Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010811 Vibrio cholerae strain 1154-74 chromosome, complete genome 1 crisprs cas3,DEDDh,DinG,csx1,csa3,cas6f 0 1 6 0

Results visualization

1. NZ_CP010811
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010811_1 3561855-3562098 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010811_1 1.1|3561904|37|NZ_CP010811|PILER-CR 3561904-3561940 37 NC_049942 Escherichia phage JLK-2012, complete sequence 23524-23560 4 0.892
NZ_CP010811_1 1.1|3561904|37|NZ_CP010811|PILER-CR 3561904-3561940 37 NC_021742 Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence 35428-35464 4 0.892

1. spacer 1.1|3561904|37|NZ_CP010811|PILER-CR matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
caggtcgccagttcgattccggtagccggcaccatat	Protospacer
.*********************.***********. *

2. spacer 1.1|3561904|37|NZ_CP010811|PILER-CR matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
taggtcaccagttcgattccggtagccggcaccaatc	Protospacer
******.***************.*********** *.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 661605 : 668222 7 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_2 1735693 : 1799578 88 Vibrio_phage(53.12%) capsid,terminase,tail,plate,integrase,portal,transposase,tRNA attL 1751483:1751497|attR 1801690:1801704
DBSCAN-SWA_3 2643792 : 2650802 9 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_4 2713888 : 2756318 54 Staphylococcus_prophage(42.86%) transposase,protease NA
DBSCAN-SWA_5 3260762 : 3267955 9 Anguillid_herpesvirus(16.67%) NA NA
DBSCAN-SWA_6 3501092 : 3508317 6 uncultured_Mediterranean_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage