgggccttgaattccttgcgggccttggattccttg	CRISPR spacer
agggccttgagttccttgcggaccttggcgatgtcg	Protospacer
 *********.**********.******   . *.*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

246772 : 254720

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000917311.1\|246772_247057_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	1.2e-20	54.8
WP_001029993.1\|247095_248730_+	chaperonin GroEL	A0A219YK78	uncultured_virus	1.5e-157	58.0
WP_000743906.1\|249136_250675_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	8.8e-22	31.7
WP_050821493.1\|251060_252386_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.2e-43	29.2
WP_000929887.1\|252529_253231_+	response regulator transcription factor	W8CYM9	Bacillus_phage	7.3e-40	36.4
WP_000719212.1\|253214_254720_+	aminopeptidase AmpS	W8CYF6	Bacillus_phage	1.1e-32	30.7

DBSCAN-SWA_2

298677 : 307053

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000625682.1\|298677_299985_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.9e-21	25.3
WP_001170544.1\|300073_300793_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	4.0e-49	44.3
WP_000278823.1\|300785_301040_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000666787.1\|301036_301720_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_000055565.1\|301703_303923_+	phosphoribosylformylglycinamidine synthase II	A6N228	Microbacterium_phage	2.0e-163	41.2
WP_000879025.1\|303907_305323_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.3e-55	35.4
WP_001262439.1\|305428_306469_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.2e-67	45.9
WP_000088596.1\|306465_307053_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.5e-27	36.4

DBSCAN-SWA_3

1811793 : 1819947

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000755513.1\|1811793_1813080_+	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	3.4e-11	31.5
WP_001194306.1\|1813179_1813944_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000453867.1\|1814184_1815945_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.4e-273	98.2
WP_000612414.1\|1816030_1816708_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.1e-122	99.1
WP_001231622.1\|1816704_1817778_+	HAMP domain-containing sensor histidine kinase	W8CYF6	Bacillus_phage	1.0e-186	97.8
WP_000818985.1\|1818067_1818787_+	3-ketoacyl-ACP reductase	W8CYX9	Bacillus_phage	5.9e-61	100.0
WP_001258503.1\|1819074_1819947_+	aminoglycoside 6-adenylyltransferase	A0A1X9I6F2	Streptococcus_phage	5.6e-66	45.5

DBSCAN-SWA_4

1992522 : 2029721

Bacillus_phage(44.44%)

integrase,tail,portal,terminase,capsid

attL 1990569:1990584|attR 2035630:2035645

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1990569:1990584	attL	NA	NA	NA	NA
WP_000427801.1\|1992522_1992798_+	stage V sporulation protein S	J9PTX7	Bacillus_phage	2.9e-08	41.2
WP_000478848.1\|1992995_1993259_+	hypothetical protein	A0A218KBU4	Bacillus_phage	3.4e-06	38.9
WP_000456233.1\|1993906_1994254_-	YolD-like family protein	A0A2H4JEH6	uncultured_Caudovirales_phage	3.0e-10	27.5
WP_000109862.1\|1994440_1995514_+	tetratricopeptide repeat protein	A0A2H4J8G3	uncultured_Caudovirales_phage	6.9e-74	42.0
WP_000709202.1\|1995510_1995636_+	hypothetical protein	NA	NA	NA	NA
WP_050821774.1\|1996060_1997197_-\|integrase	tyrosine-type recombinase/integrase	A0A1B0T6A8	Bacillus_phage	8.1e-65	40.5
WP_050821775.1\|1997217_1997736_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	4.0e-27	39.9
WP_050821776.1\|1998120_1998786_-	hypothetical protein	NA	NA	NA	NA
WP_050821777.1\|1998830_1999823_-	hypothetical protein	NA	NA	NA	NA
WP_050821778.1\|1999965_2000319_-	helix-turn-helix transcriptional regulator	A0A0P0IZG9	Lactobacillus_phage	2.5e-12	37.4
WP_050821779.1\|2000469_2000694_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_050821780.1\|2000716_2001016_+	DNA-binding protein	A0A2H4JDL0	uncultured_Caudovirales_phage	4.1e-08	34.9
WP_050821781.1\|2001083_2001599_+	helix-turn-helix transcriptional regulator	A0A290FZK9	Caldibacillus_phage	6.8e-11	24.7
WP_000151148.1\|2001629_2001851_+	hypothetical protein	NA	NA	NA	NA
WP_050821782.1\|2002029_2002314_+	hypothetical protein	D2XR42	Bacillus_phage	7.0e-26	57.4
WP_050821783.1\|2002431_2003415_+	DnaD domain protein	A6M985	Geobacillus_virus	5.2e-52	46.9
WP_001125988.1\|2003425_2003788_+	hypothetical protein	D2XR47	Bacillus_phage	1.4e-47	75.8
WP_050821784.1\|2003859_2004051_+	DUF3954 domain-containing protein	D2XR48	Bacillus_phage	2.4e-14	65.1
WP_080989184.1\|2004119_2005703_-	exosporium leader peptide-containing protein	A0A288WFW9	Bacillus_phage	1.8e-06	89.7
WP_001163834.1\|2006509_2007082_-	cupin domain-containing protein	Q2Q459	Bacillus_phage	4.3e-91	85.8
WP_050821785.1\|2008203_2009520_-	collagen-like protein	A0A285PWR0	Cedratvirus	4.4e-38	62.6
WP_050821787.1\|2011091_2011574_+	ArpU family transcriptional regulator	H0USV3	Bacillus_phage	8.5e-72	83.1
WP_050821788.1\|2011573_2012116_+\|integrase	site-specific integrase	W8CYP1	Bacillus_phage	3.4e-85	87.2
WP_016117709.1\|2012329_2013280_+	nucleoside hydrolase	NA	NA	NA	NA
WP_050821789.1\|2014091_2015261_+	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	1.6e-23	28.9
WP_000930969.1\|2015602_2015821_+	hypothetical protein	H0USV5	Bacillus_phage	5.2e-21	66.2
WP_001068927.1\|2016255_2016462_-	hypothetical protein	NA	NA	NA	NA
WP_000418198.1\|2016730_2017135_+	hypothetical protein	NA	NA	NA	NA
WP_000244508.1\|2017134_2017350_+	hypothetical protein	NA	NA	NA	NA
WP_000576169.1\|2017509_2018082_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.4e-41	48.3
WP_000390790.1\|2018133_2018313_+	hypothetical protein	NA	NA	NA	NA
WP_050821790.1\|2018334_2019195_+\|terminase	terminase	A0A0A8WJN3	Clostridium_phage	3.8e-30	45.6
WP_000072122.1\|2019187_2020594_+	DEAD/DEAH box helicase family protein	A0A0A8WEW2	Clostridium_phage	2.0e-169	63.7
WP_050821791.1\|2020661_2022137_+\|portal	phage portal protein	NA	NA	NA	NA
WP_000496054.1\|2022250_2022769_+\|capsid	minor capsid protein	Q1WDG7	Streptomyces_phage	8.4e-09	34.4
WP_050821792.1\|2022871_2024077_+	hypothetical protein	A0A1B1IMM2	Lactococcus_phage	3.1e-38	33.8
WP_050821793.1\|2024092_2025079_+	XkdG	H7BVA6	unidentified_phage	4.3e-70	44.2
WP_000869887.1\|2025249_2025414_+	hypothetical protein	NA	NA	NA	NA
WP_050821794.1\|2025413_2025950_+	hypothetical protein	NA	NA	NA	NA
WP_050821795.1\|2025946_2026318_+	hypothetical protein	NA	NA	NA	NA
WP_000024034.1\|2026324_2026735_+	hypothetical protein	NA	NA	NA	NA
WP_050821796.1\|2026738_2027161_+	hypothetical protein	NA	NA	NA	NA
WP_000118571.1\|2027173_2027776_+	hypothetical protein	NA	NA	NA	NA
WP_050821797.1\|2027833_2028364_+	hypothetical protein	NA	NA	NA	NA
WP_050821798.1\|2028315_2028750_+	hypothetical protein	NA	NA	NA	NA
WP_050821799.1\|2028782_2029721_+\|tail	phage tail tape measure protein	A0A1C8E982	Bacillus_phage	5.3e-70	65.8
2035630:2035645	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2317809 : 2355583

