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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011295 Rhodococcus erythropolis strain BG43 chromosome, complete genome 5 crisprs WYL,cas3,csa3,cas4,DEDDh,DinG,Cas9_archaeal,RT 0 5 2 0
NZ_CP011297 Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence 0 crisprs csf1gr8,csf4gr11,csf2gr7,csf3gr5,PD-DExK 0 0 1 0
NZ_CP011298 Rhodococcus erythropolis strain BG43 plasmid pRSLBG43, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP011296 Rhodococcus erythropolis strain BG43 plasmid pRLCBG43, complete sequence 0 crisprs NA 0 0 22 0

Results visualization

1. NZ_CP011295
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011295_1 128287-128398 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011295_2 2251525-2251610 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011295_3 3128483-3128979 Orphan NA
7 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011295_4 3219129-3219208 Unclear NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011295_5 4002654-4002789 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP045217 Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence 26929-26956 4 0.857
NZ_CP011295_3 3.6|3128854|28|NZ_CP011295|CRT 3128854-3128881 28 NC_013859 Azospirillum sp. B510 plasmid pAB510e, complete sequence 140594-140621 5 0.821
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP045217 Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence 26929-26956 6 0.786
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP009295 Novosphingobium pentaromativorans US6-1 plasmid pLA5, complete sequence 47622-47649 6 0.786
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP007515 Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence 181072-181099 6 0.786
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP032343 Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence 9449-9476 6 0.786
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP032343 Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence 644229-644256 6 0.786
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP012917 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence 83965-83992 6 0.786
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP045217 Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence 26929-26956 6 0.786
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP009295 Novosphingobium pentaromativorans US6-1 plasmid pLA5, complete sequence 47622-47649 6 0.786
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP007515 Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence 181072-181099 6 0.786
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP032343 Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence 9449-9476 6 0.786
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP032343 Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence 644229-644256 6 0.786
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP012917 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence 83965-83992 6 0.786
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 801163-801190 6 0.786
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 803006-803033 6 0.786
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP007515 Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence 181072-181099 6 0.786
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP046574 Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence 439023-439050 6 0.786
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP046575 Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence 4237-4264 6 0.786
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP017782 Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence 176406-176433 7 0.75
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP022366 Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence 271172-271199 7 0.75
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 801163-801190 7 0.75
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 803006-803033 7 0.75
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP022999 Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence 597206-597233 7 0.75
NZ_CP011295_3 3.3|3128674|28|NZ_CP011295|CRT 3128674-3128701 28 NZ_CP024200 Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence 489184-489211 7 0.75
NZ_CP011295_3 3.3|3128674|28|NZ_CP011295|CRT 3128674-3128701 28 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 4806917-4806944 7 0.75
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP017782 Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence 176406-176433 7 0.75
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP022366 Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence 271172-271199 7 0.75
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 801163-801190 7 0.75
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 803006-803033 7 0.75
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP022999 Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence 597206-597233 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP017244 Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence 1278265-1278292 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP017105 Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence 906855-906882 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 CP006880 Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence 1065549-1065576 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP012255 Cronobacter sakazakii strain NCTC 8155 plasmid pCS2, complete sequence 76422-76449 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP049260 Cronobacter sakazakii strain CS-931 plasmid pCsaCS931b, complete sequence 91282-91309 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NC_020263 Cronobacter sakazakii SP291 plasmid pSP291-1, complete sequence 89846-89873 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP011048 Cronobacter sakazakii strain ATCC 29544 plasmid CSK29544_1p, complete sequence 8596-8623 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP009295 Novosphingobium pentaromativorans US6-1 plasmid pLA5, complete sequence 47622-47649 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP042265 Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence 402392-402419 7 0.75
NZ_CP011295_3 3.7|3128917|28|NZ_CP011295|CRT 3128917-3128944 28 NZ_CP022999 Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence 597206-597233 7 0.75
NZ_CP011295_3 3.2|3128611|28|NZ_CP011295|CRT 3128611-3128638 28 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 285507-285534 8 0.714
NZ_CP011295_3 3.5|3128791|28|NZ_CP011295|CRT 3128791-3128818 28 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 285507-285534 8 0.714

1. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP045217 (Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.857

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
atcgccgcggctctcgccgtcacgatcg	Protospacer
 .**********************.*.*

2. spacer 3.6|3128854|28|NZ_CP011295|CRT matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 5, identity: 0.821

tccggtcgaggggcggctgtcgcggttg	CRISPR spacer
gccggtcgatgggcggctgtggcgcctg	Protospacer
 ******** ********** *** .**

3. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP045217 (Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
atcgccgcggctctcgccgtcacgatcg	Protospacer
 .**********************... 

4. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP009295 (Novosphingobium pentaromativorans US6-1 plasmid pLA5, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
gccaccgcggctctcgccgtcatcgcga	Protospacer
 **.******************. **  

5. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
cccgtcgcggctctcgccgtcccgatct	Protospacer
.***.**************** **...*

6. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ccggccgcggcgctcgccgccacggcag	Protospacer
.* ******** *******.******  

7. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ccggccgcggcgctcgccgccacggcag	Protospacer
.* ******** *******.******  

8. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ccggccgcggcgctcgccgccacggcag	Protospacer
.* ******** *******.******  

9. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP045217 (Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
atcgccgcggctctcgccgtcacgatcg	Protospacer
 .**********************... 

10. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP009295 (Novosphingobium pentaromativorans US6-1 plasmid pLA5, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
gccaccgcggctctcgccgtcatcgcga	Protospacer
 **.******************. **  

11. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
cccgtcgcggctctcgccgtcccgatct	Protospacer
.***.**************** **...*

12. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ccggccgcggcgctcgccgccacggcag	Protospacer
.* ******** *******.******  

13. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ccggccgcggcgctcgccgccacggcag	Protospacer
.* ******** *******.******  

14. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ccggccgcggcgctcgccgccacggcag	Protospacer
.* ******** *******.******  

15. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
agcgccgcgacgctcgccgtcacggtca	Protospacer
  *******.* **************..

16. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
ctcgccgcggcgctcgccgtcgcggtgc	Protospacer
..********* *********.****  

17. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
cccgtcgcggctctcgccgtcccgatct	Protospacer
.***.**************** **.*. 

18. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP046574 (Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gcggccgcggtcctcgccgtcacggtgt	Protospacer
 * *******..**************  

19. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 6, identity: 0.786

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gcggccgcggtcctcgccgtcacggtgt	Protospacer
 * *******..**************  

20. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP017782 (Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
gatgccgcgccgctcgccgtcacggccc	Protospacer
  .****** * **************..

21. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
gtggccgcggctatcgccttcacggcgg	Protospacer
 . ********* ***** *******  

22. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
agcgccgcgacgctcgccgtcacggtca	Protospacer
  *******.* *************.. 

23. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ctcgccgcggcgctcgccgtcgcggtgc	Protospacer
..********* *********.***. .

24. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
cgcgccgaagctctcgccgtcacggacc	Protospacer
. ***** .**************** ..

25. spacer 3.3|3128674|28|NZ_CP011295|CRT matches to NZ_CP024200 (Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence) position: , mismatch: 7, identity: 0.75

acccgtcgacgggcggctgtcgcggtct	CRISPR spacer
ataggtcgacgggcggcggtcgcggaaa	Protospacer
*.  ************* *******   

26. spacer 3.3|3128674|28|NZ_CP011295|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.75

acccgtcgacgggcggctgtcgcggtct	CRISPR spacer
cggcgtcgacgcgcgcctgtcgcggtac	Protospacer
   ******** *** ********** .

27. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP017782 (Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
gatgccgcgccgctcgccgtcacggccc	Protospacer
  .****** * **************..

28. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
gtggccgcggctatcgccttcacggcgg	Protospacer
 . ********* ***** *******  

29. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
agcgccgcgacgctcgccgtcacggtca	Protospacer
  *******.* *************.. 

30. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ctcgccgcggcgctcgccgtcgcggtgc	Protospacer
..********* *********.***. .

31. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
cgcgccgaagctctcgccgtcacggacc	Protospacer
. ***** .**************** ..

32. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gaaagcgcggctctcgtcgtcacggttc	Protospacer
   . ***********.********** 

33. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gaacgcgcggctctcgtcgtcacggttc	Protospacer
     ***********.********** 

34. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gaaagcgcggctctcgtcgtcacggttc	Protospacer
   . ***********.********** 

35. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP012255 (Cronobacter sakazakii strain NCTC 8155 plasmid pCS2, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gatttcgcgtttctcgccgtcacggttg	Protospacer
  . .**** .*****************

36. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP049260 (Cronobacter sakazakii strain CS-931 plasmid pCsaCS931b, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gatttcgcgtttctcgccgtcacggttg	Protospacer
  . .**** .*****************

37. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NC_020263 (Cronobacter sakazakii SP291 plasmid pSP291-1, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gatttcgcgtttctcgccgtcacggttg	Protospacer
  . .**** .*****************

38. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP011048 (Cronobacter sakazakii strain ATCC 29544 plasmid CSK29544_1p, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gatttcgcgtttctcgccgtcacggttg	Protospacer
  . .**** .*****************

39. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP009295 (Novosphingobium pentaromativorans US6-1 plasmid pLA5, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
gccaccgcggctctcgccgtcatcgcga	Protospacer
 **.******************. *. .

40. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
aaatgcgcggttctcgccgccacggttg	Protospacer
     *****.********.********

41. spacer 3.7|3128917|28|NZ_CP011295|CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 7, identity: 0.75

tccgccgcggctctcgccgtcacggttg	CRISPR spacer
cgcgccgaagctctcgccgtcacggacc	Protospacer
. ***** .**************** . 

42. spacer 3.2|3128611|28|NZ_CP011295|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.714

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ctgctcgcggcgctcgccgtcacggcgc	Protospacer
..  .****** ************** .

43. spacer 3.5|3128791|28|NZ_CP011295|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.714

tccgccgcggctctcgccgtcacggctt	CRISPR spacer
ctgctcgcggcgctcgccgtcacggcgc	Protospacer
..  .****** ************** .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2429870 : 2436173 7 Lactobacillus_phage(16.67%) NA NA
DBSCAN-SWA_2 5009813 : 5033896 29 Mycobacterium_phage(26.32%) portal,integrase attL 5016336:5016350|attR 5035111:5035125
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP011297
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 115987 : 140358 33 Mycobacterium_phage(66.67%) integrase,transposase,protease attL 114347:114361|attR 145487:145501
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP011296
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 5142 5 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_2 9674 : 11405 1 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_3 16269 : 23125 6 Acinetobacter_phage(33.33%) transposase NA
DBSCAN-SWA_4 42963 : 43737 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_5 47586 : 48519 1 Spiroplasma_virus(100.0%) transposase NA
DBSCAN-SWA_6 66115 : 69322 2 Pandoravirus(50.0%) transposase NA
DBSCAN-SWA_7 73600 : 74509 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_8 81794 : 83411 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_9 94018 : 95383 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_10 105286 : 111263 3 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_11 132038 : 135651 3 Acinetobacter_phage(66.67%) NA NA
DBSCAN-SWA_12 139286 : 140801 2 Puniceispirillum_phage(50.0%) transposase NA
DBSCAN-SWA_13 144342 : 147081 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_14 150495 : 154727 6 Gordonia_phage(33.33%) NA NA
DBSCAN-SWA_15 159316 : 161395 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_16 168802 : 170416 1 Corynebacterium_phage(100.0%) NA NA
DBSCAN-SWA_17 174003 : 178457 6 Gordonia_phage(50.0%) NA NA
DBSCAN-SWA_18 183094 : 185095 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_19 193596 : 196784 3 Ochrobactrum_phage(50.0%) NA NA
DBSCAN-SWA_20 208039 : 208792 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_21 221318 : 222881 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_22 234290 : 235445 1 Pandoravirus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage