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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011541 Corynebacterium epidermidicanis strain DSM 45586 chromosome, complete genome 5 crisprs csa3,cas3,DEDDh,WYL,cas4,DinG 5 4 2 0

Results visualization

1. NZ_CP011541
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011541_1 457186-457521 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011541_2 924492-925013 Orphan NA
9 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011541_3 2310018-2310136 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011541_4 2402375-2402672 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011541_5 2574532-2574617 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP011541_2 2.5|924768|33|NZ_CP011541|CRT 924768-924800 33 NZ_CP011541.1 924483-924515 0 1.0
NZ_CP011541_2 2.9|924963|33|NZ_CP011541|CRT 924963-924995 33 NZ_CP011541.1 924483-924515 0 1.0
NZ_CP011541_2 2.3|924657|54|NZ_CP011541|CRT 924657-924710 54 NZ_CP011541.1 924462-924515 1 0.981
NZ_CP011541_2 2.6|924819|18|NZ_CP011541|CRT 924819-924836 18 NZ_CP011541.1 1631984-1632001 1 0.944
NZ_CP011541_2 2.7|924855|33|NZ_CP011541|CRT 924855-924887 33 NZ_CP011541.1 924483-924515 1 0.97

1. spacer 2.5|924768|33|NZ_CP011541|CRT matches to position: 924483-924515, mismatch: 0, identity: 1.0

gggcgccgggtctgtggtggtggcagtcgttgt	CRISPR spacer
gggcgccgggtctgtggtggtggcagtcgttgt	Protospacer
*********************************

2. spacer 2.9|924963|33|NZ_CP011541|CRT matches to position: 924483-924515, mismatch: 0, identity: 1.0

gggcgccgggtctgtggtggtggcagtcgttgt	CRISPR spacer
gggcgccgggtctgtggtggtggcagtcgttgt	Protospacer
*********************************

3. spacer 2.3|924657|54|NZ_CP011541|CRT matches to position: 924462-924515, mismatch: 1, identity: 0.981

tggttccgtggtggtggctgcgggcgccgggtctgtggtggtagcagtcgttgt	CRISPR spacer
tggttccgtggtggtggctgcgggcgccgggtctgtggtggtggcagtcgttgt	Protospacer
******************************************.***********

4. spacer 2.6|924819|18|NZ_CP011541|CRT matches to position: 1631984-1632001, mismatch: 1, identity: 0.944

ttcggtggtggctgctgg	CRISPR spacer
ttcggtggtagctgctgg	Protospacer
*********.********

5. spacer 2.7|924855|33|NZ_CP011541|CRT matches to position: 924483-924515, mismatch: 1, identity: 0.97

gggcgccgggtctgtggtggtagcagtcgttgt	CRISPR spacer
gggcgccgggtctgtggtggtggcagtcgttgt	Protospacer
*********************.***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011541_1 1.2|457276|32|NZ_CP011541|CRISPRCasFinder 457276-457307 32 KJ567041 Mycobacterium phage Zapner, complete genome 36422-36453 5 0.844
NZ_CP011541_1 1.2|457276|32|NZ_CP011541|CRISPRCasFinder 457276-457307 32 NC_022069 Mycobacterium phage Jabbawokkie, complete genome 36421-36452 5 0.844
NZ_CP011541_1 1.4|457399|32|NZ_CP011541|CRISPRCasFinder 457399-457430 32 NZ_CP017076 Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence 763194-763225 7 0.781
NZ_CP011541_1 1.1|457215|32|NZ_CP011541|CRISPRCasFinder 457215-457246 32 NZ_CP014508 Burkholderia sp. PAMC 28687 plasmid 1, complete sequence 183815-183846 9 0.719
NZ_CP011541_1 1.1|457215|32|NZ_CP011541|CRISPRCasFinder 457215-457246 32 NZ_CP014310 Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence 519178-519209 9 0.719
NZ_CP011541_1 1.5|457460|33|NZ_CP011541|CRISPRCasFinder 457460-457492 33 GQ452243 Enterococcus phage phiEf11, complete genome 30056-30088 9 0.727
NZ_CP011541_1 1.5|457460|33|NZ_CP011541|CRISPRCasFinder 457460-457492 33 NC_028671 Enterococcus phage vB_EfaS_IME197, complete genome 28796-28828 9 0.727
NZ_CP011541_1 1.5|457460|33|NZ_CP011541|CRISPRCasFinder 457460-457492 33 CP002962 Emticicia oligotrophica DSM 17448 plasmid pEMTOL01, complete sequence 172769-172801 10 0.697

1. spacer 1.2|457276|32|NZ_CP011541|CRISPRCasFinder matches to KJ567041 (Mycobacterium phage Zapner, complete genome) position: , mismatch: 5, identity: 0.844

gcttcccatctccgggaagctttcgggaaaac	CRISPR spacer
gcttcccggctccgggaagctttcggcaggac	Protospacer
*******. ***************** *..**

2. spacer 1.2|457276|32|NZ_CP011541|CRISPRCasFinder matches to NC_022069 (Mycobacterium phage Jabbawokkie, complete genome) position: , mismatch: 5, identity: 0.844

gcttcccatctccgggaagctttcgggaaaac	CRISPR spacer
gcttcccggctccgggaagctttcggcaggac	Protospacer
*******. ***************** *..**

3. spacer 1.4|457399|32|NZ_CP011541|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 7, identity: 0.781

cgatgacgtaagccaggctgacgtcaccgatc	CRISPR spacer
cgttcgcgtaagccaggttgacgtaaccggac	Protospacer
** * .***********.****** ****. *

4. spacer 1.1|457215|32|NZ_CP011541|CRISPRCasFinder matches to NZ_CP014508 (Burkholderia sp. PAMC 28687 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

tacggctcactggattcccaagatcttgggaa	CRISPR spacer
tgacccggactggcttcccgagatcttgggac	Protospacer
*.   *  ***** *****.*********** 

5. spacer 1.1|457215|32|NZ_CP011541|CRISPRCasFinder matches to NZ_CP014310 (Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tacggctcactggattcccaagatcttgggaa	CRISPR spacer
tgacccggactggcttcccgagatcttgggac	Protospacer
*.   *  ***** *****.*********** 

6. spacer 1.5|457460|33|NZ_CP011541|CRISPRCasFinder matches to GQ452243 (Enterococcus phage phiEf11, complete genome) position: , mismatch: 9, identity: 0.727

ggatttctcggaaatttccgataaaccctccga	CRISPR spacer
cagtttctcggaaaaatccgataaaccttttgg	Protospacer
 ..***********  ***********.*..*.

7. spacer 1.5|457460|33|NZ_CP011541|CRISPRCasFinder matches to NC_028671 (Enterococcus phage vB_EfaS_IME197, complete genome) position: , mismatch: 9, identity: 0.727

ggatttctcggaaatttccgataaaccctccga	CRISPR spacer
cagtttctcggaaaaatccgataaaccttttgg	Protospacer
 ..***********  ***********.*..*.

8. spacer 1.5|457460|33|NZ_CP011541|CRISPRCasFinder matches to CP002962 (Emticicia oligotrophica DSM 17448 plasmid pEMTOL01, complete sequence) position: , mismatch: 10, identity: 0.697

ggatttctcggaaatttccgataaaccctccga	CRISPR spacer
tgatttgtcggaaatttccgacaaattattttc	Protospacer
 ***** **************.***.. *..  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1156427 : 1163244 9 Enterobacteria_phage(33.33%) transposase NA
DBSCAN-SWA_2 1227641 : 1234815 7 uncultured_Mediterranean_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage