CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011378	Moraxella bovoculi strain 28389, complete genome	1 crisprs	cas12a,cas4,cas1,cas2,cas14j,c2c9_V-U4,cas3,DEDDh,WYL	7	9	8	7

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011378_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011378_1

50580-51504

TypeI-A,TypeV-A

Consensus_repeat	Method
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	PILER-CR
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CRISPRCasFinder
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CRT

14 spacers

cas2,cas1,cas4,cas12a,csa3

The CRISPR arrays of NZ_CP011378_1

>merge|NZ_CP011378|1|50580-51504|PILER-CR,CRISPRCasFinder,CRT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATTTTAGAAATCACGGATCATTATATATGTGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATTCAAAAATGGTAGCATTTGTTAAGAATGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATATTGATGTAAACATCGATGGTGTGGTTGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATCCCATCAAGGCTTCAATATCATCGTGCGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATATGAAATAGAGCAACAGCAGAACGGTAGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATTGCAGGTGGTGAATCAGCGACACATTCGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATCCTCCTCAATTAGCCTTGCAAAATGATATGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATTCATGGCGTAGTTGCTACGCTGTAATGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATTGGGAATATTATAGCAGATTTATTTAATTGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATAAGCGGTTCACAAAAACCACTCATTAAGGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATCTAAATGCCGTGTCGTTTTGGTTCTTATGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATCTGTGGCTTTCATGTCACACCTCTCAGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATGGAACCTGTTCGCCGCTTGGATGTTACGTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATGTCTTGGATAGTATGCAGTCGCATCAGCGGTCTAACGACCTTTTAAATTTCTACTGTTCTTTTAA

>NZ_CP011378|1|1|50580-51439|PILER-CR
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TTTAGAAATCACGGATCATTATATATGT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TCAAAAATGGTAGCATTTGTTAAGAAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	ATTGATGTAAACATCGATGGTGTGGTT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CCCATCAAGGCTTCAATATCATCGTGC
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	ATGAAATAGAGCAACAGCAGAACGGTA
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TGCAGGTGGTGAATCAGCGACACATTC
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CCTCCTCAATTAGCCTTGCAAAATGATAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TCATGGCGTAGTTGCTACGCTGTAAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TGGGAATATTATAGCAGATTTATTTAATT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	AAGCGGTTCACAAAAACCACTCATTAAG
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CTAAATGCCGTGTCGTTTTGGTTCTTAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CTGTGGCTTTCATGTCACACCTCTCA
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	GGAACCTGTTCGCCGCTTGGATGTTAC
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT

>NZ_CP011378|1|1|50580-51504|CRISPRCasFinder
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TTTAGAAATCACGGATCATTATATATGT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TCAAAAATGGTAGCATTTGTTAAGAAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	ATTGATGTAAACATCGATGGTGTGGTT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CCCATCAAGGCTTCAATATCATCGTGC
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	ATGAAATAGAGCAACAGCAGAACGGTA
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TGCAGGTGGTGAATCAGCGACACATTC
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CCTCCTCAATTAGCCTTGCAAAATGATAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TCATGGCGTAGTTGCTACGCTGTAAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TGGGAATATTATAGCAGATTTATTTAATT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	AAGCGGTTCACAAAAACCACTCATTAAG
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CTAAATGCCGTGTCGTTTTGGTTCTTAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CTGTGGCTTTCATGTCACACCTCTCA
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	GGAACCTGTTCGCCGCTTGGATGTTAC
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	GTCTTGGATAGTATGCAGTCGCATCAGCG
GTCTAACGACCTTTTAAATTTCTACTGTTCTTTTAA

>NZ_CP011378|1|1|50580-51504|CRT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TTTAGAAATCACGGATCATTATATATGT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TCAAAAATGGTAGCATTTGTTAAGAAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	ATTGATGTAAACATCGATGGTGTGGTT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CCCATCAAGGCTTCAATATCATCGTGC
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	ATGAAATAGAGCAACAGCAGAACGGTA
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TGCAGGTGGTGAATCAGCGACACATTC
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CCTCCTCAATTAGCCTTGCAAAATGATAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TCATGGCGTAGTTGCTACGCTGTAAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	TGGGAATATTATAGCAGATTTATTTAATT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	AAGCGGTTCACAAAAACCACTCATTAAG
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CTAAATGCCGTGTCGTTTTGGTTCTTAT
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	CTGTGGCTTTCATGTCACACCTCTCA
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	GGAACCTGTTCGCCGCTTGGATGTTAC
GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	GTCTTGGATAGTATGCAGTCGCATCAGCG
GTCTAACGACCTTTTAAATTTCTACTGTTCTTTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011378.1\|WP_046695848.1\|64285_64642_+\|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein	unknown	unknown	gnl\|CDD\|239574
NZ_CP011378.1\|WP_046699068.1\|58125_58860_-\|two-component-system-response-regulator-OmpR	unknown	unknown	gnl\|CDD\|181883
NZ_CP011378.1\|WP_046695839.1\|50128_50398_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP011378.1\|WP_080945868.1\|48535_49090_+\|type-V-CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|213941
NZ_CP011378.1\|WP_080945869.1\|49103_50132_+\|type-V-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|213942
NZ_CP011378.1\|WP_080702176.1\|63896_64286_+\|succinate-dehydrogenase,-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|181900
NZ_CP011378.1\|WP_046695844.1\|56980_58072_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|275201
NZ_CP011378.1\|WP_046699065.1\|39796_40786_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NZ_CP011378.1\|WP_080945867.1\|41361_42264_+\|pseudouridylate-synthase	unknown	unknown	gnl\|CDD\|211332
NZ_CP011378.1\|WP_046695837.1\|43157_44369_+\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
NZ_CP011378.1\|WP_046695836.1\|42380_42881_+\|putative-4-hydroxy-4-methyl-2-oxoglutarate-aldolase	unknown	unknown	gnl\|CDD\|236487
NZ_CP011378.1\|WP_046695842.1\|54000_55503_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP011378.1\|WP_046695843.1\|55775_56984_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|275200
NZ_CP011378.1\|WP_046695846.1\|59135_61523_+\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP011378.1\|WP_080947458.1\|39073_39577_+\|DUF4442-domain-containing-protein	unknown	unknown	gnl\|CDD\|370533
NZ_CP011378.1\|WP_046699067.1\|52657_53854_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_CP011378.1\|WP_046699066.1\|44703_48489_+\|type-V-CRISPR-associated-protein-Cas12a/Cpf1	cas12a	cas12a_cpf1_CAS-V-A	gnl\|CDD\|275131
NZ_CP011378.1\|WP_046695840.1\|51652_52564_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
NZ_CP011378.1\|WP_046695847.1\|61695_62970_-\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164
NZ_CP011378.1\|WP_046695835.1\|40899_41214_-\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|223713

Protein	Function_ID	Function_description	E-value
NZ_CP011378.1\|WP_046695848.1\|64285_64642_+\|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein	gnl\|CDD\|239574	cd03494, SQR_TypeC_SdhD, Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. E. coli SQR, a member of this subfamily, reduces the high potential quinine, ubiquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type C SQRs because they contain two transmembrane subunits and one heme group. SdhD and SdhC are the two transmembrane proteins of bacterial SQRs. They contain heme and quinone binding sites. The two-electron oxidation of succinate in the flavoprotein active site is coupled to the two-electron reduction of quinone in the membrane anchor subunits via electron transport through FAD and three iron-sulfur centers. The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	2.52414e-31
NZ_CP011378.1\|WP_046699068.1\|58125_58860_-\|two-component-system-response-regulator-OmpR	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	1.10562e-162
NZ_CP011378.1\|WP_046695839.1\|50128_50398_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	1.09985e-14
NZ_CP011378.1\|WP_080945868.1\|48535_49090_+\|type-V-CRISPR-associated-protein-Cas4	gnl\|CDD\|213941	TIGR04328, hypothetical_protein_HMPREF9709_01098, CRISPR-associated protein Cas4, subtype PREFRAN. Members of this family are the Cas4 protein of a novel CRISPR subtype, PREFRAN, found in Prevotella bryantii B14, Prevotella disiens FB035-09AN, Francisella tularensis subsp. novicida, Francisella philomiragia, Butyrivibrio proteoclasticus B316, Helcococcus kunzii ATCC 51366, etc.	9.25579e-70
NZ_CP011378.1\|WP_080945869.1\|49103_50132_+\|type-V-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|213942	TIGR04329, hypothetical_protein_SbacW_07302_partial, CRISPR-associated endonuclease Cas1, subtype PREFRAN. Members of this family are the Cas1 endonuclease of a novel CRISPR subtype, PREFRAN, found in Prevotella bryantii B14, Prevotella disiens FB035-09AN, Francisella tularensis subsp. novicida, Francisella philomiragia, Butyrivibrio proteoclasticus B316, Helcococcus kunzii ATCC 51366, etc.	4.68174e-108
NZ_CP011378.1\|WP_080702176.1\|63896_64286_+\|succinate-dehydrogenase,-cytochrome-b556-subunit	gnl\|CDD\|181900	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit.	1.42495e-26
NZ_CP011378.1\|WP_046695844.1\|56980_58072_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|275201	TIGR04408, LptG_lptG, LPS export ABC transporter permease LptG. Members of this family are LptG, one of homologous, two tandem-encoded permease genes of an export ATP transporter for lipopolysaccharide (LPS) assembly in most Gram-negative bacteria. The other permease subunit is LptF (TIGR04407). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	2.4888e-88
NZ_CP011378.1\|WP_046699065.1\|39796_40786_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	1.22807e-164
NZ_CP011378.1\|WP_080945867.1\|41361_42264_+\|pseudouridylate-synthase	gnl\|CDD\|211332	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family. This group is comprised of bacterial proteins assigned to the RluA family of pseudouridine synthases. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. The RluA family is comprised of proteins related to Escherichia coli RluA.	1.55812e-112
NZ_CP011378.1\|WP_046695837.1\|43157_44369_+\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
NZ_CP011378.1\|WP_046695836.1\|42380_42881_+\|putative-4-hydroxy-4-methyl-2-oxoglutarate-aldolase	gnl\|CDD\|236487	PRK09372, PRK09372, ribonuclease E inhibitor RraA.	2.64846e-87
NZ_CP011378.1\|WP_046695842.1\|54000_55503_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP011378.1\|WP_046695843.1\|55775_56984_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|275200	TIGR04407, LptF_YjgP, LPS export ABC transporter permease LptF. Members of this family are LptF, one of homologous, two tandem-encoded permease genes of an export ATP transporter for lipopolysaccharide (LPS) assembly in most Gram-negative bacteria. The other permease subunit is LptG (TIGR04408). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	1.65192e-80
NZ_CP011378.1\|WP_046695846.1\|59135_61523_+\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP011378.1\|WP_080947458.1\|39073_39577_+\|DUF4442-domain-containing-protein	gnl\|CDD\|370533	pfam09500, YiiD_C, Putative thioesterase (yiiD_Cterm). This entry consists of a broadly distributed uncharacterized domain often found as a standalone protein. The member from Shewanella oneidensis is described from crystallography work as a putative thioesterase because it belongs to the HotDog clan of enzymes. About half of the members of this family are fused to an Acetyltransf_1 domain pfam00583.	7.05668e-36
NZ_CP011378.1\|WP_046699067.1\|52657_53854_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_CP011378.1\|WP_046699066.1\|44703_48489_+\|type-V-CRISPR-associated-protein-Cas12a/Cpf1	gnl\|CDD\|275131	TIGR04330, conserved_hypothetical_protein, CRISPR-associated protein Cpf1, subtype PREFRAN. This family is the long protein of a novel CRISPR subtype, PREFRAN, which is most common in Prevotella and Francisella, although widely distributed. The PREFRAN type has Cas1, Cas2, and Cas4, but lacks the helicase Cas3 and endonuclease Cas3-HD.	0
NZ_CP011378.1\|WP_046695840.1\|51652_52564_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.17737e-62
NZ_CP011378.1\|WP_046695847.1\|61695_62970_-\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
NZ_CP011378.1\|WP_046695835.1\|40899_41214_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	3.91964e-13

>NZ_CP011378.1|WP_046695839.1|50128_50398_+|CRISPR-associated-endonuclease-Cas2
MIIVSYDISDNKVRGRFAKFLMQYGDRLQYSVYEIQNSERILNIITEKIKAEFEPLFAGADSVIIFRFTEREVLRFGHAKHRNEDLLIL
>NZ_CP011378.1|WP_080945869.1|49103_50132_+|type-V-CRISPR-associated-endonuclease-Cas1
MLSISDIKEKQMILLNNLEGGYHLCISQGNIIIKNKDSDETLTKITRHKAMALMIIGYCTLTNVLIEFCQKYGIALILLNSRLRPILFVSSFGEANYLLRQKQYAIGDNQALNFAKHFIEQKANNSITLLKGIRKKDDELRQMIETLADYQRQIDQTKRLDELMGIEGNIAKSYFKYHFGQLKHTSWQGRKPRLKIDSVNVVLDMGYTLLFNYIEINLRLFGFDVYKGMLHQLWYKRKSLVCDLVEPFRCIVDKQVLTSFNLGQFKTEHFNQIKMQYQLKTEHQRIYNAILMQAIIAHKVPIFVYVRDFYRAYMKYADKDMAFDELVLMLPSFDIQANGEDV
>NZ_CP011378.1|WP_080945868.1|48535_49090_+|type-V-CRISPR-associated-protein-Cas4
MEYHTLNISQLNDFIFCPYSIYLNNVYQALDDDTYHDTPQVKGKIAHEGVDNGTYSTKKTVITAMAVHSDKYGLTGKIDQYFADSKKLIERKRTIKTIYDGYKLQLYAQYFCLVEMGFEVDYLGFYSMTDNKSHALALPDDEIIDWFENYLYKIRHYNPMTDDIYINTNKCTHCIYQPLCDKTD
>NZ_CP011378.1|WP_046699066.1|44703_48489_+|type-V-CRISPR-associated-protein-Cas12a/Cpf1
MLFQDFTHLYPLSKTVRFELKPIGKTLEHIHAKNFLNQDETMADMYQKVKAILDDYHRDFIADMMGEVKLTKLAEFYDVYLKFRKNPKDDGLQKQLKDLQAVLRKEIVKPIGNGGKYKAGYDRLFGAKLFKDGKELGDLAKFVIAQEGESSPKLAHLAHFEKFSTYFTGFHDNRKNMYSDEDKHTAIAYRLIHENLPRFIDNLQILATIKQKHSALYDQIINELTASGLDVSLASHLDGYHKLLTQEGITAYNTLLGGISGEAGSRKIQGINELINSHHNQHCHKSERIAKLRPLHKQILSDGMGVSFLPSKFADDSEVCQAVNEFYRHYADVFAKVQSLFDGFDDYQKDGIYVEYKNLNELSKQAFGDFALLGRVLDGYYVDVVNPEFNERFAKAKTDNAKAKLTKEKDKFIKGVHSLASLEQAIEHYTARHDDESVQAGKLGQYFKHGLAGVDNPIQKIHNNHSTIKGFLERERPAGERALPKIKSDKSPEIRQLKELLDNALNVAHFAKLLTTKTTLHNQDGNFYGEFGALYDELAKIATLYNKVRDYLSQKPFSTEKYKLNFGNPTLLNGWDLNKEKDNFGVILQKDGCYYLALLDKAHKKVFDNAPNTGKSVYQKMIYKLLPGPNKMLPKVFFAKSNLDYYNPSAELLDKYAQGTHKKGDNFNLKDCHALIDFFKAGINKHPEWQHFGFKFSPTSSYQDLSDFYREVEPQGYQVKFVDINADYINELVEQGQLYLFQIYNKDFSPKAHGKPNLHTLYFKALFSEDNLVNPIYKLNGEAEIFYRKASLDMNETTIHRAGEVLENKNPDNPKKRQFVYDIIKDKRYTQDKFMLHVPITMNFGVQGMTIKEFNKKVNQSIQQYDEVNVIGIDRGERHLLYLTVINSKGEILEQRSLNDITTASANGTQMTTPYHKILDKREIERLNARVGWGEIETIKELKSGYLSHVVHQISQLMLKYNAIVVLEDLNFGFKRGCFKVEKQIYQNFENALIKKLNHLVLKDKADDEIGSYKNALQLTNNFTDLKSIGKQTGFLFYVPAWNTSKIDPETGFVDLLKPRYENIAQSQAFFGKFDKICYNADRGYFEFHIDYAKFNDKAKNSRQIWKICSHGDKRYVYDKTANQNKGATIGVNVNDELKSLFTRYHINDKQPNLVMDICQNNDKEFHKSLMYLLKTLLALRYSNASSDEDFILSPVANDEGVFFNSALADDTQPQNADANGAYHIALKGLWLLNELKNSDDLNKVKLAIDNQTWLNFAQNR
>NZ_CP011378.1|WP_046695837.1|43157_44369_+|serine/threonine-transporter-SstT
MRSLVNAYLKAGLVPMIIAALILGAIVGALLPSVGISVGILGAIFVGALKAVAPILVFVLVIAAVTSYRGGGDLRIKPVFILYLFGTFTAALTAVVASFTFPTELVLVAAENIEQTPPQDLKEVLTTLLMNLVANPVKSLAEANYMGILTWAVLIGLALRHVSETTRQVATDLSAAITNVVKWVIAFAPIGIFGLVAATVAETGLDALLGYGHLLMVLVGCMLFIALVVNPIIVLAVTRENPYPLVLACLRESGVTAFFTRSSAANIPVNMNLARKLGLNEETYSVTIPLGATINMAGAAITINVLTLAAAHTLGLDVSFGSALLLAIIGSLAACGASGVAGGSLLLIPMACSLFSIPNDIAMQVVAIGFIIGVVQDSAETALNSSTDVLFTAAVDPKYAYKG
>NZ_CP011378.1|WP_046695836.1|42380_42881_+|putative-4-hydroxy-4-methyl-2-oxoglutarate-aldolase
MSEFVTCDLLDDNADKDIQVVSPSMDGKFFRSFGGKKAFGGQAVTVKCFEDNSRVKELLATDGAGKVLVVDGGASMRCALLGDMIAESAVKYDWAGVIVYGCVRDVDALTELDLGVHALGCIPQKSTRKGIGETGVTLNFGGVSIKDGAYVYADNNGILVSDAALI
>NZ_CP011378.1|WP_080945867.1|41361_42264_+|pseudouridylate-synthase
MSDFVPPMIAGVSPSTIYLEKLVSPPVDLFTFLCQKFPHVGIPEWRRRFDDGLVFWEDGETTTIDAPYVHGRSVYYYRFLEDEVVVPFAHEVLYENDRFMVVDKPHFLAVTPGGEYVRQTLLTRLKQQTNNPDLSPIHRLDRETAGLILISKDVKTRGIYQSLFSDNAIHKIYHAIAPCNADMVFPMDVHLHLTRGEPFYTMRVDVNTPPNSHTLIHQLETQGDWAKYELHPTTGKLHQLRVHLNHLGMPIKNDPYYPQVKHKARGEFDAPLQLLAKSLSFIDPVTGEQIDFHSRRKLDF
>NZ_CP011378.1|WP_046695835.1|40899_41214_-|helix-turn-helix-transcriptional-regulator
MKSTEIFKVLGNDSRYQILLWLKDPATHFGTDALRCAETGFDGGICVGMIADKSGLAQSVISSYLASLQNAGLIESKRLGKWTYYRYRAQGVRDFIHQITHELN
>NZ_CP011378.1|WP_046699065.1|39796_40786_-|LLM-class-flavin-dependent-oxidoreductase
MTDVSILSLAPFRDGETFTDAVDDLVDLAQRAEKLGYSRYWIAEHHNTPYLASSATSLLIQRVLDKTNTIRVGSGGVMLPNHSPFIVAEQYGTLASLYPNRIDLGLGRAPGTDPQTARAIRRHQDDFAMNFPSDIKELQFYFGDDDQGKKVRAYPAKGLHVPLYILGSSTESAYLAAELGLPYAFASHFAPRFLTQAVDIYRNYFKPSAVLDAPQVIAGINAIIADSDDEAELLSTTSLQFFLNVVTGDRSGMKPPVADIERHVPPHILNMAKSMMACSIIGSPATAKEQIEELQSRIRADELMAVSYIHDKAKQKYSYELFADVVRSL
>NZ_CP011378.1|WP_080947458.1|39073_39577_+|DUF4442-domain-containing-protein
MLTTFPMGYATISTTINIRLIMKPLSYFLDRIPAASSLDIRVLEHDASCVRLLLPYQGNTNHHQTMFGGSLSLATTLAGWAILYENVPKVDGNIVIKSSQMRYLAPAPSDVEVVAELDDMDCQSVKEAFERFGRARVNVVCRLYCDQKDVGHFSGIYVAIKPNDTHQ
>NZ_CP011378.1|WP_046695840.1|51652_52564_+|LysR-family-transcriptional-regulator
MSTTLRQLRAFVLVAEQNSFTKAAETLCLTQSALSGLIKELEQNLDVKLFDRTTRKLHLSDAGMRLLPQARRVLNEMSVLNEKVSNLKSLHQGHIRLAVSQQLSASTMPKFIAKFCELHPHIQVTLTDCSVDDVVEHIENLEADLGVAPERVHSDDLKTDTLFRSPFYLVLPSTHPFAKKDVVRWADLLNERLITLNGPFIKSLQNELPANISNRIFHPDFEINFLSTALGMVRMGLGVTVCLLYAAEWVEQNGLVMRPIAEPVVERNFLLYTHKNRSLSPAAAAFKEFLIENAHEFLVSNPK
>NZ_CP011378.1|WP_046699067.1|52657_53854_+|aspartate/tyrosine/aromatic-aminotransferase
MFNHVEHYAGDPILGLMDKFANDPRTDIKVNLGVGVYYTEDGKLPVLECVKTAEAQIANPPRPRGYLPMDGLAGYKKACQDLLFGKDSQIVKDGRVATIATLGGSGALKVGADFIHEWFLNAKCYVSNPTWANHIGIFEGAGIEVAKYPYYDAQTIGVKFDEMCEFFKGLNENDVVLLHPCCHNPTGVDLTNDQWDVVLDIVKDKKLIAFMDIAYQGFGEDMEGDVYAIRRAVDMGLPIFVSNSFSKNLSLYGERVGGLSVVAPSKEEADRVQGQLKFTVRRIYSSPPSHGNNVVDIVMNDEALFEQWVGEVYEMRDRIREMRQKLQDTLTAKLPERDFSYFTKQRGMFSFTGLTAEQVVRLRDEFAVYMVENGRMCIAGLNNKNVEYVANAMAEVLK
>NZ_CP011378.1|WP_046695842.1|54000_55503_-|leucyl-aminopeptidase
MSIQLSVHSELTLKKATKSNPLPQLVFFADNEGKLLGNIQSEHTARAENLIKKSGFKGELCDVVSDYALSDDGVGITIIGAGKLDKLAKNIQKLGAATYKTIKNHKSAAIVWGDVICQKHFSQFALSLLAASYRFDRYFAKKADADKLAVLSFINNKDSQDDYQAALDLTKATFAGQSFARDLANEAPNNLNPVALAKEAKKLAKEYGDKVKVTILGEKEMTKLGMGCFMSVSQGSDAEGQLVVIEYYGKNKKGSKKAKLDNPIALVGKGITFDTGGISLKPGAGMDEMKFDMGGAAAMLGTTKAVCEAGLEIDLVTVLACAENMPSGKATRPGDIVTAMDGTSVEILNTDAEGRLVLCDALCYVQDNYKPRTIVDAATLTGACVIALGSVRSAVYSNDEDTLFALESAGEHTGDLLWQMPLDDEYASQLKSNFADLQNIGGREGGSITAACFLQHFIKEGQAWAHLDIAGTASLSGASKGATGRPVPMLVQFLKSQENQ
>NZ_CP011378.1|WP_046695843.1|55775_56984_+|LPS-export-ABC-transporter-permease-LptF
MIREVAMTTALVLGFLVVMLLGGRLIRYFGMAAEGGLDVGVLFTLIGYNLPYFLELIFPLSFFIGLMLVFGRLYADHEMVVLNASGISRGRVSRLIIPLVLVAFLAQGFITLVAKPWGVAKAANIWQEQSVLKIFDIITPRKFISSGEYHLYVGEIGENREYLQDVIVIQMAKNPDLRNAASMSDIAHQDDQADNAQKAQEIATRIPQELISEKDTIIFAKSATQVDSDDGVIRLDLHQGRRYEVDATSKKYSQIGFERYRISLAASSNEDLKPLKIEGWRTQDLFANMNTPNQTPSSQEIHAELGYRFSLPWLILIAAILAAPLAQVKPRQGRWLKLIPALFIFVANVLILISLKESIAKGKVGDWAYPVVLAVLFAVAIYINYHERMMAKLRLNRQGGAA
>NZ_CP011378.1|WP_046695844.1|56980_58072_+|LPS-export-ABC-transporter-permease-LptG
MKSHILAKYVIRAAFLAMLGAVLGLWLLQLIFAYLNELEGLSDTYMVMDALKFILYRSPYFLVQFIPTGALLGAVVGLGLLAGNSELVSMQASGVSKYRIISWAMIPASVFVVLSLAVNQYVLPITNQKAEAINTRTPETKLVSVNGYWSVNEHDGGQDIVHISYADSDGVLGETKRYTLDQSSNLTGAMRASSGVYDAKSSDDRYSWQLSDIDVVNINASGVSRTHENAKILTLPIAPTDVHLLTREPEDMSLTDLYAHGQLMNHQGSSSARHELKFWQKLLSPFAVLSLVLVASSFVFGSLRSQGLGLRIVLALLIGLLFSYLTDLTGFIALAANWSPFVMALLPIIISALAGVYLLQKRQ
>NZ_CP011378.1|WP_046699068.1|58125_58860_-|two-component-system-response-regulator-OmpR
MTETNENIAHRILVVDDDVRLRTLLQRFLEDDGFVVRVAHDGKQMDKLIAREIFSLIVLDLMLPDEDGISVCKRLRTENSDIPIIMLTAKGSDADRIAGLEAGADDYLPKPFNPKELLARIKAVLRRQNRELPGAPSQQMEVVEFGPWTLDLSTRTLKRDGNVVTLTTGEFSVLKALVQHPREPLTRDKLMNLARGREWGAMERSIDVQVSRLRRLIEDNPSQARYIQTVWGVGYVFVPDGAES
>NZ_CP011378.1|WP_046695846.1|59135_61523_+|RNA-binding-transcriptional-accessory-protein
MTDIVQTPIDHAAIYDKLAKEHGVKPSQVAAFAELFDEGASVPFIARYRKEQTGGLDDALLRALEKGLVLQRDLAARRIKIIELLTAQNALTDELVTRIEAANTKLELEEIYQPYRPRRRSVAARARLAGLEPIAQDILVGAAPSEALAGFSCPETLTDETGETFEADFKDFDKQLAGVQAIILDTWAQSLDLLDEVRLGFNKTASIRSELVGEEKREAGEKFKDYFEHSEPFAKLSNHRLLAMLRGRQQNVLVLHVDGEDEPFVQKIKSHFGVDQSAVNGEFLADTADKLWHAKWRSQIEHRLLTERRVAAETDAIGVFAENLKHLLMTAPAGRKVILGVDPGIRHGVKMAVIDATGDVLATDTAYPFEPYNKVDEARKMIAGLIRSHGVELVAIGNGTASRESESLVKSIIDDEKLSVKALVISEAGASVYSASEIASNELPDLDVSVRGAVSIARRLQDPLSELVKVEPKAIGVGQYQHDVNQTELESSLDKVTEDCVNAVGVDVNTASPAILAHIAGLNKNVAQQIVDYRRTNGAFKNREELKAVPRLGVKTFEQAAGFLRIKDGTEPLDATGVHPESYGLVYEILRKADKTLTDVLGNEAVAKSLNDSADNFSQLATVVAELAKPAHDPRGEFKTAKFRDDVNSIKDLTVGMVLEGVVTNVTAFGCFVDVGVHQDGLVHISELSDGFVDNPAAVVKPQDIVSVRVISVDEARGRIGFSMKSEAAKADKKADKPKEKEDRKPRTSDKKADKTKDQRSERRRSDKSDKPKAQDNKVGSLGALLKQAGLQLIR
>NZ_CP011378.1|WP_046695847.1|61695_62970_-|citrate-(Si)-synthase
MSNVKLVIDGTEYEMPVLESTLGRPVLDVSAVAKAGFWTYDPGFMATAPVESALTYIDGDKGELLHRGYAIDDLADNADYLEVCYALLYGDLPTTEQKEKFYARINDHMAVHDQLRKFFEGFRRDAHPMAIMIGVVGALSAFYHNHLDISDAAHRDDTAVDLIAKVPTLAAMSYKYSIGEPFLYPRKDFSYAENFLYMMFATPGDVDYKPNPVLVKAMDKIFTLHADHEQNASTSTVRLAGSTGANPYACIASGIAALWGPSHGGANEAVLTMLDEIGSIENVAPFMEKVKTKEAKLMGFGHRVYKNFDPRAKVMKETCDEVLGALGVNDPKLQLAMELEKIALSDQYFIDRKLYPNVDFYSGIILKAIGIPTSMFTVIFALARTAGWIAHWTEMHSEAFKIGRPRQRYIGEKHREFVKIEDRK
>NZ_CP011378.1|WP_080702176.1|63896_64286_+|succinate-dehydrogenase,-cytochrome-b556-subunit
MPAVKSNRPINLPLSQVIAVNSKSPIAMASILHRVSGIVLFLLVPVMLCILQTSLSSPEGFASVFDNVLLRFVAWIFVAATAYHFVMGIKHLLADLGMNEEFKSGKTAAVISFVIAAILIVASFVWVMF
>NZ_CP011378.1|WP_046695848.1|64285_64642_+|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein
MARNNSGVKSATGLTGSGSRDWILQRISAVVLAVYAVVVIGFFLFNQVDYNAWHGFMMSLPMKLFSLVAILSLVFHAWVGMWTVFTDYVKSSGLRIVLQAAVIIAVLVYLFWGVMIFW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP011378_1	1.2\|50680\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50680-50706	27	NZ_CP011378.1	984872-984898	0	1.0
NZ_CP011378_1	1.3\|50743\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50743-50769	27	NZ_CP011378.1	1690964-1690990	0	1.0
NZ_CP011378_1	1.4\|50806\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50806-50832	27	NZ_CP011378.1	972640-972666	0	1.0
NZ_CP011378_1	1.5\|50869\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50869-50895	27	NZ_CP011378.1	1172541-1172567	0	1.0
NZ_CP011378_1	1.6\|50932\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50932-50958	27	NZ_CP011378.1	1836453-1836479	0	1.0
NZ_CP011378_1	1.11\|51251\|28\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51251-51278	28	NZ_CP011378.1	2019026-2019053	0	1.0
NZ_CP011378_1	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	NZ_CP011378.1	2042507-2042535	1	0.966

1. spacer 1.2|50680|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to position: 984872-984898, mismatch: 0, identity: 1.0

tcaaaaatggtagcatttgttaagaat	CRISPR spacer
tcaaaaatggtagcatttgttaagaat	Protospacer
***************************

2. spacer 1.3|50743|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to position: 1690964-1690990, mismatch: 0, identity: 1.0

attgatgtaaacatcgatggtgtggtt	CRISPR spacer
attgatgtaaacatcgatggtgtggtt	Protospacer
***************************

3. spacer 1.4|50806|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to position: 972640-972666, mismatch: 0, identity: 1.0

cccatcaaggcttcaatatcatcgtgc	CRISPR spacer
cccatcaaggcttcaatatcatcgtgc	Protospacer
***************************

4. spacer 1.5|50869|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to position: 1172541-1172567, mismatch: 0, identity: 1.0

atgaaatagagcaacagcagaacggta	CRISPR spacer
atgaaatagagcaacagcagaacggta	Protospacer
***************************

5. spacer 1.6|50932|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to position: 1836453-1836479, mismatch: 0, identity: 1.0

tgcaggtggtgaatcagcgacacattc	CRISPR spacer
tgcaggtggtgaatcagcgacacattc	Protospacer
***************************

6. spacer 1.11|51251|28|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to position: 2019026-2019053, mismatch: 0, identity: 1.0

ctaaatgccgtgtcgttttggttcttat	CRISPR spacer
ctaaatgccgtgtcgttttggttcttat	Protospacer
****************************

7. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to position: 2042507-2042535, mismatch: 1, identity: 0.966

tgggaatattatagcagatttatttaatt	CRISPR spacer
tggggatattatagcagatttatttaatt	Protospacer
****.************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011378_1	1.13\|51377\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51377-51403	27	NZ_CP011375	Moraxella bovoculi strain 58069 plasmid unnamed, complete sequence	14285-14311	0	1.0
NZ_CP011378_1	1.4\|50806\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50806-50832	27	HQ634196	Vibrio phage VBP32 genomic sequence	44072-44098	4	0.852
NZ_CP011378_1	1.4\|50806\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50806-50832	27	HQ634194	Vibrio phage VBP47 genomic sequence	39328-39354	4	0.852
NZ_CP011378_1	1.2\|50680\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50680-50706	27	MN657113	Psychrobacter sp. strain ANT_P52 plasmid pA52P5, complete sequence	12610-12636	5	0.815
NZ_CP011378_1	1.4\|50806\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50806-50832	27	KR093633	Moraxella phage Mcat9, complete genome	15897-15923	5	0.815
NZ_CP011378_1	1.6\|50932\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50932-50958	27	MN694744	Marine virus AFVG_250M730, complete genome	1823-1849	5	0.815
NZ_CP011378_1	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	NZ_CP031072	Bacillus mycoides strain BPN401 plasmid pl395, complete sequence	318619-318647	5	0.828
NZ_CP011378_1	1.10\|51187\|28\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51187-51214	28	MN694658	Marine virus AFVG_250M284, complete genome	3542-3569	5	0.821
NZ_CP011378_1	1.12\|51315\|26\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51315-51340	26	KP280062	Vibrio phage phi 1, complete genome	57299-57324	5	0.808
NZ_CP011378_1	1.1\|50616\|28\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50616-50643	28	NZ_CP041396	Bacteroides ovatus strain 3725 D1 iv plasmid unnamed1, complete sequence	89558-89585	6	0.786
NZ_CP011378_1	1.3\|50743\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50743-50769	27	NC_007765	Rhizobium etli CFN 42 plasmid p42e, complete sequence	16147-16173	6	0.778
NZ_CP011378_1	1.3\|50743\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50743-50769	27	NZ_CP020909	Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence	16143-16169	6	0.778
NZ_CP011378_1	1.3\|50743\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50743-50769	27	NC_021908	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence	16144-16170	6	0.778
NZ_CP011378_1	1.4\|50806\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50806-50832	27	MF417903	Uncultured Caudovirales phage clone 10F_3, partial genome	23236-23262	6	0.778
NZ_CP011378_1	1.4\|50806\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	50806-50832	27	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	109302-109328	6	0.778
NZ_CP011378_1	1.13\|51377\|27\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51377-51403	27	NZ_AP014706	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence	301975-302001	6	0.778
NZ_CP011378_1	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	149149-149177	7	0.759
NZ_CP011378_1	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	323267-323295	7	0.759
NZ_CP011378_1	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	84248-84276	7	0.759
NZ_CP011378_1	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	NC_049857	Lactococcus phage P1048, complete genome	60198-60226	7	0.759
NZ_CP011378_1	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	MK448940	Streptococcus phage Javan444, complete genome	885-913	7	0.759

1. spacer 1.13|51377|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011375 (Moraxella bovoculi strain 58069 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ggaacctgttcgccgcttggatgttac	CRISPR spacer
ggaacctgttcgccgcttggatgttac	Protospacer
***************************

2. spacer 1.4|50806|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to HQ634196 (Vibrio phage VBP32 genomic sequence) position: , mismatch: 4, identity: 0.852

cccatcaaggcttcaatatcatcgtgc	CRISPR spacer
tccattaaggcttcaatatcatcttgg	Protospacer
.****.***************** **

3. spacer 1.4|50806|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to HQ634194 (Vibrio phage VBP47 genomic sequence) position: , mismatch: 4, identity: 0.852

cccatcaaggcttcaatatcatcgtgc	CRISPR spacer
tccattaaggcttcaatatcatcttgg	Protospacer
.****.***************** **

4. spacer 1.2|50680|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to MN657113 (Psychrobacter sp. strain ANT_P52 plasmid pA52P5, complete sequence) position: , mismatch: 5, identity: 0.815

tcaaaaatggtagcatttgttaagaat	CRISPR spacer
tccaaaatgttagcatttgttaacatg	Protospacer
** ****** ************* *

5. spacer 1.4|50806|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to KR093633 (Moraxella phage Mcat9, complete genome) position: , mismatch: 5, identity: 0.815

cccatcaaggcttcaatatcatcgtgc	CRISPR spacer
cctgacaaggcttcaatatcatcttgg	Protospacer
**.. ****************** **

6. spacer 1.6|50932|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to MN694744 (Marine virus AFVG_250M730, complete genome) position: , mismatch: 5, identity: 0.815

tgcaggtggtgaatcagcgacacattc	CRISPR spacer
tgcccgtggtgaatcagcgacacttat	Protospacer
***  ****************** * .

7. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031072 (Bacillus mycoides strain BPN401 plasmid pl395, complete sequence) position: , mismatch: 5, identity: 0.828

tgggaatattatagcagatttatttaatt	CRISPR spacer
tgctaatataatagaagatttatttaaat	Protospacer
**  ***** **** ************ *

8. spacer 1.10|51187|28|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to MN694658 (Marine virus AFVG_250M284, complete genome) position: , mismatch: 5, identity: 0.821

aagcggttcacaaaaaccactcattaag	CRISPR spacer
cagttggacacaaaaaccactcattaag	Protospacer
 **. *  ********************

9. spacer 1.12|51315|26|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to KP280062 (Vibrio phage phi 1, complete genome) position: , mismatch: 5, identity: 0.808

ctgtggctttcatgtcacacctctca	CRISPR spacer
ctgtagctttcatatcacacctcatc	Protospacer
****.********.********* .

10. spacer 1.1|50616|28|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041396 (Bacteroides ovatus strain 3725 D1 iv plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tttagaaatcacggatcattatatatgt	CRISPR spacer
tgaagaaatctctgatcattatatattc	Protospacer
*  ******* * ************* .

11. spacer 1.3|50743|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 6, identity: 0.778

attgatgtaaacatcgatggtgtggtt	CRISPR spacer
cttgatgtagacatcgatggtgacggg	Protospacer
 ********.************  *

12. spacer 1.3|50743|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 6, identity: 0.778

attgatgtaaacatcgatggtgtggtt	CRISPR spacer
cttgatgtagacatcgatggtgacggg	Protospacer
 ********.************  *

13. spacer 1.3|50743|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NC_021908 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence) position: , mismatch: 6, identity: 0.778

attgatgtaaacatcgatggtgtggtt	CRISPR spacer
cttgatgtagacatcgatggtgacggg	Protospacer
 ********.************  *

14. spacer 1.4|50806|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to MF417903 (Uncultured Caudovirales phage clone 10F_3, partial genome) position: , mismatch: 6, identity: 0.778

cccatcaaggcttcaatatcatcgtgc	CRISPR spacer
gacttcaaggcttcaatatcatcgaat	Protospacer
  * ******************** ..

15. spacer 1.4|50806|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

cccatcaaggcttcaatatcatcgtgc	CRISPR spacer
gtcatcaaggcttcaatataattgtta	Protospacer
 .***************** **.**

16. spacer 1.13|51377|27|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 6, identity: 0.778

ggaacctgttcgccgcttggatgttac	CRISPR spacer
tcaacctgttcgccgcctggatggtgg	Protospacer
  **************.****** *.

17. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 7, identity: 0.759

tgggaatattatagcagatttatttaatt	CRISPR spacer
catatatattatagcagatttatttaaga	Protospacer
.. . **********************

18. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 7, identity: 0.759

tgggaatattatagcagatttatttaatt	CRISPR spacer
catatatattatagcagatttatttaaga	Protospacer
.. . **********************

19. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 7, identity: 0.759

tgggaatattatagcagatttatttaatt	CRISPR spacer
tatatatattatagcagatttttttaaga	Protospacer
*. . **************** *****

20. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NC_049857 (Lactococcus phage P1048, complete genome) position: , mismatch: 7, identity: 0.759

tgggaatattatagcagatttatttaatt	CRISPR spacer
atataatattatagcatatttatttaaaa	Protospacer
  . ************ **********

21. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to MK448940 (Streptococcus phage Javan444, complete genome) position: , mismatch: 7, identity: 0.759

tgggaatattatagcagatttatttaatt	CRISPR spacer
atcaattattatagcagatatatttgatt	Protospacer
   .* ************* *****.***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

260134 : 265922

uncultured_Caudovirales_phage(16.67%)

integrase

attL 250307:250322|attR 267136:267151

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
250307:250322	attL	NA	NA	NA	NA
WP_046695977.1\|260134_261253_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4J339	uncultured_Caudovirales_phage	1.4e-106	53.5
WP_046695978.1\|261287_261479_-	hypothetical protein	NA	NA	NA	NA
WP_046695979.1\|261489_261873_-	hypothetical protein	R9TLR7	Paenibacillus_phage	1.0e-32	59.7
WP_046702018.1\|261994_262267_-	hypothetical protein	NA	NA	NA	NA
WP_046702019.1\|262332_262608_-	hypothetical protein	NA	NA	NA	NA
WP_155400226.1\|262591_262918_-	hypothetical protein	B5AXA3	Iodobacteriophage	1.3e-36	73.3
WP_046695981.1\|263071_263557_-	nucleoside triphosphate pyrophosphohydrolase family protein	A0A2I7S8G6	Vibrio_phage	2.7e-25	46.7
WP_046695982.1\|263553_263952_-	hypothetical protein	NA	NA	NA	NA
WP_046702020.1\|264109_264646_-	single-stranded DNA-binding protein	A0A291LA01	Bordetella_phage	2.4e-27	48.3
WP_046702021.1\|265421_265922_-	siphovirus Gp157 family protein	A0A0R6PHR8	Moraxella_phage	4.7e-33	45.2
267136:267151	attR	NA	NA	NA	NA

DBSCAN-SWA_2

269282 : 307477

Moraxella_phage(69.7%)

head,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046702025.1\|269282_269993_-	helix-turn-helix transcriptional regulator	A0A2H4J597	uncultured_Caudovirales_phage	2.0e-37	33.3
WP_046699098.1\|270379_270859_+	hypothetical protein	NA	NA	NA	NA
WP_080949067.1\|270855_271755_+	helix-turn-helix domain-containing protein	A0A0R6PHP4	Moraxella_phage	3.1e-19	48.4
WP_046702027.1\|271756_272392_+	hypothetical protein	NA	NA	NA	NA
WP_080948300.1\|272388_272754_+	VRR-NUC domain-containing protein	A0A2D1GNH3	Pseudomonas_phage	9.4e-15	40.2
WP_046702028.1\|272781_273060_+	hypothetical protein	A0A0R6PD09	Moraxella_phage	7.1e-31	64.1
WP_046695994.1\|273069_273591_+	hypothetical protein	A0A0P0ZAZ7	Stx2-converting_phage	5.4e-32	64.1
WP_046702029.1\|273580_274048_+	hypothetical protein	A0A0R6PCZ2	Moraxella_phage	7.5e-33	42.9
WP_046702030.1\|274044_274614_+	hypothetical protein	NA	NA	NA	NA
WP_155400182.1\|274606_275062_+	hypothetical protein	NA	NA	NA	NA
WP_046699442.1\|275476_275764_+	hypothetical protein	S5MLS6	Pseudoalteromonas_phage	6.9e-29	67.8
WP_046702032.1\|275760_276528_+	hypothetical protein	NA	NA	NA	NA
WP_155400183.1\|276497_276905_+	hypothetical protein	NA	NA	NA	NA
WP_155400045.1\|277043_277532_+	hypothetical protein	A0A0R6PH16	Moraxella_phage	5.2e-69	85.8
WP_046702033.1\|277531_279010_+	hypothetical protein	A0A0R6PHB9	Moraxella_phage	2.0e-252	84.1
WP_046696920.1\|279095_280214_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	1.1e-151	70.6
WP_046696000.1\|280312_281743_+	DUF4055 domain-containing protein	A0A0R6PHK8	Moraxella_phage	1.2e-203	74.4
WP_046696001.1\|281693_282680_+\|head	head morphogenesis protein	A0A0R6PHM5	Moraxella_phage	4.5e-144	78.2
WP_046699146.1\|282728_283394_+	hypothetical protein	A0A0R6PH19	Moraxella_phage	1.4e-45	69.3
WP_046702034.1\|283397_284414_+	hypothetical protein	A0A0R6PHI9	Moraxella_phage	1.1e-169	87.6
WP_046702035.1\|284424_284628_+	hypothetical protein	A0A0R6PCI4	Moraxella_phage	1.6e-19	71.6
WP_046696005.1\|284682_285030_+	hypothetical protein	A0A0R6PGY9	Moraxella_phage	3.6e-24	53.8
WP_046696006.1\|285031_285406_+	hypothetical protein	A0A0R6PHG4	Moraxella_phage	8.4e-27	51.3
WP_046696007.1\|285386_285815_+	HK97 gp10 family phage protein	A0A0R6PHN4	Moraxella_phage	4.6e-29	48.6
WP_046699149.1\|285817_286207_+	hypothetical protein	A0A0R6PK03	Moraxella_phage	8.7e-35	55.0
WP_046699116.1\|286291_286804_+	hypothetical protein	A0A2H4PAV0	Aphanizomenon_phage	1.3e-06	37.9
WP_046702036.1\|286831_287746_+	hypothetical protein	A0A0R6PJY2	Moraxella_phage	1.8e-115	68.2
WP_155400184.1\|287780_287972_+	hypothetical protein	NA	NA	NA	NA
WP_046702037.1\|287983_288436_+	hypothetical protein	A0A0R6PKF1	Moraxella_phage	4.7e-16	35.9
WP_080945912.1\|289180_289966_+	hypothetical protein	NA	NA	NA	NA
WP_080945913.1\|290258_290777_+	hypothetical protein	A0A0R6PDR4	Moraxella_phage	3.0e-38	75.2
WP_046702038.1\|290773_290971_+	hypothetical protein	NA	NA	NA	NA
WP_046699150.1\|291136_291628_+	DUF4065 domain-containing protein	NA	NA	NA	NA
WP_046702039.1\|291614_291971_+	hypothetical protein	NA	NA	NA	NA
WP_080949074.1\|292082_293105_+	RelA/SpoT domain-containing protein	A0A1B0VBT5	Salmonella_phage	1.9e-33	30.9
WP_080949075.1\|293147_297197_+	tape measure protein	A0A220VZA0	Acinetobacter_phage	9.1e-58	31.7
WP_046702158.1\|297198_297531_+	hypothetical protein	A0A0R6PHH7	Moraxella_phage	1.0e-44	77.3
WP_046702042.1\|297607_297979_+	hypothetical protein	A0A0R6PJ90	Moraxella_phage	1.8e-37	61.5
WP_046702043.1\|298024_298693_+\|tail	phage minor tail protein L	A0A0R6PJ72	Moraxella_phage	8.1e-97	75.6
WP_046702044.1\|298689_299505_+	C40 family peptidase	A0A0R6PHD1	Moraxella_phage	2.0e-97	63.4
WP_046699153.1\|299467_299665_-	hypothetical protein	NA	NA	NA	NA
WP_046702045.1\|300067_300661_+\|tail	tail assembly protein	A0A0R6PIF0	Moraxella_phage	6.3e-69	66.2
WP_080949078.1\|300657_306369_+	DUF1983 domain-containing protein	A0A0R6PHD3	Moraxella_phage	4.4e-18	67.1
WP_046696025.1\|306436_306805_+	hypothetical protein	A0A2H4JFC0	uncultured_Caudovirales_phage	1.8e-18	45.5
WP_046696026.1\|306844_307477_+	N-acetylmuramidase family protein	M4SQ91	Psychrobacter_phage	1.9e-26	38.0

DBSCAN-SWA_3

675750 : 728353

uncultured_Caudovirales_phage(17.39%)

tail,tRNA,terminase,protease,plate,head,portal,capsid,integrase

attL 675579:675596|attR 710641:710658

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
675579:675596	attL	NA	NA	NA	NA
WP_080946067.1\|675750_676728_-\|portal	phage portal protein	A0A2H4J922	uncultured_Caudovirales_phage	7.4e-115	61.9
WP_155400189.1\|676938_677094_+	hypothetical protein	NA	NA	NA	NA
WP_080946066.1\|677434_678217_+	KilA-N domain-containing protein	I6R977	Salmonella_phage	1.1e-31	44.6
WP_046699345.1\|678233_680000_-\|terminase	terminase	Q9ZXM5	Pseudomonas_virus	9.3e-225	64.8
WP_046699344.1\|680157_680970_+\|capsid	GPO family capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	2.1e-54	47.5
WP_046699343.1\|680980_681997_+\|capsid	phage major capsid protein, P2 family	E5E3W8	Burkholderia_phage	2.1e-104	58.2
WP_046699342.1\|682006_682693_+	hypothetical protein	Q9ZXM2	Pseudomonas_virus	3.8e-41	45.6
WP_046699341.1\|682805_683255_+\|head	head completion protein	Q9ZXM1	Pseudomonas_virus	4.0e-15	35.8
WP_046699340.1\|683251_683455_+	LysM peptidoglycan-binding domain-containing protein	O80307	Escherichia_phage	8.9e-07	52.3
WP_046699339.1\|683456_684254_+	DUF3380 domain-containing protein	Q9ZXL6	Pseudomonas_virus	2.4e-55	47.1
WP_046699338.1\|684250_684781_+\|tail	phage tail protein	A0A2H4J906	uncultured_Caudovirales_phage	2.1e-39	54.8
WP_046699337.1\|684777_685236_+	phage virion morphogenesis protein	E5FFH6	Burkholderia_phage	2.4e-15	35.1
WP_046699336.1\|685292_685772_-	peptidase M15	A0A0R6PGV9	Moraxella_phage	1.4e-39	56.2
WP_080946065.1\|685781_686114_-	hypothetical protein	A0A0B5L5G5	Acinetobacter_phage	6.3e-18	63.8
WP_080946064.1\|686110_686407_-	hypothetical protein	A0A1B1P9F5	Acinetobacter_phage	1.3e-17	44.6
WP_046702052.1\|686403_686850_-	hypothetical protein	A0A0R6PFI9	Moraxella_phage	7.2e-41	54.4
WP_046699335.1\|686842_687454_-	DUF4376 domain-containing protein	A0A0R6PC75	Moraxella_phage	2.0e-49	55.2
WP_080946063.1\|687453_689001_-\|tail	phage tail protein	A0A2H4J194	uncultured_Caudovirales_phage	1.2e-26	36.2
WP_080946062.1\|688997_689543_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	2.4e-30	37.1
WP_046699334.1\|689539_690433_-\|plate	baseplate assembly protein	S4TNY7	Salmonella_phage	7.1e-72	49.7
WP_046699333.1\|690441_690777_-\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	4.9e-18	46.3
WP_046699332.1\|690773_691418_-\|plate	phage baseplate assembly protein V	A0A2H4JFJ8	uncultured_Caudovirales_phage	7.9e-33	54.6
WP_046699331.1\|691580_692747_+\|tail	phage tail sheath protein	Q9ZXK4	Pseudomonas_virus	1.4e-157	71.5
WP_046699330.1\|692982_693498_+\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	4.5e-55	62.9
WP_080946061.1\|693736_694027_+\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	1.3e-06	29.3
WP_080946060.1\|693957_694149_+\|tail	GpE family phage tail protein	E5E3U7	Burkholderia_phage	7.1e-06	53.7
WP_046699329.1\|694374_698052_+\|tail	phage tail tape measure protein	A0A0R6PDG4	Moraxella_phage	5.9e-48	33.6
WP_080946059.1\|698062_698569_+\|tail	phage tail protein	A0A2H4JG54	uncultured_Caudovirales_phage	1.2e-31	48.2
WP_080949081.1\|698571_699801_+	hypothetical protein	A0A2H4JAV0	uncultured_Caudovirales_phage	5.7e-80	45.1
WP_080946057.1\|699860_700097_+	hypothetical protein	NA	NA	NA	NA
WP_046699328.1\|700344_700602_-	hypothetical protein	NA	NA	NA	NA
WP_080946056.1\|700627_701353_-	Bro-N domain-containing protein	A0A0P0J0J7	Acinetobacter_phage	2.3e-44	50.0
WP_046699327.1\|701637_702153_-	hypothetical protein	NA	NA	NA	NA
WP_080949083.1\|702226_703123_-	hypothetical protein	A0A0P0HSN8	Acinetobacter_phage	1.2e-23	59.2
WP_046699326.1\|703119_703473_-	hypothetical protein	NA	NA	NA	NA
WP_046699325.1\|703525_703747_-	hypothetical protein	NA	NA	NA	NA
WP_046699324.1\|703743_703992_-	hypothetical protein	NA	NA	NA	NA
WP_080946054.1\|703988_704162_-	hypothetical protein	NA	NA	NA	NA
WP_046699323.1\|704268_705012_+	LexA family transcriptional regulator	A0A0R6PJ00	Moraxella_phage	3.0e-52	48.2
WP_155400190.1\|705011_705449_+	hypothetical protein	Q4ZCB9	Staphylococcus_virus	1.5e-06	32.5
WP_046699322.1\|705439_706210_+	DUF1829 domain-containing protein	NA	NA	NA	NA
WP_046699321.1\|706268_707183_-	hypothetical protein	NA	NA	NA	NA
WP_155400191.1\|707441_707615_+	hypothetical protein	NA	NA	NA	NA
WP_046699320.1\|707614_708193_+	hypothetical protein	NA	NA	NA	NA
WP_080946052.1\|708249_708663_+	hypothetical protein	NA	NA	NA	NA
WP_155400192.1\|708652_708814_+	hypothetical protein	NA	NA	NA	NA
WP_155400193.1\|708810_708987_+	hypothetical protein	NA	NA	NA	NA
WP_080946051.1\|709042_709309_+	hypothetical protein	NA	NA	NA	NA
WP_046699318.1\|709319_710468_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J8L8	uncultured_Caudovirales_phage	1.4e-75	40.9
WP_046699317.1\|710641_711613_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
710641:710658	attR	NA	NA	NA	NA
WP_046696349.1\|711735_712314_+	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_080946050.1\|712378_713089_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_046696350.1\|713298_714660_+	phosphoglucosamine mutase	A0A127AWJ1	Bacillus_phage	5.8e-17	23.7
WP_046699316.1\|714935_715418_-	phage virion morphogenesis protein	A0A0A1IUZ3	Pseudomonas_phage	1.9e-10	29.7
WP_080946049.1\|715535_716759_-	hypothetical protein	Q6QIB9	Burkholderia_phage	7.0e-46	47.8
WP_080946048.1\|716755_718021_-	DUF935 family protein	Q6QIC0	Burkholderia_phage	4.2e-78	40.4
WP_080947484.1\|717998_718742_+	hypothetical protein	J9STP5	Pseudomonas_phage	5.4e-33	35.0
WP_046696352.1\|718751_719891_+	AAA family ATPase	A4JWN1	Burkholderia_virus	1.6e-89	55.1
WP_046696353.1\|719917_720145_+	hypothetical protein	NA	NA	NA	NA
WP_046696354.1\|720154_720400_+	hypothetical protein	NA	NA	NA	NA
WP_046696355.1\|720964_721240_+	HU family DNA-binding protein	A3E2K9	Sodalis_phage	4.4e-17	53.3
WP_046696356.1\|721306_721780_+	regulatory protein GemA	NA	NA	NA	NA
WP_080946046.1\|721800_722142_+	hypothetical protein	Q6QIE8	Burkholderia_phage	4.4e-14	42.5
WP_046697459.1\|722391_723477_+	hypothetical protein	A4JWJ9	Burkholderia_virus	2.5e-47	36.4
WP_155400194.1\|724328_724712_+	DUF2190 family protein	NA	NA	NA	NA
WP_046696358.1\|724722_725022_+	hypothetical protein	NA	NA	NA	NA
WP_046696359.1\|725025_725493_+	DUF1320 domain-containing protein	B7SDP4	Haemophilus_phage	7.1e-07	30.0
WP_046696360.1\|725492_725999_+	hypothetical protein	A4JWK3	Burkholderia_virus	6.9e-24	36.6
WP_046696361.1\|726011_727400_+\|tail	phage tail protein	A4JWK5	Burkholderia_virus	1.3e-96	43.5
WP_046696362.1\|727422_727935_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	7.9e-44	50.9
WP_046696363.1\|728050_728353_+\|tail	phage tail assembly protein	NA	NA	NA	NA

DBSCAN-SWA_4

768818 : 775573

Lake_Baikal_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046696390.1\|768818_769862_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.9e-77	44.8
WP_155399994.1\|769931_770579_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.8e-24	35.6
WP_046696392.1\|770623_770962_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_046696393.1\|770999_772868_-	Fe-S protein assembly chaperone HscA	F2Y2E1	Organic_Lake_phycodnavirus	5.4e-98	39.0
WP_046696394.1\|772981_773503_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
WP_046696395.1\|773512_773833_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	2.8e-23	50.0
WP_036366269.1\|773858_774242_-	Fe-S cluster assembly scaffold IscU	A0A2H4N7M4	Lake_Baikal_phage	1.3e-51	80.6
WP_046699309.1\|774349_775573_-	IscS subfamily cysteine desulfurase	A0A0H3TPH2	Faustovirus	5.7e-32	29.4

DBSCAN-SWA_5

826297 : 834796

Moraxella_phage(62.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046696435.1\|826297_827470_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A7P9	Microcystis_virus	3.8e-57	36.5
WP_080946037.1\|827770_828310_-	peptidase M15	A0A0R6PID9	Moraxella_phage	1.0e-57	59.9
WP_046696025.1\|828350_828719_-	hypothetical protein	A0A2H4JFC0	uncultured_Caudovirales_phage	1.8e-18	45.5
WP_046696437.1\|828930_830028_-	hypothetical protein	A0A0R6PHT2	Moraxella_phage	4.3e-47	34.7
WP_046696438.1\|830024_830387_-	hypothetical protein	A0A0R6PHL5	Moraxella_phage	9.9e-25	45.8
WP_046696305.1\|830383_832858_-	DUF1983 domain-containing protein	A0A0R6PD22	Moraxella_phage	2.2e-62	78.3
WP_046696439.1\|832959_833418_-	hypothetical protein	A0A0R6PHL4	Moraxella_phage	1.8e-15	63.9
WP_003659281.1\|833483_833639_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_036362158.1\|833681_833918_-	50S ribosomal protein L28	NA	NA	NA	NA
WP_046696440.1\|834190_834532_-	HopJ type III effector protein	NA	NA	NA	NA
WP_046696441.1\|834547_834796_-	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	7.8e-13	70.6

DBSCAN-SWA_6

1011754 : 1104313

109

Burkholderia_virus(15.62%)

tail,tRNA,terminase,transposase,plate,capsid,integrase

attL 1021084:1021101|attR 1098032:1098049

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046697495.1\|1011754_1012864_+\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
WP_046696569.1\|1012864_1013524_-	hypothetical protein	NA	NA	NA	NA
WP_046699290.1\|1013633_1014713_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	2.3e-08	48.3
WP_046699289.1\|1014770_1015754_+\|integrase	site-specific integrase	A0A0R6PHH4	Moraxella_phage	1.5e-67	44.7
WP_046699288.1\|1015754_1016852_-	ribonucleotide-diphosphate reductase subunit beta	M4M9S3	Vibrio_phage	5.5e-151	70.6
WP_046699287.1\|1016857_1017160_-	hypothetical protein	NA	NA	NA	NA
WP_046699286.1\|1017140_1017659_-	hypothetical protein	U5PZY8	Acinetobacter_phage	5.2e-35	44.4
WP_046699285.1\|1017658_1017874_-	hypothetical protein	NA	NA	NA	NA
WP_046699284.1\|1017883_1018582_-	hypothetical protein	A0A1L2C917	Pseudomonas_phage	4.0e-46	43.3
WP_046699283.1\|1018604_1019111_-	HNH endonuclease	A0A2P9J4Z6	Pectobacterium_phage	5.6e-34	47.0
WP_046699282.1\|1019091_1019814_-	AAA family ATPase	M4SNJ2	Pseudoalteromonas_phage	1.1e-78	61.1
1021084:1021101	attL	NA	NA	NA	NA
WP_046699281.1\|1021979_1022597_-	hypothetical protein	A0A240EWM4	Vibrio_phage	3.1e-50	51.4
WP_046699280.1\|1022850_1023084_-	hypothetical protein	A0A1J0GV14	Vibrio_phage	8.6e-14	54.8
WP_155400198.1\|1023313_1024165_-	hypothetical protein	A0A0A0YPX0	Escherichia_phage	3.2e-74	48.3
WP_046702059.1\|1024353_1024836_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	4.7e-06	27.0
WP_080949092.1\|1024949_1026197_-	hypothetical protein	Q6QIB9	Burkholderia_phage	9.3e-46	48.3
WP_046702060.1\|1026198_1027674_-	DUF935 family protein	Q6QIC0	Burkholderia_phage	5.0e-99	42.6
WP_046702061.1\|1027674_1028994_-\|terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	3.4e-155	65.6
WP_046702062.1\|1029024_1029570_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	5.5e-35	42.5
WP_046702063.1\|1029578_1029884_-	hypothetical protein	Q6QIC3	Burkholderia_phage	1.6e-23	53.1
WP_046702064.1\|1029880_1030201_-	hypothetical protein	Q6QIC4	Burkholderia_phage	1.1e-11	43.3
WP_046702065.1\|1030204_1030420_-	hypothetical protein	A0A2H4JDJ0	uncultured_Caudovirales_phage	1.7e-11	54.1
WP_046702066.1\|1030419_1030647_-	hypothetical protein	A0A0M4UKB4	Ralstonia_phage	9.6e-10	53.0
WP_046702067.1\|1030649_1031186_-	N-acetylmuramoyl-L-alanine amidase	E5EYD9	Acinetobacter_phage	5.6e-40	50.9
WP_046702068.1\|1031391_1031628_-	excalibur calcium-binding domain-containing protein	NA	NA	NA	NA
WP_046702069.1\|1031638_1032304_-	hypothetical protein	NA	NA	NA	NA
WP_046702070.1\|1032300_1032762_-	hypothetical protein	NA	NA	NA	NA
WP_046702071.1\|1032782_1033193_-	helix-turn-helix transcriptional regulator	A4JWN8	Burkholderia_virus	1.1e-19	44.2
WP_046702072.1\|1033327_1033519_+	DNA-binding protein	NA	NA	NA	NA
WP_046702073.1\|1033508_1033796_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_046702074.1\|1033880_1034783_+	hypothetical protein	A4JWN3	Burkholderia_virus	2.0e-45	38.9
WP_155400199.1\|1034813_1036598_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	1.1e-135	45.0
WP_046702075.1\|1036607_1037747_+	AAA family ATPase	A4JWN1	Burkholderia_virus	1.3e-91	46.5
WP_046702076.1\|1037790_1038027_+	hypothetical protein	NA	NA	NA	NA
WP_046702077.1\|1038036_1038279_+	hypothetical protein	NA	NA	NA	NA
WP_046702078.1\|1038282_1038915_+	DUF3164 family protein	A0A2P9JZH0	Alteromonadaceae_phage	3.2e-55	54.3
WP_046702079.1\|1038995_1039268_+	HU family DNA-binding protein	A3E2K9	Sodalis_phage	2.1e-19	53.9
WP_046702080.1\|1039334_1039802_+	regulatory protein GemA	NA	NA	NA	NA
WP_080946046.1\|1039832_1040174_+	hypothetical protein	Q6QIE8	Burkholderia_phage	4.4e-14	42.5
WP_046702168.1\|1040423_1041479_+	hypothetical protein	A4JWJ9	Burkholderia_virus	7.1e-47	35.4
WP_046702081.1\|1041505_1042435_+	hypothetical protein	A4JWK0	Burkholderia_virus	2.9e-44	37.8
WP_046702082.1\|1042451_1042781_+	DUF2190 family protein	NA	NA	NA	NA
WP_046702083.1\|1042792_1043119_+	hypothetical protein	NA	NA	NA	NA
WP_046702084.1\|1043122_1043590_+	DUF1320 domain-containing protein	A0A0M3LP98	Mannheimia_phage	7.1e-07	28.4
WP_046702085.1\|1043589_1044096_+	hypothetical protein	A4JWK3	Burkholderia_virus	6.9e-24	36.6
WP_046696361.1\|1044108_1045497_+\|tail	phage tail protein	A4JWK5	Burkholderia_virus	1.3e-96	43.5
WP_046702086.1\|1045519_1046032_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.5e-42	48.5
WP_046702087.1\|1046139_1046442_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_080949148.1\|1046401_1046623_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_046702088.1\|1046619_1046808_-	hypothetical protein	NA	NA	NA	NA
WP_080949094.1\|1046854_1049881_+\|tail	phage tail tape measure protein	A0A1W6JT50	Escherichia_phage	7.1e-108	44.1
WP_080949096.1\|1049880_1050768_+	hypothetical protein	NA	NA	NA	NA
WP_029103120.1\|1050782_1051001_+	hypothetical protein	NA	NA	NA	NA
WP_046702089.1\|1051017_1052076_+	hypothetical protein	Q6QIA2	Burkholderia_phage	5.6e-60	40.0
WP_046702090.1\|1052059_1052605_+\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_046702091.1\|1052695_1053046_+\|plate	phage baseplate protein	NA	NA	NA	NA
WP_046702092.1\|1053070_1054210_+\|plate	baseplate assembly protein	A4JWL6	Burkholderia_virus	1.6e-52	36.1
WP_046702093.1\|1054202_1054802_+\|tail	tail fiber protein	Q6QI98	Burkholderia_phage	4.5e-46	52.4
WP_046702094.1\|1054829_1057277_+	hypothetical protein	D9I6I2	Acinetobacter_virus	7.0e-13	58.7
WP_046702095.1\|1057276_1057888_+	DUF4376 domain-containing protein	A0A0R6PGN1	Moraxella_phage	1.2e-49	54.4
WP_046702096.1\|1057880_1058336_+	hypothetical protein	A0A0R6PGL8	Moraxella_phage	6.6e-42	59.3
WP_046702097.1\|1058361_1058889_+	ATP-binding protein	M1I7M3	Pelagibacter_phage	1.2e-13	38.0
WP_080949100.1\|1059046_1059205_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_080949150.1\|1059349_1060147_+	hypothetical protein	A0A0R6PH56	Moraxella_phage	2.8e-80	55.1
WP_046702099.1\|1060245_1060674_+	hypothetical protein	NA	NA	NA	NA
WP_155400200.1\|1060725_1060956_+	hypothetical protein	NA	NA	NA	NA
WP_046699277.1\|1060947_1061232_-	hypothetical protein	I2GUJ4	Acinetobacter_phage	3.0e-08	43.4
WP_046702100.1\|1061228_1062140_-	hypothetical protein	G0YVB3	Pseudomonas_phage	1.8e-83	54.6
WP_046699275.1\|1062132_1062522_-	hypothetical protein	NA	NA	NA	NA
WP_155400201.1\|1062578_1062968_-	hypothetical protein	NA	NA	NA	NA
WP_155400228.1\|1063015_1063285_-	hypothetical protein	NA	NA	NA	NA
WP_046699459.1\|1063349_1063676_-	hypothetical protein	B5AXA3	Iodobacteriophage	9.5e-35	69.5
WP_046699273.1\|1063796_1064084_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046699272.1\|1064285_1064597_-	hypothetical protein	NA	NA	NA	NA
WP_046699271.1\|1064596_1064917_-	hypothetical protein	NA	NA	NA	NA
WP_046699270.1\|1064897_1065122_-	hypothetical protein	NA	NA	NA	NA
WP_155400202.1\|1065269_1071995_+	hypothetical protein	A0A0R6PD22	Moraxella_phage	8.6e-21	87.7
WP_046699268.1\|1071991_1072342_+	hypothetical protein	A0A0R6PHL5	Moraxella_phage	4.8e-24	43.6
WP_155400203.1\|1072338_1073373_+	hypothetical protein	A0A0R6PHT2	Moraxella_phage	1.5e-41	34.8
WP_046699264.1\|1074066_1074729_+	hypothetical protein	D6QWP0	uncultured_phage	3.4e-47	57.4
WP_080946019.1\|1075188_1075818_-	hypothetical protein	A0A127AYS1	Bacillus_phage	4.4e-12	34.6
WP_046699263.1\|1075814_1076036_-	hypothetical protein	NA	NA	NA	NA
WP_080946171.1\|1077193_1077643_-	HNH endonuclease	A0A0B5HDZ3	Vibrio_phage	2.0e-30	50.3
WP_046699456.1\|1077835_1079458_-	hypothetical protein	S4TTM6	Salmonella_phage	1.1e-131	48.8
WP_046699261.1\|1079454_1079895_-	hypothetical protein	NA	NA	NA	NA
WP_046699260.1\|1080009_1081122_-	hypothetical protein	A0A2P0N9T7	Pectobacterium_phage	6.1e-57	35.1
WP_046699258.1\|1081492_1081702_-	hypothetical protein	NA	NA	NA	NA
WP_046699257.1\|1081766_1082762_-	hypothetical protein	M4SLY4	Vibrio_phage	2.8e-69	41.0
WP_046699256.1\|1082763_1083258_-	hypothetical protein	A0A0R6PGZ8	Moraxella_phage	6.3e-14	33.1
WP_046699255.1\|1083254_1083488_-	hypothetical protein	NA	NA	NA	NA
WP_046699254.1\|1083488_1083689_-	hypothetical protein	NA	NA	NA	NA
WP_080949152.1\|1083888_1085097_-	hypothetical protein	A0A2P9J4X1	Pectobacterium_phage	6.8e-70	37.3
WP_046699252.1\|1085396_1085618_-	hypothetical protein	NA	NA	NA	NA
WP_046699251.1\|1085617_1085881_-	hypothetical protein	NA	NA	NA	NA
WP_155400204.1\|1085880_1086741_-	hypothetical protein	NA	NA	NA	NA
WP_046699249.1\|1086997_1087261_-	hypothetical protein	NA	NA	NA	NA
WP_080949102.1\|1088041_1089781_+	DUF4433 domain-containing protein	NA	NA	NA	NA
WP_046701085.1\|1089780_1090476_+	hypothetical protein	NA	NA	NA	NA
WP_046702104.1\|1091028_1091361_-	hypothetical protein	NA	NA	NA	NA
WP_046702105.1\|1091508_1092192_+	hypothetical protein	A0A0A0YUA7	Escherichia_phage	3.6e-60	54.6
WP_046699244.1\|1092279_1093854_+	hypothetical protein	A0A2P0PAT7	Pectobacterium_phage	2.6e-194	62.0
WP_046699243.1\|1093863_1094508_+	hypothetical protein	NA	NA	NA	NA
WP_046701893.1\|1094504_1096805_+	hypothetical protein	A0A0A0YRN0	Escherichia_phage	2.7e-168	47.9
WP_046699241.1\|1096869_1097172_+	hypothetical protein	NA	NA	NA	NA
WP_046699240.1\|1097164_1098289_+	hypothetical protein	S4TT67	Salmonella_phage	1.6e-41	38.5
1098032:1098049	attR	NA	NA	NA	NA
WP_046699239.1\|1098307_1099465_+\|capsid	N4-gp56 family major capsid protein	A0A2P0PAU2	Pectobacterium_phage	6.5e-118	56.6
WP_046701896.1\|1099537_1100050_+	hypothetical protein	A0A2I7R0J6	Vibrio_phage	3.1e-24	40.0
WP_046702106.1\|1100067_1101741_+	hypothetical protein	A0A2I7RAT8	Vibrio_phage	2.6e-11	36.7
WP_046702107.1\|1101805_1104313_+	hypothetical protein	U5PW53	Acinetobacter_phage	4.2e-29	23.4

DBSCAN-SWA_7

1315192 : 1324378

Acinetobacter_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046696695.1\|1315192_1315684_+	glutathione peroxidase	A0A1S7DM81	Molluscum_contagiosum_virus	3.1e-13	35.2
WP_080945990.1\|1316115_1317630_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_046696696.1\|1317805_1318429_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.4e-79	69.5
WP_046696697.1\|1318461_1319544_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	5.7e-92	53.2
WP_046699212.1\|1319573_1320410_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	5.1e-56	49.6
WP_046696699.1\|1320478_1321108_-	MarC family protein	NA	NA	NA	NA
WP_046696700.1\|1321258_1321954_+	7-cyano-7-deazaguanine synthase QueC	M1PKZ7	Cellulophaga_phage	8.9e-30	35.8
WP_046696701.1\|1322063_1322405_+	quaternary ammonium transporter	NA	NA	NA	NA
WP_046696702.1\|1322422_1323028_+	TetR/AcrR family transcriptional regulator	A0A0R6PIB6	Moraxella_phage	9.1e-39	52.5
WP_046696703.1\|1323064_1324378_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.7e-191	85.1

DBSCAN-SWA_8

1995925 : 2129959

152

Moraxella_phage(67.05%)

tail,terminase,protease,transposase,head,portal,capsid,integrase

attL 2096387:2096403|attR 2136874:2136890

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046697128.1\|1995925_1997116_-	elongation factor Tu	A0A1M7XUR5	Cedratvirus	2.5e-16	29.1
WP_046699157.1\|1997633_1997912_+	anti-CRISPR N-acetyltransferase AcrVA5	NA	NA	NA	NA
WP_046699156.1\|1997916_1998621_+	anti-CRISPR protein AcrVA4	NA	NA	NA	NA
WP_046699155.1\|1998743_1998935_+	hypothetical protein	NA	NA	NA	NA
WP_080945915.1\|1998967_1999507_-	DUF882 domain-containing protein	A0A0R6PGV9	Moraxella_phage	1.7e-60	62.1
WP_046696025.1\|1999547_1999916_-	hypothetical protein	A0A2H4JFC0	uncultured_Caudovirales_phage	1.8e-18	45.5
WP_046696024.1\|2000127_2001183_-	hypothetical protein	A0A0R6PHT2	Moraxella_phage	2.1e-59	39.0
WP_046699127.1\|2001179_2001539_-	hypothetical protein	A0A0R6PHL5	Moraxella_phage	4.3e-20	47.5
WP_080949117.1\|2001535_2007556_-	DUF1983 domain-containing protein	A0A0R6PHL4	Moraxella_phage	1.2e-26	33.5
WP_046702045.1\|2007552_2008146_-\|tail	tail assembly protein	A0A0R6PIF0	Moraxella_phage	6.3e-69	66.2
WP_046699153.1\|2008548_2008746_+	hypothetical protein	NA	NA	NA	NA
WP_046702044.1\|2008708_2009524_-	C40 family peptidase	A0A0R6PHD1	Moraxella_phage	2.0e-97	63.4
WP_046702043.1\|2009520_2010189_-\|tail	phage minor tail protein L	A0A0R6PJ72	Moraxella_phage	8.1e-97	75.6
WP_046702042.1\|2010234_2010606_-	hypothetical protein	A0A0R6PJ90	Moraxella_phage	1.8e-37	61.5
WP_046702158.1\|2010682_2011015_-	hypothetical protein	A0A0R6PHH7	Moraxella_phage	1.0e-44	77.3
WP_046702123.1\|2011016_2015156_-	tape measure protein	A0A0R6PHD0	Moraxella_phage	1.2e-86	27.1
WP_080949156.1\|2015210_2016230_-	RelA/SpoT domain-containing protein	A0A1B0VBT5	Salmonella_phage	1.9e-33	31.5
WP_046701930.1\|2016330_2016528_-	hypothetical protein	NA	NA	NA	NA
WP_080948295.1\|2016524_2017043_-	hypothetical protein	A0A0R6PDR4	Moraxella_phage	3.0e-38	75.2
WP_046701931.1\|2017345_2017774_-	PH domain-containing protein	A0A2K9VAF2	Klebsiella_virus	1.0e-23	45.9
WP_080948296.1\|2017853_2018108_-	hypothetical protein	NA	NA	NA	NA
WP_046701932.1\|2018143_2018563_-	hypothetical protein	NA	NA	NA	NA
WP_046702125.1\|2018577_2019489_-	hypothetical protein	A0A0R6PJY2	Moraxella_phage	1.4e-62	42.6
WP_046696009.1\|2019515_2020028_-	hypothetical protein	A0A2H4PAV0	Aphanizomenon_phage	1.3e-06	37.9
WP_046702126.1\|2020112_2020511_-	hypothetical protein	A0A0R6PK03	Moraxella_phage	2.5e-29	49.2
WP_080949119.1\|2020750_2021311_-	hypothetical protein	A0A0P0ZCS0	Stx2-converting_phage	6.1e-21	53.9
WP_046699114.1\|2021487_2021709_+	hypothetical protein	A0A0P0IKW9	Acinetobacter_phage	1.9e-10	66.0
WP_080949121.1\|2021714_2022053_-	hypothetical protein	A0A0R6PHN4	Moraxella_phage	1.1e-25	54.7
WP_046699113.1\|2022052_2022409_-	hypothetical protein	A0A0R6PH70	Moraxella_phage	3.3e-33	59.0
WP_046699112.1\|2022408_2022777_-	hypothetical protein	A0A0R6PGY9	Moraxella_phage	1.2e-22	51.4
WP_080945901.1\|2022794_2023091_-	hypothetical protein	NA	NA	NA	NA
WP_046699111.1\|2023090_2024038_-	hypothetical protein	A0A0D4DBM4	Acinetobacter_phage	1.4e-107	59.6
WP_046699110.1\|2024039_2024768_-	hypothetical protein	A0A1B1P9C7	Acinetobacter_phage	3.8e-23	36.4
WP_080945900.1\|2024923_2026675_-\|head	head morphogenesis protein	A0A0R6PHM5	Moraxella_phage	2.0e-203	61.7
WP_155400044.1\|2026680_2026827_-	hypothetical protein	NA	NA	NA	NA
WP_080945899.1\|2026823_2028218_-	DUF4055 domain-containing protein	A0A1B1P9C6	Acinetobacter_phage	1.6e-78	42.1
WP_046699109.1\|2028226_2029705_-	hypothetical protein	A0A0R6PHB9	Moraxella_phage	1.7e-232	77.6
WP_046699108.1\|2029704_2030118_-	hypothetical protein	A0A0R6PH16	Moraxella_phage	5.2e-38	59.4
WP_046699107.1\|2030235_2030430_+	hypothetical protein	NA	NA	NA	NA
WP_046699106.1\|2030473_2030686_+	hypothetical protein	A0A0M3LSW2	Mannheimia_phage	4.2e-07	49.1
WP_080948299.1\|2030873_2031632_-	hypothetical protein	D0UIK6	Aggregatibacter_phage	5.9e-27	39.0
WP_046699105.1\|2031585_2031828_-	hypothetical protein	NA	NA	NA	NA
WP_080945898.1\|2031919_2032495_+	LexA family transcriptional regulator	NA	NA	NA	NA
WP_046699104.1\|2032620_2033352_-	hypothetical protein	B6SD57	Bacteriophage	3.9e-44	43.3
WP_046702127.1\|2033687_2034188_-	hypothetical protein	NA	NA	NA	NA
WP_046696920.1\|2034571_2035690_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	1.1e-151	70.6
WP_080949122.1\|2035690_2036356_-	hypothetical protein	NA	NA	NA	NA
WP_080947463.1\|2036748_2037216_-	hypothetical protein	A0A0R6PCZ2	Moraxella_phage	4.9e-32	43.6
WP_046695994.1\|2037205_2037727_-	hypothetical protein	A0A0P0ZAZ7	Stx2-converting_phage	5.4e-32	64.1
WP_046702028.1\|2037736_2038015_-	hypothetical protein	A0A0R6PD09	Moraxella_phage	7.1e-31	64.1
WP_080948300.1\|2038042_2038408_-	VRR-NUC domain-containing protein	A0A2D1GNH3	Pseudomonas_phage	9.4e-15	40.2
WP_155400214.1\|2038404_2039157_-	hypothetical protein	NA	NA	NA	NA
WP_080949067.1\|2039041_2039941_-	helix-turn-helix domain-containing protein	A0A0R6PHP4	Moraxella_phage	3.1e-19	48.4
WP_046699098.1\|2039937_2040417_-	hypothetical protein	NA	NA	NA	NA
WP_080949124.1\|2040461_2040686_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046702128.1\|2040809_2041535_+	LexA family transcriptional regulator	A0A0R6PCY1	Moraxella_phage	6.4e-47	56.1
WP_080945895.1\|2041536_2042067_+	hypothetical protein	A0A2H4JB10	uncultured_Caudovirales_phage	3.6e-07	58.7
WP_046702129.1\|2042892_2043078_+	hypothetical protein	NA	NA	NA	NA
WP_046702130.1\|2043135_2043480_+	hypothetical protein	NA	NA	NA	NA
WP_155400215.1\|2043452_2043692_+	hypothetical protein	NA	NA	NA	NA
WP_155400216.1\|2043688_2043844_+	hypothetical protein	NA	NA	NA	NA
WP_155400217.1\|2043830_2043977_+	hypothetical protein	NA	NA	NA	NA
WP_046702132.1\|2043973_2044480_+	siphovirus Gp157 family protein	NA	NA	NA	NA
WP_046702133.1\|2044479_2045109_+	hypothetical protein	A0A0R6PHJ4	Moraxella_phage	7.9e-94	78.8
WP_046702134.1\|2045105_2045834_+	hypothetical protein	A0A0R6PD08	Moraxella_phage	2.8e-34	38.2
WP_046696920.1\|2046006_2047125_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	1.1e-151	70.6
WP_155400218.1\|2047313_2047685_+	hypothetical protein	NA	NA	NA	NA
WP_046702136.1\|2047824_2048217_+	hypothetical protein	B5AXA3	Iodobacteriophage	4.5e-39	64.3
WP_080949127.1\|2048200_2048413_+	hypothetical protein	NA	NA	NA	NA
WP_080949129.1\|2048433_2048847_+	hypothetical protein	NA	NA	NA	NA
WP_046699089.1\|2048836_2049064_+	hypothetical protein	NA	NA	NA	NA
WP_046702138.1\|2049047_2049314_+	hypothetical protein	NA	NA	NA	NA
WP_080949131.1\|2049552_2050512_+	hypothetical protein	G0YVB3	Pseudomonas_phage	1.1e-83	55.0
WP_046702139.1\|2050525_2050807_+	hypothetical protein	A0A0R6PCX9	Moraxella_phage	5.9e-25	62.4
WP_046702140.1\|2050836_2051847_-\|integrase	site-specific integrase	A0A0R6PHH4	Moraxella_phage	4.1e-108	57.7
WP_046697145.1\|2052690_2053917_+	alanine racemase	NA	NA	NA	NA
WP_046699132.1\|2053979_2055485_-	anthranilate synthase	NA	NA	NA	NA
WP_046697147.1\|2056139_2059034_-	DNA polymerase I	A0A142F1Q9	Bacillus_phage	8.1e-69	31.9
WP_046697148.1\|2059145_2059445_-	hypothetical protein	NA	NA	NA	NA
WP_046697149.1\|2059551_2060367_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_046697595.1\|2060379_2061048_-	DedA family protein	NA	NA	NA	NA
WP_155400219.1\|2061265_2061580_-	hypothetical protein	NA	NA	NA	NA
WP_046696370.1\|2061652_2062063_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	3.3e-48	64.2
WP_046701954.1\|2063513_2065271_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_046697152.1\|2065870_2066293_-	hypothetical protein	NA	NA	NA	NA
WP_080945910.1\|2066311_2066548_-	EndoU domain-containing protein	NA	NA	NA	NA
WP_046697154.1\|2066808_2067045_-	hypothetical protein	NA	NA	NA	NA
WP_080945909.1\|2067041_2073761_-	S-layer family protein	NA	NA	NA	NA
WP_046697156.1\|2073793_2075197_-	hypothetical protein	NA	NA	NA	NA
WP_080945908.1\|2075409_2076075_-	hypothetical protein	NA	NA	NA	NA
WP_080946156.1\|2076378_2077011_-	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	1.6e-30	39.7
WP_046699129.1\|2077160_2078747_-	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	5.5e-11	33.1
WP_046702142.1\|2078891_2079524_-	N-acetylmuramidase family protein	M4SQ91	Psychrobacter_phage	1.9e-26	38.5
WP_046696025.1\|2079563_2079932_-	hypothetical protein	A0A2H4JFC0	uncultured_Caudovirales_phage	1.8e-18	45.5
WP_046696024.1\|2080143_2081199_-	hypothetical protein	A0A0R6PHT2	Moraxella_phage	2.1e-59	39.0
WP_046699127.1\|2081195_2081555_-	hypothetical protein	A0A0R6PHL5	Moraxella_phage	4.3e-20	47.5
WP_080949134.1\|2081551_2087593_-	DUF1983 domain-containing protein	A0A0R6PGJ9	Moraxella_phage	6.3e-31	41.8
WP_046699487.1\|2087633_2088209_-\|tail	tail assembly protein	A0A0R6PIW1	Moraxella_phage	8.3e-74	89.0
WP_046699374.1\|2088616_2088814_+	hypothetical protein	A0A0M3LQV3	Mannheimia_phage	2.8e-05	43.1
WP_046699375.1\|2088788_2089580_-	C40 family peptidase	A0A0R6PIM4	Moraxella_phage	1.3e-130	83.3
WP_046696310.1\|2089635_2090022_-	hypothetical protein	NA	NA	NA	NA
WP_046696311.1\|2090021_2090795_-	hypothetical protein	NA	NA	NA	NA
WP_046702143.1\|2090855_2091569_-\|tail	phage minor tail protein L	A0A0R6PGU8	Moraxella_phage	1.0e-121	89.0
WP_046696313.1\|2091620_2092019_-	hypothetical protein	A0A0R6PK02	Moraxella_phage	5.1e-38	59.1
WP_080946113.1\|2092096_2092432_-\|tail	phage tail protein	A0A0R6PHZ9	Moraxella_phage	1.2e-51	80.7
WP_080948305.1\|2092441_2096134_-	hypothetical protein	A0A0R6PF47	Moraxella_phage	3.7e-143	34.2
WP_046701958.1\|2096164_2096566_-	hypothetical protein	NA	NA	NA	NA
2096387:2096403	attL	NA	NA	NA	NA
WP_046701959.1\|2096610_2096928_-	DUF4035 domain-containing protein	A0A0R6PHY9	Moraxella_phage	3.3e-24	57.3
WP_046701960.1\|2096948_2097272_-	hypothetical protein	A0A0R6PJ73	Moraxella_phage	3.5e-13	38.2
WP_046702144.1\|2097307_2097736_-	hypothetical protein	A0A0R6PKQ7	Moraxella_phage	8.6e-52	73.8
WP_046701961.1\|2097739_2098108_-	DUF3168 domain-containing protein	A0A0R6PKK8	Moraxella_phage	1.6e-25	50.0
WP_046701962.1\|2098131_2098674_-	hypothetical protein	A0A0R6PK38	Moraxella_phage	1.9e-48	54.7
WP_046701963.1\|2098670_2099000_-\|head	phage head closure protein	A0A0R6PCW7	Moraxella_phage	1.2e-32	66.7
WP_046701964.1\|2099016_2099304_-\|head,tail	phage gp6-like head-tail connector protein	A0A0R6PHI1	Moraxella_phage	8.7e-40	82.1
WP_046701965.1\|2099300_2100626_-\|portal	phage portal protein	A0A0R6PGT4	Moraxella_phage	2.0e-208	81.9
WP_046701966.1\|2100900_2102256_-\|capsid	phage major capsid protein	A0A0R6PCM7	Moraxella_phage	5.7e-206	83.1
WP_080949136.1\|2102252_2102888_-	peptidase U35	A0A0R6PGX0	Moraxella_phage	8.0e-78	74.9
WP_046696326.1\|2102955_2103174_-	hypothetical protein	NA	NA	NA	NA
WP_046696327.1\|2103170_2103587_-	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_046702145.1\|2103631_2105374_-\|terminase	terminase large subunit	A0A0R6PH79	Moraxella_phage	3.0e-300	87.6
WP_046696329.1\|2105348_2105708_-	DUF3310 domain-containing protein	A0A0R6PC49	Moraxella_phage	3.4e-41	69.6
WP_046696330.1\|2105691_2105871_-	hypothetical protein	NA	NA	NA	NA
WP_046696331.1\|2105867_2106311_-	hypothetical protein	A0A0R6PGM4	Moraxella_phage	2.4e-36	53.0
WP_046701856.1\|2106427_2106733_-	HNH endonuclease	A0A0R6PH58	Moraxella_phage	1.5e-42	81.8
WP_155399987.1\|2106735_2106888_-	hypothetical protein	A0A0R6PKL5	Moraxella_phage	1.4e-09	60.0
WP_046702146.1\|2107091_2107511_-	hypothetical protein	A0A0R6PGQ4	Moraxella_phage	2.4e-46	66.7
WP_046702147.1\|2107870_2110513_-	hypothetical protein	A0A0R6PCH4	Moraxella_phage	0.0e+00	73.6
WP_046701968.1\|2110581_2110800_-	Cro/Cl family transcriptional regulator	A0A0R6PH31	Moraxella_phage	8.6e-32	91.7
WP_080949138.1\|2110922_2111714_+	hypothetical protein	A0A0R6PHA8	Moraxella_phage	8.8e-50	40.2
WP_155400051.1\|2111757_2112102_+	hypothetical protein	NA	NA	NA	NA
WP_155400052.1\|2112051_2112285_-	hypothetical protein	NA	NA	NA	NA
WP_046701970.1\|2112610_2112838_+	hypothetical protein	NA	NA	NA	NA
WP_046701971.1\|2112839_2113106_-	hypothetical protein	NA	NA	NA	NA
WP_046701972.1\|2113326_2113509_+	hypothetical protein	A0A0R6PHF2	Moraxella_phage	7.7e-10	53.4
WP_046701973.1\|2113505_2113838_+	hypothetical protein	NA	NA	NA	NA
WP_046701974.1\|2113834_2114131_+	hypothetical protein	A0A0R6PGT5	Moraxella_phage	1.1e-34	74.5
WP_080949140.1\|2114130_2114376_+	hypothetical protein	NA	NA	NA	NA
WP_046696343.1\|2114372_2114711_+	hypothetical protein	NA	NA	NA	NA
WP_080948308.1\|2114722_2115553_+	DUF2303 family protein	NA	NA	NA	NA
WP_046699393.1\|2115606_2115831_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_046699394.1\|2115827_2117042_-\|integrase	integrase family protein	A0A0R6PIF4	Moraxella_phage	1.1e-102	48.4
WP_080946119.1\|2117425_2118328_-	cytochrome-c peroxidase	NA	NA	NA	NA
WP_080946120.1\|2118324_2118531_-	hypothetical protein	NA	NA	NA	NA
WP_046697158.1\|2118656_2121293_-	type I DNA topoisomerase	A0A1V0SB35	Catovirus	2.7e-95	34.9
WP_046699396.1\|2121457_2122030_-	hypothetical protein	NA	NA	NA	NA
WP_080946184.1\|2122037_2124836_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.1e-70	43.7
WP_155400220.1\|2124910_2125087_-	hypothetical protein	NA	NA	NA	NA
WP_046697161.1\|2125130_2126069_+	thioredoxin-disulfide reductase	A0A1V0SIN1	Klosneuvirus	2.1e-58	41.9
WP_155400221.1\|2126686_2127139_+	hypothetical protein	NA	NA	NA	NA
WP_155400222.1\|2127172_2127607_+	hypothetical protein	NA	NA	NA	NA
WP_046699397.1\|2127610_2128852_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_155400085.1\|2129134_2129959_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
2136874:2136890	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP011378.1|WP_046697119.1|1941779_1942739_+|hypothetical-protein

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Acr_ID: NZ_CP011378.1|WP_046699157.1|1997633_1997912_+|anti-CRISPR-N-acetyltransferase-AcrVA5

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Acr_ID: NZ_CP011378.1|WP_046699156.1|1997916_1998621_+|anti-CRISPR-protein-AcrVA4

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Acr_ID: NZ_CP011378.1|WP_046699106.1|2030473_2030686_+|hypothetical-protein

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Acr_ID: NZ_CP011378.1|WP_046702127.1|2033687_2034188_-|hypothetical-protein

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Acr_ID: NZ_CP011378.1|WP_155400218.1|2047313_2047685_+|hypothetical-protein

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Acr_ID: NZ_CP011378.1|WP_046702136.1|2047824_2048217_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP011378.1|WP_046697119.1|1941779_1942739_+|hypothetical-protein

1941779_1942739_+

319 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|34	1.0	1	1.0

HTH_XRE

Identity	Hit_domain_coverage
NA	NA

NZ_CP011378.1|WP_046699157.1|1997633_1997912_+|anti-CRISPR-N-acetyltransferase-AcrVA5

1997633_1997912_+

92 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|38	1.0	1	1.0

1995925-2129959

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP011378_1	TypeV-A,TypeI-A	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	2042507-2042535	1
NZ_CP011378_1	TypeV-A,TypeI-A	1.11\|51251\|28\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51251-51278	28	2019026-2019053	0

1. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2042507-2042535, mismatch: 1

tgggaatattatagcagatttatttaatt	CRISPR spacer
tggggatattatagcagatttatttaatt	Protospacer
****.************************

2. spacer 1.11|51251|28|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2019026-2019053, mismatch: 0

ctaaatgccgtgtcgttttggttcttat	CRISPR spacer
ctaaatgccgtgtcgttttggttcttat	Protospacer
****************************

NZ_CP011378.1|WP_046699156.1|1997916_1998621_+|anti-CRISPR-protein-AcrVA4

1997916_1998621_+

234 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|37	1.0	1	1.0

1995925-2129959

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP011378_1	TypeV-A,TypeI-A	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	2042507-2042535	1
NZ_CP011378_1	TypeV-A,TypeI-A	1.11\|51251\|28\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51251-51278	28	2019026-2019053	0

1. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2042507-2042535, mismatch: 1

tgggaatattatagcagatttatttaatt	CRISPR spacer
tggggatattatagcagatttatttaatt	Protospacer
****.************************

2. spacer 1.11|51251|28|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2019026-2019053, mismatch: 0

ctaaatgccgtgtcgttttggttcttat	CRISPR spacer
ctaaatgccgtgtcgttttggttcttat	Protospacer
****************************

NZ_CP011378.1|WP_046699106.1|2030473_2030686_+|hypothetical-protein

2030473_2030686_+

70 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.4	0.9482758620689655

1995925-2129959

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP011378_1	TypeV-A,TypeI-A	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	2042507-2042535	1
NZ_CP011378_1	TypeV-A,TypeI-A	1.11\|51251\|28\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51251-51278	28	2019026-2019053	0

1. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2042507-2042535, mismatch: 1

tgggaatattatagcagatttatttaatt	CRISPR spacer
tggggatattatagcagatttatttaatt	Protospacer
****.************************

2. spacer 1.11|51251|28|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2019026-2019053, mismatch: 0

ctaaatgccgtgtcgttttggttcttat	CRISPR spacer
ctaaatgccgtgtcgttttggttcttat	Protospacer
****************************

NZ_CP011378.1|WP_046702127.1|2033687_2034188_-|hypothetical-protein

2033687_2034188_-

166 aa aa

HTH_OrfB_IS605,HTH_XRE

Identity	Hit_domain_coverage
0.5434782608695652	0.9787234042553191

1995925-2129959

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP011378_1	TypeV-A,TypeI-A	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	2042507-2042535	1
NZ_CP011378_1	TypeV-A,TypeI-A	1.11\|51251\|28\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51251-51278	28	2019026-2019053	0

1. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2042507-2042535, mismatch: 1

tgggaatattatagcagatttatttaatt	CRISPR spacer
tggggatattatagcagatttatttaatt	Protospacer
****.************************

2. spacer 1.11|51251|28|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2019026-2019053, mismatch: 0

ctaaatgccgtgtcgttttggttcttat	CRISPR spacer
ctaaatgccgtgtcgttttggttcttat	Protospacer
****************************

NZ_CP011378.1|WP_155400218.1|2047313_2047685_+|hypothetical-protein

2047313_2047685_+

123 aa aa

HTH_OrfB_IS605

Identity	Hit_domain_coverage
0.5434782608695652	0.9787234042553191

1995925-2129959

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP011378_1	TypeV-A,TypeI-A	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	2042507-2042535	1
NZ_CP011378_1	TypeV-A,TypeI-A	1.11\|51251\|28\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51251-51278	28	2019026-2019053	0

1. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2042507-2042535, mismatch: 1

tgggaatattatagcagatttatttaatt	CRISPR spacer
tggggatattatagcagatttatttaatt	Protospacer
****.************************

2. spacer 1.11|51251|28|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2019026-2019053, mismatch: 0

ctaaatgccgtgtcgttttggttcttat	CRISPR spacer
ctaaatgccgtgtcgttttggttcttat	Protospacer
****************************

NZ_CP011378.1|WP_046702136.1|2047824_2048217_+|hypothetical-protein

2047824_2048217_+

130 aa aa

HTH_OrfB_IS605

Identity	Hit_domain_coverage
0.5434782608695652	0.9787234042553191

1995925-2129959

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP011378_1	TypeV-A,TypeI-A	1.9\|51122\|29\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51122-51150	29	2042507-2042535	1
NZ_CP011378_1	TypeV-A,TypeI-A	1.11\|51251\|28\|NZ_CP011378\|PILER-CR,CRISPRCasFinder,CRT	51251-51278	28	2019026-2019053	0

1. spacer 1.9|51122|29|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2042507-2042535, mismatch: 1

tgggaatattatagcagatttatttaatt	CRISPR spacer
tggggatattatagcagatttatttaatt	Protospacer
****.************************

2. spacer 1.11|51251|28|NZ_CP011378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011378 position: 2019026-2019053, mismatch: 0

ctaaatgccgtgtcgttttggttcttat	CRISPR spacer
ctaaatgccgtgtcgttttggttcttat	Protospacer
****************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011378

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information