Bacillus_phage(69.23%)

portal,tail,terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000843025.1\|2317809_2318091_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	3.0e-13	59.0
WP_050821837.1\|2318092_2318290_+	hypothetical protein	A0A1L2JY50	Aeribacillus_phage	3.9e-07	48.3
WP_145974768.1\|2318286_2318484_+	hypothetical protein	NA	NA	NA	NA
WP_050821838.1\|2318491_2319217_-	hypothetical protein	NA	NA	NA	NA
WP_050821839.1\|2319340_2319523_+	hypothetical protein	A0A1B1P7M4	Bacillus_phage	3.7e-12	64.0
WP_050821840.1\|2319512_2319863_+	hypothetical protein	NA	NA	NA	NA
WP_050821841.1\|2320097_2320478_+	hypothetical protein	NA	NA	NA	NA
WP_050821842.1\|2320884_2321445_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	3.3e-43	51.6
WP_050821843.1\|2321657_2322095_+	hypothetical protein	NA	NA	NA	NA
WP_001086032.1\|2322226_2322655_+	hypothetical protein	A0A2H4J6Z8	uncultured_Caudovirales_phage	1.2e-32	51.1
WP_050821844.1\|2322671_2324387_+\|terminase	phage terminase large subunit	A0A142F1L6	Bacillus_phage	2.1e-149	52.5
WP_050821845.1\|2324403_2325921_+\|portal	phage portal protein	A0A142F1L7	Bacillus_phage	8.9e-67	30.0
WP_050821846.1\|2325979_2326759_+	scaffolding protein	Q4ZC70	Staphylococcus_virus	1.6e-08	40.0
WP_001145078.1\|2326819_2327944_+	DUF5309 family protein	NA	NA	NA	NA
WP_000027967.1\|2327993_2328218_+	hypothetical protein	NA	NA	NA	NA
WP_000868477.1\|2328247_2328589_+	hypothetical protein	NA	NA	NA	NA
WP_050821847.1\|2328593_2329400_+	hypothetical protein	NA	NA	NA	NA
WP_000954644.1\|2329403_2329778_+	hypothetical protein	NA	NA	NA	NA
WP_050821848.1\|2329777_2330137_+	hypothetical protein	NA	NA	NA	NA
WP_000930922.1\|2330139_2330547_+	hypothetical protein	NA	NA	NA	NA
WP_050821849.1\|2330560_2331067_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_050821850.1\|2331090_2331450_+	hypothetical protein	A0A0A7AQ61	Bacillus_phage	2.2e-40	85.7
WP_000762691.1\|2331436_2331652_+	hypothetical protein	H0USV9	Bacillus_phage	2.3e-29	97.1
WP_000818630.1\|2331719_2332097_+	hypothetical protein	NA	NA	NA	NA
WP_000931848.1\|2332186_2332441_+	hypothetical protein	NA	NA	NA	NA
WP_050822201.1\|2332477_2336374_+\|tail	phage tail tape measure protein	A6M961	Geobacillus_virus	5.5e-12	48.8
WP_050821851.1\|2336388_2337873_+\|tail	phage tail protein	A0A0A7AQV1	Bacillus_phage	2.2e-139	54.4
WP_050821852.1\|2337869_2342186_+	hypothetical protein	A0A0S2MVB4	Bacillus_phage	0.0e+00	56.7
WP_016123141.1\|2342197_2342566_+	hypothetical protein	A0A0S2MVE0	Bacillus_phage	2.0e-41	73.5
WP_050821853.1\|2342603_2342888_+	hypothetical protein	NA	NA	NA	NA
WP_050821854.1\|2342902_2343133_+\|holin	phage holin	A0A0S2MVE8	Bacillus_phage	6.9e-32	92.1
WP_050821855.1\|2343149_2343860_+	N-acetylmuramoyl-L-alanine amidase family protein	A0A0S2MVR5	Bacillus_phage	1.9e-88	95.1
WP_050821856.1\|2343946_2345608_-	hypothetical protein	A0A1S5SA14	Streptococcus_phage	1.5e-30	29.7
WP_050821857.1\|2345680_2346007_-	hypothetical protein	A0A0S2GLG3	Bacillus_phage	8.7e-20	47.2
WP_050821858.1\|2346083_2346350_-	helix-turn-helix transcriptional regulator	A0A288WFZ7	Bacillus_phage	1.2e-19	60.5
WP_118043470.1\|2346504_2346627_+	DUF3961 domain-containing protein	Q3HKZ4	Bacillus_phage	2.0e-09	67.6
WP_044797551.1\|2347269_2347461_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_050821859.1\|2347625_2347892_+	hypothetical protein	NA	NA	NA	NA
WP_050821860.1\|2347891_2348194_+	hypothetical protein	A0A288WG08	Bacillus_phage	4.0e-27	57.1
WP_050821861.1\|2348190_2348373_+	hypothetical protein	Q2I8E2	Bacillus_phage	1.5e-21	88.3
WP_044797546.1\|2348488_2349673_+	cell division protein FtsK	A0A288WFS1	Bacillus_phage	1.8e-139	62.4
WP_050821862.1\|2349614_2350235_+	hypothetical protein	H0USY2	Bacillus_phage	8.6e-93	79.8
WP_050821863.1\|2350340_2350808_+	hypothetical protein	NA	NA	NA	NA
WP_044797544.1\|2351150_2352614_+	recombinase family protein	A0A288WFZ3	Bacillus_phage	1.5e-135	50.5
WP_050821864.1\|2352619_2352913_-	DUF1232 domain-containing protein	NA	NA	NA	NA
WP_000691162.1\|2353159_2353846_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_002098415.1\|2354218_2355583_+	DEAD/DEAH box helicase	A0A1V0SIR5	Klosneuvirus	5.2e-58	36.6

DBSCAN-SWA_6

3461472 : 3476368

Bacillus_phage(80.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050822035.1\|3461472_3463056_-	hypothetical protein	A7KUT6	Bacillus_phage	4.2e-27	25.6
WP_001232162.1\|3463071_3463872_-	hypothetical protein	NA	NA	NA	NA
WP_000861690.1\|3463871_3464360_-	hypothetical protein	A7KUS4	Bacillus_phage	7.9e-09	41.2
WP_001001211.1\|3464363_3464933_-	hypothetical protein	NA	NA	NA	NA
WP_001010565.1\|3464947_3465313_-	hypothetical protein	NA	NA	NA	NA
WP_000224635.1\|3465543_3466872_-	M23 family metallopeptidase	A0A1D8EVX2	Mycobacterium_phage	8.5e-13	43.1
WP_000057446.1\|3466846_3468907_-	transglycosylase SLT domain-containing protein	A7KUS1	Bacillus_phage	2.1e-18	37.6
WP_050822036.1\|3469006_3476368_-	hypothetical protein	A7KUS1	Bacillus_phage	2.3e-27	35.6

DBSCAN-SWA_7

3764494 : 3884104

109

Bacillus_phage(52.0%)

integrase,tail,protease,coat,portal,terminase,head,tRNA,holin,capsid

attL 3787814:3787831|attR 3883351:3883368

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000878485.1\|3764494_3764851_-\|holin	CidA/LrgA family holin-like protein	NA	NA	NA	NA
WP_000454968.1\|3764884_3766318_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_000006451.1\|3766504_3766696_-	hypothetical protein	NA	NA	NA	NA
WP_001274917.1\|3766915_3767623_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001212117.1\|3767653_3769063_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	7.3e-55	29.8
WP_000066293.1\|3769254_3770244_-	phosphatidylinositol diacylglycerol-lyase	NA	NA	NA	NA
WP_000689190.1\|3770423_3772265_-	peptidase	NA	NA	NA	NA
WP_000771177.1\|3772556_3773354_+	LysM peptidoglycan-binding domain-containing protein	A0A172JHR8	Bacillus_phage	1.6e-35	39.0
WP_000272402.1\|3773619_3774957_+	NAD(P)-binding protein	NA	NA	NA	NA
WP_000791024.1\|3775460_3777380_+	LTA synthase family protein	W6LM83	Streptococcus_phage	2.1e-97	37.5
WP_001235304.1\|3777426_3780210_-	GTP-binding protein	NA	NA	NA	NA
WP_000461138.1\|3780714_3780900_+	hypothetical protein	NA	NA	NA	NA
WP_000516465.1\|3781163_3783107_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	1.3e-62	29.6
WP_000196029.1\|3783115_3785788_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	7.9e-34	24.5
WP_001288799.1\|3785967_3786510_-\|coat	outer spore coat protein CotE	NA	NA	NA	NA
WP_000870461.1\|3786635_3787067_-	hypothetical protein	NA	NA	NA	NA
WP_001005375.1\|3787070_3788600_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
3787814:3787831	attL	NA	NA	NA	NA
WP_050822059.1\|3788975_3789851_-	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_000625417.1\|3789837_3791595_-	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA
WP_000688036.1\|3791819_3792743_-	membrane dipeptidase	NA	NA	NA	NA
WP_000404341.1\|3792801_3793062_-	stage V sporulation protein SpoVS	J9PTX7	Bacillus_phage	8.4e-10	43.8
WP_001221095.1\|3793211_3794006_-	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_000099770.1\|3794168_3795734_-	ribonuclease Y	NA	NA	NA	NA
WP_001115373.1\|3796214_3796640_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.7e-45	68.9
WP_000990696.1\|3797715_3798954_-	competence/damage-inducible protein CinA	NA	NA	NA	NA
WP_001052967.1\|3798974_3799553_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000137459.1\|3799617_3800544_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000574107.1\|3800565_3801351_-	DUF3388 domain-containing protein	NA	NA	NA	NA
WP_000114450.1\|3801489_3801738_-	DUF3243 domain-containing protein	NA	NA	NA	NA
WP_000761056.1\|3801813_3802527_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000411984.1\|3802627_3803914_-	insulinase family protein	A0A2H4UVM3	Bodo_saltans_virus	1.7e-10	28.9
WP_050822060.1\|3803914_3805189_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	9.2e-57	30.1
WP_000008857.1\|3805398_3806358_-	ABC transporter permease	NA	NA	NA	NA
WP_001085254.1\|3806358_3807417_-	ABC transporter permease	NA	NA	NA	NA
WP_000456907.1\|3807409_3808942_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.8e-12	26.6
WP_000725762.1\|3809059_3810136_-	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000114182.1\|3810228_3810954_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001118776.1\|3811491_3813873_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.0e-89	51.4
WP_000605020.1\|3814085_3814289_-	ribonuclease	NA	NA	NA	NA
WP_000139806.1\|3814285_3815035_-	translocation-enhancing protein TepA	NA	NA	NA	NA
WP_000823096.1\|3815136_3816807_-	ribonuclease J	NA	NA	NA	NA
WP_000564763.1\|3817543_3818422_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_000692451.1\|3818433_3819666_-	aspartate kinase	NA	NA	NA	NA
WP_000414846.1\|3819689_3820736_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_086424262.1\|3820886_3821123_-	dipicolinate synthase	NA	NA	NA	NA
WP_050822061.1\|3821312_3823031_+	hypothetical protein	NA	NA	NA	NA
WP_000050864.1\|3823045_3823534_+	hypothetical protein	NA	NA	NA	NA
WP_050822062.1\|3824037_3824748_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A0S2MVR5	Bacillus_phage	5.0e-89	95.7
WP_000373869.1\|3824747_3825173_-\|holin	phage holin family protein	A0A1B1P787	Bacillus_phage	9.7e-72	99.3
WP_050822063.1\|3825188_3826148_-\|integrase	tyrosine-type recombinase/integrase	I7IDI7	Bacillus_phage	1.4e-174	95.3
WP_050822064.1\|3826249_3826621_-	hypothetical protein	A0A0S2MVE0	Bacillus_phage	1.6e-33	58.3
WP_050822065.1\|3826636_3830998_-	hypothetical protein	A0A0S2MVB4	Bacillus_phage	0.0e+00	50.6
WP_050822066.1\|3830994_3832458_-\|tail	phage tail family protein	A0A0S2MV63	Bacillus_phage	2.0e-164	58.3
WP_050822067.1\|3832499_3834914_-\|tail	phage tail tape measure protein	A0A2H4JC82	uncultured_Caudovirales_phage	2.5e-164	87.9
WP_050822068.1\|3835168_3836380_-	hypothetical protein	A0A2H4JAI2	uncultured_Caudovirales_phage	6.0e-199	91.6
WP_050822069.1\|3836610_3836973_-	hypothetical protein	A0A2H4JAG8	uncultured_Caudovirales_phage	4.6e-54	85.8
WP_001004914.1\|3836977_3837565_-\|tail	phage tail protein	A0A2H4JDV4	uncultured_Caudovirales_phage	3.3e-86	81.0
WP_050822070.1\|3837565_3837895_-	hypothetical protein	D2XR22	Bacillus_phage	2.7e-53	94.5
WP_000997567.1\|3837894_3838236_-	HK97 gp10 family phage protein	D2XR21	Bacillus_phage	4.3e-54	95.6
WP_001247277.1\|3838237_3838591_-\|head	phage head closure protein	A0A2H4JGG7	uncultured_Caudovirales_phage	8.7e-58	94.8
WP_050822071.1\|3838592_3838886_-	hypothetical protein	D2XR19	Bacillus_phage	1.0e-43	90.7
WP_050822072.1\|3838898_3840062_-\|capsid	phage major capsid protein	A0A2H4JH29	uncultured_Caudovirales_phage	7.3e-186	84.8
WP_050822073.1\|3840082_3840859_-\|protease	Clp protease ClpP	A0A0A7RWX3	Clostridium_phage	5.6e-57	57.7
WP_050822216.1\|3840842_3841949_-\|portal	phage portal protein	A0A2H4JAJ1	uncultured_Caudovirales_phage	1.7e-184	88.8
WP_050822074.1\|3842015_3843674_-\|terminase	terminase large subunit	A0A2H4JHE9	uncultured_Caudovirales_phage	7.8e-258	79.3
WP_000124846.1\|3843670_3844006_-	hypothetical protein	A0A1B1P762	Bacillus_phage	3.0e-07	31.2
WP_050822075.1\|3844157_3844493_-	HNH endonuclease	D2XR61	Bacillus_phage	6.1e-53	91.0
WP_153601825.1\|3844781_3844958_-	hypothetical protein	NA	NA	NA	NA
WP_050822076.1\|3844991_3846101_-	serine/threonine protein kinase	B0FEC2	Escherichia_phage	1.3e-51	34.1
WP_050822077.1\|3846049_3846553_-	hypothetical protein	NA	NA	NA	NA
WP_050822078.1\|3846808_3847453_-	hypothetical protein	NA	NA	NA	NA
WP_000434821.1\|3848068_3848269_+	cold-shock protein	Q9AZD3	Lactococcus_phage	2.4e-20	71.2
WP_050822079.1\|3848390_3848933_-\|integrase	site-specific integrase	W8CYP1	Bacillus_phage	5.0e-89	91.7
WP_050822080.1\|3848932_3849397_-	ArpU family transcriptional regulator	D2XR57	Bacillus_phage	3.0e-74	92.9
WP_050822082.1\|3850944_3851223_-	hypothetical protein	NA	NA	NA	NA
WP_050822083.1\|3852308_3852716_+	DUF4870 domain-containing protein	NA	NA	NA	NA
WP_016077319.1\|3852824_3853016_-	DUF3954 domain-containing protein	D2XR48	Bacillus_phage	1.1e-14	63.5
WP_050822084.1\|3853088_3853451_-	hypothetical protein	D2XR47	Bacillus_phage	1.1e-55	89.2
WP_050822085.1\|3853425_3853614_-	hypothetical protein	D2XR45	Bacillus_phage	2.8e-15	83.6
WP_050822086.1\|3853616_3854939_-	replicative DNA helicase	D2XR44	Bacillus_phage	4.6e-237	95.5
WP_050822087.1\|3854935_3855886_-	DnaD domain protein	D2XR43	Bacillus_phage	6.1e-74	60.5
WP_050822088.1\|3856165_3856450_-	hypothetical protein	D2XR42	Bacillus_phage	5.6e-23	54.3
WP_000215310.1\|3856630_3856852_-	hypothetical protein	NA	NA	NA	NA
WP_050822089.1\|3856865_3857453_-	hypothetical protein	D2XR41	Bacillus_phage	8.4e-74	68.7
WP_050822090.1\|3857543_3857792_-	hypothetical protein	NA	NA	NA	NA
WP_050822091.1\|3857846_3858035_-	helix-turn-helix transcriptional regulator	A0A2H4J4N8	uncultured_Caudovirales_phage	9.4e-11	54.2
WP_050822092.1\|3858190_3858625_+	helix-turn-helix transcriptional regulator	D2XR39	Bacillus_phage	2.5e-30	54.6
WP_050822093.1\|3858637_3859066_+	ImmA/IrrE family metallo-endopeptidase	D2XR38	Bacillus_phage	4.6e-61	80.3
WP_050822094.1\|3859108_3859996_+	hypothetical protein	A0A1C8E993	Bacillus_phage	2.8e-52	67.4
WP_050822095.1\|3860067_3860703_+	hypothetical protein	NA	NA	NA	NA
WP_050822096.1\|3860832_3862380_+	recombinase family protein	I3VYZ3	Thermoanaerobacterium_phage	3.0e-142	53.4
WP_000954735.1\|3862834_3863737_-	dipicolinic acid synthetase subunit A	NA	NA	NA	NA
WP_001239756.1\|3863907_3864159_-	YlmC/YmxH family sporulation protein	NA	NA	NA	NA
WP_000592989.1\|3864293_3865535_-	insulinase family protein	G3MBJ8	Bacillus_virus	4.4e-56	34.5
WP_000868232.1\|3865621_3866521_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_000076754.1\|3866675_3868814_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_001229392.1\|3868974_3869244_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_000766702.1\|3869344_3870316_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_000399348.1\|3870359_3871283_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_000776437.1\|3871369_3871726_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_000582363.1\|3871741_3872023_-	DUF503 family protein	NA	NA	NA	NA
WP_000036343.1\|3872019_3874080_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	3.8e-20	25.9
WP_001286524.1\|3874084_3874396_-	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_000071127.1\|3874396_3874669_-	YlxR family protein	NA	NA	NA	NA
WP_000102604.1\|3874680_3875787_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_000359096.1\|3875804_3876275_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_000060005.1\|3876611_3880913_-	PolC-type DNA polymerase III	A0A0A8WJ41	Clostridium_phage	4.1e-24	39.6
WP_000814315.1\|3881037_3882738_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_001090243.1\|3882847_3884104_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
3883351:3883368	attR	NA	NA	NA	NA

DBSCAN-SWA_8

4532678 : 4540364

Staphylococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000221067.1\|4532678_4533602_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-45	43.5
WP_000609141.1\|4533727_4534663_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.2e-21	24.8
WP_000018029.1\|4534664_4535357_-	response regulator transcription factor	B5LWA6	Feldmannia_species_virus	1.4e-06	28.8
WP_001014310.1\|4535699_4535894_+	YwbE family protein	NA	NA	NA	NA
WP_050822116.1\|4535932_4537132_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	9.5e-72	41.2
WP_000587818.1\|4537427_4537751_+	heme oxygenase	NA	NA	NA	NA
WP_048533848.1\|4537823_4538588_-	class B sortase	NA	NA	NA	NA
WP_050822117.1\|4538620_4539391_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	9.9e-14	28.6
WP_003310941.1\|4539380_4540364_-	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	6.5e-18	26.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_CP010112

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

252174 : 261098

Bacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050822710.1\|252174_253938_-	sulfate permease	A0A2H4J153	uncultured_Caudovirales_phage	2.2e-37	25.0
WP_050822713.1\|254038_254479_-	hypothetical protein	NA	NA	NA	NA
WP_050822714.1\|254468_254831_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_050822715.1\|256129_256531_+	hypothetical protein	NA	NA	NA	NA
WP_050822716.1\|256769_257882_-	helix-turn-helix domain-containing protein	A0A288TXV8	Enterococcus_phage	1.5e-79	47.4
WP_050822719.1\|257893_258292_-\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	5.8e-50	66.7
WP_050822722.1\|259123_259318_+	hypothetical protein	W8CYN5	Bacillus_phage	7.9e-13	54.7
WP_050822724.1\|259330_260497_+	DNA translocase FtsK	W8CYG2	Bacillus_phage	2.4e-189	83.2
WP_050822726.1\|260486_261098_+	hypothetical protein	W8CZ47	Bacillus_phage	4.5e-86	74.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage