Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
---|---|---|---|---|---|---|---|
NZ_CP011541 | Corynebacterium epidermidicanis strain DSM 45586 chromosome, complete genome | 5 crisprs | csa3,cas3,DEDDh,WYL,cas4,DinG | 5 | 4 | 2 | 0 |
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NZ_CP011541_1 | 457186-457521 | Orphan |
NA
Consensus repeat of NZ_CP011541_1
|
5 spacers
spacers of NZ_CP011541_1
>1.1|457215|32|NZ_CP011541|CRISPRCasFinder TACGGCTCACTGGATTCCCAAGATCTTGGGAA >1.2|457276|32|NZ_CP011541|CRISPRCasFinder GCTTCCCATCTCCGGGAAGCTTTCGGGAAAAC >1.3|457337|33|NZ_CP011541|CRISPRCasFinder CTATACGGTCAAAAATGACCGGGTACAAGACTC >1.4|457399|32|NZ_CP011541|CRISPRCasFinder CGATGACGTAAGCCAGGCTGACGTCACCGATC >1.5|457460|33|NZ_CP011541|CRISPRCasFinder GGATTTCTCGGAAATTTCCGATAAACCCTCCGA |
CRISPR arrays and Neighbor proteins around NZ_CP011541_1
The CRISPR arrays of NZ_CP011541_1 >merge|NZ_CP011541|1|457186-457521|CRISPRCasFinder TCTGTTCCCCGTAGGCGCGAAGCGACGTTTACGGCTCACTGGATTCCCAAGATCTTGGGAATCTGTTCCCCCTAGGCGCGAAGCGACGTTGCTTCCCATCTCCGGGAAGCTTTCGGGAAAACCCTGTTCCCCGTGGGCGCGAAGCGGCGTTCTATACGGTCAAAAATGACCGGGTACAAGACTCCTTGTTCCCCGTAGGCGCGAAGCGACGTTCGATGACGTAAGCCAGGCTGACGTCACCGATCCCTGTTCCCCGTGGGCGCGAAGCGGCGTTGGATTTCTCGGAAATTTCCGATAAACCCTCCGACCCATTCCCCGTAGGTGTGAAGCGACGTA >NZ_CP011541|1|1|457186-457521|CRISPRCasFinder TCTGTTCCCCGTAGGCGCGAAGCGACGTT TACGGCTCACTGGATTCCCAAGATCTTGGGAA TCTGTTCCCCCTAGGCGCGAAGCGACGTT GCTTCCCATCTCCGGGAAGCTTTCGGGAAAAC CCTGTTCCCCGTGGGCGCGAAGCGGCGTT CTATACGGTCAAAAATGACCGGGTACAAGACTC CTTGTTCCCCGTAGGCGCGAAGCGACGTT CGATGACGTAAGCCAGGCTGACGTCACCGATC CCTGTTCCCCGTGGGCGCGAAGCGGCGTT GGATTTCTCGGAAATTTCCGATAAACCCTCCGA CCCATTCCCCGTAGGTGTGAAGCGACGTA
>NZ_CP011541.1|WP_047239574.1|456858_457173_+|hypothetical-protein MTPDELIKFTGATGPNVQAQAQQALSMAEAFVDAYCRGRHKRGGVLRPGVDAVITAVAARILANPEQIQQREQVGPYSFYRDAGFQGFNLVELAVLNRYRKRAK >NZ_CP011541.1|WP_047239573.1|456502_456862_+|hypothetical-protein MSRLQGESVRVVTGVQRNQYGKVIGTTGVDFLAVVVPESTDTLKGDGGGLVAVVATRARLLVPHGWSVPAGVKPGAEIEVRGATWYVDGEVSKHVSPFGTRVGGVEVKLSKSMAGGVPL >NZ_CP011541.1|WP_047239572.1|455660_456503_+|phage-major-capsid-protein MATNTTSNHGTLIKDQVSTMLVQPLEAASIVLASGPTIFPSSEPVRVPRLDSSGDVTWVGEGELIPDNYTAGFSEIPLMPKERKSLKVICRFTNELIRMAAIGVSPIMQQRIVTDVKNKLDDALLVGDGSDNTITGIFNQPGTQKGALDLSKPDSLLDALALTTAKEVTPNRWFINAGDFFTLRKVKDGNGRYILTEDITSDTTYKLFGIPVTVSNKVPAGKAALLDMKQVAVVRDVDPAITILNERYAEYDEVGIRVVTRYDLGLLNPKGVVILEAAGA >NZ_CP011541.1|WP_144413419.1|454994_455522_+|hypothetical-protein MENQEVKNEVPHGDDRYAVSNGHDDPNSNLGVEPNGMTASEVNRGEDRDGSNRGDEHPTKDAAEHDSPDMFPRKVVEDLRKEAAKYRERAKRTDTLEQQLHLALVKLDGRLADPADLPFHAEHLEDPEQLSAAITALVEKNPRMKAMRPIGDAGQGNRGGAKPAEFDLIKAIRGY >NZ_CP011541.1|WP_047239571.1|453682_454990_+|phage-portal-protein MRVSTESLVARLDHAQPVIARRDMYYRGRQPLRFMKSTVDPQIAGFTANLCKVAVGAVGERLNVTGILASVDGRDVSERAWKLWADADMPMLVQAALVDALAVGSAFLVVWADEFGRPSISVETAEHVVVERDPITNGVVGALKRWVVRDHNNVELATHFVKYLPKEIVHLEQSATDGKLRFVRSIPNPLGVVPVVELLNIERVGDQAGSSVVDDLAPLVDALNKLIVDMLVTSEAVARPKRWVTGVELEDPESVFLPDAGFEADAPVEVVDVDAVADEVSAESPFKDSDDLWVAEQADAKFGQLQGADLAGYETGVNLIVQQIMAISGLPGHLVGVTTSNPATAEALRASEVALTSRAQSRIRVFDKPLEWAVRLMVAIDAGVSPDRVEASVQWADPSTRSIAQEADAAVKLVQQEVISTDEARARVGEEKIGA >NZ_CP011541.1|WP_052843292.1|452225_453686_+|hypothetical-protein MSLKRGPKGPRVLEPLPWKSRAKVGTVEHFRLFCHRFLKVPKGVGALSPFRPRPWQLEAVRPFFEGEAKTNLLCIPRGNGKSGLIAAVSLYRLFYGGEGSAGLVVAQNDTRARALVKTMARMVELNEDLACRCEIYKDKITYPFTDSHVLAVASEQSAVEGEDLTTAIVDEIGFVERDVFEAALLSLKRPGSKLFGIGTPSKPRMRDRSPFWDLVVAARGGDPSVSLVEYGAPDNAASDDWDAIIAANPAYGDFLDAETVRAQAPPKTSEAEWRRARMGVWITQSGESFMPADAWRRQARPGVQIPRGTKVVLALDGSQRWDATVLMMASVSAKPHLEVAGWWFGDHDPDYEVSHAEVEARVLELARQYKVVEVTGDPFLWMRTLQVLEDAGLRVTKFSQSAGRMSPSLAEFKAAALDGNLTHAEDQRLNKHMLAAQIKESGTGMKLDKASKTQHIDGAVASVMAYSRAFWLGSKRFKKKVRSFKR >NZ_CP011541.1|WP_047239569.1|451477_451684_+|hypothetical-protein MQRIEAAIPLPEVAVKRSKRKGPHVRIRIDKTWYRLTTAEAYTLANRLVDAAEEVQHRNATKLGKESC >NZ_CP011541.1|WP_047239568.1|450359_451352_+|AAA-family-ATPase MEPLIKPHKPAKYVDPEAPELPAFHILTREEIDAIPDLEPLIKGVIDQGTVAMLAAQPAAGKTFLALDWACCYATGKRWQGHDTEATGNVLYIAAEGARGIKQRLNAWEQAWKTTVPAAAFHLIDKPVNLGSILQVERLIGQIEAGEYGLVVVDTVARCSLGLEENSATDMGKVVDSLYRIREAMGDHGTVLAVHHTGKSGEVRGSSALLGGVDQLMKLERSGGGLILQDEKRKDGRGLAPIGLRLSESHGSMIIESDAPEFREADHTLLIEMAAIRNALPLTLPQLKAAVDMHDRDVYRQLSYWIDQGRVTSTNEKNPRYNLVEEQGFI >NZ_CP011541.1|WP_052843290.1|449553_450372_+|bifunctional-DNA-primase/polymerase MTNLPINNSEMCMWAVELASQGFEVFPLHPRGTIGHDGEPKEKTPIYFGGHNNASSSCDLAQEIWTDHPNANIGIRVPEGHCVIDIDPRHGGFETFSQILGDNPFPETLTTLTGSEGLHLWFNLPDDRSTRGNNAAPGIDIKTRTGYVVAPGSWHPNGNRYQWERFMEVAMLPDYLEDLVYKPRRPRGHFRRETSWTWGDRNADGLIRCVAEAPDGNRNNILFWAACVAYEDGLRILYQLEDAALSAGLELYEIERTINSAARKIMGAQWNH >NZ_CP011541.1|WP_047239567.1|448690_449311_+|hypothetical-protein MYENMSDDELMEHFKAFSKQQPEPTSLPKSKWLARRKRSLRRFSDPTTIQIVCSHKSGTLSNKRPATLGEAIIEMDTSRASHIALDWNPVRGNMNNRMNRKGHYNPVAIDEAVPPPSPEELRRRGIDEDHLEYHDAEGLERLGTKGMSRVRRNAITNYYADQLICPRCTMHVSRNDEVLKQILRGIADAGMTKLDIQYIDFYAKML >NZ_CP011541.1|WP_047239575.1|457639_457870_-|hypothetical-protein MTDNNDAITLAEAITDQVLIQLVCHFPASTSDFPNTVTVDDLQNVAKLTGTTVSHIFEEAETIVGQPKDRLSFSVR >NZ_CP011541.1|WP_158408009.1|458250_458394_+|hypothetical-protein MLVLPHLVGPFSIYTPTFTLANAKNFDSMEADNSTAFNNIGGQGLAL >NZ_CP011541.1|WP_047239576.1|458421_458712_+|WXG100-family-type-VII-secretion-target MNQMIKYSFGEIETAAMDINATSGRINSLLDALKTQIQPMVATWEGTSATAYQEAQQKWDRSAAELNTILATIASTVREGNDRMSEVNRMAAASWG >NZ_CP011541.1|WP_047239577.1|459005_459449_+|50S-ribosomal-protein-L13 MSTFHPKSGDVTRKWYVIDATDVVLGRLAVTAADLLRGKRKPYFAPNVDCGDYVIIINADKVHISSNKRDREFRYRHSGYPGGLKTMTLGRSMELHPERVVFEAIEGMMPHNKLTRASVKKLRVFAGSEHPYAAQKPETFEIKQVAQ >NZ_CP011541.1|WP_047239578.1|459448_459988_+|30S-ribosomal-protein-S9 MTEANINETQAADAADIAAATAATEEFTNTIGDAINVETASEDAVAAPVITEGPIQTVGRRKRAIVRVRMVAGSGQITCNGRTLEDYFPNKLHQQLIKAPLVLIDREGQFDIQANLVGGGPTGQAGALRLAIARALNAYNPADRAALKKAGFLTRDARAVERKKAGLHKARRAPQYSKR >NZ_CP011541.1|WP_047239579.1|461087_462548_+|VaFE-repeat-containing-surface-anchored-protein MIQLHTAGGNHRATAGKSSAFSRIFAFVAAIALVFPGVVAVQSHKPVQAAAAYDYRAFSTWSYDSNSIYVRNINNPNEIYEGFCFNHDAEQTSRFLEHPDWYAGQEDRFDYRRLDIVNGATLNSYMSDKSLLKVTDNDPAKLAQLYERFQKVLYYAQYLPSSDGSRQIPDAPLMYNGYKVSDLIWAMTNSANGRQENPPMWAVLDELFQKPVPPGNFQLFFFEAKYWSNDGQGVQNVISGQFVPNTPVPNENPSMGTVVKDNFTSSTGAPAVDAFGKVVNDSLTPRVNETLVNRPITSAQAQNVISDVVALNNFNKNQSYDLYTWLVDKETGAIAGGVKKSEIQANSQELIDGQVTVDLVLDRDWVQQQLDAAVAQQAPISKHYVVFEAAYAAGTSVTTDSNGIPTSPSYAEHKELGSLDQTVWLTFYGGPTIHTNAWSEQDSKTVYIKDGKAVVFDEISFANLNDGSYTFETSAFINGKNNLPKR >NZ_CP011541.1|WP_047239580.1|462658_466429_+|VaFE-repeat-containing-surface-anchored-protein MRYEIDASELNAGESNRITMTEVLYQADVSGNPVGRPIASHEDKDSTAQTVIVAPTLGIGTTAGFDKTEGPKLKNLAVDDVNPQTIFDTIRLDNFQDDQTEYVAFAELVEYGTNNVIARGSQEFKGIDGDYFVDVLIELSADFIKNVEPNVSNAFTVLEYVYKKSDLPGGVVTSTKPVQSVTPIATHIDPYSAEQTVGLVRQADNAVLGTTATAGGNKTITAGETATITDVVKYKGLIPNTWYKLTAELMDKSDLSKPVQTKTVIFQATEADGEQSVTFDEVTAQVGHDYVVFETLSISATNANNELVKNSAGNPATEYVVGYHRDAADAGQTVTVEAPGAFPVTISKVDIAGNELPGANIQIRQGDKVVEEWESTTTARVISLPEGDYVFHEVAAPNGYVAVTDINFHVDAKGQVSVDGVAQGATLKVTDEASNITTTATDKADGDKVLPSTGGIIVDEVAFTGLTVGEKYIVSGKLMLKDDSATGAETGITAWGSFIAAEANPKVKLEFVVPGTFAGEELVVFERAWDANGNLENASGTQPQDFTQGEGTAPTPPSDAKVITHEDINSASQTVSVMPTLTPGTQEITISKVDIAGAEVEGASITVTGPNGFKEAWTSTSTPHVLTLEPGEYVFHEVSAPKGLVEVSDIVFVVNTDGTVVATKYNNNPIVDGDLANIVDSNGAKLTITDKPAVEISKINIAGDELVGAQITVSGPNGFEETWTSTSTPHLIKLAEGDYVFHEIAAPTGYLAVTDIKFHVDARGQVTLTDVNGNTVTAEGHKLIVTDQAEAGLQTPSPSATPSPSPIETPSPKPAPSAAQTPSPSPTLSPSPTLSPSPTPSPSANPESPKLATSAVDKLDKDKVVEPSGTVIDTVDYSGLTVNKTYTIVGELMDKNTGLGTGIKQSKTFTTTTANGSIDLEFTIPAGHEGQILVAFETLLEGSVTLADSGIKDGVTEKPSLASHRDINDFKQTVYVSQKFGTTAELSEGNTVVDTIKYVGLPVGTQVVFLGTLVDENGKEVAKAATSVVAPAEARVTFTLSDAQLETYAGQKLVVFEEGYVVVPTKTPGSETLQVQDENGNRVDLNVIKIGEHKDLKSVPQTVVIPTTSVVPATTPSTPPLSSVTEVPGSSIDGNWWIAIPVLIGAGLLSSAGSSDVHVSSDKPNMAPVPTPSPTPTTAVGAPTTSAPAMPTPAVSGVANAAPQQDKPENKVVGIAKGKNKSGVLANTGASVLGIALIAAITLLLGAALVKRRKES >NZ_CP011541.1|WP_047239581.1|466536_467070_-|type-1-glutamine-amidotransferase MSKLLGKKIAVLVTNGFEDSELTRPIEAVKTAGAEVVVISTESGEIEGKNGTTVAVDLETAKAVAADFDALLLPGGVNNTDTIRTDKHAVAFVAEIFAAAKPTGVICHGGSILTDADVLRGRTLTSYPSIKTDLVNAGANWVDEEVHVDRGLVSSRTPADLDAFNAKIVEEFAEGKH >NZ_CP011541.1|WP_047239582.1|467238_468582_+|phosphoglucosamine-mutase MTRLFGTDGVRGLANETLTVNLALRLGQAAAEVLTRENRSSKRRPIAVVGRDPRVSGEMLAAALSAGMASRGVDVLRVGVLPTPAVAFLTDDYGADMGVMVSASHNPMPDNGIKFFAAGGHKLADEVEDEIERVLNENIETGPTGHGVGRVLEESPDARERYLNHLRDAVPANLNGIKVVVDCANGAASDVAPMAYQAAGAEVIAIHNSPNSYNINENCGSTHIEEIQKAVVEHGADLGLSHDGDADRCLAVDAHGNVVDGDQIMAILAIAMKDNGELRKHTLVATVMSNLGLMLAMKDAGIEVKTTKVGDRYVLEELNAGNYSLGGEQSGHIVLPDFGTTGDGTLTGLALMARMANTGLSLGSLAEAMTVLPQKLINVPVTDKTIVMSSPKVLEAIEIAETELGETGRVLLRASGTEEVFRVMVEAADADTAVRIAGRLAAVVAEV >NZ_CP011541.1|WP_052843294.1|468679_468979_+|hypothetical-protein MFDIDLDVVAATTALTALIDDTSAELTRHQQTVPTYPVAAAGKGFAAHGEALAKAYAATHDMLGQRISAALATSEAARVEVRRFASEDDGFAENIGGGY |
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CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NZ_CP011541_2 | 924492-925013 | Orphan |
NA
Consensus repeat of NZ_CP011541_2
|
9 spacers
spacers of NZ_CP011541_2
>2.1|924510|69|NZ_CP011541|CRT CGTTGTTTCCGTGGTGGCTGTTGTTTCCGTGGTGGCTGCTGGTTCCGTGGTGGTGGCTGCGGGCGCCGG >2.2|924597|42|NZ_CP011541|CRT CGTTGTTTCCGTGGTGGCTGCTGTTTCGGTGGTGGCCACTGT >2.3|924657|54|NZ_CP011541|CRT TGGTTCCGTGGTGGTGGCTGCGGGCGCCGGGTCTGTGGTGGTAGCAGTCGTTGT >2.4|924729|21|NZ_CP011541|CRT TTCGGTAGTGGTGGCTGCTGG >2.5|924768|33|NZ_CP011541|CRT GGGCGCCGGGTCTGTGGTGGTGGCAGTCGTTGT >2.6|924819|18|NZ_CP011541|CRT TTCGGTGGTGGCTGCTGG >2.7|924855|33|NZ_CP011541|CRT GGGCGCCGGGTCTGTGGTGGTAGCAGTCGTTGT >2.8|924906|39|NZ_CP011541|CRT TTCGGTGGTGGCCACTGTTTCGGTAGTGGTGGCTGCTGG >2.9|924963|33|NZ_CP011541|CRT GGGCGCCGGGTCTGTGGTGGTGGCAGTCGTTGT |
CRISPR arrays and Neighbor proteins around NZ_CP011541_2
The CRISPR arrays of NZ_CP011541_2 >merge|NZ_CP011541|2|924492-925013|CRT GTCTGTGGTGGTGGCAGTCGTTGTTTCCGTGGTGGCTGTTGTTTCCGTGGTGGCTGCTGGTTCCGTGGTGGTGGCTGCGGGCGCCGGGTCTGTGGTGGTGGCAGTCGTTGTTTCCGTGGTGGCTGCTGTTTCGGTGGTGGCCACTGTTTCGGTGGTGGTGGCTGTTGGTTCCGTGGTGGTGGCTGCGGGCGCCGGGTCTGTGGTGGTAGCAGTCGTTGTTTCCGTGGTGGCTGTTGTTTCGGTAGTGGTGGCTGCTGGTTCCGTGGTGGTGGCTGCGGGCGCCGGGTCTGTGGTGGTGGCAGTCGTTGTTTCCGTGGTGGCTGCTGTTTCGGTGGTGGCTGCTGGTTCCGTGGTGGTGGCTGCGGGCGCCGGGTCTGTGGTGGTAGCAGTCGTTGTTTCCGTGGTGGCCGCTGTTTCGGTGGTGGCCACTGTTTCGGTAGTGGTGGCTGCTGGTTCCGTGGTGGTGGCTGCGGGCGCCGGGTCTGTGGTGGTGGCAGTCGTTGTTTCCGTGGTGGTGACCAC >NZ_CP011541|2|1|924492-925013|CRT GTCTGTGGTGGTGGCAGT CGTTGTTTCCGTGGTGGCTGTTGTTTCCGTGGTGGCTGCTGGTTCCGTGGTGGTGGCTGCGGGCGCCGG GTCTGTGGTGGTGGCAGT CGTTGTTTCCGTGGTGGCTGCTGTTTCGGTGGTGGCCACTGT TTCGGTGGTGGTGGCTGT TGGTTCCGTGGTGGTGGCTGCGGGCGCCGGGTCTGTGGTGGTAGCAGTCGTTGT TTCCGTGGTGGCTGTTGT TTCGGTAGTGGTGGCTGCTGG TTCCGTGGTGGTGGCTGC GGGCGCCGGGTCTGTGGTGGTGGCAGTCGTTGT TTCCGTGGTGGCTGCTGT TTCGGTGGTGGCTGCTGG TTCCGTGGTGGTGGCTGC GGGCGCCGGGTCTGTGGTGGTAGCAGTCGTTGT TTCCGTGGTGGCCGCTGT TTCGGTGGTGGCCACTGTTTCGGTAGTGGTGGCTGCTGG TTCCGTGGTGGTGGCTGC GGGCGCCGGGTCTGTGGTGGTGGCAGTCGTTGT TTCCGTGGTGGTGACCAC
>NZ_CP011541.1|WP_144413445.1|923891_924194_-|LPXTG-cell-wall-anchor-domain-containing-protein MPILMPTSSAGHVLGINNPAPASQTDRVLGVSNPAPAQGHTTSNAQPSVPQQVELKNADRAATTQGRALANTGASVFQLMLLALATLVAGLAFAIRRKAD >NZ_CP011541.1|WP_047239911.1|922196_923603_-|class-II-fumarate-hydratase MTEQEFRIEHDTMGEVKVPVNALWRAQTQRAVENFPISGRGLEAQQIRAMGLLKAACAQVNKDKGLLDATFADAIIAAGKEIAEGKHDAEFPIDVFQTGSGTSSNMNTNEVIASIAKANGVEIHPNDHVNMGQSSNDTFPTATHVAATEAAVNDLIPGLKVLHASLAKKATEWKDVVKSGRTHLMDAVPVTLGQEFAGYARQIEAGIERVEATLPRLGELPIGGTAVGTGLNTTADFGALVTEELKKLTGVAELREAKNHFEAQANRDALVEFSGAMRTIAVSLTKIANDIRWMGSGPLTGLGEIHLPDLQPGSSIMPGKVNPVLCETATQVAAQVVGNDAAVAFGGAQGAFELNVFIPMMARNVLESARLLANTSRVFAERLVDGIEPNVERMRTLAESSPSIVTPLNSAIGYEAAAKVAKTALKEGKTIRQTVIDLGFVDGEKLTEEELDKRLDVLAMANTDRDNF >NZ_CP011541.1|WP_052843375.1|921460_922129_+|GntR-family-transcriptional-regulator MPFKLDIMTATPNQLAEILTARILGGDIASGDKLLEAVLASDLGVSRNTLRETFRMLARDGLVEHIPHRGVFVKVLSPREVVELFAYRRFLELGSIKFFADCTADAQNALVVMSKVIDVALTAASVRDWNQVGVQNNEFHAALVGASGIPRLVDNVRLAMAHSRLAFMAVGTNENVHAPFLDRNQEILQKLRVGEFERAHESLASYLQESEARILGEMSIGG >NZ_CP011541.1|WP_047239910.1|920051_921290_-|divalent-metal-cation-transporter MASEKQPTIPQAAAAASTRSALLGAIFLMATSAIGPGFLTQTAVFTAKHGAAFAFAIVVSIIIDIAVQMNVWRVIGLSGMRAQELGNRVIPGFGWLMALLIAIGGIVFNIGNIAGSGLGVNAMFGGDVKIGGVATAAIAIAMFLSKRAGMALDKILVVLGVVMMLLTLYVAFVSNPPVGSALKNAVLPEEVDVLTITTLVGGTVGGYITYAGAHRMLDSGQTGRENVSQVAKSSVTGIILTGLMRVLLFLAVLGVVAAGTQLNLKGNPAAEAFQAAAGDLGMRFFGVVLWAASISSVIGASYTSATFLIPNKPEKRRMQNIVTIVFILISCTLFVVLGTAPATLMVFAGAFNGLVLPLGFTMIMFVAAFRQKDLLDGYKYPLWLIILGVVGVAIAWWLAYISFGGVFKLLGT >NZ_CP011541.1|WP_047239909.1|919211_919970_-|LamB/YcsF-family-protein MSFIDLNCDLGESFGNYTIGNDEAMLDLVSSANIACGFHAGDASVMDTTVAAAVERGVRIGAHVGYRDLAGFGRRAMAYAPEELRAETTYQIGALQAFARKHGSAVQYVKPHGALYNTIAHDEAQAQAVIQGIKDADPNLALMGLAGAPVLEWAANAGLKVLSETFADRAYTAEGTLVPRSQEGAVHHDPEVAAAQAIAFATQSPITSVTGSPIMVHADSICVHGDNPAALALVKQIISELNAREIEVRHAD >NZ_CP011541.1|WP_047239908.1|918565_919222_-|allophanate-hydrolase-subunit-1 MQINPCGEQAILIDITDEDTESSGLDALFTVLRIKEAVSSWQLPGIIDLVPAANTLLIMLDTQRALPKDVAARVAAIDVSQPVGSTNDAHRTIEIPVRYDGPDLAQVAEALGMSAESLVAKHQAAVWTAAFGGFAPGFAYLVADQPLGNAPRLSSPRPNIPAGAVGLAGEFSGIYPQPSPGGWQLIGTTTTKMWDTARTERPAAILPGDTVKFVEVAQ >NZ_CP011541.1|WP_047239907.1|917669_918569_-|biotin-dependent-carboxyltransferase-family-protein MIRVIQTGPQALLQDAGRFGLAGTGVAPSGVFDRMSAVRANHALGNDPFAPVIEILMGSFEFEALNDAHIILTGMGAPFTITRPDGTQRMGYSNEIVDIVAGERVFIKMARTGLRGYLGIRGGFAAFQVLGSCSTDVMSNIGPAPLAPGDEIPTGNAIAEVAWWPALRNLPTLWKETKVHTLSVVPGPRQGWFDEQSQQDFFNQTFTVNAASNRIGVRLDAEIPLRRLDATRELPSEGMVRGSIQVPPDGNPVIFGPDYPVTGGYPVIGVLTRRSSDHSAQLAPGDSIRFTTLSSAPHR >NZ_CP011541.1|WP_047239906.1|916682_917315_-|TetR/AcrR-family-transcriptional-regulator MSSSLREQKRRATLAAIEESATALVEEHGYDTVTVEDICAAAQISRRTFFNYVDSKETAVMGQPPRELTDEAVSEFLQSPHDDLFLAVLQLCFLVLPESATAGSGLSKVVERRKAIKRDHPELAYARLHTFTASHAQIHRAVEDYLARYPEQRRLEIPIEQEAQLVVSVAVQSLQMGYKYWISAGPDANSVEVHSENALSLFRQLFREGR >NZ_CP011541.1|WP_047239905.1|915113_916679_-|MFS-transporter MTTTTDTNPTSPVTGEAPKIPLIVGTLMLAMLMSSLGQMIFSTALPTIVGELGGVNHMSWVITAFLLGQTISLPIFGKLGDQLGRKYLFMGVVALFMAGSLVGGLANSMAVLIFARAMQGVAGGGMMILSQSITAEVVSARERGKYMGIMGSVFGVSSVLGPVLGGWFTDGPGWRWGLWLNVPLGLLTLIGIAIFLKLPKRPRQGTFDYLGATFMASATTCLILLVTWGGNEYAWTSPTILGLIAGTIILGAVFVIVELRAKNPLVPMSYFRNRNFVLTTIASLAIGVFMFGALGYLPTYLQMVHSLTPTNAGLMMIPMMVGLMGTSILTGNLVSRTGKYKRYPIAGLLITAVGMVLLSLLDAHDSLYRVGLDFFVFGVGLGSAMQILTLIVQNSFPITQVGTATGANNFFRQIGGSLGAALVGGLFTSRLTSSLADSIPAALQQMGPAAAPFAENFSSGSGSHRLTPGLVSQLPEVLRSAIQISYNDALTPIFLILMPLAVLSAAVLVFVTETELKETIS >NZ_CP011541.1|WP_083984493.1|913470_915030_-|MFS-transporter MTAEERRTAKWVMTALMVSMLLASLDQMIFSTALPTIVGDLGGVNHMMWVITGYLLAETIMLPIYGKMGDLLGRKGLMVGALVIFLIGSVLGGLAHSMALLILGRAVQGIGGGGLMILSQAIIADVIPARERGRYMGVMGGVFGLSAVLGPLLGGWFTEGPGWRWAFWINIPLGLIAIGITLWTLRIPKKKVPFTWDYLGTIFAIVATTALVLFTTWGGSRYEWTSPTILGLIATAVIGGALLVVVELRAKDPLIPMQFFANRNFALTTAVGLVLGITMFGVLGYLPTYLQMVHGINATEAGYMMIPMMVGMMGFSIWSGQRISAVGTYKMYPIVGMVVTLGSLVLFHTLTPEKTMWEIGIYLFILGSGLGLAMQVLVLIVQNTLPLAVVGSATAVNNYFRQIGSSLGAALVGGLFVGNLEDLMAERLPAAMAQMPPEAAGAMQLDSESVTPHLIQQMPAPIKDVFIGAYNDALTPVFLYVMPLVVLAFVMLFFIKHEPLRTTTTDSVPPTLTEVDQSS >NZ_CP011541.1|WP_047239913.1|925721_926717_-|class-II-fructose-bisphosphatase MSTQEIPDRNLAMELVRVTEAAALASGRWVGRGMKNEGDGAAVDAMRKLINSVNMKGVVVIGEGEKDEAPMLFNGEEVGTGFGAEVDIAVDPVDGTTLMAEGRPNAISVLAASERSSMYDPSAVFYMNKIAVGPEAAGKIDITAPAAHNISAVAKAKGIATSDVTVVVLDRPRHTDLIKEIREAGAKVRLISDGDVAGAVAAAQNSNSVDIMMGIGGTPEGIIAACAMKCMGGEIQGMLAPKDDAEREKAVAAGHDLDRVLLTNDLVASDNCYFVATGVTNGDMLRGVSYRANGATTRSLVMRSKSGTIRYIESVHQLQKLQEYSVVDYTR >NZ_CP011541.1|WP_047239914.1|926973_927495_+|DUF4245-domain-containing-protein MSLLVIAVLMAMSVAFTGMCSFNRGAPENGPVQKVDAQQMMQFEARAMNFPVRLPADPEGWTPNSARRSTVNGKPAPVVGWVTKNGAYLQLVQTDEPLEKALKNVDDNARSAEGTIEVDGQQFKKFTSQERNVRDVWAADLGDVRLIFSGTCSDEEFTQLAHNTLQAQPIPKP >NZ_CP011541.1|WP_047239915.1|927520_927766_-|exodeoxyribonuclease-VII-small-subunit MNQDAFGTGTPGQDAFPAVETLSYEQAREELVEIVKILELGQMGLDESLKYWERGEALAKRCEQHLDGAARRVEEALGSAE >NZ_CP011541.1|WP_047239916.1|927777_929016_-|exodeoxyribonuclease-VII-large-subunit MSASSTPETPWPVREVNEKVKGWVEKLGHIWVEGQLTQVNVKPSWKLSYLTLRDPEAEASVQVTCPTSLITQSSTPLQDGDRVVVYGKPAFYVGRGTFSLWVTDIRHVGVGELLARIEQLRHKLAAEGLFDAERKKPLPILPNTIGLITGRGSAAERDVLSVAQQRWPEVQFRVINTAVQGATAVTEVIAALEELDRDPAVDVIIIARGGGSVEDLLPFSEEALQRAVASATTPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVMAERQLIKELLLRSRAALRGWVERERRGLESVRSRPVLANPFTPIEVRREDIAQAKNTIRRDIQRLIVALQRETASLRAQVSALGPAATLARGYAVVQVLPRDGSEPEVVTSVAQSPPGSQLRIRVADGSITAAAIATKRAD >NZ_CP011541.1|WP_047239917.1|929076_930063_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase MLLGTLVAMEETSQKKILLAAPRGYCAGVDRAVETVERALDKYGAPVYVRKEIVHNRYVVDTLAERGAIFVDETTEVPEGAHLVFSAHGVSPAVHAEAQKLELKTLDATCPLVTKVHNEVKRFARDGYHILLIGHEGHEEVEGTAGEAPDVVHLVDGVEGVEKLEFGPEEKLVWLSQTTLSVDETMEIVHLLKAKFPNLIDPPSDDICYATQNRQVAVKAIAPKCDLVIVVGSQNSSNSKRLVEVALQNGAKASYLVDYANQIDDAWLSGVETVGITSGASVPEILVREVLTHLESFGFHDVEEVVTAAEKIVFSLPRDLRPANRAQR >NZ_CP011541.1|WP_144413446.1|930123_930957_-|hypothetical-protein MSQPSTTRSRARRHHSAPARPGVSTWTASSIIIAALATGMLLSWNAHEISWPYWVCFVVAALSMTIVVELRGLFLTVAQLPLLFGVFTIVTGWLVAQSNISASADSLSKTMLLSALYPLAQYFPQLAATTAGCAVIAYLRYRHGVYQAKVQQQAFIAQRQEQSRADQRNRATTTIVREMSERTRRNRSAERRKTVTVEELVRNAEEKKRMRTARGRSVPPRREPGESVRNMPSIEEVTRKRESSRRPDASRDSALGKSTMPAPQPKRRPSLDDDLYQ >NZ_CP011541.1|WP_047239919.1|931060_932170_-|DNA-recombination-protein-RmuC MNSAALFLLLGLTIGLVLGWTLKSARTLSQDPHQLAALISATVRAEGMENSQRAGTEISNRVSDSLHPLADAVAGLSQQVHQIEIERAATMAQLSAQIQTMGRTSAQLSDKTGKLVTALRAPQVRGRWGEIQLERVVELAGMVQHCDFDTQVSAPGIRPDMVVRLSGGRNIIVDAKVPFVAYLDALETEDPEEHEAHLRRHAHHLRSHVTQLASKEYQRTFSPTPEFVVLFVPADPFLDAALRTDPELLEFAFAKNVVLATPTTLMALLRTVALGWQHDAIGEQAMRIQQLGSELYRRIGTLGEHMEKLRSNLEKSVDSYNSALGTLESRVFVTARKMEEMNIVPPSQPPLPEITFAESHPRHPRDLSH >NZ_CP011541.1|WP_083984375.1|932206_933655_-|AI-2E-family-transporter MPKNFAKPPELLDDERLANSRLPEEASRTFAELEGADHIDRSFIIAEGAKELASWCLRLLLIAAATYMVWFVGKQVWQGLLPIALALIVSSVLWGPTQWLRNLGVPKALAAILVILGTGGVFTGVMMAIAPSIGRQSQTLYLQTFELMQRTQLWLLGPPFHLKDDDLNDLFASAVNWLQAQSGKIAEGLFAGLGAASVFAVTLGVVLVLTFFFLKDGDSFLPWLRSVTGRRAGWHLTELLTRVWITLSGYIRAQAIVSLVDAVVIGGGLVLIGVPMALALATITFFAGFIPIVGAVVAGALAVLIALVSLGVTKALLVLALVIAVQQLEGNILSPLLQSRAMNLHPVIVLISVTIGGSLFGIIGAFLAVPVAATIAVFFRYLNDIIALRSGEKTASEISFATDAGSITGVWSEEFGRKLRDATLPRILPQRHTAVDDEPGTAHPTSTDAKSLTSTDIVGELMDRASNTPKKFARLFQKFPRR >NZ_CP011541.1|WP_047239920.1|933776_934862_+|redox-regulated-ATPase-YchF MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDARLNRLAEIFGSERILPATVSFVDIAGIVKGASQGEGMGNAFLANIREADAICQVVRAFADDDVIHVDGRVDPSTDISVINTELILADLQTIEKALPRLEKEAKKDKALADHVTATKKAQEILEDDRTLFSAAKNGEIDLSLVRDLHLMTAKPFLYVFNSDEAVLTDEARKEELRALVAPADCVFLDAKTETELLELDEEEAAELLESVGQHEPGLHSLAKAGFATLGLQTYLTAGPKESRAWTIKQGWSAPQAAGVIHTDFEKKFIKAEIVSFEDLDALGSIAEAKAQGKMRMEGKDYVMQDGDVCDFKIGG >NZ_CP011541.1|WP_047239921.1|934981_935593_-|hypothetical-protein MRRLSLTALAVISICTLSGCGAPSVLDALPGSKETPAAAAPEASDSAPTSEKKSTSKPATSKSTSAPKSEPSGAATESDSESKSKRTEAAEAADDSADGAYTKEIDPEQQKILKDALVPIIKEYAENPETDTVTGQIRFDKDMKPNNFSKFTVNGKPFGIDGPVRKDAEKALAPLADTPESERFSKLEFKYSNNILEAKVTYR |
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CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NZ_CP011541_3 | 2310018-2310136 | Orphan |
NA
Consensus repeat of NZ_CP011541_3
|
2 spacers
spacers of NZ_CP011541_3
>3.1|2310044|19|NZ_CP011541|CRISPRCasFinder GTGGTGCTGGTTTGAGCGG >3.2|2310089|22|NZ_CP011541|CRISPRCasFinder GTGGGCGTGGCGGGCGTGGCTT |
CRISPR arrays and Neighbor proteins around NZ_CP011541_3
The CRISPR arrays of NZ_CP011541_3 >merge|NZ_CP011541|3|2310018-2310136|CRISPRCasFinder TGATGGTGCAGGCTCCGGTGGGCGTGGTGGTGCTGGTTTGAGCGGTGGTGGGCGTGGCGGGCGTGGCTTTGGTGGGCGTGGCGGGCGTGGCTTTGGCGGGCGTGGCTTTGGCGGGCGTG >NZ_CP011541|3|2|2310018-2310136|CRISPRCasFinder TGATGGTGCAGGCTCCGGTGGGCGTG GTGGTGCTGGTTTGAGCGG TGGTGGGCGTGGCGGGCGTGGCTTTG GTGGGCGTGGCGGGCGTGGCTT TGGCGGGCGTGGCTTTGGCGGGCGTG
>NZ_CP011541.1|WP_047241528.1|2309378_2310008_+|peptide-deformylase MTVRPIVIHGDPVLHHPTEPVTESPAELAELIDDMYETMDVAHGVGLAANQVGVGKRLFVYNCPDVEGPDGALKTEEEIEAQGGEYRRGCVINPVLETSEIPQTMPRVDGSDDEGCLSVPGKSFPTGRADWARVTGTDEHGNPVTVEGYGFFARCLQHEVGHLDGFLYTDVLMGRWKRAAKKHIKAEGWLTGGQTWLPGVDADPFGHDD >NZ_CP011541.1|WP_047240928.1|2309131_2309395_-|DUF3263-domain-containing-protein MGRTVIVLKHIRFRAMELTDLDRDLLRFEQSAPRNIGLKEERIRRELGMSPLRYYHRLNLLIDAPAAASEFPQLTARLRRLRQQRAD >NZ_CP011541.1|WP_047240927.1|2308476_2309091_-|LytR-C-terminal-domain-containing-protein MNESPQAPEPSRIPIRGIAMILLAVAVLLLAWGVYSMTNSSGDNVVTKPKSVQTQQATGTPAPANQAPVNPAQTGQAPVTPAPATPATSNQAQASANPAVPAAGNDVDPTAVKIHALNNSTVQGLANRVADTLKKQGFSQVESGNFPNEVLPNSVVFYTPGNAAEQKAAEAIAYNLGIKAQPRNDSVKDTPAGVVLVITEELNR >NZ_CP011541.1|WP_047240926.1|2307336_2308467_-|glutamate--cysteine-ligase MALTYNGTDNHTLGVEWEVALVDPASRNLVPLAEEVIDKATQQSLPVRLERELLRNTVEIVTGVCTTAREAVGQISAGLSAVRQAAEDLGANVWAAGSHPFAVSEESDISDKEHYNEIIERTQYWGHQMLIWGVHIHVGIIERDRVWPIINALMTKFPHLLALSASSPGWLGKDTGYASNRTMLYQQLPTAGIPYEFEDWDHWSSYIEDQRKSGVISEESAMHFDIRPNEKYGTIELRISDAPSNLRELSALVALTHCLVVYYDHKLDRGEELPSLPHWHNTENKWRAARYGMDAIIITTRDTDEVLLRDELPVLLAELAPIAEELDCVDEIELVNEIMRSGAAYQRQRRTYEDTGSWEKVVDQTCAELATMRPPR >NZ_CP011541.1|WP_047240925.1|2306992_2307340_+|monovalent-cation/H(+)-antiporter-subunit-G MSLLCDIISITCIFAGAFLVLATAIGMARFRDTVSRLHSVTKPQTLGLILTVIGAIVRILGRGDLTPGNKGDLGTLVLVILFALCTAPVVGQRIGRIARREQLYDATQLARNDRS >NZ_CP011541.1|WP_047240924.1|2306720_2306996_+|cation:proton-antiporter MNPALYELLLQVATIIFAVAFLINGYRLLAGPNSLDRLLSLDATVAMIQCALAVYICWSLDTTVAYAMLVVALLGFIGSVSVTKFRKADDA >NZ_CP011541.1|WP_047241527.1|2306205_2306724_+|Na+/H+-antiporter-subunit-E MLPGLRRRLHPWSVVWIVFMWNVLSGEFSWGNTIAGFLVAVVVILGLPLPQLPVSALRIRWLPLLQLVVIFAWDLLVSSLRVSWLAIRPQPQPPSAIVTVPMRVQEDLVFAFAVALLNLTPGGTVTDLDIANRMLTMHILDARSTAVLDKTIASIATLERLLIRIFETEVKA >NZ_CP011541.1|WP_047240923.1|2304502_2306206_+|Na+/H+-antiporter-subunit-D MINSLIDSAVPALPYLVALPVILPAVATALALLNGSRPRVQRSIALVSLFALIVLCVVLVVVVDRNGIHTLQVGGWDSPIGITLVADRLAAVMLAVSSLVLFCVMWFAIGQGMRDGTEEEPVAVFLPAYLLLTMGVNMAFLAGDLFNLYVGFEVLLVASYVLLTVGASPGRVRAGVSYVMVSMLSSVIFLLALALVYASVGTLNMAHISVRMAEVPSGTRTAIFAVLLVAFGIKAAVFPLYSWLPDSYPTAPSLVTAVFAGLLTKVGVYSIIRARTILFIDGRLDTLLMWAAALTMILGILGAMAQNDIKRLLSFTLVSHIGYMIMGISFYSIQGMSGAIFYAVHHILVQTALFLVVALIERQAGSTSLRRLGSLAYVSPVLAALYLVPAFNLGGIPPFSGFLGKVVLIEAAADHGGFMAWLLVGAAVVTSLLTLYTMAIVWSKAFWRDRADAPDGHLANSRPTPLTDISDSVLLSERDDVGRMPLGMVAPTALLVMASLAVTLLAGPLSAVTTRSAESITNVEIYREAVLGVGYQAEVHEPGRSETLNPASGELSRDHADMIGEGQ >NZ_CP011541.1|WP_047240922.1|2304018_2304510_+|Na(+)/H(+)-antiporter-subunit-C MVANLFLLLTSAVLISAGVYLLLERAMTKMLMGLLLMGNGTNLLILTAGGGAGAPPIQGRDSAVVAQDADPLSQAMILTAIVISMAMTAFILALAFRQYRYRTADFLQDDTEDTAVAKRPPTAIAAPDHDASDDPATGRPTSSGDTFGPRSFEQPVQEGNSDD >NZ_CP011541.1|WP_047240921.1|2301134_2304029_+|Na+/H+-antiporter-subunit-A MLTLLTALTTATVLAPLLIHKLGRPAFGLLAMVPAGGFVWVASLFARGKLDSGAAPIAYEQGWMPNAHLNIEFLLDPLAGIFSLIILGMGSLVLLYCWGYFSEVPKRLSAFGAEMIAFCTAMFGLVISDNFLLMFIFWEITSVLSFLLVGYYSERASSRRSAGQALMVTTLGGLTMLVGIVILGYGAQTWTFSNLGEISKLPYVGVAVVLILVGALSKSAIAPMHFWLPGAMAAPTPVSAYLHSAAMVKAGIYLVARLAPTAALVSSWHLTVIPLGVFTMLLGGWMALRQKDLKLILAYGTVSQLGFIIAVVGIGSPAALQAGLALTCAHAMFKATLFMLVGAIDHAAGTRDKTKLSGLGRKQPGLAVLALVSAGSMAGIPPLFGFVAKETALTAVWKEEMLIGMPSKMMLAALVAGSILTMAYSLYFLHSAFATKPGGISVAVREMHPVSLWLWLPPTILTGCTVLFGLFPALIDAPINTHISAQFSHPHVSHLALWHGFTLPLLLSAVIIVVGSVLHWQRRLLSKLYFEKPALGSADAAYDRVLETLRTISLRMTASTQRGSLPINEAVILGTLVLVPLISLITGERTAVRMQLWDSPVQGFIGVLVIVAALAATVLDNRISALIMVGMTGYGIATIFALYGAPDLALTQLLVETISVVVFMLVLRKLPPTTDPKQAGGFKRLRAWLSVAVGVTVVVVATFAMNARRSQPISLHIPQLAKDIGHGANAVNVLLVDIRAWDTFGEISVLVVVATGVASLVYRTRDFQRASRRPTLQSEGGRWLATSTNDRARNRSLLVDVVTRLLFPSMMALSCYFFFAGHNGPGGGFAGGLVAALALTLRYLAAGREELEETLPVDPSKLLGTGLALAALPTFLPLFFHAPPLTSTYREFHLPLIGDLAVVSPLLFDAGVYLIVLGLILQILHSLGSQLDRDEEIRKQRARDRVRRMRRKQQAAKEATTYGR >NZ_CP011541.1|WP_047241529.1|2310174_2311119_+|GNAT-family-N-acetyltransferase MVRRRLPDTPGHLTDVIGHVVSLDPLVVRPQSVGGFVSDAETVEIPAELIQVVKVLPPRRVRNSEIRAVEIATAAAFPGIEHVEIDGWLLRAGDGITERSNSAAPLGASAGFSPVPIAAIQDFYQRHGLPPSILVPDRIAPTALQFARASGWSFGPEIVVMTRSLQPAPSFSPPAGFHFEVLDAPTPDWLDLYHFRGQPLPEHALRLLQQEIEGHLGFGAIRSDSGEIVAITRATITAGGDEQYLGYSAVEVAAAYRRRGLASALGAAMLSWGAQMGATQAYLQVVATNEAGLGLYDKLGFTEHHRHRYAHSPQ >NZ_CP011541.1|WP_047240929.1|2311144_2311735_-|RDD-family-protein MSSPQPQRPAHAEPRPVHKVGRKLRSELNDALQPPIQYGEMETYQAFLPGRNTGLRSVDNAPVVRRIGALAIDLAIYLGSMLTIIVAFSIALGQPWLLALILALPLGFFLSQSVFDATGGTIGKRTMGLRVVGPAHTPVDFGQAAKRNAWLLLPLIPVAGPVAAVGVGLWFSGVAKADAFGVAPHDRHARTRVVQR >NZ_CP011541.1|WP_047240930.1|2311945_2313079_+|HNH-endonuclease MIQAAKDLLKQALIDGPLFHDFACLLEIKELVGRLETEMARDHERFELEEEGASARTARIIKRRADHEWDDAVSVEHQDAILSALERLTNTSDRRSGIYRLGATAAAESSVKQTHEYVKKLVREENERLAKDPFEAHHQRRFTLRSQDEHGGCSFFGYAPAKTAALLKAMLDRAFHAEKDEDTPHRTVAQRNLDAFHQVLKWASSDRVVATGHASLVISVTDADNFDWRTKFGTNVGIDLNIFDIANLAGDRISDYIAVHDHNGAIISLSTGERCANFYQRVALLARDFVCQHPGCGEPVSRCDSHHVIPWSRGGPTSIDNLALLCPKHHRRNDDSHQKQHLEMHDGIPIWFNNQRIPKRNNSPGAKRAGGRRSKPT >NZ_CP011541.1|WP_047240931.1|2313112_2313931_+|exodeoxyribonuclease-III MRIATWNINSVRTRIDRVTDFLARHDIDVLALQETKVSDDKFPHQAFTNAGYEVAYHGLNQWNGVAIASRVGLEDVEKHFPQQPGFDKDLTKPQAREARAIGATCDGVRIWSLYVPNGREIADPHYDYKLRWLDTLANEVENTLAHQPEKQLLLLGDFNIAPLDEDVWDISFFDGKTHVTEPERAAFDSLLEAGLTDVTRNLIPTGYTYWDYTAMRFQRGQGMRIDFHLASRTLATGAQRGWIDTEERATKGASDHAPVIVDYHTARLDDVR >NZ_CP011541.1|WP_047240932.1|2313936_2315433_+|cardiolipin-synthase MLDFLALPDPAWLQTTFLILDYAIKIIAVGTVPEGRKPAASSAWLLAILVIPLVGLPLFLLMGSPYINRRRHRIQQEADTHIRDVQREAPDFPDHWTLTPELESIIKLNRRLTRLPAVTGHSKGFYTNYHEAIAAMTAAVDRAEHSVHVEIYIVSWDTTTEPFFRALERAVQRGVKVRLLFDHVGSWKYPGYWTLGRKLTRIGVEWHVMLPLQPWKWRFRRPDLRNHRKMLLIDGHTGFIGSQNLIDSSYLLRGNRRRGLNWVDLMVELTGPVVSSMEMIFATDWFAETNEALTTEDIMAGPPVPLNRGSSTNVLQLVPSGPGYTTEPNLRLFNSLAHHAKERLVLCSPYFIPDETLLESVTTACYRGVRVELYVNESSDQFIVSHAQSSYYRALLEAGVHIYRYPAPAILHSKYMLADPDTDNAVGVLGSSNMDMRSFGLNYEVSLLVAHGDLIEQLAELTTRYQERSTQLTLEQWSKRNIVLRYIDNVMRLTSGLQ >NZ_CP011541.1|WP_047240933.1|2315404_2316604_-|multidrug-effflux-MFS-transporter MASAEKPRQTLTWPLLAGLALLSAGGPFGTDLYLPGLPRIAADLGTSDAAVQLTLSSFMLGMAAGQVFIGPLSDSLGRHKLLVISAVLAVVSSAACALAPNIAVLIGARAALGLGMGACVVLSRASVADLAEGKMAAKAFSLLMMIMGVAPILAPVVGSVLVEPIGWRGLFWVLTGVAAAQLAVAVLLVRESLPVSARSQSGLAQLGRNFRTALGNRAFLGYTLAFGAGFGTMFSYIAASAYLFQTELGLSPLQYGLCFGMNAAGITIASFLNARLVEKTDPHAILRRALLGMLLCAVALLIDALVGPHLFVVIPVLFVAVSQIGFVMGNATALGTSQVRRIAGTGSAVMGAAQFLTASLVSPLVVLGSNTALSMALGMVVCASLANFGAAIGGRKSVA >NZ_CP011541.1|WP_047240934.1|2316725_2317952_+|Na/Pi-cotransporter-family-protein MSTPLNTRPSFPGTIHYINPKVIPESEDEVLISSFNKLVRWIVVCLAIYVAIVGINLIMDGIAGLGFANLSALMEKAQNPLLCLMVGILATFLVQSSTAFTTVTVAAVGGGLLPLEAATALIMGANIGTCFTALLVAFGYVSRQDELPRALAAGLTHWTFNVLSVAILLPLELAFHPLTNTARWLSTTLFGESSPTFSSGTLVAWSTGPLVDAFGTHTIARVIDSPVVVAILAGLIGIAFIAIAVQILTVQLRSLMAFPSQVLLKRSVSPSKSMGAEFGVGLGLTLLTHSSSATTCATVPFAGAGTLSTRSALGVILGANLGTTFTAVAAAFAIPGDLGTMALQTAFVHVLINLIGAIVVLALRPAADFIIWISEVLARKTAKRRALGLLLWLATYLAVPAAFILWLN >NZ_CP011541.1|WP_047240935.1|2317948_2318731_-|ABC-transporter-permease MFLNSLKAEWTKLSTTKGLWWNLVCYFVLVLGFLALNIYAYNDAQKNLVSEGLPKMPADTGMVGEMVAQGGGLILIIVAILAVTTEYGHKYAAMTFQAVPNRLGVALAKLLLMAVIAVVLSLIAIGLGVLGYRVFSGAEATANFNFSNDAFTRMLWVVPLYTVLLVLLAQAVAWIVRNSAGSIVIMLVWYMVLEIMVIPMLPKVGEKIHPYGPLSNLGAFFRDKDLTGTPWDTTGSLFYFLAWAVGLFVVGMVLLRRRDA >NZ_CP011541.1|WP_047240936.1|2318730_2319675_-|ABC-transporter-ATP-binding-protein MIEVSGLTKHYGAVRAVEDLSFSVQPGIVTGFLGPNGAGKSTTMRMILGLDQPTAGSALIDGKKYSELKNPLREVGALLDAKALHPARSARNHLKWIAQSNGIPTSRVDEVLGLVGLADVAKKRAGGFSLGMGQRLGLAMALLGDPHTLILDEPVNGLDPEGIRWVRDFLKALAAEGRSILVSSHLLSEMAMTADHLVVIGRGQLVADTPTYDFVKNNSHTSVVVRTGHLAEFQKVLQEEQISFEMETDAEQRPVLVISDSTTDHIGALAYSTGVMLYELSERRASLEDAFLQMTGHAVQYHAAVPAASNQEGN >NZ_CP011541.1|WP_047240937.1|2319700_2320195_-|NUDIX-domain-containing-protein MFGDGDGWAAGPQGTRMWGLHGAAGLFLVAGDKLLLQHRAHWTANGGTWGLPGGARDSHETAAEAALREAEEETGIKPSQVTVLAELCTSGPFPGDPLRPELAAGWTYTTVLARADKELATTANNESLELRWVDFGALTSMNLIPPLAENLDLLCREIGRRKAC |
You can click texts colored in the table to view more detailed information
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NZ_CP011541_4 | 2402375-2402672 | Orphan |
NA
Consensus repeat of NZ_CP011541_4
|
5 spacers
spacers of NZ_CP011541_4
>4.1|2402400|20|NZ_CP011541|CRISPRCasFinder TGCAGCAGCGCCACCCGTTG >4.2|2402445|20|NZ_CP011541|CRISPRCasFinder CGCGACTAAGCCACCTGTCG >4.3|2402490|20|NZ_CP011541|CRISPRCasFinder GGTTGCAACACCGCCAGCAG >4.4|2402535|53|NZ_CP011541|CRISPRCasFinder AAGCAAAGCGCCATCCGCCTCGCCGGTTCCGAAGGTGCCGTCACCTCCGGCAG >4.5|2402613|35|NZ_CP011541|CRISPRCasFinder AGTTGCAGCGCCACCGGCAGCTAAACCTCCAACAG |
CRISPR arrays and Neighbor proteins around NZ_CP011541_4
The CRISPR arrays of NZ_CP011541_4 >merge|NZ_CP011541|4|2402375-2402672|CRISPRCasFinder CTTCCCCGCCGGTCGCGACCCCTCCTGCAGCAGCGCCACCCGTTGCCAAACCACCCATAGCTGCACCACCCGCGACTAAGCCACCTGTCGCGACACCACCGGTTGCAGCGCCACCGGTTGCAACACCGCCAGCAGCTAAGCCACCTGTCGCGGCACCACCAAGCAAAGCGCCATCCGCCTCGCCGGTTCCGAAGGTGCCGTCACCTCCGGCAGCTGCGCCTCCGGTCGCTCAGCCACCAGTTGCAGCGCCACCGGCAGCTAAACCTCCAACAGCAGCGCCACCCGTTGCGAAGCCCCC >NZ_CP011541|4|3|2402375-2402672|CRISPRCasFinder CTTCCCCGCCGGTCGCGACCCCTCC TGCAGCAGCGCCACCCGTTG CCAAACCACCCATAGCTGCACCACC CGCGACTAAGCCACCTGTCG CGACACCACCGGTTGCAGCGCCACC GGTTGCAACACCGCCAGCAG CTAAGCCACCTGTCGCGGCACCACC AAGCAAAGCGCCATCCGCCTCGCCGGTTCCGAAGGTGCCGTCACCTCCGGCAG CTGCGCCTCCGGTCGCTCAGCCACC AGTTGCAGCGCCACCGGCAGCTAAACCTCCAACAG CAGCGCCACCCGTTGCGAAGCCCCC
>NZ_CP011541.1|WP_047240996.1|2398459_2399911_+|hypothetical-protein MSRVRRLAAWATAASLACCASPVISTPMVPAFAASSTTQSSANNANIAGQVKQILSATNPSTIIRSGHQDMALIGNSDSPQVLMRNDDDQQEYSSGSFAYAVADSALIPDPLDIPELHSSTDGQVWLLPQTQDENLPWQGFSTESFDYGSLGAEGVRVRISEFAGPGQMLSAHQNLGSLTVNLDSSDPSSSLHYPATAHDHMNFFFTAPGAYRVTYRFSATGISGASLEQDLVAYYLVGDEAIVAAADVMAAGGATHSDPGAERIGLLLGGGMLAWKVAQLLGNHSEPKPENPKVESPAGKMKATAETPSASGSPSRVQVQQDSKPVAGSDPAEATQPAGGAPGAPTAGPRSSGAQQAAGAKPAQGTTAGKTQAEGQKKAVKGASTSTPKPAPKGSIPDATTQPLAAVAPQPEPARASSDVAPASLTEQLTAGGWLAGFVLGIGVMALLGGLGLFIATAVTLRRFPRPADESVSDDPAADEVS >NZ_CP011541.1|WP_047240995.1|2397569_2398457_+|anchored-repeat-type-ABC-transporter-permease-subunit MITLHQFFLDLTNPALAFLPKALLISVLSSFVCAVVGTHVVLRGMAFIGDAVAHAVFPGIAIAFALGGSVLLGGAVAGTAIALLIAVFSQRRRVKEDTLIGIFYAAAFALGLVIISRIDGYTASLTSFLFGSITGVPDSDLLLVFGVGSLVVAILLLLGKELVTVALDRESARAQGLPVFLLDIVMYVAVTAAVVISVRTIGNILVLALLITPPATARLFTDRLDRMMLLSALFGCLGSVGGVYFSWAWNFPTGATIVLTTTAMFLFSWLISPKVGVLRMPSRRPHASTSALEGN >NZ_CP011541.1|WP_047240994.1|2396820_2397573_+|anchored-repeat-type-ABC-transporter-ATP-binding-subunit MTVATTLEISDLHVSLAGRPVLDQLSLRVEPGEFLGLIGPNGAGKTTLFRSILGLIRPVAGQITVAGTRVDKARGALGYVPQRHDFAWDFPISVHDTVLTGRTRSIGWLRRPKLADFEAVATALDLVRLTELADRPIGELSGGQRQRVLVARALTTDPSLLLLDEPFTGLDIPSTELLLDLFAQLAAQGVSIIMSTHNLAEAMEVCNRVVLLNGRIVADGPPEQLRDPALWQKVFGVSATSPLLKVVGAA >NZ_CP011541.1|WP_047241538.1|2395909_2396824_+|hypothetical-protein MLTTSLFTTGPAVAQAPLTDPKLAQVVTAGESIASLGTPAVLDHGHADLGPVKTDNNLDFLVRDDSAETPTWRHLEDVVFQVHDRAQLALPEGKEFNFTGARPGDPVWVVPQTEAQGVVWLGWNTQHPSITTAADRGVTLEFLGAQGPGKFSLFLQAGGFAQPQVLWNSENPNVQQMWAELNTHTHANWVFTQPGVYQVAVRARVKQLDGSASESTKILKFAVGDGTSTAEAATAQWAGTPPEQRTTADQTSQEKPAQQSNRVLVPIAVGLGVLAVVLIGASVWLRRSAQSRRQQATRRVSGAK >NZ_CP011541.1|WP_047240993.1|2394317_2395826_+|anchored-repeat-ABC-transporter,-substrate-binding-protein MTISLRQLGSAVLLSAFASWSLGGCSTSAVPQRDDSTLDVVTTTPIIYDLAKNVAGDRARVTSLLPLGADPHSYEPTLRDVRNVANADLAFTNGLLLEQQSLLRTVESSVRPGTEIVPLAEEANRYGGNVIPLVEDVTLDSIWLGLRVLGDGTNLGATRASEVRLSVTGVRGPGTMTGFVTSTFGTPELFFNSADGFGDDSTTLPVDAHTHMSWSFSEAGQYELDVQATLDGTHPIAEETIVFAVGTPVEDSTLKVLDHGHEDITVDLNRASISVHGDAGDSDPHRTVISVPNHAVQQIPPTPEFRFLGRPGTEVFLLPQAVLGKHVHGELDPHLWHNVANAIAYVKIIRDELSTIDPAGASEYRANADRYLAQLADLDSYVAQQIASIPKQKRQLVTTHDGYRYLGAAYQLNIAGFVTPNPAVEASTRDLIALTHTLENLQVPAVFLEPQLARRATTLSETAGRLNIAVCRIYGDAFDPEVQTYLDLMRFNADSLRRCLGT >NZ_CP011541.1|WP_052843547.1|2392741_2394304_+|LPXTG-cell-wall-anchor-domain-containing-protein MLLHRARTHGALLTILLILCAWAWIPPVAHAQQLTLNDGHVDAFHVTVEGGELSLNLQEDVTGSHVQHAAEDVVLGVSDQAYTDATTQVPEIGAPTYFLPQTQQQGILWPGWDTQEVRNGGYSTVQLHFLSVSGPGSVYVFEQSGLGGTSAVTDDGELTLATGSVITQEMPAHRHANWAFSAPGTYRMQVQATADGAASNTATYTWVVGEGTVAEDADASAPDVTPAAPGAGPAGTTDETSDPVSGSTGSSSGTTRYAANAQSGAPATQSKECTKLIPRIKDDRQSPASWIDPASISFALTDAARTSLPQALGPIPAGDAYMIGATQVSGVPWLGVNTMHPSLLKHTTGDVTWEITGFDGPGSLYVFTQGSLGQVIGEEWFRGQGGVAEGTTVVKRNSHVHPNWVFSGPGTYHVQLTQSSQLSDGTPVSGTATLTFEVGTGAGDANDGHFDFGSEIAQGACGEVANPGGAGTRTVAAKSQGGKLPNTGSSVLTLPIAILGLGVLSLGAGLIFTARKARWI >NZ_CP011541.1|WP_083984530.1|2391245_2392637_+|AI-2E-family-transporter MVVLMNTNNTPNQTGDQQRYSSLTDIIENDTTASPAPPRATSQSTSHDSEGSPDRAIILGQDGRWLAGWALRFIVLTIAAFIAWKGLGKLWTGLLPLLLALLLSTVLWPPVKWLRDHKFPKTLAVLTVLLGSIAAITGIFAAMAPSIAGQSKELFQKASEGITKLETWVQGPPLNIKVDQISSTLDKFVAKLQEQAGQITSGVLEGVSTASSVAVTLAIMLVLTFFFLKDGENFLPWVRRSTGPKAGWHLTEVLTRTWNTLAGYIRAQAIVSLIDAVIIGLGLVILGVPLAFVLAILTFFAGFIPIVGAVTAGALAVLVALVSNGLTTAIIVLVLVVAVQQLEGNVLSPMLQSKAMDLHPAIVLLSVTVGSSLFGIVGAFLAVPIAASIAVWLRYHSDLVSLRSGELTADEIKIETASAAGSTATASDAFEALRASFLSLGRRKTSHDAAPADTLAVKAEKEN >NZ_CP011541.1|WP_047240991.1|2389092_2390928_-|molecular-chaperone-DnaK MGRAVGIDLGTTNSVVSVLEGGEPVVIANSEGSRTTPSVVAFAKNGEVLVGQSAKNQAVTNVDRTIRSVKRHIGTDWTVDIDGKKYTPQEISARTLMKLKRDAEAYLGEEVTDAVITVPAYFEDSQRQATKEAGQIAGLNVLRIVNEPTAAALAYGLEKGDKEQTILVFDLGGGTFDVSLLEIGDGVVEVRATSGDNELGGDDWDQRIVDWLVEKFKAANGIDLTKDKMALQRLREAAEKAKIELSSSQSANINLPYITVDADKNPLFLDETLSRTEFQKITQDLLDRTKAPFNQVIKDAELSISEIDHVVLVGGSTRMPAVTDLVKELTGGREPNKGVNPDEVVAVGAALQAGVLRGEVKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTAEDNQPSVQIQVFQGEREMASANKLLGSFELGGIAPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQDGSGLSQEEIDRMIKDAEAHAEEDKKRREEQEVRNSAESMAYQTRKFMEENSDKVSDELKNKVEEAAKGVDEALKGDDIEAIKSAVEKLNTESQEMGKAIYEAQAAEAGAEGAANATADDTVVDAEVIDEEEEKK >NZ_CP011541.1|WP_047240990.1|2388460_2389093_-|nucleotide-exchange-factor-GrpE MTEPNRDMPENPGDPDATDTEGTTPEAAEAEAAAAEEAQAEADLEAEVNEALADVDLDSDDTVTDAEAELAERTEDLLRVTAEYANYRRRTERDRTTTIATTKANVLEKFIAILDDLELAEQHGDLAEGPLKAFADKFRNTITGLGLEAYGEEGDAFDPERHEAVQDLSEGDEKVIGTVLRKGYSVGDRLVRNAMVIIADPANPEAQSAE >NZ_CP011541.1|WP_047240989.1|2387910_2388288_-|hypothetical-protein MAQYIISVFHDPGVHAAGAYESPAQQAEAITRVEMFNKKLMEKDAFVFACGLTPPEDARRVEKVVSEHDGAVVTAYSVADGPVGSGPFVGGFWVIEAPDHEAAEDLARAASEACGQGVELRRLQG >NZ_CP011541.1|WP_158408049.1|2402938_2403079_+|hypothetical-protein MNFNIVELVSIVGSAALLLAGPALVILVIWNVIKGYRSRDDAQRRQ >NZ_CP011541.1|WP_047240998.1|2403104_2403713_-|GNAT-family-N-acetyltransferase MITQQDLYPPFALRMRCAGLELNVINDDDLLEIAAISAAEIFVDPTCSWVFDWATVPAPQRYRSTAAFHWSMRASHTPEKWTLPFVVRRGAEIVGKIDLRKTGPTTGDTGSFVLAQHQGKGYATLMRHAVVTLAFTELTMTTATTDWHPDNLASARVSEKLGYKDRSLLIDDYLASPRPDVEISGISPLLLNFLGVEGLGAT >NZ_CP011541.1|WP_061363645.1|2403808_2405080_+|pyridoxal-phosphate-dependent-aminotransferase MGKMNTADSPQQPVVKRAPRVFDQSDKLKGVLYEIRGPVSAEAERLENDGHRILRLNTGNPAIFGFDAPDVIVQDMVAALPTSQGYSTSKGIIPARRAIVTRYELVDGFPEFDIEDVYLGNGVSELISMVTQALLNDGDEVLIPMPDYPLWTAATSLAGGKPVHYLCDEADDWNPSIEDIRAKVTDKTKAIVVINPNNPTGAVYSKETLEKIVQVAREYELLILADEIYDRILYDDAEHISIASLCPDLLCITFNGLSKAYRVAGYRAGWMVITGPKHHAEGFIEGIELLSGTRLCANVPAQHAIQVALGGRQSIYGLTGEGGRLLKQRNAAYDALNEIPGVSCVKPMGALYAFPKIDLDMYPIHDDAKFMFDLLRAEKILLVHGTGFNWDKPDHFRVVTLPHATELTEAIGRLGRFLQHYKQ >NZ_CP011541.1|WP_047241000.1|2405164_2406385_+|YibE/F-family-protein MARHALPAQRRPSRSASFTIPQWALLVFLILAALATLAGLIGQWPGKQAPRISPDFAATSGVATPLVSGEVTEREEGLCDSPSIGTAFDGAPKTTVNFENRTCPRAIVRLESGPNADKNTLIMLGTQPGDPTLKTGEKIWLTETAANGTYTYSFADVHRTSTLTWWLIAVTVLIVAVGMHRGVLSLVGLGTTMAMVGFFLLPALLRGGSPIGLAVTGGAAVLFLVLFLVHGISWKTASALGGTLIALGLAAVLARFAIHGASLRGLGHEDNLHIQLYLPDVSVTGLMLCGFIIGALGVLNDVTVAQASTVQELVHADASAPAWSIFTSAMRVGRDHIASMVYTLVLSYTGAALPSLLLLSVSGRPLGQMLTGDIMATEFLRSAVGAMALVLAVPITTAVAAVTVRK >NZ_CP011541.1|WP_047241001.1|2406443_2407766_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein MRMTVIGTGYLGATHAACMAELGHDVLGVDVDDKKIESLKNSTVPFYEPGLPEVLQRNIEAGRLDFTTNYDEAAAFANVHFLGVGTPQQRGSYAADLKYVHAVIEDLVPKLKGKHVIFGKSTVPVGTAAELQKKANQLAPEGTEVEIAWNPEFLREGYAVQDTITPDRIVLGTRAEDSQAEELAREIYATPLSTGTPFIVTDLQTAELVKVSANAFLATKISFINAVSEVCELVGADVVKLADAIGHDDRIGRKFLGAGLGFGGGCLPKDIRAFMARAGELGADQALTFLREVDAINMRRRDRMVLLAREACGGNLLGHNVTVLGAAFKPNSDDVRDSPALSVAGSLSLAGAQVTVYDPQGMENARRVFPTLNYATSTDDALRGADVVVLATEWQEFKELDPVHAATLVRSKKILDGRNVLPVEKWQEAGWEIQALGRSL >NZ_CP011541.1|WP_047241539.1|2407809_2408373_-|dCTP-deaminase MLLSDRDIRAAIDEGHLGIEPFDPEMIQPSSIDVRMDRFFRVFNNSKYTHIDPKLQQDELTNEIEVQEDEPFVLHPGEFVLAATFEKFTLPADLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKVGQLALFKMSSPAETPYGTGKLGSKYQGQRGPTPSKAYLNFR >NZ_CP011541.1|WP_052843548.1|2408661_2409402_-|TatD-family-hydrolase MLLDTHFHLDFLPADQRASVLSLPGISVVPQTVLPSTFGEVATYDRASLGFHPWWVGEDHEVELARFATHLPSTTFIGEIGLDFAPRHQGTAELQVAVLTHILELLRADGRDFVMSIHAVRAASTVLDLLEQAEMPGTPVFHWFSGSSDELTRLIDLGGYISINPRMLETKRGRAYARQVPAARLLLETDLPAQTSTADGDVGQQVADAVTRALAETLGTLVELRDDEVRDQIEMNQRRLYGDPAS >NZ_CP011541.1|WP_047241003.1|2409401_2410181_-|tRNA-threonylcarbamoyladenosine-dehydratase MTQPHQRHARLRLLLGDDGLQNLGNATVMVIGLGGVGSACAEALARGGVGTLIVLDRDVVEESNINRQAIAFTSTLGMKKADVMSAMIHEINPDCTIHAQQVFLTPDNVAERLEKFPRPDYVLDCIDTISQKLAIAHWCASQGLPLLSSMGAGNRLDPAHLQFANLRKTQICPLAKVMRIETRKRRIKGIEVLYSTEVPRKLGAGREKSASLGSMSYMPPIMGQMIAGKVIRRLAGLEPMPRPPRLFRTREEALALEQS >NZ_CP011541.1|WP_047241004.1|2410495_2412976_+|bifunctional-GNAT-family-N-acetyltransferase/acetate--CoA-ligase-family-protein MKPELRWEADVILNDGGIATLRPVQPTDRDALIEFYSRVSDKSKYLRFFTTHPELTAQDLTEWVEVDQRDQVTLVLIEREDIVATARYALVSGHEQRTADVSFLVQDDHHGRGIANILLEHLAQIGRENDVKRFFAEMLTQNRSMVQTFIRAGYSVKPELEDGYITVDFPIDPTDISREVMERRELRAEATSIRRLLNPAQDTDLVIATYNPDTFDEVLDQAAQQGARGIISLADGHNPALTAQDLRDFVAQAREHGLRALGPASLGIINTRGGLNTTPAPMPRTGNVGLFTQSAGISTLALSHAIERGVGISTFISAGAFADVTGNDVIQFWADDPDTNICLLSLDTVGNPRKFFRVLRRLALEKQVVVFIPSRALKSARYLDDPGISTLNNADPSALDAVIRSSGAMVVTRRDTMFDLAQLLARQPVPAGRRVAVISNSAGLSEQMAQSAQRFGLNPRAITVTGDPVSGLLEVTTAALADDSIDAVLSGLVEISTAGQVAAAHRGLSELATTTVHKPLIGTFVGFGDLPEDDADTEHLGQLPVFGNYADALEALSLIVSNEEARAAARPQPEDEVGSGRRSAAREFVASLLSSSPAGRELSDVETAHVLRLYGINLIPWQPVSTLAEAIVAAEEYGWDVVLKNVHPALRGRPELSAVVRHIGDSAELATAWNTLERMSADLGLDAFSPVVQPTVPPGTTLTIRAIEDPVLGPISSVGIAGPISELLKDKSYGVPPLRRRDAHRMLTSLAASELLRGHRGTPPALLEPAEYVIMQVNALKDDVPALVEIELTPVIVGAMDTAVVGARMRIADIDTERDPLARRLR >NZ_CP011541.1|WP_047241005.1|2412986_2414129_+|acetoin-dehydrogenase MKPLLVHHEDLFGYCLGDTHPMGPDRVRLTMCLAEHFGLLNLFDIEQPAALTPGTLEKVHTPAYLAALFDGQAHPEHGIGTEDNPLNLAIPPVALQIVAATVHATRAVWNGDRQRAVNVAGGLHHAQADAMHGFCMLNDAAVAIAWLLENGAQRVAYLDLDAHHGDGVEQLFWDDPRVLTVSAHESGLYLFPGTGFAHDIGGPSAAGTAVNIALDRGTADLAWLRTIHGIIPPILERFRPEILITQHGADPHRTDPLADLDLSLDALALAYRSVRSWAERYAQGRWVALGGGGYERDTAARVWTALLGAVADVEFAPTWAMPTHWRALVRGKASRTFGDPGAAEGLRDFHPEARVEARREAPMIATSRAVFPYWGLPPYT |
You can click texts colored in the table to view more detailed information
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NZ_CP011541_5 | 2574532-2574617 | Orphan |
NA
Consensus repeat of NZ_CP011541_5
|
1 spacers
spacers of NZ_CP011541_5
>5.1|2574557|36|NZ_CP011541|CRISPRCasFinder AGGTCAAGTCTGGCACAGATTCAATATCAGAACAAC |
CRISPR arrays and Neighbor proteins around NZ_CP011541_5
The CRISPR arrays of NZ_CP011541_5 >merge|NZ_CP011541|5|2574532-2574617|CRISPRCasFinder CCTTTTCGGCACGTTCGTGCCGGTTAGGTCAAGTCTGGCACAGATTCAATATCAGAACAACCCTTTTCGGCACGTTCGTGCCGGTT >NZ_CP011541|5|4|2574532-2574617|CRISPRCasFinder CCTTTTCGGCACGTTCGTGCCGGTT AGGTCAAGTCTGGCACAGATTCAATATCAGAACAAC CCTTTTCGGCACGTTCGTGCCGGTT
>NZ_CP011541.1|WP_047241121.1|2574304_2574517_-|helix-turn-helix-transcriptional-regulator MLEVAGPVRERRKVLRLTQSELADLAEVSERFVREVESGKSSVQLDKLQEVLAVLGLELQIVQFVPEALR >NZ_CP011541.1|WP_083984469.1|2573141_2574308_-|HipA-domain-containing-protein MNGDVWVDGRLAATLMRVEAGVEFSYTEDYLERPGRAVATTLPVTRDPVRTFAGALPPFFAGLLPEGRRLSVLRRSIKASADDELALLLAVGTNLVGNIQVVPSGTVPPSLVDVDNSAHIDLDAPNLDLRNVFTEVGNPDAHGLAGIQEKASGRTIAVPIGVGTIVKVSPPEFPRLVENEYSCLKAFASMKWGRGHVVDAKVIEDSRGMRALVVRRFDSNGTVKYPVEDASQLLGRYPADKYEVSWEELTHGVLAVTTTPKLAARSLALQLAFGWLSGNGDIHAKNISVVDYGRGFEVAPAYDLPSTVPYGDMTLALPVMGNREGLSRKRFLAYCESIGLAEKVANDVATQALAATANLGAELVRACAFDARRERDLLRVLRRRRQHW >NZ_CP011541.1|WP_047241120.1|2572204_2573134_+|cation-diffusion-facilitator-family-transporter MNSLPKQRAEALKKAIRLQWISIAVVIVTVAIVGVVAGQSQAMKAAWVEDLLALVPPIAFLVAAHVSKRPPSEKFPYGFHRAVGIAHLVAGFTLLAMGGLLAYESVSGLVTQEKPPIGLTVVAGHAVWAGWPMIVVMLLSIAPPMILGRLKMKLAEQLHDKVLYADADMNKADWTTGLGTAIGIFGVGFGLWWMDAAVATLVSLSIIKDGVTNVKAAVSDLMDTRVTTFDEKVPALLHEVDRRIQELDWVAASNTRIRDQGHVFHSETFVVPRSEPTLQQLNDARSMLTDLDWKMHDVVIVPVRALPEY >NZ_CP011541.1|WP_047241119.1|2571710_2572208_+|transporter-substrate-binding-domain-containing-protein MNLSIKADLTTHRINKAVLAALLTLGLASCSTLSALPKDSEGALHRAQHEELRVGVTEHLPYTDVHDDGAVTGSEAQLIDGFAQSIGTKPRWVPGSEEALVKQLEDGEIDVIIGGLTKKTQWSKKVALTRPYDKETKTVMAVPMGENALLTSLERYLAETTGEVQ >NZ_CP011541.1|WP_052843565.1|2570619_2571612_-|winged-helix-DNA-binding-domain-containing-protein MPASPIHTTDLQDEQLRELRARRLIAQALVPDRALADGQAVAQHMLAVQGQLYNSGLQALACRSLSSQAETEELVRAGQIVRTWSQRGTHHFLAAEDARWMMQLCSPRIEAAAAKRRPGLGLTEQMFDAARSALFEALREGPVARTEAYALFDAAGVDPTQQRGPHILRSLGSLGDIVQGPRRGSEDVFMLTENLPVVARELAGEEALAELGTRYFHSHGPATVKDLAWWSGLTIRDAKTVAKLARNTVAVELAGVEYRMGEWQLSVEWEALEAALALRLELPAFDEYLLGYGDRSAVCPADLVPIVGPTKNGMCRPFVVEQGVVVGAYG >NZ_CP011541.1|WP_047241118.1|2569073_2570558_-|mechanosensitive-ion-channel MPIGYILELIKQWIITHGIFLGLLVIVGFLIPRVGRRIIDGASRTVEDGTEAAKGRKAITGAMVYIAEAVAYTALVIAAMRNLGINLAAAAIPATVVSAAVGFGSQKIIGDLLGGFFIITEKQYGVGDWVKFYGSAATVEGDVVDMTLRATTIRTINGEEITVPNGEARMCVNASARWARAVIAIPVPITAGSSVAEINARTLAAAEDALLDPELKQHVRSDITFQAATAVTPPTAMGLPWTATMRLLIDVAPGKQWLVERAVRAAVLDEWWEDYGKRASSSPLATEAVTQKMSELLDTQEFRPISAAALVGTGSDVASAAESEALANAAENVDVPRTQVMQEIVEREDDDVPKPHRGQGIWTLGGRVRPSTTVLFLALFGLLLLGSMTLSGGERSDAGWLAPKSPVTAPPEPSLPAPVQPVVPTQQPAPVTSESAPTLTSEVTPTLSTSLPSSARGVRATETDDPVEETTATSAEAPTTEPSVVERATETPTM >NZ_CP011541.1|WP_047241117.1|2568052_2568976_-|hypothetical-protein MELFDIDPIDSRDIVTPVSAVRAMGALTDIGIMYRVDDDDPNDFYAHFAGFVIHFTWDGPFEPGLLVSARLWGRLPERRLADFQRWMVDFHAGSFQPIATYQQHDDGIHVVFRTKLSLKGGLSDSQLTANVKRLIDGIIGATSDAATEFPELAATEPGFLSSIDEENQNLILPVTLERLPVVLTALEVEDIESDGVNVVGRYGDREYACKMFAGGLWLQMRSEFEYEIEPQHLGEFTEFANKKNSEWRDTAVYIEELGENFRLVFESNTPVHIGMTTAQLGEALRDSLWGQDRLARQCHEELDLVDF >NZ_CP011541.1|WP_047241116.1|2567255_2568056_+|Fpg/Nei-family-DNA-glycosylase MPEGHVIHRLARDLNSAFTQTTPQVSSPQGRFATEAAQLDQQTFIGADAHGKHLFITFDHPLQIHIHLGLIGKFHLSEPKDPTPTTRLRIANDHTTADLIGPQWCRLITEDARAHTLAKLGADPLREDADPEWVWTRVHRSNRTIGSLLMDQKLFAGVGNIYRAEPLFRLGISPFLPGKQLSRPLFDALWTDLTELMADGVTKGRIDTIRPEHTPEAMGRPPRKDDHGGEVYVYRRAGQPCHVCGTPIEHQVMEGRNLFWCPGCQR >NZ_CP011541.1|WP_047241559.1|2566738_2567251_+|2'-5'-RNA-ligase-family-protein MASPENLLLYLSPDDENAVRKVFTELARRGFPTQHQTPHITLTFSPAMQPTVVHRAASLLRGLVPAEFQRVGTVVFGTKRKQTVAWLLETTNELEEAARELSALNPDGRGNRWTPHLTVGLRLPREIVPDYVAALDELDAPRIFQAVTAGYWRPDTQELRVLAGQPRPLN >NZ_CP011541.1|WP_047241558.1|2566095_2566680_-|VanZ-family-protein MRRHTAEPYRDATRSDVLAVVYYVPVLILLTLLKGYFVIGHLWRKDSHHIRELHLVPFREIWGASTWFGPIFNIVGNMVLFVPLGMLAFMLLRSIKHATLLGLATSLVIEVCQYVFALGVTDIDDLLWNTTGALFGAWLVWATGVRVEKLWRWACLLFATVIYVLYLLGPRLGSEEKMTPVACVTCLGTPAVAH >NZ_CP011541.1|WP_047241122.1|2574727_2576221_-|DUF1846-domain-containing-protein MTAHKIGFDREKYIAMQSHHIKERRDQIGGKLYLEMGGKLFDDMHASRVLPGFTPDNKIVMLEQLKDEMEILVCLNAKDLQRQKVRADLGITYEEDVLRLVDAFREQGFLVEHVVMTQTEDDNAQAAAFKQRAERLGLKVWIHRTIPGYPSNTRLVVSEDGLGRNEYAETTRDLVVVTAPGPGSGKLATCLSQIYHEHQRGIQAGYAKFETFPIWNIPLDHPVNEAYEAATVDLDDKNVIDPFHLAAYGETTVNYNRDVEVFPLLKTLLEKLSGHSPYQSPTDMGVNMAGHCISDDEVCREAGRQEIIRRYYKELVTEARGELDPVGSERVAMIMGRLGIETSERAVVAPALALAEETGGPAAALELADGRIVVGKTSPLLGCSAAVVLNALKLLAGIPDDVHLLSPASIEPIQVLKTKHLGSRNPRLHTDEVLIALSVSAGSDDNARLALEQLQNLRGCDIHTTTILGSVDEGIFRNLGVLVTSEPKFAKKTLFRK >NZ_CP011541.1|WP_047241123.1|2576328_2577072_-|DUF1295-domain-containing-protein MTLDLFIVAWIGIALFALAALWFIDAPYGRQMRSGWGPGVPNRLAWTLMEVVVLVSFYAVVWASGVELSLPTITFAALLTCHYVNRSFIYPWRTRTKGKVMPLSIMLMSVLFNSVNGFFLGSDLTALNRDSSWFSDPRFMIGLVIFGCGMALNMHSDNILLRLRKPGDTGYHIPRGGAFRWVTSPNLLGEIIEWIGFAILTWSLSGLAFALWTCANLVPRARSNQRWYQQKFPDYPSDRRVLVPGVW >NZ_CP011541.1|WP_047241124.1|2577122_2577968_+|SDR-family-NAD(P)-dependent-oxidoreductase MRSHWTASDLPDLHGETWLITGATRGLGLATARAASARGAHIILGVRDAARGAEVARELGDATVIPLDLSQLSSVRAATEHVPRVDVLINNAGSTTSVRSETPDGFEWHLGVNLLGPFLFTNLIAEQVRRRVVIVTSVTHHRAKFDFDDPHFTKRPWSQARAYSQSKLADLLWAHALQSKASFDVQTSHPGWSDTTLANPARSSFGQGVVSQVARRLANSSEQGALTTLFAATQDLPPVSLVGPSGLGELRGYPRLVRASESAKNPQLAERLWAFAEAATS >NZ_CP011541.1|WP_047241125.1|2577974_2579300_-|MHS-family-MFS-transporter MTTATSTQTNYEPTPLTAEHRRVLAGSMVGTTIEWFDFFIYAQAAGLIFAAQYFNPASNSSPALAQIVSWASIGISFLFRPLGAVIAGHLGDRLGRKIVLVLTLFGMGGATVAMGLLPNYAAIGIAAPLLLVVLRIIQGLSAGGEWGGAALLAVEHAPVNRRSYFGSYPQVGVPAGMFLATTFMLVLTRVTTDEQFNAWGWRIPFLSSIVMIGIGYFIRRMVEESPVFAELQNLQKESSAPLSVLFKRHTKDVFIAAFIFSGCNAAGYLAIAFFNSYGTKVLHLPKSQVLFVSLLSSITWLIGTLWSGLLGDKIGKRKTFAWAYVAMIIYAVPMWLLIDTKSIVLFAIAALILGILLGATYGPQSALYAEMFPADIRLSGVSISYAIGSIFGGAFAPMIAQMLLNKTGSSLSIGVYIAGVSLLSLIAVLLVPKEVEGRSLH >NZ_CP011541.1|WP_047241126.1|2579396_2580710_-|AMP-binding-protein MTSAYDITSSHHGPETGIEFASRDEITALQTARAKNTLRHAYYNVPHYRRVFDEMGVHPDDFKELSDLAKFPFTEKKDLRAEYPFGMFAVGDHQIARIHASSGTTGLPTVVGYTRKDIETWADLVARSLRAGGVRPGDKVQVAFGYGLFTGGLGAHYGVEKLGATAIPTSGGMTERQVQIIRDFKPDAIMATPSYMLNVVDRMRQEGMDPAETSLRVGIFGAEPWSEGMRRELETGLGIDATDIYGLSEVMGPGVAQECVETKDGLTIWEDHFYPEIVDPETLQPVPDGELGELVITPLTKEAFPVIRYRTHDLTRLLPGTARSMRRLARISARNDDMIILRGVNCFPSQFEELIVEEDALKTKYQCVLDRKGRMDTLTILVEGNPDFAKDVQDDAGRHLQKQIKNRIGITVGVEVLDHVDTGEGKAKRLVDNRPKD >NZ_CP011541.1|WP_158408053.1|2580913_2581069_+|hypothetical-protein MKANIFIALALGFLAVVAIAYGFMYDWKLLIPAVIFGLVSVIFYSGWGNRR >NZ_CP011541.1|WP_047241127.1|2581090_2581684_-|TetR/AcrR-family-transcriptional-regulator MVETQTKQGRPGYSREDVTRIAVQEFNARGYEATSMGELAKVLGLSKSAIYHHISSKEELLKEATDRALKLLDDLVAECDRTQGPAVARLRFLVRGTTLALCREPEYVTLLLRLRGNSEVETAAMARRRAFTGYVVGLVEAAQKEGAIDADVVPGVAGRLLLGMVNSLVEWYSPAGSLEPEDVADIVETMVFLGLEL >NZ_CP011541.1|WP_047241128.1|2581729_2582188_+|hotdog-fold-thioesterase MVRRMTTSILAPGVASGPEFDHVRAMFSNDPATETLGATITHIAVGECDGHFTVQPEQCNGHGTVQGGILFTFADSLFAGACNAAGQTAVAVHNSIHYIAPAFQGQRIDGVARTVQSWGRNGFVDVSLTCDGKPIAEFRGTFRVLPGKPEQR >NZ_CP011541.1|WP_047241129.1|2582289_2583246_+|1,2-phenylacetyl-CoA-epoxidase-subunit-A MTTPELSQEQQHFDQLIADDSRVEPTDWMPEGYRKTLTRQISQHAHSEIIGMQPEANWITRAPSLKRKAILMAKVQDEAGHGLYLYSAAETLGTDRDTLVDQLLEGKAKYSSIFNYPARTWADVGAIGWLVDGAAICNQVPLCRCSYGPYGRAMVRVCKEESFHQRQGWEILYELANGTPAQKQMAQEAINRFYGPALQMFGPPDDDSPNSQQSMAWNIKRFSNDELRQRFVDMIVPQAEALGLHFEDPDLKWNEERGHYDFGALDWDEFFGVIKGDGPCNEQRAQRRRQAFEDGAWVREAAAAYAEKYESADTSLIA >NZ_CP011541.1|WP_047241130.1|2583256_2583541_+|1,2-phenylacetyl-CoA-epoxidase-subunit-B MSNNWPLWEVFVRTNRGLSHVHAGSLHAPDATMALRNARDLYTRRNEGTSVWVVPAEAITASDPDSKGGFFESAQGKSFRHATYYTKSEGVKHL |
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CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
---|---|---|---|---|---|---|---|
NZ_CP011541_2 | 2.5|924768|33|NZ_CP011541|CRT | 924768-924800 | 33 | NZ_CP011541.1 | 924483-924515 | 0 | 1.0 |
NZ_CP011541_2 | 2.9|924963|33|NZ_CP011541|CRT | 924963-924995 | 33 | NZ_CP011541.1 | 924483-924515 | 0 | 1.0 |
NZ_CP011541_2 | 2.3|924657|54|NZ_CP011541|CRT | 924657-924710 | 54 | NZ_CP011541.1 | 924462-924515 | 1 | 0.981 |
NZ_CP011541_2 | 2.6|924819|18|NZ_CP011541|CRT | 924819-924836 | 18 | NZ_CP011541.1 | 1631984-1632001 | 1 | 0.944 |
NZ_CP011541_2 | 2.7|924855|33|NZ_CP011541|CRT | 924855-924887 | 33 | NZ_CP011541.1 | 924483-924515 | 1 | 0.97 |
1. spacer 2.5|924768|33|NZ_CP011541|CRT matches to position: 924483-924515, mismatch: 0, identity: 1.0
gggcgccgggtctgtggtggtggcagtcgttgt CRISPR spacer gggcgccgggtctgtggtggtggcagtcgttgt Protospacer *********************************
2. spacer 2.9|924963|33|NZ_CP011541|CRT matches to position: 924483-924515, mismatch: 0, identity: 1.0
gggcgccgggtctgtggtggtggcagtcgttgt CRISPR spacer gggcgccgggtctgtggtggtggcagtcgttgt Protospacer *********************************
3. spacer 2.3|924657|54|NZ_CP011541|CRT matches to position: 924462-924515, mismatch: 1, identity: 0.981
tggttccgtggtggtggctgcgggcgccgggtctgtggtggtagcagtcgttgt CRISPR spacer tggttccgtggtggtggctgcgggcgccgggtctgtggtggtggcagtcgttgt Protospacer ******************************************.***********
4. spacer 2.6|924819|18|NZ_CP011541|CRT matches to position: 1631984-1632001, mismatch: 1, identity: 0.944
ttcggtggtggctgctgg CRISPR spacer ttcggtggtagctgctgg Protospacer *********.********
5. spacer 2.7|924855|33|NZ_CP011541|CRT matches to position: 924483-924515, mismatch: 1, identity: 0.97
gggcgccgggtctgtggtggtagcagtcgttgt CRISPR spacer gggcgccgggtctgtggtggtggcagtcgttgt Protospacer *********************.***********
CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
---|---|---|---|---|---|---|---|---|
NZ_CP011541_1 | 1.2|457276|32|NZ_CP011541|CRISPRCasFinder | 457276-457307 | 32 | KJ567041 | Mycobacterium phage Zapner, complete genome | 36422-36453 | 5 | 0.844 |
NZ_CP011541_1 | 1.2|457276|32|NZ_CP011541|CRISPRCasFinder | 457276-457307 | 32 | NC_022069 | Mycobacterium phage Jabbawokkie, complete genome | 36421-36452 | 5 | 0.844 |
NZ_CP011541_1 | 1.4|457399|32|NZ_CP011541|CRISPRCasFinder | 457399-457430 | 32 | NZ_CP017076 | Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence | 763194-763225 | 7 | 0.781 |
NZ_CP011541_1 | 1.1|457215|32|NZ_CP011541|CRISPRCasFinder | 457215-457246 | 32 | NZ_CP014508 | Burkholderia sp. PAMC 28687 plasmid 1, complete sequence | 183815-183846 | 9 | 0.719 |
NZ_CP011541_1 | 1.1|457215|32|NZ_CP011541|CRISPRCasFinder | 457215-457246 | 32 | NZ_CP014310 | Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence | 519178-519209 | 9 | 0.719 |
NZ_CP011541_1 | 1.5|457460|33|NZ_CP011541|CRISPRCasFinder | 457460-457492 | 33 | GQ452243 | Enterococcus phage phiEf11, complete genome | 30056-30088 | 9 | 0.727 |
NZ_CP011541_1 | 1.5|457460|33|NZ_CP011541|CRISPRCasFinder | 457460-457492 | 33 | NC_028671 | Enterococcus phage vB_EfaS_IME197, complete genome | 28796-28828 | 9 | 0.727 |
NZ_CP011541_1 | 1.5|457460|33|NZ_CP011541|CRISPRCasFinder | 457460-457492 | 33 | CP002962 | Emticicia oligotrophica DSM 17448 plasmid pEMTOL01, complete sequence | 172769-172801 | 10 | 0.697 |
1. spacer 1.2|457276|32|NZ_CP011541|CRISPRCasFinder matches to KJ567041 (Mycobacterium phage Zapner, complete genome) position: , mismatch: 5, identity: 0.844
gcttcccatctccgggaagctttcgggaaaac CRISPR spacer gcttcccggctccgggaagctttcggcaggac Protospacer *******. ***************** *..**
2. spacer 1.2|457276|32|NZ_CP011541|CRISPRCasFinder matches to NC_022069 (Mycobacterium phage Jabbawokkie, complete genome) position: , mismatch: 5, identity: 0.844
gcttcccatctccgggaagctttcgggaaaac CRISPR spacer gcttcccggctccgggaagctttcggcaggac Protospacer *******. ***************** *..**
3. spacer 1.4|457399|32|NZ_CP011541|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 7, identity: 0.781
cgatgacgtaagccaggctgacgtcaccgatc CRISPR spacer cgttcgcgtaagccaggttgacgtaaccggac Protospacer ** * .***********.****** ****. *
4. spacer 1.1|457215|32|NZ_CP011541|CRISPRCasFinder matches to NZ_CP014508 (Burkholderia sp. PAMC 28687 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719
tacggctcactggattcccaagatcttgggaa CRISPR spacer tgacccggactggcttcccgagatcttgggac Protospacer *. * ***** *****.***********
5. spacer 1.1|457215|32|NZ_CP011541|CRISPRCasFinder matches to NZ_CP014310 (Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719
tacggctcactggattcccaagatcttgggaa CRISPR spacer tgacccggactggcttcccgagatcttgggac Protospacer *. * ***** *****.***********
6. spacer 1.5|457460|33|NZ_CP011541|CRISPRCasFinder matches to GQ452243 (Enterococcus phage phiEf11, complete genome) position: , mismatch: 9, identity: 0.727
ggatttctcggaaatttccgataaaccctccga CRISPR spacer cagtttctcggaaaaatccgataaaccttttgg Protospacer ..*********** ***********.*..*.
7. spacer 1.5|457460|33|NZ_CP011541|CRISPRCasFinder matches to NC_028671 (Enterococcus phage vB_EfaS_IME197, complete genome) position: , mismatch: 9, identity: 0.727
ggatttctcggaaatttccgataaaccctccga CRISPR spacer cagtttctcggaaaaatccgataaaccttttgg Protospacer ..*********** ***********.*..*.
8. spacer 1.5|457460|33|NZ_CP011541|CRISPRCasFinder matches to CP002962 (Emticicia oligotrophica DSM 17448 plasmid pEMTOL01, complete sequence) position: , mismatch: 10, identity: 0.697
ggatttctcggaaatttccgataaaccctccga CRISPR spacer tgatttgtcggaaatttccgacaaattattttc Protospacer ***** **************.***.. *..
Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
DBSCAN-SWA_1 |
1156427 : 1163244
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NZ_CP011541|1156427:1163244|DBSCAN-SWA CATGCCAAGGAAATTTGACCAGGATGCGAAGGACCGTGTGGTCCGTCTTGTGGAAGACCGCATCTTGGCGGAAAACATGTCGATGCAAGCCGCGTGCCAGGCAGTAGCTCCAAAGCTGGGGGTTTCATGGCACACGGCCCGTCAATGGACTCAGCAGGCACGCCGTGCGGGAAACATACCAGAACCTGTGCCTGAAGATTTGGCTGCCGAGAACGCGAGGCTACGTCGTGAAAATCAAGAGCTACGCGACACTAACGAGCTGCTGAAGGCTGCCTCAGCTTTTTTCGCGTCGGAACTCGACCCAAAACGTCGGAAATGATCCGATTCATCGATGAATACCGGAATCGTTTCTCCGTCGAGTTCATCTGTAAGACGTTGAAGAATAACCGGGCTGGTGGGTTTATCACCTCGCGTGGGTATCGCCAGTCCAAGGCCCGTGGATTGAGTGCTCGTCGCCTTCGTGATGCTGTGCTGGTCGACCGCATTAGAACTGTTCATCGGGATAATTACGGCGTCTACGGCGTGCGGAAAATGTGGCATGCTCTCCGCCGTGACGGAATTGATATCGGTCGTGAACAAACTGCTCGGTTGATGCGCTTGGCTGGTGTTTCTGGCAAAGGCAGATCACCTCTCACAACCCGTAAGGCTAATGTGCCTGATCTGCGCCCGGACTTGGTCGAGCGTGAGTTCAAAGCTCAGGGCCCGAATAAACTGTGGGTGGCCGACATTACGTATGTGCGCACGAAGAAAGGCTTTGTGTACGCCGCGTTTATCACCGACGTTTACTCTCGACGGATCGTTGGGTGGGCGTTATCAGACTCGATACGGACGGAAACACTGCCGCTGCAAGCTCTTAACCAGGCGATCGTGTGTGCTGAGGAAACAACAGGTCTCATTCACCATTCGGATCACGGCTCACAGTATGTCAGCGTTGTCTACAACCAGCGACTTGCCCAGCACGGGATTGCCGCTTCCACCGGAACGGTCGGGGATTCTTATGACAATGCTCTGGCAGAAAATGTTAATGGTTCCTACAAGAACGAGCTGATCCATGCTCGCAGGTGGGATGATGTTGTCGAGGTAGAAATCGCGACGTTCGAGTGGGTGTCATGGTGGAACGAGACTAGGCTCCACCAAAGCTTGGAATACCGAACCCCGGTCGAGGTCGAAACCGAATTTTGGAAGCAGAACCCGCCACAGGAAATAATAGAAATCAAGGCAAACGCCTAGGAACAAAACCCGGGGCACTTCACTCGAGATTCTTTTCTGCCCGTGCCCGACAGGTAGGTGCGATACGGCAGAACTGGCACCAAAACCCGGGTTTGAATTCGCCCTCACCTTGTGCGGCCAGGTCGGCTGCCGGACCGACGACCTCATGGCCCCAACGCTCCAAATCGTGGGTGCTAAGGCTCCAGGTTGAGATGGACTGGCGGCGCGGCTGCACAATCGTCAACTGCACCTCAGACAGGTCATAAAGGCTGCCGAAAGCATGCAAAGCACCCAGACCATAGAGCATGAGCTGCGGGTTCTCCTCAGCCTCAACCAGCACGCCTTGGCCGTATTTGAAGTCGATGACTTCGATGCGGTTGCCGGCGATGATGATGCAGTCGGCGGTACCAAACCCACCAGGCACAAGGTGGCTGAAATCCAGTCGCTGCTCGACAGCCATCACAAACGATGGGTCATCGGCCTGGGCTTGTGAGGCTCGCTCCAAGATGAAGGTGGCGTAATCACTGGTGTGTTCTTCCATCTCCTCATCGATCAGAGGACTGGCTGGCTTTTCACCTGCATCGTCACGGAGCCTGTGGTCGAGGCGGCGGATCTTCCACTCAGCTAGTGCGTGGGCGACGGTTCCTTGCTCTGCAGCCGGTGATGAAGTATCGCCGTGTTCTGCGCGAAGGGCTGCCTCGATCAGGGCTGATGGGGTGCAGTTGATCCACCGGTGCGCACCTGACGCTGAGAGTGTTGCGTGAGCTACCGGGGCCATTTATTTCAGCTCCTTCGCCCGTGCAAAGAGTGCCGCATACTGTTCTTCAGGAACAGCAGAGAGCTTGTCGTACCCAAACTCACCCAACAGGCCGCGTACCTTTTCAGTCAGACCCGACTGGGACAGCCGGGCAAGCAAAGTGCGAAGCTCAACCAGCGTCACCTCAGCCATAACCTCTGGTGCGGCCGCAGCTGCTGCTTCTGGTGTTGCTGTCTGTTCAGCTTGGGCCTGTGCAGCCTCGTAGGCTTCTGCTTCAGCTACAAGGTCCGGGCGGTACAGCTCTGCCGCTGTGATGGGACGCGCTCCAACAGCGTCGGCGTGATCCTCGATGGCCGCCCAGGAGGTTTCTTCAATCGCCTTGCCTAGCAGGGTCACGCCTTCAGCAATTGTGTTCAGTGCGTGGATGAACTTATTTGAGTCAGTGATGTTCATTGCTTAGGCCTCCTGCTTCTTGCCAGCCGGGTGGCGCATAACCGCATCAGCCAAGGCCATCAGATCGTCTTCTGGCTTTTGGGTGATGGTGACCTGGTCGACGCTGTCGCCAGGAACAACGATGGTGAACTTCTTCTTGTCACCCAGTAGGAAACGGGCGAAGCGTTCACGCAGGGTGATGTTGCGAAGGCCAACGACCTTCTCACGGTCAACCTGGGTGCCCAGGTTGAGATTCAAGTTGTGCCGCATGATGTGGCTACCTTCCACTCGGGCAAGACCCGGTGCCGGGATTGGCTTTTTCTGTCTTGCTACTGGAAGGGCTTCAAACGGCCATGTTTTATAACCGCTCATGCCAACTTCTCCTGAAAATCTTTCGCCAGTTTCTTCAACCGCTTTGCTACAGCGGGCTGGGAGATACCAAGTTGCCGAGCGATGTCAGACTGGCCGTAGCCCATCCGCTTGCCAATGACGATGGCGCGATCGACCCGGTCAAGAGTTGCCAGGAAGTCCCGGTACTGGATTTCCGCGTCCCACTCGTCAGATGGCTCATAAATGTCATTTGACGTAGCTTCGACGATTGAAACCTGCTCAGCCTGGTCTTCTTCGGCAAAGTTCCTGGGTGCTGCTTCAAACCAGGTGTTCCGTAGGTGCTGCTTCGCGTTGTTGTAGTCCAGGTTGCCCAGCTCTTTGAAGATGTCATGGACACTGCGGCGGCTTACCGCAGCAGGATTTTCAGCCTCGTCTTTGCGTTGCTGGTAGTCGCGTTCGACCATGATCTCTGCCTCGTCAGCAGTGATGTAGTAGGACTGGTTGCGTACTGGGTAGCGTTCACTGATCCCTTCGGTGCGTTCGTACTGGAACACAATCTTGATGGTGTTTGGCTTATCAGCCATGAGCCTTGCTCCTTCACGTTGTTGGTGAAGGGGAAGACCCGATGAGCTAACACGTGTTGGGAGTCAAAAGCGTTGAGCAATAAAGAACGGGCACCTCAACCCCACAGCCAGATACGTGACTGCGGTGGTCAAGGTGCCCGTTAAGCGCTCAACGGTGACTTCCCGCTACGACAAATGCGCGCGAAAAACTAGAAACGGTGGTTCATACTGCGACTAGACCCGGGTGCCGCGGTGAGCCATATGAAGTGGAGGCGACCCAGCTACAGCTGGTCACTGGGCCGCCGAGGATGCCTTACTTACGTTTTGAAGGCTTGGCTTGTGCCAGAACGGAACCAGCCAGTTGCTTGGTTAGCTTGCTGGTGGCCTTGCTCCTTAGTGCTGCTGAAGCTGCCGTTGCAGTCTTAGCTGAGCTTTGCTTGGGGTTGTGTTTGCCCACGTCGTCACCTCCGATCAAAATCTCTAGATCCAATACCGGGATATGAGGGTTTAGTGCCAAGTAGTGTGAGATAATCAGGGTGACCCGACCGGCTCTTCTACGTGAACTTTCCTCATGTATCCACGGTATGAAGCAGTTTTGGGACGGCGGAACGGCTGTTGCTGGCCATTTTTGGGACAACCGGGTCGATTTTTGGGATGAGCTTAGAAGGAGATAGGGTGACCACACTCAAAGAGCTGTGCAGGGCCGCCTATCGCAAGTGCGATAAGCACAAGTCCCAAGGAAAGTTCGCCGTTCAGCTCTTTGAAGCATGCGGGTGCACCTATCGCTTTGATAAATCGGGTGACTACGCTAGAAAAATATGTTTTGACGCCCGTGCAATCTCAGATGACATTCGTTTAGCACTACCGAAAACTGGGGTTAAGACAGCGGCTGTTTCTCAGTTCATTCAACTCAGCATGGAATCTAGTCGTGGCGAAAAGCAAACCATGCAAGATCGTCTGCAAGAAGTGGCACGTAATTTAGGGTTTCCGAGCGACGTCGAGGTTGAGTCCGAAGCCTTTTACTGCGCATACGCGCATGCAATAAAAATTGCAGTCCAAGGCTTGAATGATCAACGGGACGTCCTTAGCCTTTATGAACTTCACGTTTCAGAAGCTGTTGATGAAGACGATCAATATTGGACACCTTTATATGAAGGCGACAGGGTGAAAGCGTCACAGCCGCCTGCGCTGCAGAACAATCAACTCGATTACTGGGAGCTGCTCACTCACGAATGGGTACTGCACAACCAAGGAAGTCTCCGGTGGGAAAACCGGACATTGGTATGTCTAAATCCAAATGACCGTTTTCTAAGGCCGATGGACACCGAACTCATAGAGATTCCAACGGTTGAACCATCTAAATTCGTCAGGATCAGTGCAACTTTCAAAGCACGTGGGCGCGACGGAACAGGGACTAGCGAGTGGAGAATGCTTGACCAACGGGGACAAGATTGTTTCCCAAATCAAAGATCTGAATTTAACGTGCAAGCACACATTGGCAACAACACCGTATTGGGCGAAGGGCAAAAGGCATGAGTGTTGAAACAGAAAAATGGGTAACCATGAAAGACGTCCAAGAACACATGGGCGTCACAAGGGAAACCATAACTCAATGGATAAACACCAAAAAAATGCCTGCCTACAAGGTGGGCCGCTCATGGAAATTTAAGCTCTCAGAAGTCGACGACTGGGTCCGCTCCAACGGCGCAGCTGACGATCAAAACGAAGTAGAAATCTAAACGAGGTACGACATGCCAGAACTTAATTGGGTCGGTAAAGACAAAGTCATCACCCACCATCTAGACGTACCATTCCGCGTTCTCGACCACCAGTATTCTTTCGATGAGAACGGTCAGCACGAAGCTGACAATGGTTCAGAAAATATGATCATTCATGGTGACAACCTCGAAGCGCTCAAAGCACTGCTTCCGCGCTACGAAGGCAAAGTTGACTGCATATACATCGACCCTCCATATAACACTGGCAACGAGGGGTGGGTCTATAACGACAATGTCAATGATCCACGTATCAAGAAGTGGCTGGGTGAAGTTGTCGGTAAAGAAGGGGAAGACCTCTCCCGGCACGACAAGTGGCTATGTATGATGTACCCGCGCCTCAGACTTCTTGGGAAGTTGCTTTCTCCGAAAGGAGTACTCATTGCAAGCTTGAGCATCCACGAGCTTCATTTCTTCTTGGAAGTGCTGAATGAAATCTTTAGCTCTCGCCAAGTAATACCGGTGACGGTGCAGACTTCTGGGGGTAAAACCAATAAGGGTTTTAATCACCAGAGCGAGTTTTTGATATTTGTAACGCCAAAAGAGTTTGTGCCAAATTCATACAGAAGCGCAAAAAATACCTATGCCAGCGGGTACCACGGAATGAATCTAGCCGGATTCAATCAGACAAACAGGCCAAATCAGGCATATCCAATTTTCGTTAACGAAAAGGGCGCGATTGTTGGAGTAGGTAAGTCTCTCAAGGAACGCGTAGAAGACGGATCCTACGATGGAGATCTTGCAAACTTTGAGTTTGATTATGATGAAGCACCATCTGGTTCGACCGCTGTTTGGCCCGTCACAGCAAAAGGTGTTCCCTGCGTATGGCGTTTGCAGGCTAAGCGCCTTCTGAAAGAGTGGGAACGAGGATTTATTAAAGTCGTTCCGTCAAAAGACAAGACCAAAAATATCTGGGCAGTTCAGTATCTATCCGATGGTATTTTGCGAAAGATTGAAAGTGGCGATTTTGTAACTTATCGGATTTCCGATGACCCAGAAATTCCAACGTTGGAGCTAAAAAATTATGAAACGAGCGGTTCGAGTATCCCGACCGTTTGGTACGAAAAGGAATACTTTACGACTAGAGGTAGTGAGCTAATTAGAGAAATTCTTGGCTCAAAGGATGCATTCACCTATCCAAAGCCAATAGATATCGTTCAAGAGGCAATAGGACGAGTTACTAAGCCTGATTCCCTTGTTTTGGATAGTTTTGCCGGCTCAGGCACCACGGCGCATGCGGTTCTGAATCTGAATTCAGAAGATCAGGGTAACCGGAAATTCATACTCATTGAACTCGACGATTATGCAGAAACGGTGACAGCGGAACGCATCCGAAAAGTCATTAAAGGATACGAAGACGTTGAAGGCGATCTCGTTCCGGGAACCGGTGGAAGCTACTCGTTCTTTTCGTTAGGAACCACATTATTTGAAGGTTCCGACCTGAACCCAGAAGTGCCACTTGATCAAATTAGAGCGTATATCTGGCATTCAGAGACAGGTATTGAGGCTGCATCAAATAAAGTTGTTGAGTTTCCAGATTTCCTCGGTATCCACAACGACACTAGCTACATCTTTGCCTACGAACTCGACAGAGCCACTGTGCTTGATCGTGAATATCTCAGCCGTATCCCAGCTGAATGCGGTGCAACCTCGTATGTCATCTATTCGGACACCTGTTTGCTGTCTGAACAGGAACTACGTGAAATGAACATTACTTTTAAGAAAATCCCGCGAGACATCACCCGCCTCTAG
Protein sequences of DBSCAN-SWA_1 >NZ_CP011541|1156427:1163244|1157675_1158413_-|WP_052843392.1|DBSCAN-SWA MAPVAHATLSASGAHRWINCTPSALIEAALRAEHGDTSSPAAEQGTVAHALAEWKIRRLDHRLRDDAGEKPASPLIDEEMEEHTSDYATFILERASQAQADDPSFVMAVEQRLDFSHLVPGGFGTADCIIIAGNRIEVIDFKYGQGVLVEAEENPQLMLYGLGALHAFGSLYDLSEVQLTIVQPRRQSISTWSLSTHDLERWGHEVVGPAADLAAQGEGEFKPGFWCQFCRIAPTCRARAEKNLE >NZ_CP011541|1156427:1163244|1160392_1161253_+|WP_047240096.1|DBSCAN-SWA MTTLKELCRAAYRKCDKHKSQGKFAVQLFEACGCTYRFDKSGDYARKICFDARAISDDIRLALPKTGVKTAAVSQFIQLSMESSRGEKQTMQDRLQEVARNLGFPSDVEVESEAFYCAYAHAIKIAVQGLNDQRDVLSLYELHVSEAVDEDDQYWTPLYEGDRVKASQPPALQNNQLDYWELLTHEWVLHNQGSLRWENRTLVCLNPNDRFLRPMDTELIEIPTVEPSKFVRISATFKARGRDGTGTSEWRMLDQRGQDCFPNQRSEFNVQAHIGNNTVLGEGQKA >NZ_CP011541|1156427:1163244|1161249_1161456_+|WP_047240097.1|DBSCAN-SWA MSVETEKWVTMKDVQEHMGVTRETITQWINTKKMPAYKVGRSWKFKLSEVDDWVRSNGAADDQNEVEI >NZ_CP011541|1156427:1163244|1161468_1163244_+|WP_047240098.1|DBSCAN-SWA MPELNWVGKDKVITHHLDVPFRVLDHQYSFDENGQHEADNGSENMIIHGDNLEALKALLPRYEGKVDCIYIDPPYNTGNEGWVYNDNVNDPRIKKWLGEVVGKEGEDLSRHDKWLCMMYPRLRLLGKLLSPKGVLIASLSIHELHFFLEVLNEIFSSRQVIPVTVQTSGGKTNKGFNHQSEFLIFVTPKEFVPNSYRSAKNTYASGYHGMNLAGFNQTNRPNQAYPIFVNEKGAIVGVGKSLKERVEDGSYDGDLANFEFDYDEAPSGSTAVWPVTAKGVPCVWRLQAKRLLKEWERGFIKVVPSKDKTKNIWAVQYLSDGILRKIESGDFVTYRISDDPEIPTLELKNYETSGSSIPTVWYEKEYFTTRGSELIREILGSKDAFTYPKPIDIVQEAIGRVTKPDSLVLDSFAGSGTTAHAVLNLNSEDQGNRKFILIELDDYAETVTAERIRKVIKGYEDVEGDLVPGTGGSYSFFSLGTTLFEGSDLNPEVPLDQIRAYIWHSETGIEAASNKVVEFPDFLGIHNDTSYIFAYELDRATVLDREYLSRIPAECGATSYVIYSDTCLLSEQELREMNITFKKIPRDITRL >NZ_CP011541|1156427:1163244|1156427_1156745_+|WP_013887466.1|transposase|DBSCAN-SWA MPRKFDQDAKDRVVRLVEDRILAENMSMQAACQAVAPKLGVSWHTARQWTQQARRAGNIPEPVPEDLAAENARLRRENQELRDTNELLKAASAFFASELDPKRRK >NZ_CP011541|1156427:1163244|1159192_1159738_-|WP_047240095.1|DBSCAN-SWA MADKPNTIKIVFQYERTEGISERYPVRNQSYYITADEAEIMVERDYQQRKDEAENPAAVSRRSVHDIFKELGNLDYNNAKQHLRNTWFEAAPRNFAEEDQAEQVSIVEATSNDIYEPSDEWDAEIQYRDFLATLDRVDRAIVIGKRMGYGQSDIARQLGISQPAVAKRLKKLAKDFQEKLA >NZ_CP011541|1156427:1163244|1158848_1159094_-|WP_047240094.1|DBSCAN-SWA MRHNLNLNLGTQVDREKVVGLRNITLRERFARFLLGDKKKFTIVVPGDSVDQVTITQKPEDDLMALADAVMRHPAGKKQEA >NZ_CP011541|1156427:1163244|1156741_1157656_+|WP_047240092.1|transposase|DBSCAN-SWA MIRFIDEYRNRFSVEFICKTLKNNRAGGFITSRGYRQSKARGLSARRLRDAVLVDRIRTVHRDNYGVYGVRKMWHALRRDGIDIGREQTARLMRLAGVSGKGRSPLTTRKANVPDLRPDLVEREFKAQGPNKLWVADITYVRTKKGFVYAAFITDVYSRRIVGWALSDSIRTETLPLQALNQAIVCAEETTGLIHHSDHGSQYVSVVYNQRLAQHGIAASTGTVGDSYDNALAENVNGSYKNELIHARRWDDVVEVEIATFEWVSWWNETRLHQSLEYRTPVEVETEFWKQNPPQEIIEIKANA >NZ_CP011541|1156427:1163244|1158413_1158845_-|WP_047240093.1|DBSCAN-SWA MNITDSNKFIHALNTIAEGVTLLGKAIEETSWAAIEDHADAVGARPITAAELYRPDLVAEAEAYEAAQAQAEQTATPEAAAAAAPEVMAEVTLVELRTLLARLSQSGLTEKVRGLLGEFGYDKLSAVPEEQYAALFARAKELK |
9 | Enterobacteria_phage(33.33%) | transposase | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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DBSCAN-SWA_2 |
1227641 : 1234815
Sequences of DBSCAN-SWA_2
Nucleotide sequences of DBSCAN-SWA_2 >NZ_CP011541|1227641:1234815|DBSCAN-SWA CATGACTGACCCGGCTGTTATTGCCGAACAGTGGCTGTCGCATTTGGCAGTTGAGCGGGGGCTTTCGGCTAATACGTTGTCCAATTATCGCCGGGATATCGCCCGATACCTCGGGTGGCTCAGCGAGATCGGGCGGACCGATTTCAGCAAGGTGAGCACCACGGATATCGAAAACTACGTGGCTGAACTGCGGCGCGCGGACCCCGACACCGAGCGCAAGCCGTTGTCAGCGGCCTCTGCCGGGCGCGCTTTGGTGGTGGCTCGGGGTTTGCATAAGTTTGCAGTCGCCGAAGGTGCGCTGGAGGTTGACGTGGCGGCCGAGGTGTCCCCACCGCAGGTCGGCAAACACTTGCCGGACACCCTAAGCATCGACGAAGTGGCCGCGCTCATCGAAAAGACACCGACAGACACCGCGGTGGGAGTGCGCGATCGGGCATTGCTGGAGCTGTTGTACGGCACGGGAATGCGCGTTTCGGAAGCTGTCGGTTTGCTTGTCGACGACCTCACGCAGCAAGACGGAGTGCTGAAAATTACTGGTAAGGGGAATAAGCAACGCATCGTGCCGGTGGGGACCCACGCGCAGGAGGCGATGGAGGCGTATCTGGTCCGCGCACGTCCAGCTCTTTCGCAAGGCAAAACGCATGCTGCGTTCCTCAACACTAGGGGCGGGGCGCTGTCGCGACAAAGCGCGTGGGGGATCATCAAGGCCGCGGCAGAGCGAGCCGGGATTGCGAAGGAAATCTCCCCACATACGTTGCGCCATTCCTATGCGACGCATCTGTTGCAGGGCGGTGCCGATGTCCGCGTGGTTCAGGAATTACTGGGCCATTCTTCGGTGACGACGACCCAAATTTACACTCATGTGAGTGCAAACAATCTGCGCGCGGTGTGGGCATCTTCCCATCCACGCGCCTAAAAGTTCAGTCACTACACTTGACTTTCGTACTTTTTGAATTCCAGCGGCGATCAAACTTACATCAGAGTGCTATGAACGCTAAAGTCTGTAGGTAGTTACATGGCTGTTATTCGAGCTCGGTAAGTTGCAGAGGTTGCCTTCGGTTGACATTATCGAGCTCGGAATCTAGCTCGGGTACTACCCGTTTACATCACTGTCAAGGAAGAGGGATTGATCATGGCTGACTCGGATCAGGACGCAGCGCTCTTCGAATCTCCCGAGCTTGGGCTAACCGGCCGTCCGGTCCGCGACATTCCCGAACCGGCCCCGTTGGCCACTCATGGGCCGGCGCACATCATCGCAATGTGCAATCAAAAGGGTGGTGTGGGCAAGACAACGTCCACGATCAACCTCGGGGCGTGTCTGGCGGAGGCTGGCCGGAAAGTACTCCTGGTCGATCTCGACCCACAAGGTGCGCTCTCAGCAGGTCTAGGCGTGCCGCACGATGAGCTGGACATTACTGTCTACAACTTGTTGGTGGACAGCCGTGCGTCGATTTTTAGCGCCATTCACCGCACGAATGTTGCTGGGTTGGATCTCGTACCAGCCAATATTGACCTGTCGGCTGCGGAAATTCAGCTGGTGAATGAGGTTGGTCGCGAGCAAACTCTCGCGCGAGTGCTGCGCCCGGTGATGAAGGACTACGACTACATTATTCTGGATTGCCAGCCTTCGCTGGGGTTGCTCACCGTTAATGCTTTGTCGTGCGCGCAGGGCGTCATCATCCCGATGGAATGCGAATATTTCTCACTGCGTGGCTTGGCACTATTGACCGACACCGTGGAGAAGGTGCGCGACCGGTTGAATTTCAACCTGGAGACCTTGGGGATTTTGGTGACGATGTTCGACCGTCGCACCAGCCACGCCCGCGAAGTAATGAGCCGGGTGGTCGAGGTGTTTGGCGACCAGGTTTTCGACACCGTTATTACCCGCACGGTGCGCTTCCCGGAGACGTCGGTAGCGGGTGAGCCAATTATTACGTGGGCTCCGAAGTCGCAGGGTGCTGAGCAATATCGCAACCTAGCTCGGGAAGTCATTGAACGCACCGCATAGTCGATCCGGTGACAATTCTCGGGTGCGACCTCGGCTCTCGCCGCCGATGCCAGCGGAAACGGAGCAGCCGGAGATCACCGGCTTTCAGGTTGCCTTGCGCAATTTTTCGGGCCCATTTGACTTGCTTTTGCAGCTGATATCGGCCAAGAAGCTGGACATTACAGATATTGCGCTGGCTGAGGTAACTGACGAATTCATTTCCTACACCAAGGCTTTAGGAGAAACCGCTGAACTGGATGTGATCACCGAATTCATCGTGATCGCCTCTACCTTGTTGGATCTCAAGGCAGCCCGACTGATTCCGCGTGGCGAGGTAGAAGATGAGGAAGACTTAGCGCTGCTGGAGACGCGTGACCTGCTATTCGCCAAGCTATTGCAGTACAAGGCGTATAAGCAGGTGGCAACCATGTTTGCCGAGTGGCAGCGTCGCGCGCAGCGTAGCTATCCGCGTGCGGTCAGCCTGGAACCTCAGTTCGTCGGCTTGCTCCCACCGGTCAAGCTCGGACTGGACCTCGGACAGTTTACGGAGCTTGCGGTGAGTGTGTTCCGGCCCAAGCCCCCCGAGCTGGTAGGCACGGACCACATCCACCAGGTTGCGGTTTCGGTGCCCGAGCAGGCCGGTCGGGTGCTCGATACCTTGCGGCTGGCAGGTAAAGATACCTGGTTGTCTTTTGCGACCCTCACCAGAGATTGCACCCACTCCATGGAAGTCATCGGTCGATTTCTCGCCTTGTTAGAGCTATACAAGGCCCGCGCGGTAGGCGTTGAGCAGGAAGAATCGCTGGGCGAGCTCAAGGTAGCCTGGACCGGAATTGAGGTGGATCCGGCGGTGGTGGCAGCTGCGAACTGGACCTAAACTGGTCGAGTATGAGCACACTACCTACCCCGCTTGTCGACGCCGCTTGGTTGATCGATCATCTAAATGATGAAGATCTAGTCGTCGTATGTGCGCTGAGCTCGCGCTCCGGCCGAATCCCGGACGCTGGCATCCCTGGCACTCGTATTGCCAACATCGAAGCGGAGTTTTCCGAACCCCACGCAGAGTTGCCCCATACGGCACCAACAAACCTGCAGGCGCCGTTCGAGCAGTTGGGGATCAGTTCCGATACGAAGGTAGTTATCTACGACAACCCCAAGGGATTTTTTGCTGCTCGCATCTGGTGGTTAGGTCTTGCTGCCGGCCTTGATCAGGTCGCGGTTCTGGATGGCGGCCTTGTCGCATGGGAAAAGGCTGGGGGAGAGTTGGCTCCATTCAATCTCAGCGCTCCGCTAGCGGGAAAGATCCAGTCTAAGCTCCGACCGCTCTTCGTCGACGCTGATGGGCTGGGGCTCGTGGTGGATGCGCGTTCCGCAGAACGGTTTGCGGGCACCGCCCCGGAGCCTCGACCCGGTCTGCGAGCGGGACATATCCCAGGCAGCGTGAATCTGCCTTATACCGAGGTCTTGAACGATGACGGCACTTTTCGAAGTCCAGTAGAACTGCAGGAGCTTTTCGCTGATTTCGGTAGCGACAACATGCACTTTAGCTGTGGCTCCGGTGTGACTGCCTGCATCGATGCGCTGGCGGCCACACTCGCAGGCTATAAAAACCTCAAAGTTTATGACGGGTCCTGGTCGGAGTGGGGTCGGCCAAATTCCGGCTTTGAGGTGGCCGAGGGTGATGCAGGCTAGCCATCAGTCTGGGGTGGATTAAGCTTGGTGTCCATGACACTTCCTGCTGTTTCCGTACTTAGATCCCAGGTGGAATCAATCCTGCTGGTGGTGGACACTCCAGTGAGCGTGGCAACTGTGGCTCGGGTCCTGGACGTGGATGAAGCGACAGTGCGCACTGTGTTGCAGCACATCGCAGCTGAGTTTGATTCTCGGGGAAACGGGTTTGACCTGCGCGAAACTGAGGAAGGGTGGCGGTTGTACACCCGAAAAGTTCATGCGACGGTCGTCGAAAAGCTGGTGTTGGATGGGGCGCAGTCCAAGCTGACGCGCGCGGCGTTGGAAACGCTGGCGGTGATCGCCTATCGGCAACCAGTGACTAGGGCGGCGGTGTCGGCGGTGCGTGGCGTGAATGTTGATGGGGTAATGCGGACTTTGGTCCAACGTGGCTTAATCCGCGAGGTCGAAACGGATGAGCCGACGCAGGCTAATTTCTATGAGACCACGCCACTATTCTTGGAGCAGCTTGGCATTGATTCTTTAGAACGGTTGCCGGATTTGGCGCCACTGCTGCCCGACATCGATTCGATTGACGAGGACTTTTAGTCGCTGGAAGCTTTGTTCCGCAGGTAGCGCTGCCAGAGCAGAAGTAAGGCGCCGAGTGTGAGGGTGACGAGTCCGGTTACTAAGAAGTAGGTGCGCTCTGCTGCGGCGTTTTCTGGGTCATAAAACCTGGAAAGCGCGCCCGATGCTGCCATACCGACGGCGAAATTCAGGAAATACAGCGCCGAAAACAACGTGCGGTGGGCGCTGGGTGCGCAAGTCGCGGTGGCTGCCATGCCGACGGGCCCAATGCACAATTCCCCGAGTGCGATGATCGCGGCGATCGCGCACATCACCACCAGCGGGGTGCTGTGTGGGCCTCCATCGCTTACGGGAACAAAGAGTAGAAACGCCACGGCGCTGGCGATAACACCCCAGGCCATGGTGCTGGCGGTGTGCGAGGCCTGCCTATGCAGGGCGGAGCGCAGCAAGGAAACCGGAATGGCGAGGGCCATGACCAAGATCGGGTTGAGGGTTTGGATCCAGGCCGCGGGGATCTCAAAACTGCCGACGTTTCGATTGAGTTTAAGATCGGCATAAACGGCAAACACACCGAAATTCTGGTAAGCCACCGACCAGAAGATGCATGCCGAGAGGAAAAGCGGCAGGAATCGCGTCAATTGACGTCGCTCGGCTGCGGTGGTCAAAGGGGATCGCCACAGGTAGCCAAACAACCCGACGATACTGAACAAGACAACCGCGAGCAGTCCGTTTGCCAGTGCGGAAATTGTCAGTGAGGTGCGCAGGGCGATGGCACCCAACAGTACCGAGCACACGATAGCGCTCGAGATGAGCGCGGTTACTTGGCTGCGTCGCAGTGGGGCGCGGGGGTTCAGCATCAGGTCGCGTTGCGCCGGGTTGAGCTCCGCCAACATGCGCGGCCTCAGCATTGCATAGCTGAAAACCCCGATTGCCATCAGGATGGCAGCGGCGAGAAATCCTAGTTGCCAGCTGTAGCGGTCGGCGAGGTAACCGGTGAGCAACGGCCCAAGCAGCGAACCAATTTGAATGCTCAGGTAAAACAGCTGAAAGCCGAAGTCCTTGCGTGCGGTCGCGTTGTGGCTATCTGCGGGATAGAGCTGGCCAAGGATAGTGATCGCGCAAGTCTTGATGAAGCCAGATCCGAGTCCAATCATGACCAGGCCGAAAGTTAGCCCGGTTGCCGTGTTGGTAAAGCTCAGGGTGGCATGGCCGACCATGACGGTTGTGGCGCCGGAGAGCAAGACACGCTCTGGCCCCCAAACCCGGTCTGCGAGGAAACCCCCGAGGATGCAGCACAGGTACACAAACGCGCCGTATGCACCGATGATCGCGGTGGCATCTTGCTTGCTGAGCCCTAGGCCGTCGTCCGCATAGAGATAAAAGACCAGGATGGCCTGCATGCCGTAGAAGCTGAATCGCTCCCACATCTCGATGCTCACCAGGGCGGGTAGGCCACGTGGTTGCGTGCGCCAAGGGGGAGCCGTTGTACCAAGCTCCGTGGCCGCGCTTAAACGTCGTTCAAGTTTGTGCATGACCATAATTAATAGCAGTTTTGCGAACGCAAGATTGGAGTTTAGGGTTAGTTTTTGAACATTGTTCAAGCGAGATTTGGTGAGGTTAACCCCTGATGGATAGTGCACAACTAATCGACATCGACCGTCAACTTATTTGGCACCCTTATAGCCCTTGTCCTAACCCCATGCTCGCGCTGCCTGTGGCATCCGCTCGGGGCACCCGCCTGACCTTGGCCGACGGCCGCGAGCTTATCGACGCCATGAGTTCCTGGTGGGCTGCAGCCCACGGCCATTCTCATCCCGCGCTCATAGCGGCAGCCACGAAGCAGATAAACACCATGAGCCATGTCATGTTCGGCGGATTGACCCACGAACCGGCCGTCGAGTTGGCGCAGCGTCTCACCGCGCTGACGGGCCTGGACAAGGTCTTCTACTCCGATTCGGGCTCTGTCGCCGTTGAAGTAGCGATCAAGATGGCGTTGCAATATCAGCGCGGGGCCGGGCAGGCGGGCCGAACTAAGCTGCTCACCTGGCGCGGCGGCTATCACGGCGATACTTTTGCACCCATGAGCGTGTGCGACCCAGAAGGCGGGATGCATGCGCTGTGGCGGGGTAGTATCGCTGAGCAAATATTCGCACCTCGCCCGCCTGACCGGGGAGCGGGCCAGGAGCACATTGACCAGTATCTAGCGGAGTTCGCTCGCCATATCGACGATACGGTGGCCGCGATAATTATTGAGCCCATCGTCCAAGGCGCAGGTGGGATGCGTTTTCACGACGCGGAGCTCCTGGTCGGGCTGCGTCAGTTGTGCGATGAACACGGTGTCCTGTTGATCGCCGATGAAATCGCTACTGGGTTTGGGCGCACTGGGCAGCTTTTCGCCACCACCGGAGCGGGGATCAAGCCAGACATCATGTGCTTGGGTAAGGCGCTAACCGGCGGATTTATGACATTCGCGGCCACATTAGCTTCGGATCGGGTGGCTGAGGCGATTAATCGTCGTGAAGCTGGGGGTGCTTTGATGCATGGCCCAACTTTCATGGCTAACCCGCTGGCTTGCGCCGTCGCCGTAGCAGCGGTGAAATTGGTGGAATCCGGACAATGGCGCGTACAAGTCCCGCGGATTGAAGCGGGTTTGAAGCGTGGTCTGGCACCTTTGCGCGATGAAGGCGCGGCACGAGCATGGGGGGTGCGGGATGTTCGTGTGCTCGGAGCGATCGGCGTTGTGGAGCTGGAAGAGTCAGTTGATATGGCTGCGACCACCAACGCGGCTGTTGAGGCCGGGGTGTGGATCCGACCGTTCGGGACGTTGATTTACGTCATGCCGCCCTTTATTTCCACGGATGAGGAAATCACTAAGATTTGTACTGCAGTGCAGTGCGCTGTCCAAGCGAACGCGGAGCAGAAAGGACACTAA
Protein sequences of DBSCAN-SWA_2 >NZ_CP011541|1227641:1234815|1233510_1234815_+|WP_047240145.1|DBSCAN-SWA MDSAQLIDIDRQLIWHPYSPCPNPMLALPVASARGTRLTLADGRELIDAMSSWWAAAHGHSHPALIAAATKQINTMSHVMFGGLTHEPAVELAQRLTALTGLDKVFYSDSGSVAVEVAIKMALQYQRGAGQAGRTKLLTWRGGYHGDTFAPMSVCDPEGGMHALWRGSIAEQIFAPRPPDRGAGQEHIDQYLAEFARHIDDTVAAIIIEPIVQGAGGMRFHDAELLVGLRQLCDEHGVLLIADEIATGFGRTGQLFATTGAGIKPDIMCLGKALTGGFMTFAATLASDRVAEAINRREAGGALMHGPTFMANPLACAVAVAAVKLVESGQWRVQVPRIEAGLKRGLAPLRDEGAARAWGVRDVRVLGAIGVVELEESVDMAATTNAAVEAGVWIRPFGTLIYVMPPFISTDEEITKICTAVQCAVQANAEQKGH >NZ_CP011541|1227641:1234815|1231900_1233415_-|WP_158408028.1|DBSCAN-SWA MHKLERRLSAATELGTTAPPWRTQPRGLPALVSIEMWERFSFYGMQAILVFYLYADDGLGLSKQDATAIIGAYGAFVYLCCILGGFLADRVWGPERVLLSGATTVMVGHATLSFTNTATGLTFGLVMIGLGSGFIKTCAITILGQLYPADSHNATARKDFGFQLFYLSIQIGSLLGPLLTGYLADRYSWQLGFLAAAILMAIGVFSYAMLRPRMLAELNPAQRDLMLNPRAPLRRSQVTALISSAIVCSVLLGAIALRTSLTISALANGLLAVVLFSIVGLFGYLWRSPLTTAAERRQLTRFLPLFLSACIFWSVAYQNFGVFAVYADLKLNRNVGSFEIPAAWIQTLNPILVMALAIPVSLLRSALHRQASHTASTMAWGVIASAVAFLLFVPVSDGGPHSTPLVVMCAIAAIIALGELCIGPVGMAATATCAPSAHRTLFSALYFLNFAVGMAASGALSRFYDPENAAAERTYFLVTGLVTLTLGALLLLWQRYLRNKASSD >NZ_CP011541|1227641:1234815|1228772_1229648_+|WP_047240140.1|DBSCAN-SWA MADSDQDAALFESPELGLTGRPVRDIPEPAPLATHGPAHIIAMCNQKGGVGKTTSTINLGACLAEAGRKVLLVDLDPQGALSAGLGVPHDELDITVYNLLVDSRASIFSAIHRTNVAGLDLVPANIDLSAAEIQLVNEVGREQTLARVLRPVMKDYDYIILDCQPSLGLLTVNALSCAQGVIIPMECEYFSLRGLALLTDTVEKVRDRLNFNLETLGILVTMFDRRTSHAREVMSRVVEVFGDQVFDTVITRTVRFPETSVAGEPIITWAPKSQGAEQYRNLAREVIERTA >NZ_CP011541|1227641:1234815|1231352_1231904_+|WP_047240143.1|DBSCAN-SWA MTLPAVSVLRSQVESILLVVDTPVSVATVARVLDVDEATVRTVLQHIAAEFDSRGNGFDLRETEEGWRLYTRKVHATVVEKLVLDGAQSKLTRAALETLAVIAYRQPVTRAAVSAVRGVNVDGVMRTLVQRGLIREVETDEPTQANFYETTPLFLEQLGIDSLERLPDLAPLLPDIDSIDEDF >NZ_CP011541|1227641:1234815|1230515_1231319_+|WP_047240142.1|DBSCAN-SWA MSTLPTPLVDAAWLIDHLNDEDLVVVCALSSRSGRIPDAGIPGTRIANIEAEFSEPHAELPHTAPTNLQAPFEQLGISSDTKVVIYDNPKGFFAARIWWLGLAAGLDQVAVLDGGLVAWEKAGGELAPFNLSAPLAGKIQSKLRPLFVDADGLGLVVDARSAERFAGTAPEPRPGLRAGHIPGSVNLPYTEVLNDDGTFRSPVELQELFADFGSDNMHFSCGSGVTACIDALAATLAGYKNLKVYDGSWSEWGRPNSGFEVAEGDAG >NZ_CP011541|1227641:1234815|1227641_1228556_+|WP_047240139.1|DBSCAN-SWA MTDPAVIAEQWLSHLAVERGLSANTLSNYRRDIARYLGWLSEIGRTDFSKVSTTDIENYVAELRRADPDTERKPLSAASAGRALVVARGLHKFAVAEGALEVDVAAEVSPPQVGKHLPDTLSIDEVAALIEKTPTDTAVGVRDRALLELLYGTGMRVSEAVGLLVDDLTQQDGVLKITGKGNKQRIVPVGTHAQEAMEAYLVRARPALSQGKTHAAFLNTRGGALSRQSAWGIIKAAAERAGIAKEISPHTLRHSYATHLLQGGADVRVVQELLGHSSVTTTQIYTHVSANNLRAVWASSHPRA >NZ_CP011541|1227641:1234815|1229694_1230504_+|WP_047240141.1|DBSCAN-SWA MPAETEQPEITGFQVALRNFSGPFDLLLQLISAKKLDITDIALAEVTDEFISYTKALGETAELDVITEFIVIASTLLDLKAARLIPRGEVEDEEDLALLETRDLLFAKLLQYKAYKQVATMFAEWQRRAQRSYPRAVSLEPQFVGLLPPVKLGLDLGQFTELAVSVFRPKPPELVGTDHIHQVAVSVPEQAGRVLDTLRLAGKDTWLSFATLTRDCTHSMEVIGRFLALLELYKARAVGVEQEESLGELKVAWTGIEVDPAVVAAANWT |
7 | uncultured_Mediterranean_phage(33.33%) | NA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
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