CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009928	Chryseobacterium gallinarum strain DSM 27622 chromosome, complete genome	1 crisprs	DEDDh,csa3,WYL,cas3,PD-DExK,cas2,cas1,cas9	0	17	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009928_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009928_1

4372615-4374510

TypeII

Consensus_repeat	Method
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	CRISPRCasFinder
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	PILER-CR

24 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP009928_1

>merge|NZ_CP009928|1|4372615-4374510|CRISPRCasFinder,PILER-CR
GTTGTGAAGTGCTCTCAAAATTTATTATCTTCGTGATTAGTCACAGCCAGAATAAGACGAAGGATCTGCAATACCTTGTTGTGAAGTGCTTTCAAAATTCATTATCTTCGTGATTAGTCACAGCGTAAAAATTGATTTCCGGTATATGCAACCTGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCTTCATCCTGTACCAACTTCGCGTGGCGCTCGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCAATTCCGCCCAATTTGTCAATTCATCGTCAGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCTTGATGCAGTTTGTGGACCCGAAGCATGTTGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCTGTTACTTTGATTTGACTTTGTAAATGTAAGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCATCCCGGAAGATTATAGATTGCAGCGTCCAGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCAGGCATATATAGAATTCGAGTAATCTAATGGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCGGAACGGGTGAACCACTCCATATTTTCGTGGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCTTTCTAACTCGTCAATACATTGTTCTGCGTGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCTTTCTAACTCGTCAATACATTGTTCTGCGTGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCGAGTTTCTTGTTGTGCTGCTATTTCTTCCTGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCTGAAACGGCATTCATAAGATACGAGGTTGAGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCGATCGATTTCTGAAGGATGAACCTATTGAAGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCGTATTCCTCATATTTCTGAGTCTCTGGCCAGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCATATATAGATAAATCATATTCATCATCACTGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCCCTCTCCTTGTGTGAGACGCTCAAATCACAGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCTCCATAGTCTCCAGAATCAATTGTTTCCTTGGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCCATTGGCACTTGATATAATTTCTTGATAATGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCTAAGTGAATCAATGGTTATACCACTATCATGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCGCTCCCTGGGTTAATAATGCATATTAGATCGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCTTTTCCAGACTTTCAAACAATCCATTTACTGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCGAATATCCTGATCAAACCTTTGATCTTGGCGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGCATGGAGTATTAATCCCATTTTTATTTAAAAGTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC

>NZ_CP009928|1|1|4372615-4374510|CRISPRCasFinder
GTTGTGAAGTGCTCTCAAAATTTATTATCTTCGTGATTAGTCACAGC	CAGAATAAGACGAAGGATCTGCAATACCTT
GTTGTGAAGTGCTTTCAAAATTCATTATCTTCGTGATTAGTCACAGC	GTAAAAATTGATTTCCGGTATATGCAACCT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TTCATCCTGTACCAACTTCGCGTGGCGCTC
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	AATTCCGCCCAATTTGTCAATTCATCGTCA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TTGATGCAGTTTGTGGACCCGAAGCATGTT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TGTTACTTTGATTTGACTTTGTAAATGTAA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	ATCCCGGAAGATTATAGATTGCAGCGTCCA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	AGGCATATATAGAATTCGAGTAATCTAATG
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	GGAACGGGTGAACCACTCCATATTTTCGTG
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TTTCTAACTCGTCAATACATTGTTCTGCGT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TTTCTAACTCGTCAATACATTGTTCTGCGT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	GAGTTTCTTGTTGTGCTGCTATTTCTTCCT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TGAAACGGCATTCATAAGATACGAGGTTGA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	GATCGATTTCTGAAGGATGAACCTATTGAA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	GTATTCCTCATATTTCTGAGTCTCTGGCCA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	ATATATAGATAAATCATATTCATCATCACT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	CCTCTCCTTGTGTGAGACGCTCAAATCACA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TCCATAGTCTCCAGAATCAATTGTTTCCTTG
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	CATTGGCACTTGATATAATTTCTTGATAAT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TAAGTGAATCAATGGTTATACCACTATCAT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	GCTCCCTGGGTTAATAATGCATATTAGATC
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TTTTCCAGACTTTCAAACAATCCATTTACT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	GAATATCCTGATCAAACCTTTGATCTTGGC
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	ATGGAGTATTAATCCCATTTTTATTTAAAA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC

>NZ_CP009928|1|1|4373693-4374510|PILER-CR
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	GTATTCCTCATATTTCTGAGTCTCTGGCCA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	ATATATAGATAAATCATATTCATCATCACT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	CCTCTCCTTGTGTGAGACGCTCAAATCACA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TCCATAGTCTCCAGAATCAATTGTTTCCTTG
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	CATTGGCACTTGATATAATTTCTTGATAAT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TAAGTGAATCAATGGTTATACCACTATCAT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	GCTCCCTGGGTTAATAATGCATATTAGATC
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	TTTTCCAGACTTTCAAACAATCCATTTACT
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	GAATATCCTGATCAAACCTTTGATCTTGGC
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC	ATGGAGTATTAATCCCATTTTTATTTAAAA
GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009928.1\|WP_050021381.1\|4368947_4369304_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009928.1\|WP_053329101.1\|4368565_4368817_-\|DUF1294-domain-containing-protein	unknown	unknown	gnl\|CDD\|377743
NZ_CP009928.1\|WP_053329103.1\|4380232_4382356_+\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP009928.1\|WP_053329099.1\|4364040_4365657_-\|family-10-glycosylhydrolase	unknown	unknown	gnl\|CDD\|224563
NZ_CP009928.1\|WP_050022726.1\|4374902_4375796_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP009928.1\|WP_053329098.1\|4363267_4363819_-\|ferritin	unknown	unknown	gnl\|CDD\|153113
NZ_CP009928.1\|WP_050020738.1\|4361997_4363089_-\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP009928.1\|WP_050020437.1\|4387881_4389366_+\|peptidase	unknown	unknown	gnl\|CDD\|226483
NZ_CP009928.1\|WP_053329105.1\|4383683_4384319_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223620
NZ_CP009928.1\|WP_027381692.1\|4387465_4387642_-\|histone-H1	unknown	unknown	unknown
NZ_CP009928.1\|WP_053329104.1\|4382358_4383615_+\|PD-(D/E)XK-nuclease-family-protein	unknown	unknown	gnl\|CDD\|379536
NZ_CP009928.1\|WP_167336375.1\|4361693_4361855_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009928.1\|WP_053329102.1\|4370500_4372495_+\|gliding-motility-associated-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|372639
NZ_CP009928.1\|WP_050022725.1\|4374567_4374906_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP009928.1\|WP_053329437.1\|4375805_4380014_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375967
NZ_CP009928.1\|WP_053329436.1\|4369408_4370083_-\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP009928.1\|WP_050020440.1\|4384415_4385987_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349937
NZ_CP009928.1\|WP_050020735.1\|4367902_4368451_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153228
NZ_CP009928.1\|WP_053329100.1\|4365783_4367589_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|273597
NZ_CP009928.1\|WP_053329106.1\|4386145_4387291_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009928.1\|WP_053329101.1\|4368565_4368817_-\|DUF1294-domain-containing-protein	gnl\|CDD\|377743	pfam06961, DUF1294, Protein of unknown function (DUF1294). This family includes a number of hypothetical bacterial and archaeal proteins of unknown function.	4.86412e-18
NZ_CP009928.1\|WP_053329103.1\|4380232_4382356_+\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP009928.1\|WP_053329099.1\|4364040_4365657_-\|family-10-glycosylhydrolase	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.75798e-61
NZ_CP009928.1\|WP_053329098.1\|4363267_4363819_-\|ferritin	gnl\|CDD\|153113	cd01055, Nonheme_Ferritin, nonheme-containing ferritins. Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.	2.46194e-69
NZ_CP009928.1\|WP_053329437.1\|4375805_4380014_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	5.0943e-54
NZ_CP009928.1\|WP_050020738.1\|4361997_4363089_-\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP009928.1\|WP_050020437.1\|4387881_4389366_+\|peptidase	gnl\|CDD\|226483	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only].	3.27432e-30
NZ_CP009928.1\|WP_053329105.1\|4383683_4384319_+\|HAD-family-hydrolase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	6.85893e-35
NZ_CP009928.1\|WP_053329104.1\|4382358_4383615_+\|PD-(D/E)XK-nuclease-family-protein	gnl\|CDD\|379536	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	4.71311e-41
NZ_CP009928.1\|WP_053329102.1\|4370500_4372495_+\|gliding-motility-associated-C-terminal-domain-containing-protein	gnl\|CDD\|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	1.11942e-16
NZ_CP009928.1\|WP_050022725.1\|4374567_4374906_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.10278e-20
NZ_CP009928.1\|WP_053329436.1\|4369408_4370083_-\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	5.79435e-29
NZ_CP009928.1\|WP_050020440.1\|4384415_4385987_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349937	cd08015, M28_like, M28 Zn-peptidase-like; uncharacterized subfamily. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions.	6.66069e-86
NZ_CP009928.1\|WP_050020735.1\|4367902_4368451_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	3.16978e-84
NZ_CP009928.1\|WP_053329100.1\|4365783_4367589_-\|translational-GTPase-TypA	gnl\|CDD\|273597	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA. This bacterial (and Arabidopsis) protein, termed TypA or BipA, a GTP-binding protein, is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown. [Regulatory functions, Other, Cellular processes, Adaptations to atypical conditions, Protein synthesis, Translation factors].	0
NZ_CP009928.1\|WP_050022726.1\|4374902_4375796_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.78984e-97

