CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007442	Escherichia coli ACN001 chromosome, complete genome	6 crisprs	DinG,cas3,c2c9_V-U4,DEDDh,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	0	19	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007442_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007442_1

67153-67268

Orphan

Consensus_repeat	Method
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007442_1

>merge|NZ_CP007442|1|67153-67268|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAAACACAGCGCGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTT

>NZ_CP007442|1|1|67153-67268|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	GAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAAACACAGCGCGTAGGCCA
GATAAGACGCGTCAGCGTCGCATCAGGCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007442.1\|WP_000951786.1\|68800_70501_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP007442.1\|WP_000637846.1\|78073_79252_+\|sugar-efflux-transporter-SetA	unknown	unknown	gnl\|CDD\|129977
NZ_CP007442.1\|WP_001248770.1\|77840_77972_+\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
NZ_CP007442.1\|WP_001297366.1\|76096_77752_-\|DNA-binding-transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
NZ_CP007442.1\|WP_001117011.1\|60895_63802_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP007442.1\|WP_000035637.1\|63966_66318_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP007442.1\|WP_001200579.1\|59292_60108_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP007442.1\|WP_001065381.1\|53537_54359_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP007442.1\|WP_000241271.1\|54355_55345_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP007442.1\|WP_000610901.1\|53157_53535_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP007442.1\|WP_000525176.1\|60224_60884_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP007442.1\|WP_000746150.1\|56683_59038_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP007442.1\|WP_001300811.1\|70839_71718_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP007442.1\|WP_048943103.1\|71803_72568_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP007442.1\|WP_000916291.1\|72681_73380_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
NZ_CP007442.1\|WP_000800453.1\|55344_56631_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP007442.1\|WP_000888642.1\|66392_67088_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP007442.1\|WP_001295536.1\|74949_75933_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
NZ_CP007442.1\|WP_000151734.1\|67287_68790_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP007442.1\|WP_000235714.1\|73363_74974_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853

Protein	Function_ID	Function_description	E-value
NZ_CP007442.1\|WP_000951786.1\|68800_70501_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP007442.1\|WP_000637846.1\|78073_79252_+\|sugar-efflux-transporter-SetA	gnl\|CDD\|129977	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP007442.1\|WP_001248770.1\|77840_77972_+\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00206924
NZ_CP007442.1\|WP_001297366.1\|76096_77752_-\|DNA-binding-transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
NZ_CP007442.1\|WP_001117011.1\|60895_63802_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP007442.1\|WP_000035637.1\|63966_66318_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP007442.1\|WP_001200579.1\|59292_60108_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.49529e-169
NZ_CP007442.1\|WP_001065381.1\|53537_54359_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.76119e-148
NZ_CP007442.1\|WP_000241271.1\|54355_55345_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP007442.1\|WP_000610901.1\|53157_53535_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
NZ_CP007442.1\|WP_000525176.1\|60224_60884_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	1.37214e-159
NZ_CP007442.1\|WP_000746150.1\|56683_59038_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP007442.1\|WP_001300811.1\|70839_71718_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP007442.1\|WP_048943103.1\|71803_72568_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	6.26224e-49
NZ_CP007442.1\|WP_000916291.1\|72681_73380_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	1.49788e-164
NZ_CP007442.1\|WP_000800453.1\|55344_56631_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP007442.1\|WP_000888642.1\|66392_67088_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	1.31794e-177
NZ_CP007442.1\|WP_001295536.1\|74949_75933_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
NZ_CP007442.1\|WP_000151734.1\|67287_68790_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP007442.1\|WP_000235714.1\|73363_74974_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0

>NZ_CP007442.1|WP_000888642.1|66392_67088_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRLVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIATGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP007442.1|WP_000035637.1|63966_66318_-|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDIRNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYIRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>NZ_CP007442.1|WP_001117011.1|60895_63802_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>NZ_CP007442.1|WP_000525176.1|60224_60884_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
>NZ_CP007442.1|WP_001200579.1|59292_60108_+|co-chaperone-DjlA
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>NZ_CP007442.1|WP_000746150.1|56683_59038_-|LPS-assembly-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNSL
>NZ_CP007442.1|WP_000800453.1|55344_56631_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>NZ_CP007442.1|WP_000241271.1|54355_55345_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRTYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPLLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>NZ_CP007442.1|WP_001065381.1|53537_54359_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES
>NZ_CP007442.1|WP_000610901.1|53157_53535_-|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
>NZ_CP007442.1|WP_000151734.1|67287_68790_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR
>NZ_CP007442.1|WP_000951786.1|68800_70501_-|ribulokinase
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDTTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPCSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
>NZ_CP007442.1|WP_001300811.1|70839_71718_+|arabinose-operon-transcriptional-regulator-AraC
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>NZ_CP007442.1|WP_048943103.1|71803_72568_+|DedA-family-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHLLMPVYIDILRKVVGG
>NZ_CP007442.1|WP_000916291.1|72681_73380_-|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTNELLSGKASASALLGITG
>NZ_CP007442.1|WP_000235714.1|73363_74974_-|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLKWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
>NZ_CP007442.1|WP_001295536.1|74949_75933_-|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>NZ_CP007442.1|WP_001297366.1|76096_77752_-|DNA-binding-transcriptional-regulator-SgrR
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNTTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
>NZ_CP007442.1|WP_001248770.1|77840_77972_+|glucose-uptake-inhibitor-SgrT
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES
>NZ_CP007442.1|WP_000637846.1|78073_79252_+|sugar-efflux-transporter-SetA
MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007442_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007442_2

252732-252885

Orphan

Consensus_repeat	Method
CGCGTCTTATCATGCCTACAAACCTGTGCCGGATCGGTAGGCCGGATAAGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007442_2

>merge|NZ_CP007442|2|252732-252885|CRISPRCasFinder
CGCGTCTTATCATGCCTACAAACCTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCGGTTATGCGCAGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAACCTGTGCTGGATCGGTAGGCCGGATAAGGCG

>NZ_CP007442|2|2|252732-252885|CRISPRCasFinder
CGCGTCTTATCATGCCTACAAACCTGTGCCGGATCGGTAGGCCGGATAAGGCG	TTTACGCCGCATCCGGCGGTTATGCGCAGATGCCTGATGCGACGCTGA
CGCGTCTTATCATGCCTACAAACCTGTGCTGGATCGGTAGGCCGGATAAGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007442.1\|WP_000009291.1\|251270_252029_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP007442.1\|WP_000532698.1\|245516_245990_+\|C-lysozyme-inhibitor	unknown	unknown	gnl\|CDD\|182187
NZ_CP007442.1\|WP_001284199.1\|239176_239659_-\|Hcp-family-type-VI-secretion-system-effector	unknown	unknown	gnl\|CDD\|213799
NZ_CP007442.1\|WP_000749881.1\|262003_263059_-\|phosphoporin-PhoE	unknown	unknown	gnl\|CDD\|182275
NZ_CP007442.1\|WP_001295202.1\|257370_257637_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181972
NZ_CP007442.1\|WP_000189539.1\|260261_261506_+\|esterase-FrsA	unknown	unknown	gnl\|CDD\|235337
NZ_CP007442.1\|WP_001226155.1\|255559_256615_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP007442.1\|WP_000952760.1\|253019_254759_-\|flagellar-type-III-secretion-system-protein-FlhA	unknown	unknown	gnl\|CDD\|224217
NZ_CP007442.1\|WP_001291992.1\|259711_260170_+\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
NZ_CP007442.1\|WP_000207589.1\|254703_255489_+\|putative-lateral-flagellar-export/assembly-protein-LafU	unknown	unknown	gnl\|CDD\|235860
NZ_CP007442.1\|WP_000284050.1\|248716_249295_+\|D-sedoheptulose-7-phosphate-isomerase	unknown	unknown	gnl\|CDD\|179012
NZ_CP007442.1\|WP_001118055.1\|244592_245363_-\|2-oxoglutaramate-amidase	unknown	unknown	gnl\|CDD\|182461
NZ_CP007442.1\|WP_000006256.1\|252204_252702_+\|REP-associated-tyrosine-transposase-RayT	unknown	unknown	gnl\|CDD\|224854
NZ_CP007442.1\|WP_000333380.1\|249500_250268_+\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525
NZ_CP007442.1\|WP_001059874.1\|256611_257064_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182099
NZ_CP007442.1\|WP_000973090.1\|246032_248477_-\|acyl-CoA-dehydrogenase-FadE	unknown	unknown	gnl\|CDD\|236528
NZ_CP007442.1\|WP_000174677.1\|261563_261965_+\|sigma-factor-binding-protein-Crl	unknown	unknown	gnl\|CDD\|182882
NZ_CP007442.1\|WP_000978828.1\|242704_243154_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007442.1\|WP_001293003.1\|257993_259451_-\|cytosol-nonspecific-dipeptidase	unknown	unknown	gnl\|CDD\|184986
NZ_CP007442.1\|WP_001225679.1\|250238_250979_-\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577

Protein	Function_ID	Function_description	E-value
NZ_CP007442.1\|WP_000009291.1\|251270_252029_+\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	3.3314e-41
NZ_CP007442.1\|WP_000532698.1\|245516_245990_+\|C-lysozyme-inhibitor	gnl\|CDD\|182187	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional.	9.39999e-93
NZ_CP007442.1\|WP_001284199.1\|239176_239659_-\|Hcp-family-type-VI-secretion-system-effector	gnl\|CDD\|213799	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family. This family includes Hcp1 (hemolysin coregulated protein 1), an exported, homohexameric ring-forming virulence protein from Pseudomonas aeruginosa. Hcp1 lacks a conventional signal sequence and is instead exported by means of the type VI secretion system, encoded by a pathogenicity cluster of a class previously designated IAHP (IcmF-associated homologous protein). Homologs of Hcp1, in this protein family, are found in various bacteria of which most but not all are known pathogens. Pathogens may have many multiple members of this family, with three to ten in Erwinia carotovora, Yersinia pestis, uropathogenic Escherichia coli, and the insect pathogen Photorhabdus luminescens. [Cellular processes, Pathogenesis].	2.49397e-78
NZ_CP007442.1\|WP_000749881.1\|262003_263059_-\|phosphoporin-PhoE	gnl\|CDD\|182275	PRK10159, PRK10159, phosphoporin PhoE.	0
NZ_CP007442.1\|WP_001295202.1\|257370_257637_+\|hypothetical-protein	gnl\|CDD\|181972	PRK09588, PRK09588, hypothetical protein; Reviewed.	1.93527e-42
NZ_CP007442.1\|WP_000189539.1\|260261_261506_+\|esterase-FrsA	gnl\|CDD\|235337	PRK05077, frsA, esterase FrsA.	0
NZ_CP007442.1\|WP_001226155.1\|255559_256615_+\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP007442.1\|WP_000952760.1\|253019_254759_-\|flagellar-type-III-secretion-system-protein-FlhA	gnl\|CDD\|224217	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP007442.1\|WP_001291992.1\|259711_260170_+\|xanthine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	5.05624e-113
NZ_CP007442.1\|WP_000207589.1\|254703_255489_+\|putative-lateral-flagellar-export/assembly-protein-LafU	gnl\|CDD\|235860	PRK06778, PRK06778, hypothetical protein; Validated.	5.17999e-173
NZ_CP007442.1\|WP_000284050.1\|248716_249295_+\|D-sedoheptulose-7-phosphate-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	1.61173e-142
NZ_CP007442.1\|WP_001118055.1\|244592_245363_-\|2-oxoglutaramate-amidase	gnl\|CDD\|182461	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional.	0
NZ_CP007442.1\|WP_000006256.1\|252204_252702_+\|REP-associated-tyrosine-transposase-RayT	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	7.32036e-43
NZ_CP007442.1\|WP_000333380.1\|249500_250268_+\|class-II-glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	8.29603e-146
NZ_CP007442.1\|WP_001059874.1\|256611_257064_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182099	PRK09831, PRK09831, GNAT family N-acetyltransferase.	4.77997e-103
NZ_CP007442.1\|WP_000973090.1\|246032_248477_-\|acyl-CoA-dehydrogenase-FadE	gnl\|CDD\|236528	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed.	0
NZ_CP007442.1\|WP_000174677.1\|261563_261965_+\|sigma-factor-binding-protein-Crl	gnl\|CDD\|182882	PRK10984, PRK10984, sigma factor-binding protein Crl.	1.11584e-87
NZ_CP007442.1\|WP_001293003.1\|257993_259451_-\|cytosol-nonspecific-dipeptidase	gnl\|CDD\|184986	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional.	0
NZ_CP007442.1\|WP_001225679.1\|250238_250979_-\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.07529e-116

>NZ_CP007442.1|WP_000006256.1|252204_252702_+|REP-associated-tyrosine-transposase-RayT
MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKRDRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDINAGERIIL
>NZ_CP007442.1|WP_000009291.1|251270_252029_+|C40-family-peptidase
MSFMSSFLLGRFLHPGVFSLCVLLPLFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEAKLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGENIRVSRLAEPFWQDHFLGARRILTEETIL
>NZ_CP007442.1|WP_001225679.1|250238_250979_-|murein-L,D-transpeptidase
MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNYTLPEAK
>NZ_CP007442.1|WP_000333380.1|249500_250268_+|class-II-glutamine-amidotransferase
MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV
>NZ_CP007442.1|WP_000284050.1|248716_249295_+|D-sedoheptulose-7-phosphate-isomerase
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
>NZ_CP007442.1|WP_000973090.1|246032_248477_-|acyl-CoA-dehydrogenase-FadE
MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKNHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPFDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALAKGLIDKDEAAILVKAEESRLCSINVDDFDPEELATKPVKLPEKVRKVEAA
>NZ_CP007442.1|WP_000532698.1|245516_245990_+|C-lysozyme-inhibitor
MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK
>NZ_CP007442.1|WP_001118055.1|244592_245363_-|2-oxoglutaramate-amidase
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQNDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAIYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMVALREYREKFPAWQDADEFRLR
>NZ_CP007442.1|WP_000978828.1|242704_243154_+|hypothetical-protein
MMKYLMVLLSLFSGSVLGMGRVNELCGIDSVKTIEIINLPSYVTTLVPLSKEGLNEIYRYKVVVNEISDLYAGKIIDLLQMKYFRKEKYNNIRWGVSIISKGNNKCEIYFDAFGECGSVNGINVCFEKNEMIGWIKKEIPLLSQKIGGL
>NZ_CP007442.1|WP_001284199.1|239176_239659_-|Hcp-family-type-VI-secretion-system-effector
MANISYLSLSGETQGLISAGCSTLDSVGNKAQPEHKDQIMVYALMHSISRSQNVNHHELIITKPVDKSSPLLAKALSDNEKMAICEFILYRTSKAGIYQPYYKINLSKARISSIDFVTPHAVLEKELEPQERIAFIYEDISWEHTLAGTNAMSKWQDRVQ
>NZ_CP007442.1|WP_000952760.1|253019_254759_-|flagellar-type-III-secretion-system-protein-FlhA
MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRISDNGDITHDVRHQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFSYDDITQLHNRLSSMAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALM
>NZ_CP007442.1|WP_000207589.1|254703_255489_+|putative-lateral-flagellar-export/assembly-protein-LafU
MTTIKLIVNSVSKSERESIIAALHGQSIFSGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRMR
>NZ_CP007442.1|WP_001226155.1|255559_256615_+|DNA-polymerase-IV
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELHLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVILLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
>NZ_CP007442.1|WP_001059874.1|256611_257064_+|GNAT-family-N-acetyltransferase
MNNIQIRNYQPGDFQQLCAIFIRAVMMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFISRIERHIDMLFVDPEYTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQIVKQQHVECRGAWFTNFYMRYKPQH
>NZ_CP007442.1|WP_001295202.1|257370_257637_+|hypothetical-protein
MEWYMGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPARRRGNGAGNRNGPLL
>NZ_CP007442.1|WP_001293003.1|257993_259451_-|cytosol-nonspecific-dipeptidase
MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWLQADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQDILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIKSVGHYWTLLTELLKEIPAK
>NZ_CP007442.1|WP_001291992.1|259711_260170_+|xanthine-phosphoribosyltransferase
MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDNYVVDIPQDTWIEQPWDMGVVFVPPISGR
>NZ_CP007442.1|WP_000189539.1|260261_261506_+|esterase-FrsA
MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDDALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFDKGLQEITGWIEKRLC
>NZ_CP007442.1|WP_000174677.1|261563_261965_+|sigma-factor-binding-protein-Crl
MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNVKPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLREFHEKLRELLTTLNLKLEPADDFRDEPVKLTA
>NZ_CP007442.1|WP_000749881.1|262003_263059_-|phosphoporin-PhoE
MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYMSDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007442_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007442_3

2950054-2950632

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACACA	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT

9 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP007442_3

>merge|NZ_CP007442|3|2950054-2950632|PILER-CR,CRISPRCasFinder,CRT
CGGTTTATCCCCGCTGGCGCGGGGAACACTGTACGCGGCGAGTTTTAGCGACAGGTCATCCCGGTTTATCCCCGCTGGCGCGGGGAACACGGATCTGCCAGCGCCTCTGCGGGGCGGTAAACCGGTTTATCCCCGCTGGCGCGGGGAACACTACGCCAGCCACCTGCTTCGCCAGCCGTTCGGCGGTTTATCCCCGCTGGCGCGGGGAACACGGTTTGCTCCCATGTTTTGCCGGTAATCCGCATGGTTTATCCCCGCTGGCGCGGGGAACACAAAGCACGGAATTTTTACAGCGCGTTAGATCCCGGTTTATCCCCGCTGGCGCGGGGAACACTCACGGTAGCGCCACTGCGCGTCGGTGACGGGCGGTTTATCCCCGCTGGCGCGGGGAACACAACGAACAGGGATTTGTCGGCAGTTTCTTTACCGGTTTATCCCCGCTGGCGCGGGGAACACATAATTCGCAAATCAATATATATTTTGTCCGTCGGTTTATCCCCGCTGGCGCGGGGAACACAATTGCGGATGCTCCCGGAATTGCGCGGGCAACGGTTTATCCCCGCTGGCGCGGGGAACACA

>NZ_CP007442|3|1|2950054-2950631|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTACGCGGCGAGTTTTAGCGACAGGTCATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATCTGCCAGCGCCTCTGCGGGGCGGTAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACGCCAGCCACCTGCTTCGCCAGCCGTTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTTTGCTCCCATGTTTTGCCGGTAATCCGCA
TGGTTTATCCCCGCTGGCGCGGGGAACAC	AAAGCACGGAATTTTTACAGCGCGTTAGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACGGTAGCGCCACTGCGCGTCGGTGACGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACGAACAGGGATTTGTCGGCAGTTTCTTTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAATTCGCAAATCAATATATATTTTGTCCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTGCGGATGCTCCCGGAATTGCGCGGGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007442|3|3|2950054-2950632|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACACT	GTACGCGGCGAGTTTTAGCGACAGGTCATCC
CGGTTTATCCCCGCTGGCGCGGGGAACACG	GATCTGCCAGCGCCTCTGCGGGGCGGTAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACACT	ACGCCAGCCACCTGCTTCGCCAGCCGTTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACACG	GTTTGCTCCCATGTTTTGCCGGTAATCCGCA
TGGTTTATCCCCGCTGGCGCGGGGAACACA	AAGCACGGAATTTTTACAGCGCGTTAGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACACT	CACGGTAGCGCCACTGCGCGTCGGTGACGGG
CGGTTTATCCCCGCTGGCGCGGGGAACACA	ACGAACAGGGATTTGTCGGCAGTTTCTTTAC
CGGTTTATCCCCGCTGGCGCGGGGAACACA	TAATTCGCAAATCAATATATATTTTGTCCGT
CGGTTTATCCCCGCTGGCGCGGGGAACACA	ATTGCGGATGCTCCCGGAATTGCGCGGGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACACA

>NZ_CP007442|3|1|2950054-2950631|CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTACGCGGCGAGTTTTAGCGACAGGTCATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATCTGCCAGCGCCTCTGCGGGGCGGTAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACGCCAGCCACCTGCTTCGCCAGCCGTTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTTTGCTCCCATGTTTTGCCGGTAATCCGCA
TGGTTTATCCCCGCTGGCGCGGGGAACAC	AAAGCACGGAATTTTTACAGCGCGTTAGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACGGTAGCGCCACTGCGCGTCGGTGACGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACGAACAGGGATTTGTCGGCAGTTTCTTTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAATTCGCAAATCAATATATATTTTGTCCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTGCGGATGCTCCCGGAATTGCGCGGGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007442.1\|WP_001246104.1\|2945367_2945691_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP007442.1\|WP_001295182.1\|2941866_2942628_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP007442.1\|WP_000085051.1\|2952569_2953316_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP007442.1\|WP_001173673.1\|2945740_2946346_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP007442.1\|WP_000063176.1\|2950727_2951021_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP007442.1\|WP_000490426.1\|2948934_2949972_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP007442.1\|WP_001233970.1\|2956586_2959286_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP007442.1\|WP_000568943.1\|2942608_2943658_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP007442.1\|WP_000372108.1\|2947774_2948683_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP007442.1\|WP_048943256.1\|2946345_2947773_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP007442.1\|WP_000281446.1\|2951937_2952588_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP007442.1\|WP_001219242.1\|2943654_2944134_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP007442.1\|WP_000029329.1\|2954393_2954930_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP007442.1\|WP_048943257.1\|2951017_2951941_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP007442.1\|WP_000246138.1\|2944133_2944844_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP007442.1\|WP_000956458.1\|2959479_2959632_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP007442.1\|WP_001084084.1\|2954926_2956489_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP007442.1\|WP_000517476.1\|2944862_2945174_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP007442.1\|WP_000039842.1\|2959896_2960631_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP007442.1\|WP_000206443.1\|2953326_2954382_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843

Protein	Function_ID	Function_description	E-value
NZ_CP007442.1\|WP_001246104.1\|2945367_2945691_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP007442.1\|WP_001295182.1\|2941866_2942628_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP007442.1\|WP_000085051.1\|2952569_2953316_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.83917e-49
NZ_CP007442.1\|WP_001173673.1\|2945740_2946346_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP007442.1\|WP_000063176.1\|2950727_2951021_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
NZ_CP007442.1\|WP_000490426.1\|2948934_2949972_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP007442.1\|WP_001233970.1\|2956586_2959286_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.23832e-176
NZ_CP007442.1\|WP_000568943.1\|2942608_2943658_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP007442.1\|WP_000372108.1\|2947774_2948683_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP007442.1\|WP_048943256.1\|2946345_2947773_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP007442.1\|WP_000281446.1\|2951937_2952588_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.0289e-91
NZ_CP007442.1\|WP_001219242.1\|2943654_2944134_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP007442.1\|WP_000029329.1\|2954393_2954930_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.12087e-29
NZ_CP007442.1\|WP_048943257.1\|2951017_2951941_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.1696e-157
NZ_CP007442.1\|WP_000246138.1\|2944133_2944844_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP007442.1\|WP_000956458.1\|2959479_2959632_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP007442.1\|WP_001084084.1\|2954926_2956489_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP007442.1\|WP_000517476.1\|2944862_2945174_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP007442.1\|WP_000039842.1\|2959896_2960631_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.33579e-136
NZ_CP007442.1\|WP_000206443.1\|2953326_2954382_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.21697e-155

>NZ_CP007442.1|WP_000490426.1|2948934_2949972_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP007442.1|WP_000372108.1|2947774_2948683_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP007442.1|WP_048943256.1|2946345_2947773_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLNLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP007442.1|WP_001173673.1|2945740_2946346_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP007442.1|WP_001246104.1|2945367_2945691_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP007442.1|WP_000517476.1|2944862_2945174_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP007442.1|WP_000246138.1|2944133_2944844_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP007442.1|WP_001219242.1|2943654_2944134_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP007442.1|WP_000568943.1|2942608_2943658_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP007442.1|WP_001295182.1|2941866_2942628_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP007442.1|WP_000063176.1|2950727_2951021_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP007442.1|WP_048943257.1|2951017_2951941_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVNLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP007442.1|WP_000281446.1|2951937_2952588_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELRTGQQLCFNLRANPTICKSGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP007442.1|WP_000085051.1|2952569_2953316_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTIQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP007442.1|WP_000206443.1|2953326_2954382_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWAMAEKGTEQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP007442.1|WP_000029329.1|2954393_2954930_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP007442.1|WP_001084084.1|2954926_2956489_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDHRRWDDIWEDGLEVEKLREALLSLEHAFQFGPDSPSFMQDFEALTGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKMWLNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRFVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVNLERIMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP007442.1|WP_001233970.1|2956586_2959286_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKEGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLAIKALFPRIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAQAMDIKHYWQKALVQAQNALTVFPPKAETAPFTGINTLFPFIENPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGAEGQQEAPLLGKDDYPWLTHVTKTDVHSHRVATRKEVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKEDGSQRAGKVLICTQVLEQSVDCDLDEMISDLAPIDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHSARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRARAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCIEQRQDPEMANVILVTDDESCGYSAMEGLTGKVG
>NZ_CP007442.1|WP_000956458.1|2959479_2959632_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP007442.1|WP_000039842.1|2959896_2960631_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMLEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP007442_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007442_4

2976329-2976845

Unclear

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	PILER-CR

8 spacers

The CRISPR arrays of NZ_CP007442_4

>merge|NZ_CP007442|4|2976329-2976845|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGCGCGGGGAACTCATATACAGCAAACCTTCAGAATGCATTCCGGGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCCGTCTGCCTCCAGCCCAGCCCTGGATATTTCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGTTCACTCACGCAACGTCTGAGCGCGTTGACGGTTTATCCCCGCTGGCGCGGGGAACTCAGGGCCGCCGCTACCCCAGAAGTGCCACTCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGTATCGTCTCGTTATTGCGCCGCCCCAACTCGGTTTATCCCCGCTGGCGCGGGGAACTCAGTATGCGTTCAATCACTGTCAGGCCTACTTCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGTTGCCCGATGGACACTCCCAGACCATCAGCCGGTTTATCCCCGCTGGCGCGGGGAACTCACTAAACTTAATGATGGCCGTTACAGCGTGGACGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP007442|4|4|2976329-2976845|CRISPRCasFinder
TGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATACAGCAAACCTTCAGAATGCATTCCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGTTCACTCACGCAACGTCTGAGCGCGTTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGGGCCGCCGCTACCCCAGAAGTGCCACTCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGTATCGTCTCGTTATTGCGCCGCCCCAACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGTATGCGTTCAATCACTGTCAGGCCTACTTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGTTGCCCGATGGACACTCCCAGACCATCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTAAACTTAATGATGGCCGTTACAGCGTGGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP007442|4|2|2976329-2976845|CRT
TGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATACAGCAAACCTTCAGAATGCATTCCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGTTCACTCACGCAACGTCTGAGCGCGTTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGGGCCGCCGCTACCCCAGAAGTGCCACTCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGTATCGTCTCGTTATTGCGCCGCCCCAACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGTATGCGTTCAATCACTGTCAGGCCTACTTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGTTGCCCGATGGACACTCCCAGACCATCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTAAACTTAATGATGGCCGTTACAGCGTGGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP007442|4|2|2976330-2976845|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAACTCA	TATACAGCAAACCTTCAGAATGCATTCCGGGC
GGTTTATCCCCGCTGGCGCGGGGAACTCG	CCGTCTGCCTCCAGCCCAGCCCTGGATATTTC
GGTTTATCCCCGCTGGCGCGGGGAACTCT	GGTTCACTCACGCAACGTCTGAGCGCGTTGAC
GGTTTATCCCCGCTGGCGCGGGGAACTCA	GGGCCGCCGCTACCCCAGAAGTGCCACTCCCC
GGTTTATCCCCGCTGGCGCGGGGAACTCG	CGTATCGTCTCGTTATTGCGCCGCCCCAACTC
GGTTTATCCCCGCTGGCGCGGGGAACTCA	GTATGCGTTCAATCACTGTCAGGCCTACTTCC
GGTTTATCCCCGCTGGCGCGGGGAACTCA	GTTGCCCGATGGACACTCCCAGACCATCAGCC
GGTTTATCCCCGCTGGCGCGGGGAACTCA	CTAAACTTAATGATGGCCGTTACAGCGTGGAC
GGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007442.1\|WP_001268446.1\|2978148_2979021_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP007442.1\|WP_000021330.1\|2971805_2972591_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP007442.1\|WP_000254738.1\|2983193_2983529_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP007442.1\|WP_000581937.1\|2983528_2983777_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP007442.1\|WP_000210878.1\|2980466_2982104_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP007442.1\|WP_000147666.1\|2968850_2970260_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP007442.1\|WP_000059312.1\|2970281_2971736_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP007442.1\|WP_001199979.1\|2977184_2977856_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP007442.1\|WP_001071648.1\|2982331_2983123_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP007442.1\|WP_001295150.1\|2964974_2966246_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP007442.1\|WP_000987944.1\|2964531_2964897_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP007442.1\|WP_001130266.1\|2966513_2967089_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP007442.1\|WP_001324446.1\|2967236_2968097_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP007442.1\|WP_000226815.1\|2983854_2986089_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP007442.1\|WP_000039683.1\|2974212_2975691_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP007442.1\|WP_000036723.1\|2979080_2980379_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP007442.1\|WP_000046838.1\|2986136_2987438_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP007442.1\|WP_000109532.1\|2966236_2966497_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP007442.1\|WP_001288229.1\|2977994_2978135_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007442.1\|WP_001324445.1\|2968093_2968873_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997

Protein	Function_ID	Function_description	E-value
NZ_CP007442.1\|WP_001268446.1\|2978148_2979021_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	5.56011e-100
NZ_CP007442.1\|WP_000021330.1\|2971805_2972591_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.14687e-138
NZ_CP007442.1\|WP_000254738.1\|2983193_2983529_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP007442.1\|WP_000581937.1\|2983528_2983777_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP007442.1\|WP_000210878.1\|2980466_2982104_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP007442.1\|WP_000147666.1\|2968850_2970260_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.50431e-51
NZ_CP007442.1\|WP_000059312.1\|2970281_2971736_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.25325e-82
NZ_CP007442.1\|WP_001199979.1\|2977184_2977856_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.23739e-155
NZ_CP007442.1\|WP_001071648.1\|2982331_2983123_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP007442.1\|WP_001295150.1\|2964974_2966246_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	2.82789e-125
NZ_CP007442.1\|WP_000987944.1\|2964531_2964897_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	9.8593e-60
NZ_CP007442.1\|WP_001130266.1\|2966513_2967089_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP007442.1\|WP_001324446.1\|2967236_2968097_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.47186e-88
NZ_CP007442.1\|WP_000226815.1\|2983854_2986089_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP007442.1\|WP_000039683.1\|2974212_2975691_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	9.76816e-108
NZ_CP007442.1\|WP_000036723.1\|2979080_2980379_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP007442.1\|WP_000046838.1\|2986136_2987438_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP007442.1\|WP_000109532.1\|2966236_2966497_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	3.6328e-41
NZ_CP007442.1\|WP_001324445.1\|2968093_2968873_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	7.46503e-62

>NZ_CP007442.1|WP_000039683.1|2974212_2975691_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNYFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_CP007442.1|WP_000021330.1|2971805_2972591_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAASCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP007442.1|WP_000059312.1|2970281_2971736_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP007442.1|WP_000147666.1|2968850_2970260_-|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP007442.1|WP_001324445.1|2968093_2968873_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWRDYLRQRMQP
>NZ_CP007442.1|WP_001324446.1|2967236_2968097_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLIIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP007442.1|WP_001130266.1|2966513_2967089_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP007442.1|WP_000109532.1|2966236_2966497_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLISACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP007442.1|WP_001295150.1|2964974_2966246_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERCITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>NZ_CP007442.1|WP_000987944.1|2964531_2964897_+|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE
>NZ_CP007442.1|WP_001199979.1|2977184_2977856_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVISRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP007442.1|WP_001288229.1|2977994_2978135_+|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNNNESKITDAAVNLFIQI
>NZ_CP007442.1|WP_001268446.1|2978148_2979021_+|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIKVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_CP007442.1|WP_000036723.1|2979080_2980379_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP007442.1|WP_000210878.1|2980466_2982104_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP007442.1|WP_001071648.1|2982331_2983123_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP007442.1|WP_000254738.1|2983193_2983529_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP007442.1|WP_000581937.1|2983528_2983777_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP007442.1|WP_000226815.1|2983854_2986089_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP007442.1|WP_000046838.1|2986136_2987438_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVSRHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK

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Crispr_ID: NZ_CP007442_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007442_5

3486858-3486997

Orphan

Consensus_repeat	Method
TGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGACACAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007442_5

>merge|NZ_CP007442|5|3486858-3486997|CRISPRCasFinder
TGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGACACAAAACGTAGGTCAGATAAGGTGTTTACGCCGCATCCGACTGCTGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAA

>NZ_CP007442|5|5|3486858-3486997|CRISPRCasFinder
TGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGACACAAA	ACGTAGGTCAGATAAGGTGTTTACGCCGCATCCGACTGCTGT
TGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007442.1\|WP_000809262.1\|3482334_3483195_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|184956
NZ_CP007442.1\|WP_000249160.1\|3483259_3485296_+\|penicillin-binding-protein-activator-LpoA	unknown	unknown	gnl\|CDD\|225649
NZ_CP007442.1\|WP_000189314.1\|3489916_3490219_+\|DNA-damage-response-exodeoxyribonuclease-YhbQ	unknown	unknown	gnl\|CDD\|178979
NZ_CP007442.1\|WP_001295552.1\|3490702_3491227_-\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP007442.1\|WP_000908554.1\|3490205_3490709_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP007442.1\|WP_000421305.1\|3491435_3492431_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP007442.1\|WP_000816988.1\|3481200_3482292_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|366088
NZ_CP007442.1\|WP_000044770.1\|3477948_3478644_+\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_CP007442.1\|WP_001045434.1\|3477284_3477869_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP007442.1\|WP_000147576.1\|3487048_3488089_-\|permease	unknown	unknown	gnl\|CDD\|223773
NZ_CP007442.1\|WP_000130392.1\|3493523_3494531_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP007442.1\|WP_001301318.1\|3492439_3493318_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP007442.1\|WP_001158034.1\|3485668_3486259_+\|DnaA-initiator-associating-protein-DiaA	unknown	unknown	gnl\|CDD\|182811
NZ_CP007442.1\|WP_001295551.1\|3488161_3488797_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187560
NZ_CP007442.1\|WP_000449030.1\|3489422_3489866_-\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP007442.1\|WP_000246837.1\|3485253_3485649_+\|YraN-family-protein	unknown	unknown	gnl\|CDD\|129354
NZ_CP007442.1\|WP_001136488.1\|3478673_3481190_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_CP007442.1\|WP_001323952.1\|3476128_3476884_+\|galactosamine-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|182064
NZ_CP007442.1\|WP_000037608.1\|3488924_3489443_+\|protein/nucleic-acid-deglycase	unknown	unknown	gnl\|CDD\|153228
NZ_CP007442.1\|WP_000646033.1\|3486268_3486844_+\|divisome-associated-lipoprotein-YraP	unknown	unknown	gnl\|CDD\|182907

Protein	Function_ID	Function_description	E-value
NZ_CP007442.1\|WP_000809262.1\|3482334_3483195_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|184956	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional.	0
NZ_CP007442.1\|WP_000249160.1\|3483259_3485296_+\|penicillin-binding-protein-activator-LpoA	gnl\|CDD\|225649	COG3107, LppC, Putative lipoprotein [General function prediction only].	6.33924e-141
NZ_CP007442.1\|WP_000189314.1\|3489916_3490219_+\|DNA-damage-response-exodeoxyribonuclease-YhbQ	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	3.58629e-45
NZ_CP007442.1\|WP_001295552.1\|3490702_3491227_-\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	6.78212e-85
NZ_CP007442.1\|WP_000908554.1\|3490205_3490709_-\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	1.31299e-64
NZ_CP007442.1\|WP_000421305.1\|3491435_3492431_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	4.87234e-118
NZ_CP007442.1\|WP_000816988.1\|3481200_3482292_+\|fimbrial-protein	gnl\|CDD\|366088	pfam00419, Fimbrial, Fimbrial protein.	3.34626e-21
NZ_CP007442.1\|WP_000044770.1\|3477948_3478644_+\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	9.16141e-79
NZ_CP007442.1\|WP_001045434.1\|3477284_3477869_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	1.76746e-31
NZ_CP007442.1\|WP_000147576.1\|3487048_3488089_-\|permease	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	4.38189e-63
NZ_CP007442.1\|WP_000130392.1\|3493523_3494531_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP007442.1\|WP_001301318.1\|3492439_3493318_+\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP007442.1\|WP_001158034.1\|3485668_3486259_+\|DnaA-initiator-associating-protein-DiaA	gnl\|CDD\|182811	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional.	5.61903e-143
NZ_CP007442.1\|WP_001295551.1\|3488161_3488797_-\|NAD(P)H-binding-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.89133e-65
NZ_CP007442.1\|WP_000449030.1\|3489422_3489866_-\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	2.19601e-100
NZ_CP007442.1\|WP_000246837.1\|3485253_3485649_+\|YraN-family-protein	gnl\|CDD\|129354	TIGR00252, UPF0102_protein_HI_1656, TIGR00252 family protein. the scores for Mycobacterium tuberculosis and Treponema pallidum are low considering the alignment [Hypothetical proteins, Conserved].	3.92681e-63
NZ_CP007442.1\|WP_001136488.1\|3478673_3481190_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP007442.1\|WP_001323952.1\|3476128_3476884_+\|galactosamine-6-phosphate-isomerase	gnl\|CDD\|182064	PRK09762, PRK09762, galactosamine-6-phosphate isomerase; Provisional.	1.51027e-147
NZ_CP007442.1\|WP_000037608.1\|3488924_3489443_+\|protein/nucleic-acid-deglycase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	6.06977e-86
NZ_CP007442.1\|WP_000646033.1\|3486268_3486844_+\|divisome-associated-lipoprotein-YraP	gnl\|CDD\|182907	PRK11023, PRK11023, divisome-associated lipoprotein YraP.	1.97056e-117

>NZ_CP007442.1|WP_000646033.1|3486268_3486844_+|divisome-associated-lipoprotein-YraP
MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFTFIK
>NZ_CP007442.1|WP_001158034.1|3485668_3486259_+|DnaA-initiator-associating-protein-DiaA
MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD
>NZ_CP007442.1|WP_000246837.1|3485253_3485649_+|YraN-family-protein
MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS
>NZ_CP007442.1|WP_000249160.1|3483259_3485296_+|penicillin-binding-protein-activator-LpoA
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS
>NZ_CP007442.1|WP_000809262.1|3482334_3483195_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG
>NZ_CP007442.1|WP_000816988.1|3481200_3482292_+|fimbrial-protein
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQAGYYKLNDSLDIKTTLKANDIPGLVTDQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR
>NZ_CP007442.1|WP_001136488.1|3478673_3481190_+|fimbrial-biogenesis-outer-membrane-usher-protein
MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYSGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNEKNRNISVGVSGQQWGIGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSVNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDETGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH
>NZ_CP007442.1|WP_000044770.1|3477948_3478644_+|molecular-chaperone
MSKRTFAVIITLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGTSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDNVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ
>NZ_CP007442.1|WP_001045434.1|3477284_3477869_+|type-1-fimbrial-protein
MNKVTKTAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFRSVGDRSPKIPFTIPLVNCPVTGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAGTAATGVGIRIDDAESGNLMPLNAMGNDNTVYQIPADSAGIVNVDLIAYYVSTVEASEITPGEADAVVNVTLDYR
>NZ_CP007442.1|WP_001323952.1|3476128_3476884_+|galactosamine-6-phosphate-isomerase
MERGTASGGASLLKEFHPVQTLQQVENYTALSERASEYLLAVIRSKPDAVICLATGATPLLTYHYLVEKIHQQQVDVSQLTFVKLDEWVDLPLTMPGTCETFLQQHIVQPLGLREDQLISFRSEEINETECERVTNLIARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHEMLKTAGRPVTRGITLGLKDILNAREVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHSNFICLINT
>NZ_CP007442.1|WP_000147576.1|3487048_3488089_-|permease
MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGTVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF
>NZ_CP007442.1|WP_001295551.1|3488161_3488797_-|NAD(P)H-binding-protein
MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQLTDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDARDVARVMLAESMRPEHEGVTILSSSELRKRAE
>NZ_CP007442.1|WP_000037608.1|3488924_3489443_+|protein/nucleic-acid-deglycase
MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA
>NZ_CP007442.1|WP_000449030.1|3489422_3489866_-|YhbP-family-protein
METLIAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFYILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYNRRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA
>NZ_CP007442.1|WP_000189314.1|3489916_3490219_+|DNA-damage-response-exodeoxyribonuclease-YhbQ
MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD
>NZ_CP007442.1|WP_000908554.1|3490205_3490709_-|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF
>NZ_CP007442.1|WP_001295552.1|3490702_3491227_-|SCP2-domain-containing-protein
MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC
>NZ_CP007442.1|WP_000421305.1|3491435_3492431_+|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ
>NZ_CP007442.1|WP_001301318.1|3492439_3493318_+|U32-family-peptidase
MKYSLGPVLWYWPKETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA
>NZ_CP007442.1|WP_000130392.1|3493523_3494531_+|LLM-class-flavin-dependent-oxidoreductase
MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPNVRPVPGYGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG

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Crispr_ID: NZ_CP007442_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007442_6

4710744-4710890

Orphan

Consensus_repeat	Method
TCTGTGTCGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007442_6

>merge|NZ_CP007442|6|4710744-4710890|CRISPRCasFinder
TCTGTGTCGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACATTGCCAGATGCGACGCTGTCGCGTCTTATCAGGCCTACGGGTCCGGTGCTCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACA

>NZ_CP007442|6|6|4710744-4710890|CRISPRCasFinder
TCTGTGTCGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACA	TTGCCAGATGCGACGCTGTCGCGTCTTATCAGGCCTACGGGTCCGGTGC
TCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007442.1\|WP_000786397.1\|4710199_4710643_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP007442.1\|WP_000584114.1\|4712681_4713782_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_CP007442.1\|WP_015364387.1\|4721656_4722676_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_CP007442.1\|WP_000002960.1\|4704935_4705352_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NZ_CP007442.1\|WP_000896738.1\|4721089_4721653_+\|gluconokinase	unknown	unknown	gnl\|CDD\|182097
NZ_CP007442.1\|WP_001197418.1\|4719841_4720873_-\|L-idonate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|182130
NZ_CP007442.1\|WP_000079650.1\|4706094_4707291_+\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP007442.1\|WP_001294563.1\|4715024_4716527_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP007442.1\|WP_001059395.1\|4705398_4705902_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP007442.1\|WP_001702108.1\|4702782_4703712_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007442.1\|WP_000256659.1\|4700800_4701394_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP007442.1\|WP_001295681.1\|4713781_4714864_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP007442.1\|WP_000036530.1\|4702113_4702692_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007442.1\|WP_001348245.1\|4716604_4717603_-\|DNA-binding-transcriptional-regulator-IdnR	unknown	unknown	gnl\|CDD\|380489
NZ_CP007442.1\|WP_001348242.1\|4701538_4701991_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
NZ_CP007442.1\|WP_000012907.1\|4703769_4704774_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP007442.1\|WP_000397144.1\|4710903_4712415_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP007442.1\|WP_001128332.1\|4717669_4718989_-\|gnt-II-system-L-idonate-transporter	unknown	unknown	gnl\|CDD\|129873
NZ_CP007442.1\|WP_000416420.1\|4707344_4710200_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP007442.1\|WP_000998700.1\|4719053_4719818_-\|gluconate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|181225

Protein	Function_ID	Function_description	E-value
NZ_CP007442.1\|WP_000786397.1\|4710199_4710643_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	1.17566e-66
NZ_CP007442.1\|WP_000584114.1\|4712681_4713782_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP007442.1\|WP_015364387.1\|4721656_4722676_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	9.61104e-169
NZ_CP007442.1\|WP_000002960.1\|4704935_4705352_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	6.53598e-69
NZ_CP007442.1\|WP_000896738.1\|4721089_4721653_+\|gluconokinase	gnl\|CDD\|182097	PRK09825, idnK, gluconokinase.	1.3617e-126
NZ_CP007442.1\|WP_001197418.1\|4719841_4720873_-\|L-idonate-5-dehydrogenase	gnl\|CDD\|182130	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional.	0
NZ_CP007442.1\|WP_000079650.1\|4706094_4707291_+\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	1.61495e-149
NZ_CP007442.1\|WP_001294563.1\|4715024_4716527_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP007442.1\|WP_001059395.1\|4705398_4705902_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.42611e-18
NZ_CP007442.1\|WP_000416420.1\|4707344_4710200_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP007442.1\|WP_000256659.1\|4700800_4701394_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.74823e-10
NZ_CP007442.1\|WP_001295681.1\|4713781_4714864_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP007442.1\|WP_001348245.1\|4716604_4717603_-\|DNA-binding-transcriptional-regulator-IdnR	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	3.51734e-109
NZ_CP007442.1\|WP_001348242.1\|4701538_4701991_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	1.72624e-69
NZ_CP007442.1\|WP_000012907.1\|4703769_4704774_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP007442.1\|WP_000397144.1\|4710903_4712415_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP007442.1\|WP_001128332.1\|4717669_4718989_-\|gnt-II-system-L-idonate-transporter	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP007442.1\|WP_000998700.1\|4719053_4719818_-\|gluconate-5-dehydrogenase	gnl\|CDD\|181225	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional.	0

>NZ_CP007442.1|WP_000786397.1|4710199_4710643_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSNPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_CP007442.1|WP_000416420.1|4707344_4710200_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVKNGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDDAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP007442.1|WP_000079650.1|4706094_4707291_+|DUF898-domain-containing-protein
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLRHQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAVGMGTVFFISTKMLHANSSSSVIISMVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGVMPSLPFL
>NZ_CP007442.1|WP_001059395.1|4705398_4705902_-|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYDGEVVGGGGIAPLTGSEADICELQKMYFLPAIRGKGLAKKLALMAMDHAHEMGFKRCYLETTAFLTEAIALYEHLGFQHIDYALGCTGHVDCEVRMLRDL
>NZ_CP007442.1|WP_000002960.1|4704935_4705352_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDVVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEEYIDDDDDGVRH
>NZ_CP007442.1|WP_000012907.1|4703769_4704774_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
>NZ_CP007442.1|WP_001702108.1|4702782_4703712_+|hypothetical-protein
MPHVCNEIIPDLLGEEGILEEIDNLSASDDAFTNNKKSNDEINKIKIDLAHILIDSLDDAPVDLSPVIRSMLETFLKSPYMSDVKILEWCFNKSIEYFNAAAKIDYACDVIKNIKSGCDQSKRAEALFSLLDKEPYKNSCKLQGLIWDKLVAYVNDFNLSNQEKSRLILKLFDDVKLLFNEVPVSILVNDIFLKGFFMKQPDFAKWYFYQLLKCYEGEQLYLNELGYVYGDEEKTKEIVNKLPGYVVKIFEEKMVNELKIRTRMMEVLRDGKINIYNYINEKQLEKLNPPENLRAVIEKWGWKNRTHTA
>NZ_CP007442.1|WP_000036530.1|4702113_4702692_+|hypothetical-protein
MSKISHSDYFHYVASCRNFKPKHDVLNSWCVGINNFSRIAEGQHNKRNILSPKAFLEFLAWIFTLGHVDFSESRNEAGRKMMGNIKSSSYLKKDDGSEIMRFYMNNPEGWEDDIRPVILEVRLTPPSVNGARQGRTAIIFDDVTESGKSIFRFEGTDFETKDESSLLLITNKVLACYQREINNEIALQLNNN
>NZ_CP007442.1|WP_001348242.1|4701538_4701991_+|YhcH/YjgK/YiaL-family-protein
MIIGNIHNLQSWLPQELRQAIEHIKANVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>NZ_CP007442.1|WP_000256659.1|4700800_4701394_+|TetR/AcrR-family-transcriptional-regulator
MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLVDILRDDRPVGECLAEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETAIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSLEQLCATAALAGGAIKTILKE
>NZ_CP007442.1|WP_000397144.1|4710903_4712415_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP007442.1|WP_000584114.1|4712681_4713782_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_CP007442.1|WP_001295681.1|4713781_4714864_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP007442.1|WP_001294563.1|4715024_4716527_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAEEGTSSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRSDTNGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASTEQQNNPAVKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGVLGSLLGGRRR
>NZ_CP007442.1|WP_001348245.1|4716604_4717603_-|DNA-binding-transcriptional-regulator-IdnR
MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLDKRVRRKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSATPDLDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRMAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL
>NZ_CP007442.1|WP_001128332.1|4717669_4718989_-|gnt-II-system-L-idonate-transporter
MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVLLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLLPHPGPTAIATIFEANLGTTLLYGFIITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVDSGVGQYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVMETLISIMGLLGVLAINAVLH
>NZ_CP007442.1|WP_000998700.1|4719053_4719818_-|gluconate-5-dehydrogenase
MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLRQEGIRAVAAPFNVTHKHEIDTAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV
>NZ_CP007442.1|WP_001197418.1|4719841_4720873_-|L-idonate-5-dehydrogenase
MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKVIHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTEMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGASEIVCADVSPRSLLLAKEMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLKGSFRFTSEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF
>NZ_CP007442.1|WP_000896738.1|4721089_4721653_+|gluconokinase
MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQADEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE
>NZ_CP007442.1|WP_015364387.1|4721656_4722676_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGKLEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPHELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007442_2	2.1\|252785\|48\|NZ_CP007442\|CRISPRCasFinder	252785-252832	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4089-4136	3	0.938
NZ_CP007442_2	2.1\|252785\|48\|NZ_CP007442\|CRISPRCasFinder	252785-252832	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4088-4135	3	0.938
NZ_CP007442_2	2.1\|252785\|48\|NZ_CP007442\|CRISPRCasFinder	252785-252832	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4088-4135	3	0.938
NZ_CP007442_2	2.1\|252785\|48\|NZ_CP007442\|CRISPRCasFinder	252785-252832	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4088-4135	3	0.938
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31255-31303	6	0.878
NZ_CP007442_3	3.12\|2950206\|31\|NZ_CP007442\|CRISPRCasFinder	2950206-2950236	31	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	530641-530671	7	0.774
NZ_CP007442_3	3.15\|2950389\|31\|NZ_CP007442\|CRISPRCasFinder	2950389-2950419	31	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	17977-18007	7	0.774
NZ_CP007442_3	3.18\|2950572\|31\|NZ_CP007442\|CRISPRCasFinder	2950572-2950602	31	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	62682-62712	7	0.774
NZ_CP007442_3	3.18\|2950572\|31\|NZ_CP007442\|CRISPRCasFinder	2950572-2950602	31	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1222106-1222136	7	0.774
NZ_CP007442_3	3.18\|2950572\|31\|NZ_CP007442\|CRISPRCasFinder	2950572-2950602	31	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2467672-2467702	7	0.774
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_MG299151	Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_KY471628	Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence	45716-45747	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_MG299131	Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_KY471629	Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence	45716-45747	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_MG299133	Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_MG299128	Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_MG299147	Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NC_018995	Escherichia coli plasmid pHUSEC41-1, complete sequence	29015-29046	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_CP053235	Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence	78292-78323	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_CP005999	Escherichia coli B7A plasmid pEB1, complete sequence	39563-39594	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	KU932021	Escherichia coli plasmid pEC3I, complete sequence	51902-51933	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_CP024154	Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence	18560-18591	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NC_011754	Escherichia coli ED1a plasmid pECOED, complete sequence	49240-49271	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_CP015141	Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence	81434-81465	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_LR213460	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3	28916-28947	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_MH287044	Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence	36182-36213	7	0.781
NZ_CP007442_4	4.2\|2976419\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976419-2976450	32	NZ_MH618673	Escherichia coli strain 838B plasmid p838B-R, complete sequence	32230-32261	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_MG299151	Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_KY471628	Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence	45716-45747	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_MG299131	Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_KY471629	Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence	45716-45747	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_MG299133	Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_MG299128	Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_MG299147	Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence	51276-51307	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NC_018995	Escherichia coli plasmid pHUSEC41-1, complete sequence	29015-29046	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_CP053235	Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence	78292-78323	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_CP005999	Escherichia coli B7A plasmid pEB1, complete sequence	39563-39594	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	KU932021	Escherichia coli plasmid pEC3I, complete sequence	51902-51933	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_CP024154	Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence	18560-18591	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NC_011754	Escherichia coli ED1a plasmid pECOED, complete sequence	49240-49271	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_CP015141	Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence	81434-81465	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_LR213460	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3	28916-28947	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_MH287044	Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence	36182-36213	7	0.781
NZ_CP007442_4	4.10\|2976420\|32\|NZ_CP007442\|PILER-CR	2976420-2976451	32	NZ_MH618673	Escherichia coli strain 838B plasmid p838B-R, complete sequence	32230-32261	7	0.781
NZ_CP007442_5	5.1\|3486907\|42\|NZ_CP007442\|CRISPRCasFinder	3486907-3486948	42	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30214-30255	7	0.833
NZ_CP007442_3	3.2\|2950144\|32\|NZ_CP007442\|PILER-CR,CRT	2950144-2950175	32	NZ_CP006991	Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence	532343-532374	8	0.75
NZ_CP007442_3	3.3\|2950205\|32\|NZ_CP007442\|PILER-CR,CRT	2950205-2950236	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	148991-149022	8	0.75
NZ_CP007442_3	3.3\|2950205\|32\|NZ_CP007442\|PILER-CR,CRT	2950205-2950236	32	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	530640-530671	8	0.75
NZ_CP007442_3	3.6\|2950388\|32\|NZ_CP007442\|PILER-CR,CRT	2950388-2950419	32	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	17977-18008	8	0.75
NZ_CP007442_3	3.6\|2950388\|32\|NZ_CP007442\|PILER-CR,CRT	2950388-2950419	32	NZ_CP017753	Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence	97497-97528	8	0.75
NZ_CP007442_3	3.9\|2950571\|32\|NZ_CP007442\|PILER-CR,CRT	2950571-2950602	32	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	62682-62713	8	0.75
NZ_CP007442_3	3.9\|2950571\|32\|NZ_CP007442\|PILER-CR,CRT	2950571-2950602	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1222106-1222137	8	0.75
NZ_CP007442_3	3.9\|2950571\|32\|NZ_CP007442\|PILER-CR,CRT	2950571-2950602	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2467671-2467702	8	0.75
NZ_CP007442_3	3.9\|2950571\|32\|NZ_CP007442\|PILER-CR,CRT	2950571-2950602	32	NC_008759	Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence	12670-12701	8	0.75
NZ_CP007442_3	3.12\|2950206\|31\|NZ_CP007442\|CRISPRCasFinder	2950206-2950236	31	NZ_CP036297	Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence	14953-14983	8	0.742
NZ_CP007442_3	3.12\|2950206\|31\|NZ_CP007442\|CRISPRCasFinder	2950206-2950236	31	NZ_CP036288	Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence	14983-15013	8	0.742
NZ_CP007442_3	3.12\|2950206\|31\|NZ_CP007442\|CRISPRCasFinder	2950206-2950236	31	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	3454-3484	8	0.742
NZ_CP007442_3	3.12\|2950206\|31\|NZ_CP007442\|CRISPRCasFinder	2950206-2950236	31	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	148992-149022	8	0.742
NZ_CP007442_3	3.15\|2950389\|31\|NZ_CP007442\|CRISPRCasFinder	2950389-2950419	31	NZ_CP017753	Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence	97498-97528	8	0.742
NZ_CP007442_4	4.3\|2976480\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976480-2976511	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1417960-1417991	8	0.75
NZ_CP007442_4	4.11\|2976481\|32\|NZ_CP007442\|PILER-CR	2976481-2976512	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1417960-1417991	8	0.75
NZ_CP007442_5	5.1\|3486907\|42\|NZ_CP007442\|CRISPRCasFinder	3486907-3486948	42	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24899-24940	8	0.81
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	275-323	8	0.837
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14152-14200	8	0.837
NZ_CP007442_3	3.2\|2950144\|32\|NZ_CP007442\|PILER-CR,CRT	2950144-2950175	32	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	35740-35771	9	0.719
NZ_CP007442_3	3.3\|2950205\|32\|NZ_CP007442\|PILER-CR,CRT	2950205-2950236	32	NZ_CP036297	Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence	14953-14984	9	0.719
NZ_CP007442_3	3.3\|2950205\|32\|NZ_CP007442\|PILER-CR,CRT	2950205-2950236	32	NZ_CP036288	Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence	14983-15014	9	0.719
NZ_CP007442_3	3.3\|2950205\|32\|NZ_CP007442\|PILER-CR,CRT	2950205-2950236	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	3454-3485	9	0.719
NZ_CP007442_3	3.6\|2950388\|32\|NZ_CP007442\|PILER-CR,CRT	2950388-2950419	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	405875-405906	9	0.719
NZ_CP007442_3	3.11\|2950145\|31\|NZ_CP007442\|CRISPRCasFinder	2950145-2950175	31	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	35740-35770	9	0.71
NZ_CP007442_3	3.15\|2950389\|31\|NZ_CP007442\|CRISPRCasFinder	2950389-2950419	31	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	405875-405905	9	0.71
NZ_CP007442_3	3.15\|2950389\|31\|NZ_CP007442\|CRISPRCasFinder	2950389-2950419	31	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2248363-2248393	9	0.71
NZ_CP007442_3	3.17\|2950511\|31\|NZ_CP007442\|CRISPRCasFinder	2950511-2950541	31	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	244686-244716	9	0.71
NZ_CP007442_3	3.17\|2950511\|31\|NZ_CP007442\|CRISPRCasFinder	2950511-2950541	31	GU075905	Prochlorococcus phage P-HM2, complete genome	78536-78566	9	0.71
NZ_CP007442_3	3.18\|2950572\|31\|NZ_CP007442\|CRISPRCasFinder	2950572-2950602	31	NC_011987	Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence	86182-86212	9	0.71
NZ_CP007442_5	5.1\|3486907\|42\|NZ_CP007442\|CRISPRCasFinder	3486907-3486948	42	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24786-24827	9	0.786
NZ_CP007442_3	3.6\|2950388\|32\|NZ_CP007442\|PILER-CR,CRT	2950388-2950419	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2248362-2248393	10	0.688
NZ_CP007442_3	3.8\|2950510\|32\|NZ_CP007442\|PILER-CR,CRT	2950510-2950541	32	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	244686-244717	10	0.688
NZ_CP007442_3	3.8\|2950510\|32\|NZ_CP007442\|PILER-CR,CRT	2950510-2950541	32	GU075905	Prochlorococcus phage P-HM2, complete genome	78536-78567	10	0.688
NZ_CP007442_3	3.9\|2950571\|32\|NZ_CP007442\|PILER-CR,CRT	2950571-2950602	32	NC_011987	Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence	86181-86212	10	0.688
NZ_CP007442_4	4.8\|2976785\|32\|NZ_CP007442\|CRISPRCasFinder,CRT	2976785-2976816	32	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	51062-51093	10	0.688
NZ_CP007442_4	4.16\|2976786\|32\|NZ_CP007442\|PILER-CR	2976786-2976817	32	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	51062-51093	10	0.688
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208985-209033	10	0.796
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219479-219527	10	0.796
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	61920-61968	10	0.796
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210313-210361	10	0.796
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191268-191316	10	0.796
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	6786-6834	11	0.776
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14243-14291	11	0.776
NZ_CP007442_6	6.1\|4710793\|49\|NZ_CP007442\|CRISPRCasFinder	4710793-4710841	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87119-87167	12	0.755

1. spacer 2.1|252785|48|NZ_CP007442|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 3, identity: 0.938

tttacgccgcatccggcggttatgcgcagatgcctgatgcgacgctga	CRISPR spacer
tttatgccgcatccggcagttatgcgcagatgcctgatgcgacgctgg	Protospacer
****.************.*****************************.

2. spacer 2.1|252785|48|NZ_CP007442|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 3, identity: 0.938

tttacgccgcatccggcggttatgcgcagatgcctgatgcgacgctga	CRISPR spacer
tttatgccgcatccggcagttatgcgcagatgcctgatgcgacgctgg	Protospacer
****.************.*****************************.

3. spacer 2.1|252785|48|NZ_CP007442|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 3, identity: 0.938

tttacgccgcatccggcggttatgcgcagatgcctgatgcgacgctga	CRISPR spacer
tttatgccgcatccggcagttatgcgcagatgcctgatgcgacgctgg	Protospacer
****.************.*****************************.

4. spacer 2.1|252785|48|NZ_CP007442|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 3, identity: 0.938

tttacgccgcatccggcggttatgcgcagatgcctgatgcgacgctga	CRISPR spacer
tttatgccgcatccggcagttatgcgcagatgcctgatgcgacgctgg	Protospacer
****.************.*****************************.

5. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 6, identity: 0.878

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc--	CRISPR spacer
atgcctgatgcgacgctgtcgcgtcttatcaggcctacag--ccgttgcca	Protospacer
 **** ********************************.*  *** ***

6. spacer 3.12|2950206|31|NZ_CP007442|CRISPRCasFinder matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.774

acgccagccacctgcttcgccagccgttcgg	CRISPR spacer
tggcccatcacctgcttcgccacctgttcgg	Protospacer
  *** ..************** *.******

7. spacer 3.15|2950389|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

cacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
gttggtagcggccctgcgcgtcggtgacgct	Protospacer
  .******* * ****************

8. spacer 3.18|2950572|31|NZ_CP007442|CRISPRCasFinder matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.774

attgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
attgcggatgctgccggcattgcgataggga	Protospacer
************ **** ******  .* .*

9. spacer 3.18|2950572|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

attgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
gatggcgctgctcacggaattgcgcgcgcaa	Protospacer
. **  * ***** ************ ****

10. spacer 3.18|2950572|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

attgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
gatggcgctgctcacggaattgcgcgcgcaa	Protospacer
. **  * ***** ************ ****

11. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_MG299151 (Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

12. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_KY471628 (Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

13. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_MG299131 (Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

14. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_KY471629 (Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

15. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_MG299133 (Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

16. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_MG299128 (Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

17. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_MG299147 (Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

18. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NC_018995 (Escherichia coli plasmid pHUSEC41-1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

19. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_CP053235 (Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

20. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_CP005999 (Escherichia coli B7A plasmid pEB1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

21. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to KU932021 (Escherichia coli plasmid pEC3I, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

22. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_CP024154 (Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

23. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NC_011754 (Escherichia coli ED1a plasmid pECOED, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

24. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_CP015141 (Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

25. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_LR213460 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

26. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_MH287044 (Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

27. spacer 4.2|2976419|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_MH618673 (Escherichia coli strain 838B plasmid p838B-R, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

28. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_MG299151 (Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

29. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_KY471628 (Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

30. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_MG299131 (Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

31. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_KY471629 (Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

32. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_MG299133 (Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

33. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_MG299128 (Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

34. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_MG299147 (Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

35. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NC_018995 (Escherichia coli plasmid pHUSEC41-1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

36. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_CP053235 (Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

37. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_CP005999 (Escherichia coli B7A plasmid pEB1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

38. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to KU932021 (Escherichia coli plasmid pEC3I, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

39. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_CP024154 (Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

40. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NC_011754 (Escherichia coli ED1a plasmid pECOED, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

41. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_CP015141 (Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

42. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_LR213460 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

43. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_MH287044 (Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

44. spacer 4.10|2976420|32|NZ_CP007442|PILER-CR matches to NZ_MH618673 (Escherichia coli strain 838B plasmid p838B-R, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

45. spacer 5.1|3486907|42|NZ_CP007442|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.833

acgtaggtcagataaggtgtttacgccgcatccgactgctgt	CRISPR spacer
gcgtaggccagataaggcgtttacgccgcatccggcatttgt	Protospacer
.******.*********.****************.*  .***

46. spacer 3.2|2950144|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75

ggatctgccagcgcctctgcggggcggtaaac	CRISPR spacer
ggatcggccagcgcatctgcgggaggatgatg	Protospacer
***** ******** ********. *.*.*

47. spacer 3.3|2950205|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
ttccgcagccgcctccttcgccagccgtaccc	Protospacer
* *  *****.*** ************* *

48. spacer 3.3|2950205|32|NZ_CP007442|PILER-CR,CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
ctggcccatcacctgcttcgccacctgttcgg	Protospacer
.  *** ..************** *.******

49. spacer 3.6|2950388|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
agttggtagcggccctgcgcgtcggtgacgct	Protospacer
   .******* * ****************

50. spacer 3.6|2950388|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP017753 (Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
ttgaagaagcgcgactgcgcgtcggtgacgtc	Protospacer
*.. .* ***** *****************

51. spacer 3.9|2950571|32|NZ_CP007442|PILER-CR,CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

aattgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
gattgcggatgctgccggcattgcgataggga	Protospacer
.************ **** ******  .* .*

52. spacer 3.9|2950571|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

aattgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
tgatggcgctgctcacggaattgcgcgcgcaa	Protospacer
 . **  * ***** ************ ****

53. spacer 3.9|2950571|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

aattgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
tgatggcgctgctcacggaattgcgcgcgcaa	Protospacer
 . **  * ***** ************ ****

54. spacer 3.9|2950571|32|NZ_CP007442|PILER-CR,CRT matches to NC_008759 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence) position: , mismatch: 8, identity: 0.75

aattgcggatgctcccggaa-----ttgcgcgggcaa	CRISPR spacer
aaatgcggatgctcccggaaatgagtttcacg-----	Protospacer
** *****************     ** *.**

55. spacer 3.12|2950206|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP036297 (Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence) position: , mismatch: 8, identity: 0.742

acgccagccacctgcttcgccagccgttcgg	CRISPR spacer
acgcaagccacctgcatcgccagctgccgct	Protospacer
**** ********** ********.*..

56. spacer 3.12|2950206|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP036288 (Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence) position: , mismatch: 8, identity: 0.742

acgccagccacctgcttcgccagccgttcgg	CRISPR spacer
acgcaagccacctgcatcgccagctgccgct	Protospacer
**** ********** ********.*..

57. spacer 3.12|2950206|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 8, identity: 0.742

acgccagccacctgcttcgccagccgttcgg	CRISPR spacer
tcggcagccacctgctgcgccagctgcgcaa	Protospacer
 ** ************ *******.*. *..

58. spacer 3.12|2950206|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

acgccagccacctgcttcgccagccgttcgg	CRISPR spacer
tccgcagccgcctccttcgccagccgtaccc	Protospacer
 *  *****.*** ************* *

59. spacer 3.15|2950389|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP017753 (Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

cacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
tgaagaagcgcgactgcgcgtcggtgacgtc	Protospacer
.. .* ***** *****************

60. spacer 4.3|2976480|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tggttcactcacgcaacgtctgagcgcgttga	CRISPR spacer
cggggtaatcacgcaacgtccgaccgcgttgt	Protospacer
.**  .* ************.** *******

61. spacer 4.11|2976481|32|NZ_CP007442|PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tggttcactcacgcaacgtctgagcgcgttga	CRISPR spacer
cggggtaatcacgcaacgtccgaccgcgttgt	Protospacer
.**  .* ************.** *******

62. spacer 5.1|3486907|42|NZ_CP007442|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 8, identity: 0.81

acgtaggtcagataaggtgtttacgccgcatccgactgctgt	CRISPR spacer
ttgtaggtcggataaggcgtttacgccgcatccgacatcaat	Protospacer
 .*******.*******.******************  * .*

63. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 8, identity: 0.837

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc-	CRISPR spacer
atgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa-ccgttacc	Protospacer
 **** ********************************... *** *.*

64. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 8, identity: 0.837

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc--	CRISPR spacer
acgcctgatgcgtcgctgtcgcgtcttatcaggcctacag--ccgttgccg	Protospacer
 .*** ****** *************************.*  *** ***

65. spacer 3.2|2950144|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ggatctgccagcgcctctgcggggcggtaaac	CRISPR spacer
gtcgctgccagcgcctcggcgaggcggtctcg	Protospacer
*   ************* ***.******

66. spacer 3.3|2950205|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP036297 (Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence) position: , mismatch: 9, identity: 0.719

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
cacgcaagccacctgcatcgccagctgccgct	Protospacer
.**** ********** ********.*..

67. spacer 3.3|2950205|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP036288 (Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence) position: , mismatch: 9, identity: 0.719

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
cacgcaagccacctgcatcgccagctgccgct	Protospacer
.**** ********** ********.*..

68. spacer 3.3|2950205|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 9, identity: 0.719

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
ctcggcagccacctgctgcgccagctgcgcaa	Protospacer
. ** ************ *******.*. *..

69. spacer 3.6|2950388|32|NZ_CP007442|PILER-CR,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
ttgaagaagcgcgactgcgcgtcagtgacgtc	Protospacer
*.. .* ***** **********.******

70. spacer 3.11|2950145|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.71

gatctgccagcgcctctgcggggcggtaaac	CRISPR spacer
tcgctgccagcgcctcggcgaggcggtctcg	Protospacer
   ************* ***.******

71. spacer 3.15|2950389|31|NZ_CP007442|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

cacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
tgaagaagcgcgactgcgcgtcagtgacgtc	Protospacer
.. .* ***** **********.******

72. spacer 3.15|2950389|31|NZ_CP007442|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.71

cacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
ggacgtcgcgccactgggcgtcggtgatgtc	Protospacer
 .  ** ********* **********.*

73. spacer 3.17|2950511|31|NZ_CP007442|CRISPRCasFinder matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

taattcgcaaatcaatatatattttgtccgt	CRISPR spacer
attttcggaaatcaatctatattttgcctca	Protospacer
   **** ******** *********.*.

74. spacer 3.17|2950511|31|NZ_CP007442|CRISPRCasFinder matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 9, identity: 0.71

taattcgcaaatcaatatatattttgtccgt	CRISPR spacer
cagaagtaaaatcaatatataatttttccgt	Protospacer
.*.     ************* *** *****

75. spacer 3.18|2950572|31|NZ_CP007442|CRISPRCasFinder matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 9, identity: 0.71

attgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
ccagcggatgctcctcgaattgcgcggtagc	Protospacer
 . ***********. ***********  .

76. spacer 5.1|3486907|42|NZ_CP007442|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.786

acgtaggtcagataaggtgtttacgccgcatccgactgctgt	CRISPR spacer
ttgtaggtcggataaggcgtttacgccgcatccgacatcaac	Protospacer
 .*******.*******.******************  * ..

77. spacer 3.6|2950388|32|NZ_CP007442|PILER-CR,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

tcacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
gggacgtcgcgccactgggcgtcggtgatgtc	Protospacer
  .  ** ********* **********.*

78. spacer 3.8|2950510|32|NZ_CP007442|PILER-CR,CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ataattcgcaaatcaatatatattttgtccgt	CRISPR spacer
tattttcggaaatcaatctatattttgcctca	Protospacer
    **** ******** *********.*.

79. spacer 3.8|2950510|32|NZ_CP007442|PILER-CR,CRT matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 10, identity: 0.688

ataattcgcaaatcaatatatattttgtccgt	CRISPR spacer
ccagaagtaaaatcaatatataatttttccgt	Protospacer
 .*.     ************* *** *****

80. spacer 3.9|2950571|32|NZ_CP007442|PILER-CR,CRT matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 10, identity: 0.688

aattgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
cccagcggatgctcctcgaattgcgcggtagc	Protospacer
  . ***********. ***********  .

81. spacer 4.8|2976785|32|NZ_CP007442|CRISPRCasFinder,CRT matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 10, identity: 0.688

actaaacttaatgatggccgttacagcgtgga	CRISPR spacer
gagtaacttaatgatgggcgtcacagcagcgg	Protospacer
.   ************* ***.*****.  *.

82. spacer 4.16|2976786|32|NZ_CP007442|PILER-CR matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 10, identity: 0.688

actaaacttaatgatggccgttacagcgtgga	CRISPR spacer
gagtaacttaatgatgggcgtcacagcagcgg	Protospacer
.   ************* ***.*****.  *.

83. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc----	CRISPR spacer
atgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
 **** ************ *******************    **. **.

84. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc----	CRISPR spacer
atgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
 **** ************ *******************    **. **.

85. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacg--ggtccggtgc	CRISPR spacer
atgccagatgcgacgctggcgcgtcttatctggcctacgaagggctaac--	Protospacer
 ***************** *********** ********  ** *....

86. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc----	CRISPR spacer
atgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
 **** ************ *******************    **. **.

87. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc----	CRISPR spacer
atgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
 **** ************ *******************    **. **.

88. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.776

ttgccagatgcgacgctgtcgcgtcttatcaggcctac--gggtccggtgc	CRISPR spacer
atgccagatgcgacgctgacgcgtcttatctggcctacaaagggctaac--	Protospacer
 ***************** *********** *******  .** *....

89. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc	CRISPR spacer
gcgcctgatgcgccgctgtcgcgtcttatcaggcctacaaatcgtttcc	Protospacer
 .*** ****** *************************...**   * *

90. spacer 6.1|4710793|49|NZ_CP007442|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc	CRISPR spacer
atgcctgatgcgacgctgccgcgtcttatcaggcctacaaaatcaatcg	Protospacer
 **** ************.*******************... .*..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

487190 : 544467

Enterobacteria_phage(37.04%)

holin,protease,lysis,integrase,tRNA,tail

attL 526164:526210|attR 547698:547744

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295836.1\|487190_487814_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_001110573.1\|487784_488471_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-33	35.6
WP_048943163.1\|488467_490882_+	ABC transporter permease	NA	NA	NA	NA
WP_001157933.1\|491592_492687_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_000460145.1\|492755_493682_-	HTH-type transcriptional activator AllS	NA	NA	NA	NA
WP_000776385.1\|493911_494394_+	ureidoglycolate lyase	NA	NA	NA	NA
WP_000141275.1\|494471_495287_+	HTH-type transcriptional repressor AllR	NA	NA	NA	NA
WP_001096881.1\|495376_497158_+	glyoxylate carboligase	E4WLQ6	Ostreococcus_tauri_virus	3.5e-38	27.0
WP_000943556.1\|497170_497947_+	hydroxypyruvate isomerase	NA	NA	NA	NA
WP_000765839.1\|498046_498925_+	2-hydroxy-3-oxopropionate reductase	NA	NA	NA	NA
WP_000006885.1\|500607_501969_+	allantoinase AllB	NA	NA	NA	NA
WP_015364437.1\|502025_503327_+	uracil/xanthine transporter	NA	NA	NA	NA
WP_001299453.1\|503348_504494_+	glycerate 3-kinase	W6LM47	Streptococcus_phage	1.8e-48	41.7
WP_000540949.1\|504721_505507_-	(S)-ureidoglycine aminohydrolase	NA	NA	NA	NA
WP_001391127.1\|505517_506753_-	allantoate deiminase	NA	NA	NA	NA
WP_000700769.1\|506774_507824_-	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_000580861.1\|508140_509808_+	acyl-CoA synthetase FdrA	NA	NA	NA	NA
WP_048943166.1\|509817_511077_+	DUF1116 domain-containing protein	NA	NA	NA	NA
WP_001298986.1\|511087_511903_+	DUF2877 domain-containing protein	NA	NA	NA	NA
WP_000855355.1\|511899_512793_+	carbamate kinase	NA	NA	NA	NA
WP_000815573.1\|512929_513997_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_001295318.1\|513993_514503_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_000212251.1\|514620_515343_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_000255997.1\|515345_515840_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_000912345.1\|516013_517399_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8
WP_001143558.1\|517434_517956_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000190288.1\|518063_518276_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_000729160.1\|518277_519144_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
WP_000776555.1\|519614_520157_+	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
WP_000988366.1\|520376_521069_+	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_000691050.1\|523720_524728_+	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_001323731.1\|524738_525254_+	fimbria assembly protein	NA	NA	NA	NA
WP_000805432.1\|525256_525889_-	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA
526164:526210	attL	NA	NA	NA	NA
WP_001298992.1\|526223_527387_-\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.0e-200	86.6
WP_000433947.1\|527242_527614_-	helix-turn-helix domain-containing protein	S5FM74	Shigella_phage	1.6e-46	81.9
WP_000206733.1\|527613_527919_-	hypothetical protein	U5P0J0	Shigella_phage	3.4e-50	99.0
WP_001242748.1\|527918_528281_-	hypothetical protein	U5P092	Shigella_phage	1.0e-66	99.2
WP_000008200.1\|528271_528808_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	4.3e-101	100.0
WP_000081308.1\|528935_529760_-	DUF2303 family protein	U5P439	Shigella_phage	5.0e-149	99.6
WP_000135682.1\|529825_530188_-	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_000453587.1\|530285_530831_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
WP_000881608.1\|531395_531578_-	hypothetical protein	NA	NA	NA	NA
WP_000830178.1\|531784_532111_-	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_000738425.1\|532591_532885_+	increased serum survival lipoprotein Iss	C6ZCX3	Enterobacteria_phage	1.6e-44	91.8
WP_001228695.1\|532975_533158_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_000992107.1\|533374_533908_-	lysozyme	K7PLY1	Enterobacteria_phage	1.1e-99	95.5
WP_000370549.1\|534013_534286_+	hypothetical protein	NA	NA	NA	NA
WP_000250557.1\|534251_534596_-	YdfR family protein	K7PGU6	Enterobacteria_phage	3.5e-35	90.5
WP_000284486.1\|534600_534816_-\|holin	holin	M1FN85	Enterobacteria_phage	1.0e-32	95.8
WP_077790673.1\|535909_536974_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	3.0e-202	97.7
WP_000917724.1\|537120_537324_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000357056.1\|537643_538663_+	hypothetical protein	A0A0R6PIZ6	Moraxella_phage	2.4e-39	32.5
WP_072310695.1\|541472_541592_+\|tail	phage tail protein	K7PMH7	Enterobacteria_phage	6.3e-13	89.7
WP_000086527.1\|541689_542280_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_000836769.1\|542655_542889_-	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	6.4e-33	88.3
WP_001372053.1\|542957_543071_-	hypothetical protein	A0A1C9IHU6	Salmonella_phage	1.4e-06	77.8
WP_000239874.1\|543436_544105_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937502.1\|544161_544467_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.8e-12	76.5
547698:547744	attR	NA	NA	NA	NA

DBSCAN-SWA_2

856402 : 869568

Salmonella_phage(82.35%)

tail,integrase

attL 849288:849301|attR 876179:876192

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
849288:849301	attL	NA	NA	NA	NA
WP_000290933.1\|856402_857455_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	3.6e-107	57.3
WP_001321204.1\|857641_857833_-	hypothetical protein	A0A0R6PIH8	Moraxella_phage	4.0e-09	68.2
WP_001047324.1\|857848_858418_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	4.2e-38	42.9
WP_001247707.1\|858543_858765_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|858797_859307_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000956182.1\|859314_859515_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	7.1e-33	98.5
WP_000963472.1\|859478_859820_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	1.3e-55	98.2
WP_048943175.1\|859887_860121_+	DUF2732 family protein	E5G6L6	Salmonella_phage	7.0e-32	96.1
WP_000752619.1\|860120_860348_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	3.5e-36	98.7
WP_000104150.1\|860344_861199_+	DNA adenine methylase	E5G6L8	Salmonella_phage	7.5e-148	90.5
WP_001420002.1\|861204_862026_+	hypothetical protein	A0A0M4RCP6	Salmonella_phage	1.1e-122	75.7
WP_001109970.1\|862025_864398_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.2
WP_001154433.1\|864551_864740_+	hypothetical protein	E5G6M0	Salmonella_phage	1.4e-27	100.0
WP_001217579.1\|864750_864984_+	DinI family protein	E5G6M1	Salmonella_phage	1.0e-35	98.7
WP_000286099.1\|865359_866091_+	hypothetical protein	NA	NA	NA	NA
WP_000549632.1\|866090_866708_+	TIR domain-containing protein	NA	NA	NA	NA
WP_001701630.1\|867224_867680_+	hypothetical protein	E5G6Q1	Salmonella_phage	3.7e-45	71.0
WP_000980391.1\|867676_868162_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.7e-67	81.2
WP_001011758.1\|868158_869259_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	3.8e-176	87.7
WP_000972391.1\|869349_869568_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
876179:876192	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1588624 : 1631000

Enterobacteria_phage(36.36%)

portal,terminase,integrase,lysis,tail

attL 1594787:1594801|attR 1629922:1629936

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001613101.1\|1588624_1589206_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.0e-100	91.7
WP_071886289.1\|1589205_1592736_-	short-chain fatty acid transporter	X2KTY7	Enterobacteria_phage	1.9e-11	35.5
WP_032236520.1\|1592800_1593400_-	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	1.7e-106	94.5
WP_048943199.1\|1593467_1596947_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.5
1594787:1594801	attL	NA	NA	NA	NA
WP_000090847.1\|1597007_1597610_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.8e-87	85.1
WP_130559428.1\|1597546_1598794_-	hypothetical protein	A0A291AWT6	Escherichia_phage	1.3e-167	99.3
WP_077688660.1\|1598738_1600319_-\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	2.4e-288	99.4
WP_001072975.1\|1600246_1600459_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_001700320.1\|1600455_1602558_-\|terminase	phage terminase large subunit family protein	K7PH40	Enterobacteria_phage	0.0e+00	99.9
WP_000373426.1\|1602557_1603052_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	2.2e-83	99.4
WP_023567552.1\|1603623_1604316_+	hypothetical protein	NA	NA	NA	NA
WP_000700651.1\|1604484_1605021_-	hypothetical protein	K7PHH7	Enterobacteria_phage	1.1e-72	83.5
WP_001101168.1\|1605017_1605560_-	lysozyme	Q08J98	Stx2-converting_phage	3.0e-94	87.8
WP_000370545.1\|1605665_1605938_+	hypothetical protein	NA	NA	NA	NA
WP_000192451.1\|1605903_1606248_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.2e-37	95.2
WP_000839561.1\|1606252_1606468_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	5.9e-33	95.8
WP_072162994.1\|1606719_1607094_-	tolA family protein	NA	NA	NA	NA
WP_000506934.1\|1607265_1607694_-	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_000562553.1\|1608060_1608192_-	DUF3927 family protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
WP_023567548.1\|1609097_1609919_-	antitermination protein	K7PKS8	Enterobacteria_phage	4.5e-81	54.0
WP_000904112.1\|1609915_1610290_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	8.4e-35	62.7
WP_023567547.1\|1610302_1611352_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.4e-108	54.3
WP_032140164.1\|1611353_1611632_-	hypothetical protein	A0A077KB22	Edwardsiella_phage	6.1e-06	37.1
WP_000980999.1\|1611698_1611950_-	hypothetical protein	NA	NA	NA	NA
WP_000887491.1\|1612166_1612379_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.7e-29	97.1
WP_001546200.1\|1612423_1612531_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	2.5e-08	96.6
WP_022645725.1\|1613393_1614416_-	hypothetical protein	Q858S2	Enterobacteria_phage	2.5e-105	62.4
WP_001151189.1\|1614615_1615017_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.4e-64	95.5
WP_000054505.1\|1615057_1616023_-	hypothetical protein	U5P0A0	Shigella_phage	2.9e-55	61.2
WP_023567544.1\|1616003_1616525_-	phage regulatory protein CII	NA	NA	NA	NA
WP_000476993.1\|1616508_1616736_-	transcriptional regulator	NA	NA	NA	NA
WP_048943200.1\|1616813_1617221_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	3.3e-24	46.2
WP_000379589.1\|1617413_1617569_+	DUF1391 family protein	M4QQ57	Salicola_phage	8.8e-07	51.1
WP_000344950.1\|1617570_1618146_+	hypothetical protein	NA	NA	NA	NA
WP_000854559.1\|1618632_1618821_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001083276.1\|1618817_1619009_+\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_041520819.1\|1619102_1621574_+	exonuclease	A0A192Y6E0	Salmonella_phage	1.2e-57	56.1
WP_001296941.1\|1621661_1621898_+	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
WP_001459782.1\|1621932_1623213_+\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	2.3e-156	62.6
WP_001389342.1\|1623214_1623343_-	hypothetical protein	NA	NA	NA	NA
WP_000836058.1\|1623400_1624420_-	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	4.3e-17	26.2
WP_001295394.1\|1624431_1625646_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000598292.1\|1625851_1626178_-	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
WP_000705211.1\|1626312_1626654_+	DUF1283 family protein	NA	NA	NA	NA
WP_001138581.1\|1626688_1627249_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_001321287.1\|1627251_1627962_-	YnfC family lipoprotein	NA	NA	NA	NA
WP_001307224.1\|1628069_1628375_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_000041556.1\|1628573_1631000_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	7.7e-214	49.0
1629922:1629936	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2235727 : 2245169

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001292773.1\|2235727_2236864_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	3.2e-162	97.4
WP_001374182.1\|2236860_2238861_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.3
WP_001295429.1\|2238985_2239447_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_001295430.1\|2239487_2239958_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|2240004_2240724_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|2240720_2242406_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240401.1\|2242627_2243359_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|2243418_2243526_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|2243506_2244238_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569361.1\|2244242_2245169_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8

DBSCAN-SWA_5

2314805 : 2329671

Shigella_phage(33.33%)

tail,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085947917.1\|2314805_2316078_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_000834400.1\|2316257_2318147_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_001700849.1\|2318400_2318790_+	hypothetical protein	F1BUP1	Erwinia_phage	7.2e-13	43.8
WP_001106825.1\|2318811_2319252_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	6.2e-53	70.3
WP_000994390.1\|2319223_2319634_-\|tail	phage tail assembly protein	U5P0S4	Shigella_phage	8.6e-25	80.3
WP_000184049.1\|2319987_2320377_+	hypothetical protein	A0A1L5C299	Pseudoalteromonas_phage	1.7e-38	65.5
WP_000522147.1\|2320558_2320828_-	hypothetical protein	G8C7W1	Escherichia_phage	5.3e-23	72.4
WP_001076627.1\|2320835_2321450_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	5.0e-93	81.9
WP_000422365.1\|2321449_2321731_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	9.7e-20	46.2
WP_001283162.1\|2321717_2322104_-	membrane protein	A0A192Y8P2	Salmonella_phage	9.2e-61	99.2
WP_000120164.1\|2322212_2323007_-	hypothetical protein	NA	NA	NA	NA
WP_000779379.1\|2323216_2323486_-	hypothetical protein	NA	NA	NA	NA
WP_000135682.1\|2324876_2325239_+	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_000081308.1\|2325304_2326129_+	DUF2303 family protein	U5P439	Shigella_phage	5.0e-149	99.6
WP_000008200.1\|2326256_2326793_+	5'-deoxynucleotidase	U5P0T3	Shigella_phage	4.3e-101	100.0
WP_001242758.1\|2326783_2327146_+	hypothetical protein	K7PH61	Enterobacteria_phage	5.8e-65	95.8
WP_001096409.1\|2327421_2327631_+	hypothetical protein	NA	NA	NA	NA
WP_000741303.1\|2327633_2328836_+	hypothetical protein	A0A2D1GN00	Marinobacter_phage	6.2e-31	30.2
WP_000561018.1\|2328819_2329671_-	hypothetical protein	I6PD67	Cronobacter_phage	4.6e-36	36.2

DBSCAN-SWA_6

2502750 : 2538510

Enterobacteria_phage(43.18%)

integrase,head,capsid

attL 2500724:2500740|attR 2540975:2540991

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2500724:2500740	attL	NA	NA	NA	NA
WP_000368131.1\|2502750_2503683_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
WP_048943225.1\|2503994_2505152_+\|integrase	prophage integrase IntS	A5VW56	Enterobacteria_phage	4.1e-221	99.0
WP_048943226.1\|2505243_2507250_-	hypothetical protein	A0A088FRU0	Escherichia_phage	5.6e-234	63.1
WP_001407254.1\|2507352_2507640_+	Arc family DNA-binding protein	A0A088CPT2	Enterobacteria_phage	7.9e-25	64.2
WP_001085631.1\|2507654_2507876_-	hypothetical protein	NA	NA	NA	NA
WP_021563791.1\|2507875_2508604_-	hypothetical protein	A0A0P0ZDC0	Stx2-converting_phage	8.0e-74	62.7
WP_048943227.1\|2508691_2509402_-	hypothetical protein	H6WRU8	Salmonella_phage	8.1e-87	71.0
WP_024191015.1\|2509391_2509565_-	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	4.3e-18	87.3
WP_032149107.1\|2509688_2509940_+	Arc family DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	2.8e-10	71.4
WP_048943228.1\|2510651_2512484_-	hypothetical protein	A0A2H4FNB8	Salmonella_phage	2.2e-290	97.3
WP_023486185.1\|2512480_2513896_-	phage DNA ejection protein	I6RSG0	Salmonella_phage	1.3e-200	80.7
WP_048943229.1\|2513906_2514602_-	hypothetical protein	A0A2H4FUQ9	Salmonella_phage	3.4e-114	97.4
WP_000627636.1\|2514604_2515060_-	DUF2824 family protein	A0A2D1GLX4	Escherichia_phage	2.3e-87	99.3
WP_033558932.1\|2515059_2515761_-	hypothetical protein	G5DA78	Enterobacteria_phage	2.5e-117	98.3
WP_021529423.1\|2515760_2516255_-	hypothetical protein	A0A1U9HWQ1	Salmonella_phage	5.1e-32	46.0
WP_048943230.1\|2516257_2517676_-	Packaged DNA stabilization protein gp10	Q716G7	Shigella_phage	3.9e-274	98.7
WP_000246750.1\|2517684_2518167_-	packaged DNA stabilization protein p27	Q716G8	Shigella_phage	3.8e-88	100.0
WP_000375639.1\|2518141_2518327_-	hypothetical protein	Q716G9	Shigella_phage	4.6e-26	98.4
WP_048943231.1\|2518369_2519641_-\|head	head protein	Q716H0	Shigella_phage	2.8e-239	99.3
WP_033803105.1\|2519652_2520537_-\|capsid	phage capsid scaffolding protein	Q716H1	Shigella_phage	4.0e-144	99.7
WP_000566866.1\|2521818_2521989_-	protein ninF	K7PLU6	Enterobacteria_phage	2.5e-26	100.0
WP_016063117.1\|2521985_2522168_-	NinE family protein	K7PH28	Enterobacteria_phage	7.4e-29	100.0
WP_048943232.1\|2522164_2522692_-	phage N-6-adenine-methyltransferase	G8EYI1	Enterobacteria_phage	1.2e-100	99.4
WP_039022135.1\|2522688_2523111_-	hypothetical protein	A0A2H4FNF5	Salmonella_phage	4.8e-63	80.7
WP_048943233.1\|2523103_2523331_-	hypothetical protein	A0A1I9LJP7	Stx_converting_phage	1.0e-27	87.1
WP_021552861.1\|2523419_2524856_-	AAA family ATPase	G5DA90	Enterobacteria_phage	1.0e-274	99.8
WP_016063113.1\|2524845_2525745_-	DNA replication protein O	K7PH26	Enterobacteria_phage	1.2e-164	100.0
WP_000166207.1\|2525737_2525884_-	DUF2740 family protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_000424164.1\|2525918_2526197_-	transcriptional regulator	A0A220NRS4	Escherichia_phage	3.6e-43	100.0
WP_000276886.1\|2526305_2526491_-	hypothetical protein	A5VW97	Enterobacteria_phage	1.6e-26	100.0
WP_000856967.1\|2526571_2527222_+	LexA family transcriptional regulator	A5VW98	Enterobacteria_phage	1.1e-122	100.0
WP_048943234.1\|2527827_2528127_+	hypothetical protein	A5VW99	Enterobacteria_phage	4.5e-31	97.0
WP_000972063.1\|2528529_2528664_+	hypothetical protein	K7PHK2	Enterobacteria_phage	3.1e-16	100.0
WP_001243355.1\|2528648_2528801_+	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	4.7e-21	100.0
WP_033803013.1\|2529055_2529763_+	recombinase	K7PKU3	Enterobacteria_phage	1.1e-136	99.1
WP_048943236.1\|2529763_2530237_+	single-stranded DNA-binding protein	G8EYH4	Enterobacteria_phage	2.5e-60	96.8
WP_001111280.1\|2530739_2531036_+	DUF2856 family protein	A0A220NRR0	Escherichia_phage	2.3e-51	100.0
WP_001214452.1\|2531046_2531211_+	DUF2737 family protein	A0A2I6PID4	Escherichia_phage	4.6e-22	98.1
WP_048943237.1\|2531207_2531669_+	hypothetical protein	A0A2P1MXC5	Escherichia_phage	4.5e-54	72.3
WP_048943238.1\|2531665_2531983_+	hypothetical protein	A0A088CQ13	Enterobacteria_phage	4.7e-47	93.0
WP_048943239.1\|2532038_2532710_+	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	2.6e-50	84.7
WP_048943240.1\|2532794_2533079_+	hypothetical protein	NA	NA	NA	NA
WP_001336413.1\|2533056_2533209_+	hypothetical protein	Q71T70	Escherichia_phage	5.1e-07	73.7
WP_048943241.1\|2533427_2533772_+	hypothetical protein	A0A0P0ZB93	Stx2-converting_phage	2.9e-58	98.2
WP_001163428.1\|2533897_2534098_+	response regulator inhibitor TorI	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
WP_001274871.1\|2535946_2536861_-	aminoimidazole riboside kinase	NA	NA	NA	NA
WP_000194515.1\|2537076_2538510_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	7.0e-29	25.4
2540975:2540991	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2763113 : 2856609

Salmonella_phage(62.5%)

portal,terminase,capsid,integrase,head,lysis,tRNA,transposase,tail,plate

attL 2817774:2817789|attR 2851479:2851494

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001356308.1\|2763113_2763851_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219193.1\|2763982_2765317_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_000365855.1\|2765525_2766407_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000189203.1\|2766509_2767097_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627807.1\|2767152_2767536_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	1.4e-32	72.0
WP_001262716.1\|2767840_2768530_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	7.1e-56	48.8
WP_000997403.1\|2768577_2769615_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098726.1\|2769821_2770241_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_000138184.1\|2770309_2771008_+	DTW domain-containing protein	NA	NA	NA	NA
WP_000082969.1\|2771039_2773700_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000949265.1\|2773813_2775169_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_000464877.1\|2775193_2775538_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000841103.1\|2775534_2776833_-	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	1.3e-45	32.2
WP_001235102.1\|2782696_2785270_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000040129.1\|2785399_2786131_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079100.1\|2786127_2787108_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197686.1\|2787242_2787980_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178456.1\|2788250_2788592_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_001700969.1\|2788695_2788743_+	hypothetical protein	NA	NA	NA	NA
WP_000200101.1\|2788841_2790002_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000225221.1\|2790044_2791166_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168045.1\|2791176_2792247_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
WP_000976004.1\|2792456_2792822_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001212391.1\|2792971_2793490_+	YfiR family protein	NA	NA	NA	NA
WP_000969010.1\|2793479_2794706_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_000589828.1\|2794721_2795204_+	OmpA family protein	NA	NA	NA	NA
WP_000065253.1\|2795279_2795627_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000264777.1\|2795668_2796436_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043335.1\|2796466_2797015_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256450.1\|2797033_2797282_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460035.1\|2797418_2798780_-	signal recognition particle protein	NA	NA	NA	NA
WP_001189257.1\|2798871_2799738_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_010723175.1\|2799758_2801045_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001296310.1\|2801099_2801693_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059169.1\|2801815_2802694_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880910.1\|2802779_2804441_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203437.1\|2804589_2804931_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001117838.1\|2804992_2805283_-	RnfH family protein	NA	NA	NA	NA
WP_000600189.1\|2805272_2805749_-	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_000162574.1\|2805880_2806363_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
WP_000391795.1\|2807063_2807546_+	hypothetical protein	Q19UP0	Mannheimia_phage	2.7e-17	34.3
WP_000980501.1\|2807572_2807791_-	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-28	77.8
WP_048943246.1\|2807859_2808960_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	1.7e-176	88.3
WP_000980413.1\|2808956_2809442_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	6.3e-67	80.6
WP_048943247.1\|2809438_2812516_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	62.9
WP_000763311.1\|2812508_2812628_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
WP_001281009.1\|2812642_2812945_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
WP_001207660.1\|2812999_2813515_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
WP_048943248.1\|2813524_2814697_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-202	90.0
WP_021566195.1\|2814839_2815406_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	8.4e-87	86.3
WP_021579679.1\|2815436_2815976_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.1e-56	63.0
WP_021549529.1\|2815975_2816578_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	2.4e-100	92.5
WP_032349848.1\|2816549_2816990_-\|tail	phage tail fiber protein	A0A0F7LDZ0	Escherichia_phage	8.9e-44	59.9
WP_048943249.1\|2816991_2818350_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	8.9e-151	79.3
2817774:2817789	attL	NA	NA	NA	NA
WP_001086836.1\|2818346_2818952_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.5e-110	92.5
WP_000268317.1\|2818944_2819853_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.7e-143	90.7
WP_048943250.1\|2819839_2820199_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	1.4e-50	84.9
WP_000993775.1\|2820195_2820774_-\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	4.2e-94	87.0
WP_000829157.1\|2820842_2821289_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.9e-62	84.9
WP_001039949.1\|2821281_2821713_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.7e-71	93.7
WP_001080916.1\|2821808_2822237_-\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	3.8e-47	76.1
WP_000727850.1\|2822233_2822611_-	hypothetical protein	NA	NA	NA	NA
WP_001069905.1\|2822612_2823125_-	lysozyme	E5G6N1	Salmonella_phage	3.1e-88	92.3
WP_000171568.1\|2823105_2823321_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
WP_000868175.1\|2823324_2823528_-\|tail	tail protein X	E5G6M9	Salmonella_phage	1.4e-31	92.5
WP_000673530.1\|2823527_2823992_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.9e-76	89.0
WP_000059191.1\|2824087_2824738_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_000742511.1\|2824741_2825800_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
WP_000216238.1\|2825815_2826649_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	2.2e-123	91.3
WP_001098431.1\|2826791_2828558_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
WP_048943251.1\|2828557_2829589_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	88.2
WP_047662251.1\|2829634_2831416_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_001217575.1\|2831733_2831967_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154434.1\|2831977_2832166_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_048943252.1\|2832320_2834735_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.6
WP_043856316.1\|2834731_2835589_-	DNA adenine methylase	E5G6L8	Salmonella_phage	1.9e-162	97.9
WP_000752619.1\|2835585_2835813_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	3.5e-36	98.7
WP_001244207.1\|2835812_2836046_-	DUF2732 family protein	E5G6L6	Salmonella_phage	8.3e-33	97.4
WP_000996717.1\|2836113_2836455_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	1.7e-55	98.2
WP_000956191.1\|2836572_2836869_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.4e-21	88.5
WP_000460855.1\|2836876_2837386_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	1.9e-82	93.5
WP_000102105.1\|2837418_2837661_-	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	6.8e-38	97.5
WP_000052558.1\|2837777_2838410_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	5.9e-65	57.6
WP_000155498.1\|2838413_2839454_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.7e-189	92.7
WP_048943253.1\|2839443_2840490_+	hypothetical protein	NA	NA	NA	NA
WP_001062342.1\|2840786_2842016_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	4.6e-207	86.6
WP_000135615.1\|2842298_2843855_+	recombinase family protein	A0A0A7RTP8	Clostridium_phage	3.2e-19	30.0
WP_000936465.1\|2843844_2844741_+	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_000614783.1\|2844737_2845634_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_000101606.1\|2847230_2848778_+	SAM-dependent DNA methyltransferase	A0A2H4PQP4	Staphylococcus_phage	4.2e-48	27.6
WP_001356249.1\|2848774_2849968_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	5.4e-19	34.7
WP_001096907.1\|2850026_2853266_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	3.7e-62	28.5
2851479:2851494	attR	NA	NA	NA	NA
WP_001356251.1\|2854495_2855365_+	hypothetical protein	NA	NA	NA	NA
WP_085947917.1\|2855335_2856609_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3

DBSCAN-SWA_8

2929445 : 2942628

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272924.1\|2929445_2932007_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
WP_001141340.1\|2932112_2932769_+	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	8.0e-49	46.3
WP_001272549.1\|2932819_2933617_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	5.9e-70	56.3
WP_000847985.1\|2933782_2934691_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_000590392.1\|2934687_2935950_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
WP_001278994.1\|2935946_2936585_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_001136918.1\|2936589_2937366_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_000104456.1\|2937454_2938819_+	GntP family transporter	NA	NA	NA	NA
WP_048943255.1\|2938912_2939905_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	4.6e-32	37.6
WP_001272592.1\|2939967_2941107_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000254708.1\|2941246_2941873_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001295182.1\|2941866_2942628_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0

DBSCAN-SWA_9

4857447 : 4908422

Enterobacteria_phage(50.94%)

portal,terminase,capsid,integrase,head,lysis,tail

attL 4856256:4856270|attR 4869220:4869234

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4856256:4856270	attL	NA	NA	NA	NA
WP_001218277.1\|4857447_4858671_+\|integrase	site-specific integrase	A5LH57	Enterobacteria_phage	4.0e-235	98.5
WP_048943335.1\|4858853_4862681_+	hypothetical protein	NA	NA	NA	NA
WP_000206803.1\|4863077_4863698_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	2.2e-112	91.3
WP_001242723.1\|4863697_4864060_-	phage protein	U5P092	Shigella_phage	4.4e-65	95.8
WP_000008209.1\|4864050_4864587_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	1.6e-100	98.9
WP_048943336.1\|4864714_4865539_-	DUF2303 family protein	U5P439	Shigella_phage	8.6e-149	99.3
WP_000135680.1\|4865604_4865967_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_001020632.1\|4866669_4867362_-	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	6.4e-121	96.5
WP_001191669.1\|4867459_4867720_+	helix-turn-helix transcriptional regulator	K7PJQ8	Enterobacteria_phage	5.4e-41	100.0
WP_000526668.1\|4867712_4868270_+	protein YmfL	S5FXP0	Shigella_phage	1.7e-95	94.6
WP_001250269.1\|4868445_4868625_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000104941.1\|4868614_4869556_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	6.4e-140	93.0
4869220:4869234	attR	NA	NA	NA	NA
WP_074400546.1\|4869552_4870047_+	PerC family transcriptional regulator	U5P0U0	Shigella_phage	1.7e-83	93.9
WP_001442792.1\|4870046_4870700_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	4.7e-126	98.6
WP_000210170.1\|4870696_4871023_+	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_000767103.1\|4871019_4871409_+	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	1.0e-67	98.4
WP_048943343.1\|4871428_4872226_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	4.9e-149	99.2
WP_001433852.1\|4872233_4873223_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.9e-195	99.7
WP_001047110.1\|4873236_4873989_+	antitermination protein	K7PGU5	Enterobacteria_phage	5.3e-137	99.2
WP_000917724.1\|4874242_4874446_+	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000799656.1\|4874596_4875649_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.7e-208	100.0
WP_000839596.1\|4875716_4875932_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001468348.1\|4875936_4876281_+	YdfR family protein	K7PGU6	Enterobacteria_phage	4.4e-38	96.4
WP_000370550.1\|4876246_4876519_-	hypothetical protein	NA	NA	NA	NA
WP_048943344.1\|4876624_4877158_+	lysozyme	K7PLY1	Enterobacteria_phage	5.3e-99	94.9
WP_001228702.1\|4877374_4877581_+	hypothetical protein	H6WRZ6	Salmonella_phage	5.3e-31	98.5
WP_001139678.1\|4877609_4877762_+	hypothetical protein	K7PKL2	Enterobacteria_phage	3.1e-20	96.0
WP_000079508.1\|4878113_4878524_-	DUF1398 family protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
WP_001663509.1\|4878580_4878814_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	96.3
WP_000453611.1\|4879202_4879748_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	2.3e-94	98.3
WP_001027268.1\|4879722_4881648_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.7
WP_000198149.1\|4881644_4881851_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_032358757.1\|4881847_4883449_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.1e-309	99.2
WP_048943348.1\|4883429_4884749_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.8e-231	97.9
WP_001338090.1\|4884758_4885091_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.5e-55	99.1
WP_048943349.1\|4885146_4886172_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	9.0e-188	97.4
WP_048943350.1\|4886213_4886609_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.4e-56	93.2
WP_000752996.1\|4886620_4886974_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	1.5e-62	99.1
WP_048943351.1\|4886985_4887564_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	97.9
WP_000683111.1\|4887560_4887956_+\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	5.0e-70	99.2
WP_048943399.1\|4887963_4888704_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.1e-130	98.0
WP_001357868.1\|4888719_4889142_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	8.2e-71	96.4
WP_000459457.1\|4889123_4889558_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_048943353.1\|4889550_4892112_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.3
WP_000847345.1\|4892108_4892438_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
WP_001152502.1\|4892437_4893136_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.9e-131	97.8
WP_048943354.1\|4893141_4893885_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.8e-145	95.5
WP_000090892.1\|4893821_4894454_+\|tail	tail assembly protein	C6ZCZ4	Enterobacteria_phage	2.7e-94	98.1
WP_048943357.1\|4894513_4897996_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.7
WP_032202908.1\|4898062_4898662_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	2.2e-109	98.5
WP_071886295.1\|4898726_4902077_+	short-chain fatty acid transporter	X2KTY7	Enterobacteria_phage	7.3e-13	39.1
WP_048943362.1\|4902076_4902661_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.3e-103	94.8
WP_005025120.1\|4903105_4904710_-	TIR domain-containing protein	NA	NA	NA	NA
WP_048943363.1\|4905069_4905330_-	DinI-like family protein	A5LH55	Enterobacteria_phage	3.1e-36	95.1
WP_000202566.1\|4905549_4907136_+	peptide chain release factor 3	D0R0F5	Streptococcus_phage	5.3e-30	24.9
WP_001295748.1\|4907528_4908134_+	molecular chaperone OsmY	NA	NA	NA	NA
WP_000490275.1\|4908260_4908422_+	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	1.8e-10	64.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007442

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection