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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP026077 Staphylococcus aureus strain FDAARGOS_7 chromosome, complete genome 10 crisprs WYL,cas3,DEDDh,DinG,csa3 10 3 6 1
NZ_CP026078 Staphylococcus aureus strain FDAARGOS_7 plasmid unnamed 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP026077
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_1 130791-130880 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_2 254718-254911 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_3 1119519-1119619 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_4 1354806-1354898 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_5 1417933-1418031 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_6 1560162-1560243 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_7 1609017-1609299 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_8 1742700-1742787 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_9 2479050-2479260 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026077_10 2635833-2635911 Orphan NA
1 spacers
DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP026077_2 2.2|254797|36|NZ_CP026077|CRT 254797-254832 36 NZ_CP026077.1 1827145-1827180 0 1.0
NZ_CP026077_6 6.1|1560186|34|NZ_CP026077|CRISPRCasFinder 1560186-1560219 34 NZ_CP026077.1 2035353-2035386 0 1.0
NZ_CP026077_6 6.1|1560186|34|NZ_CP026077|CRISPRCasFinder 1560186-1560219 34 NZ_CP026077.1 2123795-2123828 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 446562-446581 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 697124-697143 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 854943-854962 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 998141-998160 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1081037-1081056 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1511441-1511460 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1511496-1511515 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1517101-1517120 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1517159-1517178 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1517217-1517236 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1560240-1560259 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1628698-1628717 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1752683-1752702 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 2035254-2035273 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 2123908-2123927 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 2300271-2300290 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 2478974-2478993 0 1.0
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 2637263-2637282 0 1.0
NZ_CP026077_2 2.2|254797|36|NZ_CP026077|CRT 254797-254832 36 NZ_CP026077.1 2478970-2479005 1 0.972
NZ_CP026077_7 7.1|1609047|26|NZ_CP026077|CRT 1609047-1609072 26 NZ_CP026077.1 1516886-1516911 1 0.962
NZ_CP026077_7 7.1|1609047|26|NZ_CP026077|CRT 1609047-1609072 26 NZ_CP026077.1 1608991-1609016 1 0.962
NZ_CP026077_7 7.3|1609161|26|NZ_CP026077|CRT 1609161-1609186 26 NZ_CP026077.1 1516942-1516967 1 0.962
NZ_CP026077_7 7.3|1609161|26|NZ_CP026077|CRT 1609161-1609186 26 NZ_CP026077.1 1516998-1517023 1 0.962
NZ_CP026077_9 9.1|2479088|21|NZ_CP026077|CRT 2479088-2479108 21 NZ_CP026077.1 2479029-2479049 1 0.952
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 998195-998214 1 0.95
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1524307-1524326 1 0.95
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1827149-1827168 1 0.95
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 2084580-2084599 1 0.95
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 2334237-2334256 1 0.95
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 2646612-2646631 1 0.95
NZ_CP026077_9 9.3|2479205|18|NZ_CP026077|CRT 2479205-2479222 18 NZ_CP026077.1 2479032-2479049 1 0.944
NZ_CP026077_10 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder 2635856-2635888 33 NZ_CP026077.1 531749-531781 1 0.97
NZ_CP026077_10 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder 2635856-2635888 33 NZ_CP026077.1 1516922-1516954 1 0.97
NZ_CP026077_10 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder 2635856-2635888 33 NZ_CP026077.1 1516978-1517010 1 0.97
NZ_CP026077_10 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder 2635856-2635888 33 NZ_CP026077.1 2035308-2035340 1 0.97
NZ_CP026077_10 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder 2635856-2635888 33 NZ_CP026077.1 2300320-2300352 1 0.97
NZ_CP026077_2 2.1|254741|33|NZ_CP026077|CRT 254741-254773 33 NZ_CP026077.1 531749-531781 2 0.939
NZ_CP026077_2 2.1|254741|33|NZ_CP026077|CRT 254741-254773 33 NZ_CP026077.1 1516922-1516954 2 0.939
NZ_CP026077_2 2.1|254741|33|NZ_CP026077|CRT 254741-254773 33 NZ_CP026077.1 1516978-1517010 2 0.939
NZ_CP026077_2 2.1|254741|33|NZ_CP026077|CRT 254741-254773 33 NZ_CP026077.1 2035308-2035340 2 0.939
NZ_CP026077_2 2.1|254741|33|NZ_CP026077|CRT 254741-254773 33 NZ_CP026077.1 2123841-2123873 2 0.939
NZ_CP026077_2 2.2|254797|36|NZ_CP026077|CRT 254797-254832 36 NZ_CP026077.1 2300259-2300294 2 0.944
NZ_CP026077_2 2.2|254797|36|NZ_CP026077|CRT 254797-254832 36 NZ_CP026077.1 2646600-2646635 2 0.944
NZ_CP026077_2 2.3|254856|33|NZ_CP026077|CRT 254856-254888 33 NZ_CP026077.1 531749-531781 2 0.939
NZ_CP026077_2 2.3|254856|33|NZ_CP026077|CRT 254856-254888 33 NZ_CP026077.1 1516866-1516898 2 0.939
NZ_CP026077_2 2.3|254856|33|NZ_CP026077|CRT 254856-254888 33 NZ_CP026077.1 1516922-1516954 2 0.939
NZ_CP026077_2 2.3|254856|33|NZ_CP026077|CRT 254856-254888 33 NZ_CP026077.1 1516978-1517010 2 0.939
NZ_CP026077_2 2.3|254856|33|NZ_CP026077|CRT 254856-254888 33 NZ_CP026077.1 2035308-2035340 2 0.939
NZ_CP026077_7 7.1|1609047|26|NZ_CP026077|CRT 1609047-1609072 26 NZ_CP026077.1 697024-697049 2 0.923
NZ_CP026077_7 7.1|1609047|26|NZ_CP026077|CRT 1609047-1609072 26 NZ_CP026077.1 697080-697105 2 0.923
NZ_CP026077_7 7.1|1609047|26|NZ_CP026077|CRT 1609047-1609072 26 NZ_CP026077.1 1480306-1480331 2 0.923
NZ_CP026077_7 7.1|1609047|26|NZ_CP026077|CRT 1609047-1609072 26 NZ_CP026077.1 1827187-1827212 2 0.923
NZ_CP026077_7 7.3|1609161|26|NZ_CP026077|CRT 1609161-1609186 26 NZ_CP026077.1 1080906-1080931 2 0.923
NZ_CP026077_9 9.2|2479147|20|NZ_CP026077|CRT 2479147-2479166 20 NZ_CP026077.1 1484906-1484925 2 0.9
NZ_CP026077_10 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder 2635856-2635888 33 NZ_CP026077.1 2123841-2123873 2 0.939

1. spacer 2.2|254797|36|NZ_CP026077|CRT matches to position: 1827145-1827180, mismatch: 0, identity: 1.0

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttctttttgaaattctcta	Protospacer
************************************

2. spacer 6.1|1560186|34|NZ_CP026077|CRISPRCasFinder matches to position: 2035353-2035386, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

3. spacer 6.1|1560186|34|NZ_CP026077|CRISPRCasFinder matches to position: 2123795-2123828, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

4. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 446562-446581, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

5. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 697124-697143, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

6. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 854943-854962, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

7. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 998141-998160, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

8. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1081037-1081056, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

9. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1511441-1511460, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

10. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1511496-1511515, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

11. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1517101-1517120, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

12. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1517159-1517178, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

13. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1517217-1517236, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

14. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1560240-1560259, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

15. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1628698-1628717, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

16. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1752683-1752702, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

17. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 2035254-2035273, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

18. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 2123908-2123927, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

19. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 2300271-2300290, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

20. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 2478974-2478993, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

21. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 2637263-2637282, mismatch: 0, identity: 1.0

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaagaaattct	Protospacer
********************

22. spacer 2.2|254797|36|NZ_CP026077|CRT matches to position: 2478970-2479005, mismatch: 1, identity: 0.972

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaattctcta	Protospacer
************************.***********

23. spacer 7.1|1609047|26|NZ_CP026077|CRT matches to position: 1516886-1516911, mismatch: 1, identity: 0.962

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*****************.********

24. spacer 7.1|1609047|26|NZ_CP026077|CRT matches to position: 1608991-1609016, mismatch: 1, identity: 0.962

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaggctggtgg	Protospacer
***********************.**

25. spacer 7.3|1609161|26|NZ_CP026077|CRT matches to position: 1516942-1516967, mismatch: 1, identity: 0.962

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacacagaagctgacga	Protospacer
**********************.***

26. spacer 7.3|1609161|26|NZ_CP026077|CRT matches to position: 1516998-1517023, mismatch: 1, identity: 0.962

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacacagaagctgacga	Protospacer
**********************.***

27. spacer 9.1|2479088|21|NZ_CP026077|CRT matches to position: 2479029-2479049, mismatch: 1, identity: 0.952

agctggccaatagtcagcttt	CRISPR spacer
agctggccaatagttagcttt	Protospacer
**************.******

28. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 998195-998214, mismatch: 1, identity: 0.95

gaatttcgaaaagaaattct	CRISPR spacer
gaaattcgaaaagaaattct	Protospacer
*** ****************

29. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1524307-1524326, mismatch: 1, identity: 0.95

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaatgaaattct	Protospacer
*********** ********

30. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1827149-1827168, mismatch: 1, identity: 0.95

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcaaaaagaaattct	Protospacer
*******.************

31. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 2084580-2084599, mismatch: 1, identity: 0.95

gaatttcgaaaagaaattct	CRISPR spacer
gattttcgaaaagaaattct	Protospacer
** *****************

32. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 2334237-2334256, mismatch: 1, identity: 0.95

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgtaaagaaattct	Protospacer
******** ***********

33. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 2646612-2646631, mismatch: 1, identity: 0.95

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcgaaaggaaattct	Protospacer
***********.********

34. spacer 9.3|2479205|18|NZ_CP026077|CRT matches to position: 2479032-2479049, mismatch: 1, identity: 0.944

tggccaatagtcagcttt	CRISPR spacer
tggccaatagttagcttt	Protospacer
***********.******

35. spacer 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder matches to position: 531749-531781, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

36. spacer 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder matches to position: 1516922-1516954, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

37. spacer 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder matches to position: 1516978-1517010, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

38. spacer 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder matches to position: 2035308-2035340, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

39. spacer 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder matches to position: 2300320-2300352, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattatagtaagctgacttttcgtcagcttctg	Protospacer
****** **************************

40. spacer 2.1|254741|33|NZ_CP026077|CRT matches to position: 531749-531781, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

41. spacer 2.1|254741|33|NZ_CP026077|CRT matches to position: 1516922-1516954, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

42. spacer 2.1|254741|33|NZ_CP026077|CRT matches to position: 1516978-1517010, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

43. spacer 2.1|254741|33|NZ_CP026077|CRT matches to position: 2035308-2035340, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

44. spacer 2.1|254741|33|NZ_CP026077|CRT matches to position: 2123841-2123873, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
********** ***************.******

45. spacer 2.2|254797|36|NZ_CP026077|CRT matches to position: 2300259-2300294, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaattctcta	Protospacer
*******.****************.***********

46. spacer 2.2|254797|36|NZ_CP026077|CRT matches to position: 2646600-2646635, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaattctcta	Protospacer
********************.***.***********

47. spacer 2.3|254856|33|NZ_CP026077|CRT matches to position: 531749-531781, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

48. spacer 2.3|254856|33|NZ_CP026077|CRT matches to position: 1516866-1516898, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgactttccgccagcttctg	Protospacer
*********************.*.*********

49. spacer 2.3|254856|33|NZ_CP026077|CRT matches to position: 1516922-1516954, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

50. spacer 2.3|254856|33|NZ_CP026077|CRT matches to position: 1516978-1517010, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

51. spacer 2.3|254856|33|NZ_CP026077|CRT matches to position: 2035308-2035340, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

52. spacer 7.1|1609047|26|NZ_CP026077|CRT matches to position: 697024-697049, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
*************.***.********

53. spacer 7.1|1609047|26|NZ_CP026077|CRT matches to position: 697080-697105, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacaaagaagctggcgg	Protospacer
************* ***.********

54. spacer 7.1|1609047|26|NZ_CP026077|CRT matches to position: 1480306-1480331, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaagcaggcgg	Protospacer
*****************.** *****

55. spacer 7.1|1609047|26|NZ_CP026077|CRT matches to position: 1827187-1827212, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
*************.***.********

56. spacer 7.3|1609161|26|NZ_CP026077|CRT matches to position: 1080906-1080931, mismatch: 2, identity: 0.923

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacaaagaagctgacga	Protospacer
************* ********.***

57. spacer 9.2|2479147|20|NZ_CP026077|CRT matches to position: 1484906-1484925, mismatch: 2, identity: 0.9

gaatttcgaaaagaaattct	CRISPR spacer
gaatttcaaaaaggaattct	Protospacer
*******.*****.******

58. spacer 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder matches to position: 2123841-2123873, mismatch: 2, identity: 0.939

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
******.******************* ******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP026077_7 7.4|1609217|53|NZ_CP026077|CRT 1609217-1609269 53 MG543995 Staphylococcus phage UPMK_1, partial genome 76246-76298 4 0.925
NZ_CP026077_7 7.3|1609161|26|NZ_CP026077|CRT 1609161-1609186 26 NZ_CP022541 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence 333735-333760 5 0.808
NZ_CP026077_10 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder 2635856-2635888 33 NC_021536 Synechococcus phage S-IOM18 genomic sequence 159745-159777 10 0.697

1. spacer 7.4|1609217|53|NZ_CP026077|CRT matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 4, identity: 0.925

ggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccaa	CRISPR spacer
ggtgggacgacgaaataaattttgagaaactatcatttctgtcccactccctt	Protospacer
************************ **** *********************  

2. spacer 7.3|1609161|26|NZ_CP026077|CRT matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

cggggccccaacacagaagctggcga	CRISPR spacer
taaggcctcaacacagaagctggcgt	Protospacer
...****.***************** 

3. spacer 10.1|2635856|33|NZ_CP026077|CRISPRCasFinder matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 10, identity: 0.697

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
ttttatcgtaaggtgagttttcgtcaagcacct	Protospacer
. ********** *** *********. . *. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1448997 : 1456817 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 1468789 : 1483520 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 1727924 : 1736397 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 2271881 : 2280193 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_5 2349331 : 2358374 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_6 2484147 : 2565635 77 Staphylococcus_phage(93.44%) tRNA,protease,transposase NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP026077.1|WP_001790641.1|1472372_1472474_+|hypothetical-protein 1472372_1472474_+ 33 aa aa NA NA NA 1468789-1483520 yes