>NZ_CP009928.1|WP_053329102.1|4370500_4372495_+|gliding-motility-associated-C-terminal-domain-containing-protein
MKKTLLSGKKAGSILVFLFLIFSVLQLNAQAPPTCAGTWGPPIVNQTFGQGNVTDKWYGPLSTYAPGATTSTIFVGTAGPPGGGALADGYSGLVKTPSTGGNGFLNSADHTGNPNGLMMLINAPSTAATIFFEYTMSNLCPNTTLKLAVWILNVNPPGTCGTGYQYPNVTLRAIDPATGNTLGTSATGNIPTNQTWTQYSIIFNNASSTSVKLQFINNSVGNGCGNDLAIDDITVQPCVPATMQALPGSSTTLCPNKNATVDFTATLTGSSYNPVEYQWQYSSDGGTTWIDQGTPTHNPNYTFNSAGLPAGNYLIRFKAGPQGSVLNSQCNAISQPTTVTVSSLPKVNDTTVKSCYIENNPSTASFNLTTANVTSETGVTKRYFPSLADATNGTNEITANPASYIASNSTIYIRVTNSNGCFSIAKVTLEVIPPKTSSVLIDKTICIEDKTSLDAGPGFNAYLWSTGATTQQITNVGVGTYWVNLKSGECTTKQTVKVHASPNPVIKSIDIINNTATINATGGTPPYQYAADQTGKWQDVNIFTNLTRGQHIFYVKDQYNCVPVAAEITVPNLINAITPNEDGKNDNIDYSALAYKRNLIFEVYDRYGNKLYEAGKIRNFKWDGTAFGKKLPTATYWYTISWNENNNANTSVRYNGWVLVKNRE
>NZ_CP009928.1|WP_053329436.1|4369408_4370083_-|YceI-family-protein
MKKLSVIALVGVGLLAASCNSKEKSDTAVATEQAVAESKGEVLAVDTTASVVNWKAFHKGGFAPRWGTLNIKTGDLSIEGGQVTAGNFTIDMTSIKVDPASVTEKDKKPADLEAHLKNPDFFDVEKNPVSDFKITSVADLKEAPKDAVAGANKTVSGNLTLSGKTMNVSFPAKVDVADNTAAIQAKFTVNRADWGIKFGTSEADPAEWMISKDIEIAIDVKAKK
>NZ_CP009928.1|WP_050021381.1|4368947_4369304_+|hypothetical-protein
MTIHDLAGTFSIEGSNQEDTSEATYRGILTLSVDENNRIIARWIIGNHIQNGTGFYKDHILVINFNYEGDDSKIYKGVAVYRCLSKDILDGFWSEKHGNPLYLGSEYGVRIQDSWELN
>NZ_CP009928.1|WP_053329101.1|4368565_4368817_-|DUF1294-domain-containing-protein
MIPFLLIANFITFGVFGFDKWQARKHQWRVSENALLGLSFIGLLGAASGMIIFNHKVSKKSFLVKFVLVAVIDVVLLYRLIRH
>NZ_CP009928.1|WP_050020735.1|4367902_4368451_-|type-1-glutamine-amidotransferase
MSKKIAILATNGFEESELQSPKEYLEQQGWTAHIVSPTSGTIKSWAEKDWGKEYNVDKTLDEASASDYDALVLPGGVINPDQLRTNDQALSFVKDFFIQNKPVAAICHGPQVLINAEVVNGRNMTSVKSISKDLINAGAHWEDKEVVVDNGLVTSRTPKDLPAFNAKMVEEFKEGKHAEQGV
>NZ_CP009928.1|WP_053329100.1|4365783_4367589_-|translational-GTPase-TypA
MQNIRNIAIIAHVDHGKTTLVDKIIHATNIFRENQESGELIMDNNDLERERGITILSKNISVTYKDTKINVIDTPGHADFGGEVERVLKMADGVILLVDAFEGPMPQTRFVLQKALELGLRPLVVINKVDKPNCRPNEVHDQVFDLFFNLEATEEQLDFPTFYGSSKQGWFNTSLEQTEDILPLLDGILQYVPAPTVTEGNLQMQITSLDYSSFLGRIAIGKVTRGELKESQWIGLAQADGKIIKGKVKELYVFEGLGKKKVTEVQAGDICAVVGFDAFQIGDSFVDLENPEPLERTAIDEPTLNMTFSINNSPFFGKDGKYVTSNHLKERLTKELEKNLALRVQQTDDANTFLVFGRGILHLSVLIETMRREGYEMTIGQPQVILREIDGVSCEPYESLVVDVPEEYASRVIDLATQRKGDLHIMETKGEMQHMEFEIPSRGLIGLRSQMLTATAGEAIMAHRFTEYKPFKGAIPGRNNGVLISKTTGPATEYSINKLQDRGKFFVDPGEEIYTGMIVGEQNKPGDLVVNIVEAKQLNNMRAAGKDKDTGVAPKILFSLEECMEYIQADEAIEVTPNFIRMRKKILSEEERKRVERSAKA
>NZ_CP009928.1|WP_053329099.1|4364040_4365657_-|family-10-glycosylhydrolase
MKMNTLKLIVLLGVGASYSVSCSTQSAVSKTPPANKTTKPINNTTQPKPPVTATKPAPGVPPAADEVFRTDLPEIKREFRGAWIASVANINWPSRNDLTVDQQKAEAINMLEMLKNNNFNAAIFQIRPSADALYTSNIEPWSYFLTGETGTAPYPNYDPLQFWIEEAHKRGLELHVWLNPYRAHHTNGGSVNNLSMVNKLSDIVVRLKNGMYWFDPANPKTQGHVSNVVKDIVKRYDIDAIHFDDYFYPYATYNKGADFPDNATWNAYVNSGGTLSRADWRRDNVNRFVERIYKEIHAEKSHVKFGISPFGIWKPGYPAGIVGSSQYDELYADAKLWLNKGWVDYFSPQLYWPIDSKGQSFEALLSWWQSENTMNRHLWPGLNTVEIKVSDRPTEIKNQIEISRNVLKKDAGEIHWSIAGLTRNPNMLPVLKNSVYSEKALIPKTPWIKAVPLQTPTLFIADNGSFAQTNWSSGNMSNVFQWVLFKQYNGVWETEILTLDTLSKDIPKFKDGKKLNAVAIKAIDRLGNESDYMARKIK
>NZ_CP009928.1|WP_053329098.1|4363267_4363819_-|ferritin
MNTKRLSENMEKALSDQMNKEIHASHVFLSYGIWADDKGYQGIANFLYRHAQEERNHSIKFMEYILNRGGKPKVEAIPAPPADPENLTACFDGVFKHEVDNTTAIYRIVDLSMEEKDWATWNFMQWFVQEQIEEETLAQNLIDKLKIAGGDRATDESLFTLDKTLQDAPNDVPLAQEATGDNP
>NZ_CP009928.1|WP_050020738.1|4361997_4363089_-|redox-regulated-ATPase-YchF
MKCGIVGLPNVGKSTLFNCLSNAKAQSANYPFCTIEPNLGTVSVPDQRLFELEKIVKPERVLPAVVEIVDIAGLVKGASKGEGLGNQFLANIRECEAIIHVLRCFDNGNIVHVEGSVDPLRDKEIIDIELQLKDLETVGKAVEKAKKFIKSGKKEDILTYETLQNLQKFLEDGKNAREFAVDDLTKSIIGEVQLLTNKPVLYVCNVDENSIKNGNEWVGKIEEMAKNEGAEVVVLAAQIEADINELETYEEREIFLDELGLTEPGVNRLIRKAYDLLKLQTYFTAGVKEVRAWTIGQGWTAPQAAGVIHTDFEKGFIRAEVIKYNDYIQYGSEVKVKEAGKLSVEGKEYIVQDGDIMHFRFNV
>NZ_CP009928.1|WP_167336375.1|4361693_4361855_+|hypothetical-protein
MENKNVNHGKKLNKKQLRVITGGKEMCWLPTLECSKISLSCAEPQCQPIIDVE
>NZ_CP009928.1|WP_050022725.1|4374567_4374906_-|CRISPR-associated-endonuclease-Cas2
MNAERFNAYRIMWVLVLYDLPTETKANMRDANLFRKRLLDDGFTLFQFSMYVRHCPSRENAEVHIKRVKNMLPKAGKVAIMCITDKQFADIEIFFARNKEEPPPTFQQLELF
>NZ_CP009928.1|WP_050022726.1|4374902_4375796_-|type-II-CRISPR-associated-endonuclease-Cas1
MITRSIYIGNPAYLKLKDEQMYILDPSTKDLKGKIPVEDLGLLMLDHFQITISHQLIQKMMGNNVVVISCDAHHLPHGIMLPIYGHTEHSDRVKDQLEASEPLKKQLWKQTVECKIENQKEVLRRLGNYYEPMTEYHRNVKSGDSTNMEGIAAQHYWKYLISLDFLRARFGDSPNQFFNFGYSVLRSIVARAIVETGLLPVLGIFHKNKYNAYCLADDLMEPFRPFVDLLVMQWLERKPETEELDKEFKAHILKIATVDVGIDGKTRPLLIAVKMTASSLYKCYTGEKRLISYPELL
>NZ_CP009928.1|WP_053329437.1|4375805_4380014_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MERILGLDLGVSSIGWALVEEDVKNPENNKIIKLGVRVNPLTIDEKTNFEKGKSITTNAGRTSARSARRNLQRFKLRRKKLLEILIHYKIIKNDAVLAETGKNTTFQTQYLRAKAAREKIELDELARVLLLINKKRGYKSSRKVQNDDDGKAIDGLSVAKELYEKNYTPGQYAYDLLKRGKKQIPDFYRSDLQNELDRIWEFQKQYHPDILTDEFKKELEGKGQRATAAIFLNRYKIYTADNKGTREEKKIQAYQWRVEALSQPLDVKEVAYVIAEINNNLNNSSGYLGAISDRSKKLYFNGQTIGEYLFEELSANPHTRLKNQVFYRQDYQDEFEKIWKIQTKFHPELTKELKEQVRDIVIFYQRKLKSQKGLISFCEFESREIEIEENGKRKRKKVGLKVAPKSSPLFQEFKIWQVLNNIEIKNEDERRYLEPEEKELLFNELNCKGNLTSQKCLELLGFKSKDAKLNFKVVEGNRTNEKLYDAFLKILELQGYNVFELLKIKEDKDEAKLSELKASADEIKGMIKEIFNANLINTSILDFNAELEGKDFENQASYQFWHLMYSYEGDNSPSGNEKLYELLEKKFGFKKEHSKILSTIVFSQEYGSLSTKAMRRIYPYIKDNKYSEACLLAGYNHSKHSLTKEELENRKLKEQLEVLPKNSLRNPVVEKILNQMINLVNATISEYGKLDGVRIELARELKKSAQEREDMAKSINEATLLHQKYATILKQEFGVVNPSRNDIIRYKLYMELTVNGYKDLYTNTKIEKENLFTDKYDIDHIIPQSRFFDDSFSNKVLVPRQSNLDKGNLTAYDFMSNKGSEREEHFLNVIKELLDKGSISKAKYEKLKKKGLEIGDGFIERDLRDTQYIAKKAKEILFEITNSVVTTSGRITDKLRKDWDLVNIMKELNLDNYRRLGLTEIVRNSKGEEKELIPDWTKRNDHRHHAMDALTVAFTTRNHIQYLNYLNARKDEKHKEHQNIYAIENIITEVIEKKNGSKTRRFKAPMNSFRHEAKQHLKEILVSHKTKNKVVTSNINKTKKKGGIHKKTELTPRGQLHKETVYGSKKFLQSREEKVSAKFDYETILMVVNPIHRNALLNRLKEYGNDPKKAFSGKNAINKNPVYLDDSKTDILSEKVTLSWYETGYTIRKSVTPDNFKDYKNLEKITDLGIKKILKERLDQFKGNAKEAFSNLDKDPIWLNEEKGIAIKTVTITGVSNAESLHFKKDHLGKEILDENGNKIPGDFVSTGNNHHLAIYLDEEEKLDDKMVTFYEAVLRVNQGLPVIDKDYNKEKGYKFLMTLKQNEMFVFPNEDFDPNEIDLLDERNLERISKHLFRVQKISKVGYGNSFVRDFVFRHHLETTVEERKELRNITYIQLKSLEGLRNIIKVRLNHLGKIVQIGEY
>NZ_CP009928.1|WP_053329103.1|4380232_4382356_+|RNA-binding-transcriptional-accessory-protein
MTTVAFIQKQLDISEKSISNTLQLLAEDCTIPFISRYRKDKTGNLDETQIEQISKISKQFEEIVKRKESILKSIEEQGGLTPELQQRIEDSFDIQELEDLYLPFKKRKKTKADAAKEKGLEPLAKIIMSQKNNDLQFLASKYLNNDVPSEEDALQGARDIMAEWINENMYVRKNLRRLFQRKAVISSKVVKAKKDEEDAQKFSQYFEWEENLNRTPSHRLLAMLRAEAEGFVKTNVAIDKEEAIDFIEKAIIKSDNESSAQIALAIKDSYKRLLEPAISNEALQEAKEKADKKAIEIFSENLSQLLLAPPLGEKRILAIDPGYRSGCKVVCLDEKGDLLHNETLYPHAPQNESGMAMKKIRSMVNAYNIEAISIGNGTASRETEFFIKKIAFDRPIQVFVVSEAGASVYSASKIAREEFPTYDVTVRGAVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQTQLKNELDSTVMKCVNSVGINLNTASKSLLSYVSGIGEKMAENIVNYRTENGAFEDRKQLKKVPRLGEKAFQQAAAFVRIANAKNPLDNSAVHPEAYGIVEKMAKDLGITTNELIANKEKIALIKPENYITGDIGILGIKDILKELEKPGLDPRKAARIFEFDPNVKSIKDLKAGMILPGIVNNITAFGCFVDLGIKESGLVHISQLKDGYVSDVNEVVKLHQHVKVKVTEVDEARKRVQLSMIL
>NZ_CP009928.1|WP_053329104.1|4382358_4383615_+|PD-(D/E)XK-nuclease-family-protein
MSNIQLSQIKGLLEKVSVISKKYHDIAQIRGENFNIFSIMSMETNERYTHSAMIGELLNPRGSHGQGSVFLKLFFKEIECLKPIHQFNFENAKVTIEKYLGSIDPERKTGGYIDIIIEDGNNTIIIENKIYAVDQVSQLERYKNHYKQAVLLYLNLYGNEPSGKSKGQLEVNKDFYLITYKSHIKNWLEECHQQVVNQPVLRETIKQYLYLVKKLTNQTINNDMSDEIKSLLLSDLKSAKEISDNFHSAKAIILNKIRDGLKKELEKIYEDRYYFFENHNRAEEKNSHIWFSLKDYREDDKQIICFGMESFSGYSNNQNDLFIGILDFYNSYQILFKEYFPDMKISGWWRGIESIGNFESYNIDFSDIDFLQFLHDNPFKLPELIRVITDKTMEYINRHEKTLITILSSSRKIKETQF
>NZ_CP009928.1|WP_053329105.1|4383683_4384319_+|HAD-family-hydrolase
MNYKNLIFDLDGTLWDSRATIIKIWNNVLAKHNLLREEMRPEDLNQYMGLLTEDIIRDIVPGISDQQTERILTEVSGYENIALRQHGGVLYPGVGETLQLLAGTHNLFIVSNCQDGYIEAFLDYYKFNPLFKDFESHGRTGKPKSENIRLIMERNDMNPENSVYIGDTQTDYTSALYNNLPFIFCSYGFGQLNTADYQPFISQFSEIKLHV
>NZ_CP009928.1|WP_050020440.1|4384415_4385987_-|M20/M25/M40-family-metallo-hydrolase
MRLNRFFAVPAIMLAAQFSWAQVKVDPNERLDPIVKSFVDEVNNNSQLEKMAYELLDGIGPRLVGTPEMLAANEWSAAKLRSWGVDAHLQQFGTWKGWQRGTTHVDMVYPRVKSLAATQLAWSPSTKKAVEAEVIILPKVSTKAEFDKWLPSVKGKIVLMAQYQKIGRSDEQIKEFATPELYEKLKAEKEQAAKDFSSYIKNIGYDNNTLPEALEKSGAAGIAISNWTGIMGANRIFGAKTTKIPMIDIDVEDYGMLYRMAENGAQPKIKIDAQSKVLPEAKSFNTIGMIKGKEKPEEYVILSAHLDSWDGAQGATDNGTGTITMLEAMRILKKYYPNNKRTIVIGLWGSEEQGLNGSRGFVADNPQIIKGVQAAFNQDNGTGRVVNISGQGFVKAYDYIGRWLDGVPKAVRSHIKTDFPGMPGGGGSDHASFVAAGVPGISLGSLNWGYFGYTWHTTKDTYDKIVFDEVKNNVVLTAALAYMASEDPEFANREKRVMPQDDKGETIKWPEAKEPRRSSKDYK
>NZ_CP009928.1|WP_053329106.1|4386145_4387291_-|hypothetical-protein
MKFFYFLFIFFFYAVSAQKIRIVDAENGNPVSNARIILRDQIIYSNEDGFAPLGQDAGDFEVSASGFQTEKVPVFIAEIKLKPIYKNIDEIKIINVDIRKIFDDVSKNYDKRYYSGPSLYDIVYKEKNLDNDKLFFLVIAEAKLWSKSNRYNFKDGIRKNYDDILQMQLNNVKYFKNDKSGTVLSGRTDEFSHEQLGNFFLNYELYRMQQHLKMKECKYSGRLLFEEGDEQVIAFKIQSGNGAQMEGEFKYNKADKVITYFENHYFQSDYPTMKKTGTDGREFMYKLGDGILIFDFYKKDGVYVPALTRLEGDKFTIFYKDETHVRKFSREIIYNTFNKTDKGLDPKVNFKVSIWENVPVKEEKTETILLSAEEQAFVNQK
>NZ_CP009928.1|WP_027381692.1|4387465_4387642_-|histone-H1
MKELIEKINAEFEAFTTEANQQAEKGNKAAGTRARKAALELSKLFKDFRKVSVEESKK
>NZ_CP009928.1|WP_050020437.1|4387881_4389366_+|peptidase
MFKKLIFLIFILPLIAYSQNKISYKVYYDEDLSKNGLKVRVDYTLKKASDTLSFYYANENWGENELFKNLVLLKEDNPDIIFESKPKDNKIKIRQKKGTHFSLVYHIKQDFTDPSYKIFNRPRINNTFFHVLGKNLFMVPVSFTEMPDEQEFQFVIEWIAFPKKFTLHNNFASQVQQQKIKTALWSGFYNSLFIGGDYRFYSFTIHDKPVYFALRDEWSNGFTDDFLFSNLKKAIHSQRDFWKDYDQDYFTVIMTPTVSQKDSLYKGYSTTGSAIKNAFIIQGTNNPFNDKDSYLYLFHHELMHEWIGNTIQNKHEELNYWFSEGFTDYYTYKNRLRIKDLSMDEWQKLFNHEILKAHWKNPERNIPNYKIKDDFWKSRNVEKIPYRRGAIFALWLDNQIILKTRYKKSLDDLMRDLLKTCKEKKIKFTDELFIEFVQKYLDQDISYFFQKHILNGEDIDLPKEKWIEGFAFRVTDGVPQLEIDHSKNEKYLIE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	NC_019737	Crinalium epipsammum PCC 9333 plasmid pCRI9333.07, complete sequence	4331-4360	5	0.833
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	NZ_CP024328	Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-9	7620-7649	5	0.833
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	NZ_CP024402	Borrelia miyamotoi strain Izh-4 plasmid pIzh4-9	6611-6640	5	0.833
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	NZ_CP024320	Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence	4560-4589	5	0.833
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	NZ_CP024210	Borrelia miyamotoi strain Izh-5 plasmid pIzh5-3	6477-6506	5	0.833
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	NZ_CP024337	Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-2	6486-6515	5	0.833
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	NZ_CP024401	Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp64, complete sequence	6559-6588	5	0.833
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	NZ_CP024356	Borrelia miyamotoi strain Izh-16 plasmid pIzh16-2	6481-6510	5	0.833
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	NZ_CP024375	Borrelia miyamotoi strain Izh-14 plasmid pIzh14-2	6469-6498	5	0.833
NZ_CP009928_1	1.13\|4373586\|30\|NZ_CP009928\|CRISPRCasFinder	4373586-4373615	30	NC_027352	Bacillus phage JBP901, complete genome	63588-63617	5	0.833
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	MN693046	Marine virus AFVG_25M413, complete genome	3154-3183	6	0.8
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	MN693008	Marine virus AFVG_117M9, complete genome	3149-3178	6	0.8
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	AP013883	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1-MedDCM-OCT-S41-C120, * SEQUENCING IN PROGRESS *	2885-2914	6	0.8
NZ_CP009928_1	1.14\|4373663\|30\|NZ_CP009928\|CRISPRCasFinder	4373663-4373692	30	MT028491	Ochrobactrum phage vB_OspM_OC, complete genome	213474-213503	6	0.8
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	KM272358	Salmonella phage LSPA1, complete genome	6916-6945	6	0.8
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KY554775	Lactococcus phage AM11, complete genome	93357-93386	6	0.8
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KY554773	Lactococcus phage AM8, complete genome	93372-93401	6	0.8
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KY554768	Lactococcus phage AM1, complete genome	92853-92882	6	0.8
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KY554769	Lactococcus phage AM2, complete genome	92850-92879	6	0.8
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KY554772	Lactococcus phage AM5, complete genome	96581-96610	6	0.8
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KY554770	Lactococcus phage AM3, complete genome	93227-93256	6	0.8
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	NC_049856	Lactococcus phage AM4, complete genome	78626-78655	6	0.8
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KY554776	Lactococcus phage AM12, complete genome	92607-92636	6	0.8
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KY554774	Lactococcus phage AM9, complete genome	92624-92653	6	0.8
NZ_CP009928_1	1.22\|4374280\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374280-4374309	30	MK415400	Phage apr34_1784, complete genome	17006-17035	6	0.8
NZ_CP009928_1	1.6\|4373047\|30\|NZ_CP009928\|CRISPRCasFinder	4373047-4373076	30	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	136731-136760	7	0.767
NZ_CP009928_1	1.14\|4373663\|30\|NZ_CP009928\|CRISPRCasFinder	4373663-4373692	30	NZ_CP025123	Planococcus sp. MB-3u-03 plasmid unnamed12	99816-99845	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MK756091	Flavobacterium phage FCOV-F45, complete genome	35173-35202	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MK756087	Flavobacterium phage FCOV-F16, complete genome	35178-35207	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	KM873719	Flavobacterium phage FCL-2, complete genome	35083-35112	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MT585282	Flavobacterium phage FCOV-F15, complete genome	35169-35198	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MK756086	Flavobacterium phage FCOV-F13, complete genome	35169-35198	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MK756093	Flavobacterium phage FCOV-F54, complete genome	35163-35192	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MK756092	Flavobacterium phage FCOV-F46, complete genome	35178-35207	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MK756096	Flavobacterium phage V186, complete genome	32997-33026	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MT585310	Flavobacterium phage FCOV-F56, complete genome	32984-33013	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MT585281	Flavobacterium phage FCOV-F14, complete genome	35168-35197	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MK756094	Flavobacterium phage FCOV-S1, complete genome	32996-33025	7	0.767
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	MK756095	Flavobacterium phage FCOV-S2, complete genome	32899-32928	7	0.767
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	NC_048074	Acinetobacter phage vB_AbaM_B09_Aci01-1, complete genome	2601-2630	7	0.767
NZ_CP009928_1	1.22\|4374280\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374280-4374309	30	NZ_CP040048	Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence	338226-338255	7	0.767
NZ_CP009928_1	1.24\|4374434\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374434-4374463	30	NC_018486	Bacillus thuringiensis HD-771 plasmid p01, complete sequence	62537-62566	7	0.767
NZ_CP009928_1	1.24\|4374434\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374434-4374463	30	NZ_CP028980	Lactobacillus plantarum strain LQ80 plasmid pLQ803, complete sequence	29329-29358	7	0.767
NZ_CP009928_1	1.24\|4374434\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374434-4374463	30	NZ_CP037433	Lactobacillus plantarum strain EM plasmid pEM4, complete sequence	47974-48003	7	0.767
NZ_CP009928_1	1.24\|4374434\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374434-4374463	30	NZ_CP028239	Lactobacillus plantarum strain SRCM101511 plasmid unnamed4, complete sequence	18364-18393	7	0.767
NZ_CP009928_1	1.24\|4374434\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374434-4374463	30	NZ_CP039728	Bacillus sp. S3 plasmid unnamed, complete sequence	156470-156499	7	0.767
NZ_CP009928_1	1.24\|4374434\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374434-4374463	30	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	618676-618705	7	0.767
NZ_CP009928_1	1.1\|4372662\|30\|NZ_CP009928\|CRISPRCasFinder	4372662-4372691	30	AP014324	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C64, * SEQUENCING IN PROGRESS *	23307-23336	8	0.733
NZ_CP009928_1	1.8\|4373201\|30\|NZ_CP009928\|CRISPRCasFinder	4373201-4373230	30	CP015514	Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence	416795-416824	8	0.733
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	NC_019746	Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence	164751-164780	8	0.733
NZ_CP009928_1	1.10\|4373355\|30\|NZ_CP009928\|CRISPRCasFinder	4373355-4373384	30	MN150686	Bacillus phage BC-T25, complete genome	95715-95744	8	0.733
NZ_CP009928_1	1.10\|4373355\|30\|NZ_CP009928\|CRISPRCasFinder	4373355-4373384	30	MG592529	Vibrio phage 1.161.O._10N.261.48.C5, partial genome	7368-7397	8	0.733
NZ_CP009928_1	1.11\|4373432\|30\|NZ_CP009928\|CRISPRCasFinder	4373432-4373461	30	MN150686	Bacillus phage BC-T25, complete genome	95715-95744	8	0.733
NZ_CP009928_1	1.11\|4373432\|30\|NZ_CP009928\|CRISPRCasFinder	4373432-4373461	30	MG592529	Vibrio phage 1.161.O._10N.261.48.C5, partial genome	7368-7397	8	0.733
NZ_CP009928_1	1.12\|4373509\|30\|NZ_CP009928\|CRISPRCasFinder	4373509-4373538	30	MG945637	UNVERIFIED: Microviridae sp. isolate 7081-1602, complete genome	5395-5424	8	0.733
NZ_CP009928_1	1.13\|4373586\|30\|NZ_CP009928\|CRISPRCasFinder	4373586-4373615	30	KJ081346	Bacillus phage BCP8-2, complete genome	101602-101631	8	0.733
NZ_CP009928_1	1.15\|4373740\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373740-4373769	30	MN855702	Bacteriophage sp. isolate 300, complete genome	3015-3044	8	0.733
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	NC_019401	Cronobacter phage vB_CsaM_GAP32, complete genome	323782-323811	8	0.733
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	96038-96067	8	0.733
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	96038-96067	8	0.733
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	NC_015427	Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence	27385-27414	8	0.733
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	NZ_CP021437	Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence	4782-4811	8	0.733
NZ_CP009928_1	1.16\|4373817\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373817-4373846	30	NZ_CP021437	Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence	107178-107207	8	0.733
NZ_CP009928_1	1.17\|4373894\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373894-4373923	30	NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	113381-113410	8	0.733
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KY554777	Lactococcus phage LW81, complete genome	95387-95416	8	0.733
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	NC_027341	Lactococcus phage WRP3, complete genome	98364-98393	8	0.733
NZ_CP009928_1	1.19\|4374049\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374049-4374078	30	KF926093	Lactococcus phage phiL47, complete genome	97110-97139	8	0.733
NZ_CP009928_1	1.21\|4374203\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374203-4374232	30	NC_012944	Escherichia coli Vir68 plasmid pVir68, complete sequence	123772-123801	8	0.733
NZ_CP009928_1	1.21\|4374203\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4374203-4374232	30	NZ_CP043415	Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence	43931-43960	8	0.733
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MH590604	Microbacterium phage ColaCorta, complete genome	2556-2585	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MT553340	Microbacterium phage Glamour, complete genome	2557-2586	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MN096378	Microbacterium phage MCubed, complete genome	2557-2586	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MT498062	Microbacterium phage Leafus, complete genome	2542-2571	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MH513982	Microbacterium phage Sansa, complete genome	2556-2585	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MG839030	Microbacterium phage Balsa, complete genome	2542-2571	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MT024862	Microbacterium phage Alakazam, complete genome	2826-2855	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MG839025	Microbacterium phage Raccoon, complete genome	2539-2568	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MK894432	Microbacterium phage Finny, complete genome	2557-2586	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MT451984	Microbacterium phage Nebulous, complete genome	2866-2895	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MH045555	Microbacterium phage BeeBee8, complete genome	2529-2558	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	NC_042110	Microbacterium phage Hamlet, complete genome	2542-2571	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MH590606	Microbacterium phage Andromedas, complete genome	2556-2585	9	0.7
NZ_CP009928_1	1.9\|4373278\|30\|NZ_CP009928\|CRISPRCasFinder	4373278-4373307	30	MG839027	Microbacterium phage Eleri, complete genome	2557-2586	9	0.7
NZ_CP009928_1	1.10\|4373355\|30\|NZ_CP009928\|CRISPRCasFinder	4373355-4373384	30	NZ_CP010358	Acinetobacter johnsonii XBB1 plasmid pXBB1-8, complete sequence	70061-70090	9	0.7
NZ_CP009928_1	1.11\|4373432\|30\|NZ_CP009928\|CRISPRCasFinder	4373432-4373461	30	NZ_CP010358	Acinetobacter johnsonii XBB1 plasmid pXBB1-8, complete sequence	70061-70090	9	0.7
NZ_CP009928_1	1.15\|4373740\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373740-4373769	30	MG945624	UNVERIFIED: Microviridae sp. isolate 6020-1602, complete genome	3126-3155	9	0.7
NZ_CP009928_1	1.15\|4373740\|30\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373740-4373769	30	MN855636	Bacteriophage sp. isolate 140, complete genome	19040-19069	9	0.7
NZ_CP009928_1	1.18\|4373971\|31\|NZ_CP009928\|CRISPRCasFinder,PILER-CR	4373971-4374001	31	MK448750	Streptococcus phage Javan393, complete genome	24574-24604	10	0.677

1. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to NC_019737 (Crinalium epipsammum PCC 9333 plasmid pCRI9333.07, complete sequence) position: , mismatch: 5, identity: 0.833

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
ctgtttcttgttgtgctgttgtttcttcca	Protospacer
  ****************.*.********

2. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP024328 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-9) position: , mismatch: 5, identity: 0.833

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
caatttcttcttgtgcttctatttcttcat	Protospacer
 *.****** ******* ********** *

3. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP024402 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-9) position: , mismatch: 5, identity: 0.833

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
caatttcttcttgtgcttctatttcttcat	Protospacer
 *.****** ******* ********** *

4. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP024320 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence) position: , mismatch: 5, identity: 0.833

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
caatttcttcttgtgcttctatttcttcat	Protospacer
 *.****** ******* ********** *

5. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP024210 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-3) position: , mismatch: 5, identity: 0.833

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
caatttcttcttgtgcttctatttcttcat	Protospacer
 *.****** ******* ********** *

6. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP024337 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-2) position: , mismatch: 5, identity: 0.833

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
caatttcttcttgtgcttctatttcttcat	Protospacer
 *.****** ******* ********** *

7. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP024401 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp64, complete sequence) position: , mismatch: 5, identity: 0.833

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
caatttcttcttgtgcttctatttcttcat	Protospacer
 *.****** ******* ********** *

8. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP024356 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-2) position: , mismatch: 5, identity: 0.833

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
caatttcttcttgtgcttctatttcttcat	Protospacer
 *.****** ******* ********** *

9. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP024375 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-2) position: , mismatch: 5, identity: 0.833

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
caatttcttcttgtgcttctatttcttcat	Protospacer
 *.****** ******* ********** *

10. spacer 1.13|4373586|30|NZ_CP009928|CRISPRCasFinder matches to NC_027352 (Bacillus phage JBP901, complete genome) position: , mismatch: 5, identity: 0.833

---tgaaacggcattcataagatacgaggttga	CRISPR spacer
atatgaa---gcattgctaagatacgaggttga	Protospacer
   ****   *****  ****************

11. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 6, identity: 0.8

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
taatttcttgttgtgctggtatttctttta	Protospacer
 *.*************** ********..

12. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 6, identity: 0.8

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
taatttcttgttgtgctggtatttctttta	Protospacer
 *.*************** ********..

13. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to AP013883 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C1-MedDCM-OCT-S41-C120, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
gcgctgcttgttgtcctgctaattcttcca	Protospacer
* *.* ******** ****** *******

14. spacer 1.14|4373663|30|NZ_CP009928|CRISPRCasFinder matches to MT028491 (Ochrobactrum phage vB_OspM_OC, complete genome) position: , mismatch: 6, identity: 0.8

gatcgatttctgaaggatgaacctattgaa	CRISPR spacer
tatcgatttgtgaaggatgaacataaggat	Protospacer
 ******** ************ **  **

15. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KM272358 (Salmonella phage LSPA1, complete genome) position: , mismatch: 6, identity: 0.8

atatatagataaatcatattcatcatcact	CRISPR spacer
gaatacgaataaatcaaattcatcatcact	Protospacer
. ***...******** *************

16. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KY554775 (Lactococcus phage AM11, complete genome) position: , mismatch: 6, identity: 0.8

---cattggcacttgatataatttcttgataat	CRISPR spacer
aagaatttg---ttgagataatttcttgataat	Protospacer
    *** *   **** ****************

17. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KY554773 (Lactococcus phage AM8, complete genome) position: , mismatch: 6, identity: 0.8

---cattggcacttgatataatttcttgataat	CRISPR spacer
aagaatttg---ttgagataatttcttgataat	Protospacer
    *** *   **** ****************

18. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KY554768 (Lactococcus phage AM1, complete genome) position: , mismatch: 6, identity: 0.8

---cattggcacttgatataatttcttgataat	CRISPR spacer
aagaatttg---ttgagataatttcttgataat	Protospacer
    *** *   **** ****************

19. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KY554769 (Lactococcus phage AM2, complete genome) position: , mismatch: 6, identity: 0.8

---cattggcacttgatataatttcttgataat	CRISPR spacer
aagaatttg---ttgagataatttcttgataat	Protospacer
    *** *   **** ****************

20. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KY554772 (Lactococcus phage AM5, complete genome) position: , mismatch: 6, identity: 0.8

---cattggcacttgatataatttcttgataat	CRISPR spacer
aagaatttg---ttgagataatttcttgataat	Protospacer
    *** *   **** ****************

21. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KY554770 (Lactococcus phage AM3, complete genome) position: , mismatch: 6, identity: 0.8

---cattggcacttgatataatttcttgataat	CRISPR spacer
aagaatttg---ttgagataatttcttgataat	Protospacer
    *** *   **** ****************

22. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NC_049856 (Lactococcus phage AM4, complete genome) position: , mismatch: 6, identity: 0.8

---cattggcacttgatataatttcttgataat	CRISPR spacer
aagaatttg---ttgagataatttcttgataat	Protospacer
    *** *   **** ****************

23. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KY554776 (Lactococcus phage AM12, complete genome) position: , mismatch: 6, identity: 0.8

---cattggcacttgatataatttcttgataat	CRISPR spacer
aagaatttg---ttgagataatttcttgataat	Protospacer
    *** *   **** ****************

24. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KY554774 (Lactococcus phage AM9, complete genome) position: , mismatch: 6, identity: 0.8

---cattggcacttgatataatttcttgataat	CRISPR spacer
aagaatttg---ttgagataatttcttgataat	Protospacer
    *** *   **** ****************

25. spacer 1.22|4374280|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK415400 (Phage apr34_1784, complete genome) position: , mismatch: 6, identity: 0.8

ttttccagactttcaaacaatccatttact	CRISPR spacer
gttgtcagagtttcaaacaatacatttaca	Protospacer
 ** .**** *********** *******

26. spacer 1.6|4373047|30|NZ_CP009928|CRISPRCasFinder matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 7, identity: 0.767

tgttactttgatttgactttgtaaatgtaa	CRISPR spacer
tacaaaattgatttgattttgtaaatgaaa	Protospacer
*.. *  *********.********** **

27. spacer 1.14|4373663|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP025123 (Planococcus sp. MB-3u-03 plasmid unnamed12) position: , mismatch: 7, identity: 0.767

gatcgatttctgaaggatgaacctattgaa	CRISPR spacer
tattcttttctgaaggatgaatctatagag	Protospacer
 **.  ***************.**** **.

28. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK756091 (Flavobacterium phage FCOV-F45, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

29. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK756087 (Flavobacterium phage FCOV-F16, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

30. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KM873719 (Flavobacterium phage FCL-2, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

31. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MT585282 (Flavobacterium phage FCOV-F15, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

32. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK756086 (Flavobacterium phage FCOV-F13, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

33. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK756093 (Flavobacterium phage FCOV-F54, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

34. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK756092 (Flavobacterium phage FCOV-F46, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

35. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK756096 (Flavobacterium phage V186, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

36. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MT585310 (Flavobacterium phage FCOV-F56, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

37. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MT585281 (Flavobacterium phage FCOV-F14, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

38. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK756094 (Flavobacterium phage FCOV-S1, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

39. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK756095 (Flavobacterium phage FCOV-S2, complete genome) position: , mismatch: 7, identity: 0.767

atatatagataaatcatattcatcatcact	CRISPR spacer
tagtttaggtaaatcataatcatcatcatt	Protospacer
  .* ***.********* *********.*

40. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NC_048074 (Acinetobacter phage vB_AbaM_B09_Aci01-1, complete genome) position: , mismatch: 7, identity: 0.767

cattggcacttgatataatttcttgataat	CRISPR spacer
ctttggcacttggtgtaatttcttgcacac	Protospacer
* **********.*.**********   *.

41. spacer 1.22|4374280|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ttttccagactttcaaacaatccatttact	CRISPR spacer
tttcggagacttgcaaacaatccatttgag	Protospacer
***.  ****** **************.

42. spacer 1.24|4374434|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NC_018486 (Bacillus thuringiensis HD-771 plasmid p01, complete sequence) position: , mismatch: 7, identity: 0.767

atggagtattaatcccatttttatttaaaa	CRISPR spacer
ggattgtattactcccatttttaattaaaa	Protospacer
. .  ****** *********** ******

43. spacer 1.24|4374434|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP028980 (Lactobacillus plantarum strain LQ80 plasmid pLQ803, complete sequence) position: , mismatch: 7, identity: 0.767

atggagtattaatcccatttttatttaaaa	CRISPR spacer
accgagtatgaatcccattttgatttactt	Protospacer
*. ****** *********** *****

44. spacer 1.24|4374434|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP037433 (Lactobacillus plantarum strain EM plasmid pEM4, complete sequence) position: , mismatch: 7, identity: 0.767

atggagtattaatcccatttttatttaaaa	CRISPR spacer
accgagtatgaatcccattttgatttactt	Protospacer
*. ****** *********** *****

45. spacer 1.24|4374434|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP028239 (Lactobacillus plantarum strain SRCM101511 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

atggagtattaatcccatttttatttaaaa	CRISPR spacer
accgagtatgaatcccattttgatttactt	Protospacer
*. ****** *********** *****

46. spacer 1.24|4374434|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP039728 (Bacillus sp. S3 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

atggagtattaatcccatttttatttaaaa	CRISPR spacer
gatgaaaattaatccgattattatttaaaa	Protospacer
.  **. ******** *** **********

47. spacer 1.24|4374434|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 7, identity: 0.767

atggagtattaatcccatttttatttaaaa	CRISPR spacer
aagtttaattaattccattcttatttaaaa	Protospacer
* *    ******.*****.**********

48. spacer 1.1|4372662|30|NZ_CP009928|CRISPRCasFinder matches to AP014324 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C64, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

cagaataagacgaaggatctgcaatacctt	CRISPR spacer
ttgccaaagaagaagtatctgcaataccta	Protospacer
. *   **** **** *************

49. spacer 1.8|4373201|30|NZ_CP009928|CRISPRCasFinder matches to CP015514 (Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

aggcatatatagaattcgagtaatctaatg	CRISPR spacer
ttttagatatacaattcgagtaatttaata	Protospacer
   .* ***** ************.****.

50. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to NC_019746 (Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence) position: , mismatch: 8, identity: 0.733

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
catgcagctgaaccactccaaattttcgtc	Protospacer
 . .*.* ************ ********

51. spacer 1.10|4373355|30|NZ_CP009928|CRISPRCasFinder matches to MN150686 (Bacillus phage BC-T25, complete genome) position: , mismatch: 8, identity: 0.733

tttctaactcgtcaatacattgttctgcgt	CRISPR spacer
tttctaaatcgtcaatacgttgtgaaattt	Protospacer
******* **********.****   .. *

52. spacer 1.10|4373355|30|NZ_CP009928|CRISPRCasFinder matches to MG592529 (Vibrio phage 1.161.O._10N.261.48.C5, partial genome) position: , mismatch: 8, identity: 0.733

tttctaactcgtcaatacattgttctgcgt	CRISPR spacer
tctctaacccgtcaataaattgttcccaca	Protospacer
*.******.******** *******.

53. spacer 1.11|4373432|30|NZ_CP009928|CRISPRCasFinder matches to MN150686 (Bacillus phage BC-T25, complete genome) position: , mismatch: 8, identity: 0.733

tttctaactcgtcaatacattgttctgcgt	CRISPR spacer
tttctaaatcgtcaatacgttgtgaaattt	Protospacer
******* **********.****   .. *

54. spacer 1.11|4373432|30|NZ_CP009928|CRISPRCasFinder matches to MG592529 (Vibrio phage 1.161.O._10N.261.48.C5, partial genome) position: , mismatch: 8, identity: 0.733

tttctaactcgtcaatacattgttctgcgt	CRISPR spacer
tctctaacccgtcaataaattgttcccaca	Protospacer
*.******.******** *******.

55. spacer 1.12|4373509|30|NZ_CP009928|CRISPRCasFinder matches to MG945637 (UNVERIFIED: Microviridae sp. isolate 7081-1602, complete genome) position: , mismatch: 8, identity: 0.733

gagtttcttgttgtgctgctatttcttcct	CRISPR spacer
tttcttcttgttgtcgtgctatttcttgtt	Protospacer
   .**********  *********** .*

56. spacer 1.13|4373586|30|NZ_CP009928|CRISPRCasFinder matches to KJ081346 (Bacillus phage BCP8-2, complete genome) position: , mismatch: 8, identity: 0.733

tgaaacggcattcataagatacgaggttga	CRISPR spacer
atacgaagcattactaagatacgaggttga	Protospacer
  * . .*****  ****************

57. spacer 1.15|4373740|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MN855702 (Bacteriophage sp. isolate 300, complete genome) position: , mismatch: 8, identity: 0.733

gtattcctcatatttctgagtctctggcca	CRISPR spacer
taattcctcatatttttgagtctcctgtgg	Protospacer
  *************.********. *. .

58. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NC_019401 (Cronobacter phage vB_CsaM_GAP32, complete genome) position: , mismatch: 8, identity: 0.733

atatatagataaatcatattcatcatcact	CRISPR spacer
caataaagataaatcatattcatctggata	Protospacer
  *** ******************   *.

59. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 8, identity: 0.733

atatatagataaatcatattcatcatcact	CRISPR spacer
ctttataaataaattatattcatcattttc	Protospacer
 * ****.******.***********. ..

60. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 8, identity: 0.733

atatatagataaatcatattcatcatcact	CRISPR spacer
ctttataaataaattatattcatcattttc	Protospacer
 * ****.******.***********. ..

61. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NC_015427 (Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence) position: , mismatch: 8, identity: 0.733

atatatagataaatcatattcatcatcact	CRISPR spacer
attatcctttaaagcatattcatcatcact	Protospacer
**   .   **** ****************

62. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP021437 (Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence) position: , mismatch: 8, identity: 0.733

atatatagataaatcatattcatcatcact	CRISPR spacer
tggtttagatccatcatattcatcatcaga	Protospacer
  .* *****  ****************

63. spacer 1.16|4373817|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP021437 (Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence) position: , mismatch: 8, identity: 0.733

atatatagataaatcatattcatcatcact	CRISPR spacer
tggtttagatccatcatattcatcatcaga	Protospacer
  .* *****  ****************

64. spacer 1.17|4373894|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP024924 (Sphingomonas sp. Cra20 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

cctctccttgtgtgagacgctcaaatcaca	CRISPR spacer
cccctccttgtgtgaaacgctcacccttcc	Protospacer
**.************.*******  .. *

65. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KY554777 (Lactococcus phage LW81, complete genome) position: , mismatch: 8, identity: 0.733

cattggcacttgatataatttcttgataat	CRISPR spacer
aagagtttgttgagataatttcttgataat	Protospacer
 *  * .  **** ****************

66. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NC_027341 (Lactococcus phage WRP3, complete genome) position: , mismatch: 8, identity: 0.733

cattggcacttgatataatttcttgataat	CRISPR spacer
aagagtttgttgagataatttcttgataat	Protospacer
 *  * .  **** ****************

67. spacer 1.19|4374049|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to KF926093 (Lactococcus phage phiL47, complete genome) position: , mismatch: 8, identity: 0.733

cattggcacttgatataatttcttgataat	CRISPR spacer
aagagtttgttgagataatttcttgataat	Protospacer
 *  * .  **** ****************

68. spacer 1.21|4374203|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NC_012944 (Escherichia coli Vir68 plasmid pVir68, complete sequence) position: , mismatch: 8, identity: 0.733

gctccctgggttaataatgcatattagatc	CRISPR spacer
ttatcctgggttaataaagcatattggtta	Protospacer
 . .************* *******.* *

69. spacer 1.21|4374203|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to NZ_CP043415 (Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence) position: , mismatch: 8, identity: 0.733

gctccctgggttaataatgcatattagatc	CRISPR spacer
ttatcctgggttaataaagcatattggtta	Protospacer
 . .************* *******.* *

70. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MH590604 (Microbacterium phage ColaCorta, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

71. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MT553340 (Microbacterium phage Glamour, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

72. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MN096378 (Microbacterium phage MCubed, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

73. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MT498062 (Microbacterium phage Leafus, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

74. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MH513982 (Microbacterium phage Sansa, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

75. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MG839030 (Microbacterium phage Balsa, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

76. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MT024862 (Microbacterium phage Alakazam, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcctggacca	Protospacer
*** ***************** .*    ..

77. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MG839025 (Microbacterium phage Raccoon, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

78. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MK894432 (Microbacterium phage Finny, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

79. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MT451984 (Microbacterium phage Nebulous, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcctggacca	Protospacer
*** ***************** .*    ..

80. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MH045555 (Microbacterium phage BeeBee8, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

81. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to NC_042110 (Microbacterium phage Hamlet, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

82. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MH590606 (Microbacterium phage Andromedas, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

83. spacer 1.9|4373278|30|NZ_CP009928|CRISPRCasFinder matches to MG839027 (Microbacterium phage Eleri, complete genome) position: , mismatch: 9, identity: 0.7

ggaacgggtgaaccactccatattttcgtg	CRISPR spacer
ggaccgggtgaaccactccatcatcgacca	Protospacer
*** *****************  *.   ..

84. spacer 1.10|4373355|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP010358 (Acinetobacter johnsonii XBB1 plasmid pXBB1-8, complete sequence) position: , mismatch: 9, identity: 0.7

-----tttctaactcgtcaatacattgttctgcgt	CRISPR spacer
gagagt-----actcgtcaataccttgttctgatc	Protospacer
     *     ************ ********  .

85. spacer 1.11|4373432|30|NZ_CP009928|CRISPRCasFinder matches to NZ_CP010358 (Acinetobacter johnsonii XBB1 plasmid pXBB1-8, complete sequence) position: , mismatch: 9, identity: 0.7

-----tttctaactcgtcaatacattgttctgcgt	CRISPR spacer
gagagt-----actcgtcaataccttgttctgatc	Protospacer
     *     ************ ********  .

86. spacer 1.15|4373740|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MG945624 (UNVERIFIED: Microviridae sp. isolate 6020-1602, complete genome) position: , mismatch: 9, identity: 0.7

gtattcctcatatttctgagtctctggcca	CRISPR spacer
cacatcctcagatttctgaggctctggaag	Protospacer
    ****** ********* ******  .

87. spacer 1.15|4373740|30|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MN855636 (Bacteriophage sp. isolate 140, complete genome) position: , mismatch: 9, identity: 0.7

gtattcctcatatttctgagtctctggcca	CRISPR spacer
cagttcctcatatttttgagtctcctgtgg	Protospacer
  .************.********. *. .

88. spacer 1.18|4373971|31|NZ_CP009928|CRISPRCasFinder,PILER-CR matches to MK448750 (Streptococcus phage Javan393, complete genome) position: , mismatch: 10, identity: 0.677

tccatagtctccagaatcaattgtttccttg	CRISPR spacer
tccattgtctcaagaatcaattgacgatgca	Protospacer
***** ***** *********** .  . ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3468298 : 3479504

Staphylococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053328599.1\|3468298_3469477_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	4.5e-74	44.7
WP_053328600.1\|3469479_3471690_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	1.7e-13	37.7
WP_053328601.1\|3471799_3472165_-	hypothetical protein	NA	NA	NA	NA
WP_050021322.1\|3472475_3474383_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.7e-83	39.5
WP_053328602.1\|3474518_3476405_-	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	3.3e-63	32.1
WP_050021320.1\|3476429_3476789_-	response regulator	W8CYM9	Bacillus_phage	2.8e-11	31.9
WP_053328603.1\|3476798_3479504_-	sodium:proline symporter	W8CYF6	Bacillus_phage	3.5e-21	30.6

DBSCAN-SWA_2

4348213 : 4412271

Bacillus_phage(18.18%)

integrase,protease,transposase,bacteriocin

attL 4363555:4363570|attR 4419055:4419070

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050020748.1\|4348213_4348855_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_053329094.1\|4348866_4351452_-	DNA gyrase/topoisomerase IV subunit A	A0A127AYR4	Bacillus_phage	3.1e-27	39.8
WP_050020747.1\|4351459_4351936_-	hypothetical protein	NA	NA	NA	NA
WP_053329095.1\|4351952_4353836_-	type IIA DNA topoisomerase subunit B	A0A172JHT4	Bacillus_phage	4.2e-66	30.4
WP_053329096.1\|4353969_4356897_+	histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-16	29.9
WP_050020743.1\|4356886_4357618_+	response regulator transcription factor	NA	NA	NA	NA
WP_053329097.1\|4357717_4358866_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_050020742.1\|4359072_4359273_+	hypothetical protein	NA	NA	NA	NA
WP_050020741.1\|4359339_4360104_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.1e-12	26.3
WP_053329435.1\|4360191_4361130_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_128572284.1\|4361275_4361467_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_128572282.1\|4361500_4361671_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_167336375.1\|4361693_4361855_+	hypothetical protein	NA	NA	NA	NA
WP_050020738.1\|4361997_4363089_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_053329098.1\|4363267_4363819_-	ferritin	NA	NA	NA	NA
4363555:4363570	attL	NA	NA	NA	NA
WP_053329099.1\|4364040_4365657_-	family 10 glycosylhydrolase	NA	NA	NA	NA
WP_053329100.1\|4365783_4367589_-	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	3.0e-21	40.1
WP_050020735.1\|4367902_4368451_-	type 1 glutamine amidotransferase	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	9.8e-16	32.1
WP_053329101.1\|4368565_4368817_-	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_050021381.1\|4368947_4369304_+	hypothetical protein	NA	NA	NA	NA
WP_053329436.1\|4369408_4370083_-	YceI family protein	NA	NA	NA	NA
WP_053329102.1\|4370500_4372495_+	gliding motility-associated C-terminal domain-containing protein	NA	NA	NA	NA
WP_050022725.1\|4374567_4374906_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_050022726.1\|4374902_4375796_-	type II CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_053329437.1\|4375805_4380014_-	type II CRISPR RNA-guided endonuclease Cas9	NA	NA	NA	NA
WP_053329103.1\|4380232_4382356_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_053329104.1\|4382358_4383615_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_053329105.1\|4383683_4384319_+	HAD family hydrolase	NA	NA	NA	NA
WP_050020440.1\|4384415_4385987_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_053329106.1\|4386145_4387291_-	hypothetical protein	NA	NA	NA	NA
WP_027381692.1\|4387465_4387642_-	histone H1	NA	NA	NA	NA
WP_050020437.1\|4387881_4389366_+	peptidase	NA	NA	NA	NA
WP_053329107.1\|4389686_4390193_+	hypothetical protein	NA	NA	NA	NA
WP_050020435.1\|4390270_4391188_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_050020482.1\|4391267_4392473_+	MFS transporter	NA	NA	NA	NA
WP_050020434.1\|4392503_4392857_-	DUF488 domain-containing protein	NA	NA	NA	NA
WP_053329108.1\|4393099_4393558_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_053329109.1\|4393570_4394419_+	universal stress protein	NA	NA	NA	NA
WP_053329110.1\|4394477_4395122_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_053329438.1\|4396052_4396778_-	6-phosphogluconolactonase	NA	NA	NA	NA
WP_050020481.1\|4396807_4398289_-	glucose-6-phosphate dehydrogenase	A0A1D8KIX9	Synechococcus_phage	1.1e-74	35.3
WP_053329111.1\|4398300_4399698_-	NADP-dependent phosphogluconate dehydrogenase	E3SKF4	Synechococcus_phage	9.8e-28	29.9
WP_053329112.1\|4399938_4401195_-	plasmid recombination protein	NA	NA	NA	NA
WP_053329113.1\|4401525_4402470_-	toprim domain-containing protein	NA	NA	NA	NA
WP_053329114.1\|4402834_4404025_-	virulence-associated protein E	M1NXJ3	Cellulophaga_phage	1.9e-35	29.0
WP_174441966.1\|4404105_4404375_+	hypothetical protein	NA	NA	NA	NA
WP_082129237.1\|4404627_4404906_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_053329439.1\|4404908_4405205_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_053329117.1\|4405460_4405871_-	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_053329118.1\|4405872_4406373_-	heme-binding protein	NA	NA	NA	NA
WP_053329119.1\|4406369_4406873_-	heme-binding protein	NA	NA	NA	NA
WP_053329120.1\|4406958_4407702_-	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA
WP_053329121.1\|4407961_4409251_+\|transposase	IS1380-like element IS612 family transposase	NA	NA	NA	NA
WP_053329123.1\|4409797_4411036_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	2.0e-16	29.0
WP_053329124.1\|4411041_4412271_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	2.4e-22	35.0
4419055:4419070	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage